Multiple sequence alignment - TraesCS5D01G068300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G068300 chr5D 100.000 2705 0 0 1 2705 64272226 64274930 0.000000e+00 4996.0
1 TraesCS5D01G068300 chr5D 95.159 1570 65 2 495 2064 68211940 68210382 0.000000e+00 2468.0
2 TraesCS5D01G068300 chr5D 93.893 1179 47 9 495 1673 558942305 558941152 0.000000e+00 1755.0
3 TraesCS5D01G068300 chr5D 95.833 504 13 1 1 496 68212487 68211984 0.000000e+00 808.0
4 TraesCS5D01G068300 chr5D 95.573 497 13 3 9 496 558942845 558942349 0.000000e+00 787.0
5 TraesCS5D01G068300 chr5D 93.317 404 26 1 1661 2064 558933168 558932766 1.790000e-166 595.0
6 TraesCS5D01G068300 chr5D 88.144 194 19 3 1873 2064 21248438 21248247 7.530000e-56 228.0
7 TraesCS5D01G068300 chr5D 87.500 192 24 0 1873 2064 447941605 447941414 3.510000e-54 222.0
8 TraesCS5D01G068300 chr5D 95.455 44 2 0 2662 2705 517855185 517855142 1.340000e-08 71.3
9 TraesCS5D01G068300 chr7D 95.969 1538 59 3 495 2032 25224216 25225750 0.000000e+00 2494.0
10 TraesCS5D01G068300 chr7D 94.316 1038 54 2 495 1527 90261127 90262164 0.000000e+00 1585.0
11 TraesCS5D01G068300 chr7D 95.842 505 12 2 1 496 25223668 25224172 0.000000e+00 808.0
12 TraesCS5D01G068300 chr7D 96.175 366 14 0 1524 1889 90271297 90271662 1.390000e-167 599.0
13 TraesCS5D01G068300 chr7D 97.626 337 8 0 1 337 90260534 90260870 1.810000e-161 579.0
14 TraesCS5D01G068300 chr7D 94.470 217 7 2 284 496 90260864 90261079 2.010000e-86 329.0
15 TraesCS5D01G068300 chr7D 97.253 182 5 0 1883 2064 90306468 90306649 2.620000e-80 309.0
16 TraesCS5D01G068300 chr7D 95.652 46 2 0 2660 2705 246022916 246022871 1.040000e-09 75.0
17 TraesCS5D01G068300 chr6D 92.013 914 60 3 496 1396 431115165 431114252 0.000000e+00 1271.0
18 TraesCS5D01G068300 chr6D 89.495 495 17 11 1 494 431115686 431115226 6.450000e-166 593.0
19 TraesCS5D01G068300 chr6D 88.021 192 23 0 1873 2064 80634450 80634641 7.530000e-56 228.0
20 TraesCS5D01G068300 chr5B 89.704 641 43 8 644 1269 531216934 531217566 0.000000e+00 797.0
21 TraesCS5D01G068300 chr1D 85.422 391 35 9 1019 1396 265555831 265556212 1.170000e-103 387.0
22 TraesCS5D01G068300 chr1D 87.931 58 5 2 2649 2705 140136954 140137010 1.740000e-07 67.6
23 TraesCS5D01G068300 chr5A 84.478 393 31 9 1019 1396 38100515 38100138 7.120000e-96 361.0
24 TraesCS5D01G068300 chr5A 89.796 49 5 0 2245 2293 401153323 401153275 2.250000e-06 63.9
25 TraesCS5D01G068300 chr6A 87.705 244 30 0 1821 2064 115465376 115465133 4.410000e-73 285.0
26 TraesCS5D01G068300 chr6A 89.238 223 14 6 1183 1396 3208327 3208106 1.230000e-68 270.0
27 TraesCS5D01G068300 chrUn 88.542 192 22 0 1873 2064 94210048 94210239 1.620000e-57 233.0
28 TraesCS5D01G068300 chr2D 93.478 46 3 0 2660 2705 241491386 241491341 4.830000e-08 69.4
29 TraesCS5D01G068300 chr2B 93.478 46 3 0 2660 2705 476399075 476399030 4.830000e-08 69.4
30 TraesCS5D01G068300 chr6B 87.931 58 6 1 2649 2705 474431849 474431906 1.740000e-07 67.6
31 TraesCS5D01G068300 chr3A 91.304 46 4 0 2660 2705 529671312 529671267 2.250000e-06 63.9
32 TraesCS5D01G068300 chr2A 88.889 54 3 3 2653 2705 553437170 553437119 2.250000e-06 63.9
33 TraesCS5D01G068300 chr1B 83.333 66 7 4 2642 2705 177835906 177835843 1.050000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G068300 chr5D 64272226 64274930 2704 False 4996 4996 100.000000 1 2705 1 chr5D.!!$F1 2704
1 TraesCS5D01G068300 chr5D 68210382 68212487 2105 True 1638 2468 95.496000 1 2064 2 chr5D.!!$R5 2063
2 TraesCS5D01G068300 chr5D 558941152 558942845 1693 True 1271 1755 94.733000 9 1673 2 chr5D.!!$R6 1664
3 TraesCS5D01G068300 chr7D 25223668 25225750 2082 False 1651 2494 95.905500 1 2032 2 chr7D.!!$F3 2031
4 TraesCS5D01G068300 chr7D 90260534 90262164 1630 False 831 1585 95.470667 1 1527 3 chr7D.!!$F4 1526
5 TraesCS5D01G068300 chr6D 431114252 431115686 1434 True 932 1271 90.754000 1 1396 2 chr6D.!!$R1 1395
6 TraesCS5D01G068300 chr5B 531216934 531217566 632 False 797 797 89.704000 644 1269 1 chr5B.!!$F1 625

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
974 1110 0.179073 CCAATGGTACCGGAGCTGAG 60.179 60.0 9.46 0.0 0.0 3.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2279 2428 0.103208 GGAACGTCCGATCTGCTGAT 59.897 55.0 5.69 5.69 35.26 2.9 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
165 167 3.321111 ACTCGTTCAGTGTGTGTAATCCT 59.679 43.478 0.00 0.00 32.26 3.24
187 190 8.488651 TCCTAGCTAGCTTAATGTTGTAAAAC 57.511 34.615 24.88 0.00 0.00 2.43
274 277 3.678289 TGTTCACCATCAGGATTCACAG 58.322 45.455 0.00 0.00 38.69 3.66
317 320 2.029838 AAGATAGAAAGCACAGCCGG 57.970 50.000 0.00 0.00 0.00 6.13
441 495 5.201713 TGCTTCGACTGATAGATAAAGGG 57.798 43.478 0.00 0.00 0.00 3.95
587 707 3.627395 ATCGGCAGAAACTGGATAACA 57.373 42.857 0.00 0.00 31.21 2.41
781 904 9.979897 AATATGCATGGCTATCTAATCCTTAAA 57.020 29.630 10.16 0.00 0.00 1.52
974 1110 0.179073 CCAATGGTACCGGAGCTGAG 60.179 60.000 9.46 0.00 0.00 3.35
1654 1803 2.254546 ATGGACAACAGAAAGCGACA 57.745 45.000 0.00 0.00 0.00 4.35
1658 1807 1.873591 GACAACAGAAAGCGACACCAT 59.126 47.619 0.00 0.00 0.00 3.55
1669 1818 1.269309 GCGACACCATAGCTAGACCAG 60.269 57.143 0.00 0.00 0.00 4.00
1697 1846 2.680352 ACCAGATCGGCCGACAGT 60.680 61.111 33.75 21.83 39.03 3.55
1740 1889 5.219633 GCCGAATAGAAAACAAAGAAAGCA 58.780 37.500 0.00 0.00 0.00 3.91
1749 1898 3.070429 ACAAAGAAAGCAACGCAAGAG 57.930 42.857 0.00 0.00 43.62 2.85
1759 1908 0.663153 AACGCAAGAGCTGAACCAAC 59.337 50.000 0.00 0.00 43.62 3.77
1760 1909 1.205064 CGCAAGAGCTGAACCAACG 59.795 57.895 0.00 0.00 43.02 4.10
1907 2056 1.202582 CCAAAACAACCGTCACACCAA 59.797 47.619 0.00 0.00 0.00 3.67
1915 2064 4.177026 CAACCGTCACACCAATTCAAAAA 58.823 39.130 0.00 0.00 0.00 1.94
1985 2134 2.159382 CCAAAGAAATACACGTGCCCT 58.841 47.619 17.22 0.00 0.00 5.19
2064 2213 2.903135 GCTCCCAGATATAGAGGCTTGT 59.097 50.000 0.00 0.00 0.00 3.16
2065 2214 3.326297 GCTCCCAGATATAGAGGCTTGTT 59.674 47.826 0.00 0.00 0.00 2.83
2066 2215 4.202409 GCTCCCAGATATAGAGGCTTGTTT 60.202 45.833 0.00 0.00 0.00 2.83
2067 2216 5.688766 GCTCCCAGATATAGAGGCTTGTTTT 60.689 44.000 0.00 0.00 0.00 2.43
2068 2217 6.464465 GCTCCCAGATATAGAGGCTTGTTTTA 60.464 42.308 0.00 0.00 0.00 1.52
2069 2218 7.446106 TCCCAGATATAGAGGCTTGTTTTAA 57.554 36.000 0.00 0.00 0.00 1.52
2070 2219 8.045720 TCCCAGATATAGAGGCTTGTTTTAAT 57.954 34.615 0.00 0.00 0.00 1.40
2071 2220 8.157476 TCCCAGATATAGAGGCTTGTTTTAATC 58.843 37.037 0.00 0.00 0.00 1.75
2072 2221 8.160106 CCCAGATATAGAGGCTTGTTTTAATCT 58.840 37.037 0.00 0.00 0.00 2.40
2073 2222 9.566432 CCAGATATAGAGGCTTGTTTTAATCTT 57.434 33.333 0.00 0.00 0.00 2.40
2101 2250 7.944729 ACATTTGTCTACTTAATGGCAATCT 57.055 32.000 0.00 0.00 34.40 2.40
2102 2251 8.353423 ACATTTGTCTACTTAATGGCAATCTT 57.647 30.769 0.00 0.00 34.40 2.40
2103 2252 8.462016 ACATTTGTCTACTTAATGGCAATCTTC 58.538 33.333 0.00 0.00 34.40 2.87
2104 2253 7.994425 TTTGTCTACTTAATGGCAATCTTCA 57.006 32.000 0.00 0.00 0.00 3.02
2105 2254 7.994425 TTGTCTACTTAATGGCAATCTTCAA 57.006 32.000 0.00 0.00 0.00 2.69
2106 2255 7.994425 TGTCTACTTAATGGCAATCTTCAAA 57.006 32.000 0.00 0.00 0.00 2.69
2107 2256 8.044060 TGTCTACTTAATGGCAATCTTCAAAG 57.956 34.615 0.00 0.00 0.00 2.77
2108 2257 7.882791 TGTCTACTTAATGGCAATCTTCAAAGA 59.117 33.333 0.00 0.00 39.78 2.52
2109 2258 8.730680 GTCTACTTAATGGCAATCTTCAAAGAA 58.269 33.333 0.00 0.00 38.77 2.52
2110 2259 8.730680 TCTACTTAATGGCAATCTTCAAAGAAC 58.269 33.333 0.00 0.00 38.77 3.01
2111 2260 6.381801 ACTTAATGGCAATCTTCAAAGAACG 58.618 36.000 0.00 0.00 38.77 3.95
2112 2261 4.853924 AATGGCAATCTTCAAAGAACGT 57.146 36.364 0.00 0.00 38.77 3.99
2113 2262 3.624326 TGGCAATCTTCAAAGAACGTG 57.376 42.857 0.00 0.00 38.77 4.49
2114 2263 3.210227 TGGCAATCTTCAAAGAACGTGA 58.790 40.909 0.00 0.00 38.77 4.35
2115 2264 3.003275 TGGCAATCTTCAAAGAACGTGAC 59.997 43.478 0.00 0.00 38.77 3.67
2116 2265 3.251004 GGCAATCTTCAAAGAACGTGACT 59.749 43.478 0.00 0.00 38.77 3.41
2117 2266 4.261197 GGCAATCTTCAAAGAACGTGACTT 60.261 41.667 0.00 0.00 38.77 3.01
2118 2267 4.672413 GCAATCTTCAAAGAACGTGACTTG 59.328 41.667 8.62 3.77 38.77 3.16
2119 2268 5.730568 GCAATCTTCAAAGAACGTGACTTGT 60.731 40.000 8.62 0.00 38.77 3.16
2120 2269 6.511121 GCAATCTTCAAAGAACGTGACTTGTA 60.511 38.462 8.62 0.00 38.77 2.41
2121 2270 5.961395 TCTTCAAAGAACGTGACTTGTAC 57.039 39.130 8.62 0.00 30.73 2.90
2122 2271 4.501559 TCTTCAAAGAACGTGACTTGTACG 59.498 41.667 8.62 0.00 46.31 3.67
2123 2272 4.031418 TCAAAGAACGTGACTTGTACGA 57.969 40.909 8.62 0.00 43.82 3.43
2124 2273 4.422840 TCAAAGAACGTGACTTGTACGAA 58.577 39.130 8.62 0.00 43.82 3.85
2125 2274 4.863689 TCAAAGAACGTGACTTGTACGAAA 59.136 37.500 8.62 0.00 43.82 3.46
2126 2275 5.521010 TCAAAGAACGTGACTTGTACGAAAT 59.479 36.000 8.62 0.00 43.82 2.17
2127 2276 5.978934 AAGAACGTGACTTGTACGAAATT 57.021 34.783 4.43 0.00 43.82 1.82
2128 2277 7.222417 TCAAAGAACGTGACTTGTACGAAATTA 59.778 33.333 8.62 0.00 43.82 1.40
2129 2278 7.467557 AAGAACGTGACTTGTACGAAATTAA 57.532 32.000 4.43 0.00 43.82 1.40
2130 2279 7.101993 AGAACGTGACTTGTACGAAATTAAG 57.898 36.000 4.43 0.00 43.82 1.85
2131 2280 6.919662 AGAACGTGACTTGTACGAAATTAAGA 59.080 34.615 4.43 0.00 43.82 2.10
2132 2281 7.597743 AGAACGTGACTTGTACGAAATTAAGAT 59.402 33.333 4.43 0.00 43.82 2.40
2133 2282 7.274442 ACGTGACTTGTACGAAATTAAGATC 57.726 36.000 4.43 0.00 43.82 2.75
2134 2283 6.309737 ACGTGACTTGTACGAAATTAAGATCC 59.690 38.462 4.43 0.00 43.82 3.36
2135 2284 6.309494 CGTGACTTGTACGAAATTAAGATCCA 59.691 38.462 0.00 0.00 43.82 3.41
2136 2285 7.148705 CGTGACTTGTACGAAATTAAGATCCAA 60.149 37.037 0.00 0.00 43.82 3.53
2137 2286 7.955864 GTGACTTGTACGAAATTAAGATCCAAC 59.044 37.037 0.00 0.00 0.00 3.77
2138 2287 7.057149 ACTTGTACGAAATTAAGATCCAACG 57.943 36.000 0.00 0.00 0.00 4.10
2139 2288 6.091713 ACTTGTACGAAATTAAGATCCAACGG 59.908 38.462 0.00 0.00 0.00 4.44
2140 2289 4.330620 TGTACGAAATTAAGATCCAACGGC 59.669 41.667 0.00 0.00 0.00 5.68
2141 2290 3.606687 ACGAAATTAAGATCCAACGGCT 58.393 40.909 0.00 0.00 0.00 5.52
2142 2291 4.007659 ACGAAATTAAGATCCAACGGCTT 58.992 39.130 0.00 0.00 0.00 4.35
2143 2292 4.094442 ACGAAATTAAGATCCAACGGCTTC 59.906 41.667 0.00 0.00 0.00 3.86
2144 2293 4.094294 CGAAATTAAGATCCAACGGCTTCA 59.906 41.667 0.00 0.00 0.00 3.02
2145 2294 5.567138 AAATTAAGATCCAACGGCTTCAG 57.433 39.130 0.00 0.00 0.00 3.02
2146 2295 2.024176 TAAGATCCAACGGCTTCAGC 57.976 50.000 0.00 0.00 41.14 4.26
2147 2296 1.021390 AAGATCCAACGGCTTCAGCG 61.021 55.000 0.00 0.00 43.26 5.18
2148 2297 3.100862 GATCCAACGGCTTCAGCGC 62.101 63.158 0.00 0.00 43.26 5.92
2155 2304 3.446570 GGCTTCAGCGCCTGCAAT 61.447 61.111 2.29 0.00 46.63 3.56
2156 2305 2.114670 GGCTTCAGCGCCTGCAATA 61.115 57.895 2.29 0.00 46.63 1.90
2157 2306 1.354506 GCTTCAGCGCCTGCAATAG 59.645 57.895 2.29 0.00 46.23 1.73
2158 2307 1.354506 CTTCAGCGCCTGCAATAGC 59.645 57.895 2.29 0.00 46.23 2.97
2178 2327 4.342352 GCAATACTACTTGCTTTCGCTT 57.658 40.909 1.72 0.00 46.32 4.68
2179 2328 4.723248 GCAATACTACTTGCTTTCGCTTT 58.277 39.130 1.72 0.00 46.32 3.51
2180 2329 4.788609 GCAATACTACTTGCTTTCGCTTTC 59.211 41.667 1.72 0.00 46.32 2.62
2181 2330 5.390991 GCAATACTACTTGCTTTCGCTTTCT 60.391 40.000 1.72 0.00 46.32 2.52
2182 2331 6.603095 CAATACTACTTGCTTTCGCTTTCTT 58.397 36.000 0.00 0.00 36.97 2.52
2183 2332 6.803154 ATACTACTTGCTTTCGCTTTCTTT 57.197 33.333 0.00 0.00 36.97 2.52
2184 2333 7.900782 ATACTACTTGCTTTCGCTTTCTTTA 57.099 32.000 0.00 0.00 36.97 1.85
2185 2334 5.986936 ACTACTTGCTTTCGCTTTCTTTAC 58.013 37.500 0.00 0.00 36.97 2.01
2186 2335 4.893424 ACTTGCTTTCGCTTTCTTTACA 57.107 36.364 0.00 0.00 36.97 2.41
2187 2336 4.598062 ACTTGCTTTCGCTTTCTTTACAC 58.402 39.130 0.00 0.00 36.97 2.90
2188 2337 4.095782 ACTTGCTTTCGCTTTCTTTACACA 59.904 37.500 0.00 0.00 36.97 3.72
2189 2338 4.624336 TGCTTTCGCTTTCTTTACACAA 57.376 36.364 0.00 0.00 36.97 3.33
2190 2339 4.987832 TGCTTTCGCTTTCTTTACACAAA 58.012 34.783 0.00 0.00 36.97 2.83
2191 2340 4.796312 TGCTTTCGCTTTCTTTACACAAAC 59.204 37.500 0.00 0.00 36.97 2.93
2192 2341 4.796312 GCTTTCGCTTTCTTTACACAAACA 59.204 37.500 0.00 0.00 0.00 2.83
2193 2342 5.287513 GCTTTCGCTTTCTTTACACAAACAA 59.712 36.000 0.00 0.00 0.00 2.83
2194 2343 6.183360 GCTTTCGCTTTCTTTACACAAACAAA 60.183 34.615 0.00 0.00 0.00 2.83
2195 2344 6.620253 TTCGCTTTCTTTACACAAACAAAC 57.380 33.333 0.00 0.00 0.00 2.93
2196 2345 4.789119 TCGCTTTCTTTACACAAACAAACG 59.211 37.500 0.00 0.00 0.00 3.60
2197 2346 4.545519 CGCTTTCTTTACACAAACAAACGC 60.546 41.667 0.00 0.00 0.00 4.84
2198 2347 4.324936 GCTTTCTTTACACAAACAAACGCA 59.675 37.500 0.00 0.00 0.00 5.24
2199 2348 5.498542 GCTTTCTTTACACAAACAAACGCAG 60.499 40.000 0.00 0.00 0.00 5.18
2215 2364 4.278678 ACGCAGTTTGAGTTCTCAAAAG 57.721 40.909 23.60 19.96 37.78 2.27
2216 2365 3.938963 ACGCAGTTTGAGTTCTCAAAAGA 59.061 39.130 23.60 5.65 37.78 2.52
2217 2366 4.394920 ACGCAGTTTGAGTTCTCAAAAGAA 59.605 37.500 23.60 5.35 37.78 2.52
2218 2367 5.106317 ACGCAGTTTGAGTTCTCAAAAGAAA 60.106 36.000 23.60 5.03 40.07 2.52
2219 2368 5.799936 CGCAGTTTGAGTTCTCAAAAGAAAA 59.200 36.000 23.60 4.41 43.04 2.29
2220 2369 6.307800 CGCAGTTTGAGTTCTCAAAAGAAAAA 59.692 34.615 23.60 3.80 43.04 1.94
2249 2398 6.967498 GCAGTTTGAGAATTATGCGTTTTAC 58.033 36.000 0.00 0.00 0.00 2.01
2250 2399 6.580791 GCAGTTTGAGAATTATGCGTTTTACA 59.419 34.615 0.00 0.00 0.00 2.41
2251 2400 7.201266 GCAGTTTGAGAATTATGCGTTTTACAG 60.201 37.037 0.00 0.00 0.00 2.74
2252 2401 6.801862 AGTTTGAGAATTATGCGTTTTACAGC 59.198 34.615 0.00 0.00 0.00 4.40
2260 2409 3.766676 TGCGTTTTACAGCAAGAACAA 57.233 38.095 0.00 0.00 40.78 2.83
2261 2410 3.430931 TGCGTTTTACAGCAAGAACAAC 58.569 40.909 0.00 0.00 40.78 3.32
2262 2411 2.787129 GCGTTTTACAGCAAGAACAACC 59.213 45.455 0.00 0.00 0.00 3.77
2263 2412 3.732471 GCGTTTTACAGCAAGAACAACCA 60.732 43.478 0.00 0.00 0.00 3.67
2264 2413 4.416620 CGTTTTACAGCAAGAACAACCAA 58.583 39.130 0.00 0.00 0.00 3.67
2265 2414 4.859798 CGTTTTACAGCAAGAACAACCAAA 59.140 37.500 0.00 0.00 0.00 3.28
2266 2415 5.518487 CGTTTTACAGCAAGAACAACCAAAT 59.482 36.000 0.00 0.00 0.00 2.32
2267 2416 6.693545 CGTTTTACAGCAAGAACAACCAAATA 59.306 34.615 0.00 0.00 0.00 1.40
2268 2417 7.381139 CGTTTTACAGCAAGAACAACCAAATAT 59.619 33.333 0.00 0.00 0.00 1.28
2269 2418 9.685828 GTTTTACAGCAAGAACAACCAAATATA 57.314 29.630 0.00 0.00 0.00 0.86
2270 2419 9.906660 TTTTACAGCAAGAACAACCAAATATAG 57.093 29.630 0.00 0.00 0.00 1.31
2271 2420 6.515272 ACAGCAAGAACAACCAAATATAGG 57.485 37.500 0.00 0.00 0.00 2.57
2272 2421 5.105756 ACAGCAAGAACAACCAAATATAGGC 60.106 40.000 0.00 0.00 0.00 3.93
2273 2422 4.402474 AGCAAGAACAACCAAATATAGGCC 59.598 41.667 0.00 0.00 0.00 5.19
2274 2423 4.733523 GCAAGAACAACCAAATATAGGCCG 60.734 45.833 0.00 0.00 0.00 6.13
2275 2424 4.230745 AGAACAACCAAATATAGGCCGT 57.769 40.909 0.00 0.00 0.00 5.68
2276 2425 4.196971 AGAACAACCAAATATAGGCCGTC 58.803 43.478 0.00 0.00 0.00 4.79
2277 2426 2.927028 ACAACCAAATATAGGCCGTCC 58.073 47.619 0.00 0.00 0.00 4.79
2278 2427 2.240160 ACAACCAAATATAGGCCGTCCA 59.760 45.455 0.00 0.00 33.74 4.02
2279 2428 3.283751 CAACCAAATATAGGCCGTCCAA 58.716 45.455 0.00 0.00 33.74 3.53
2280 2429 3.876309 ACCAAATATAGGCCGTCCAAT 57.124 42.857 0.00 0.00 33.74 3.16
2281 2430 3.751518 ACCAAATATAGGCCGTCCAATC 58.248 45.455 0.00 0.00 33.74 2.67
2282 2431 3.137544 ACCAAATATAGGCCGTCCAATCA 59.862 43.478 0.00 0.00 33.74 2.57
2283 2432 3.753272 CCAAATATAGGCCGTCCAATCAG 59.247 47.826 0.00 0.00 33.74 2.90
2284 2433 2.770164 ATATAGGCCGTCCAATCAGC 57.230 50.000 0.00 0.00 33.74 4.26
2285 2434 1.419381 TATAGGCCGTCCAATCAGCA 58.581 50.000 0.00 0.00 33.74 4.41
2286 2435 0.107456 ATAGGCCGTCCAATCAGCAG 59.893 55.000 0.00 0.00 33.74 4.24
2287 2436 0.975556 TAGGCCGTCCAATCAGCAGA 60.976 55.000 0.00 0.00 33.74 4.26
2288 2437 1.153086 GGCCGTCCAATCAGCAGAT 60.153 57.895 0.00 0.00 35.53 2.90
2289 2438 1.162800 GGCCGTCCAATCAGCAGATC 61.163 60.000 0.00 0.00 31.90 2.75
2290 2439 1.493950 GCCGTCCAATCAGCAGATCG 61.494 60.000 0.00 0.00 31.90 3.69
2291 2440 0.877649 CCGTCCAATCAGCAGATCGG 60.878 60.000 3.17 3.17 31.90 4.18
2292 2441 0.103026 CGTCCAATCAGCAGATCGGA 59.897 55.000 0.00 0.00 34.96 4.55
2294 2443 0.103026 TCCAATCAGCAGATCGGACG 59.897 55.000 0.00 0.00 32.37 4.79
2295 2444 0.179100 CCAATCAGCAGATCGGACGT 60.179 55.000 0.00 0.00 29.19 4.34
2296 2445 1.645034 CAATCAGCAGATCGGACGTT 58.355 50.000 0.00 0.00 31.90 3.99
2297 2446 1.590238 CAATCAGCAGATCGGACGTTC 59.410 52.381 0.00 0.00 31.90 3.95
2298 2447 0.103208 ATCAGCAGATCGGACGTTCC 59.897 55.000 0.00 0.00 0.00 3.62
2299 2448 1.215382 CAGCAGATCGGACGTTCCA 59.785 57.895 0.00 0.00 35.91 3.53
2300 2449 0.389817 CAGCAGATCGGACGTTCCAA 60.390 55.000 0.00 0.00 35.91 3.53
2301 2450 0.320374 AGCAGATCGGACGTTCCAAA 59.680 50.000 0.00 0.00 35.91 3.28
2302 2451 1.066143 AGCAGATCGGACGTTCCAAAT 60.066 47.619 0.00 0.00 35.91 2.32
2303 2452 1.737793 GCAGATCGGACGTTCCAAATT 59.262 47.619 0.00 0.00 35.91 1.82
2304 2453 2.476185 GCAGATCGGACGTTCCAAATTG 60.476 50.000 0.00 0.00 35.91 2.32
2305 2454 3.000041 CAGATCGGACGTTCCAAATTGA 59.000 45.455 0.00 0.00 35.91 2.57
2306 2455 3.062639 CAGATCGGACGTTCCAAATTGAG 59.937 47.826 0.00 0.00 35.91 3.02
2307 2456 1.153353 TCGGACGTTCCAAATTGAGC 58.847 50.000 0.00 0.00 35.91 4.26
2308 2457 1.156736 CGGACGTTCCAAATTGAGCT 58.843 50.000 0.00 0.00 35.91 4.09
2309 2458 1.135972 CGGACGTTCCAAATTGAGCTG 60.136 52.381 0.00 0.00 35.91 4.24
2310 2459 2.151202 GGACGTTCCAAATTGAGCTGA 58.849 47.619 0.00 0.00 36.28 4.26
2311 2460 2.552315 GGACGTTCCAAATTGAGCTGAA 59.448 45.455 0.00 0.00 36.28 3.02
2312 2461 3.191371 GGACGTTCCAAATTGAGCTGAAT 59.809 43.478 0.00 0.00 36.28 2.57
2313 2462 4.394920 GGACGTTCCAAATTGAGCTGAATA 59.605 41.667 0.00 0.00 36.28 1.75
2314 2463 5.447818 GGACGTTCCAAATTGAGCTGAATAG 60.448 44.000 0.00 0.00 36.28 1.73
2315 2464 5.245531 ACGTTCCAAATTGAGCTGAATAGA 58.754 37.500 0.00 0.00 0.00 1.98
2316 2465 5.352569 ACGTTCCAAATTGAGCTGAATAGAG 59.647 40.000 0.00 0.00 0.00 2.43
2317 2466 5.352569 CGTTCCAAATTGAGCTGAATAGAGT 59.647 40.000 0.00 0.00 0.00 3.24
2318 2467 6.549952 GTTCCAAATTGAGCTGAATAGAGTG 58.450 40.000 0.00 0.00 0.00 3.51
2319 2468 5.188434 TCCAAATTGAGCTGAATAGAGTGG 58.812 41.667 0.00 5.33 0.00 4.00
2320 2469 4.946157 CCAAATTGAGCTGAATAGAGTGGT 59.054 41.667 0.00 0.00 0.00 4.16
2321 2470 6.070251 TCCAAATTGAGCTGAATAGAGTGGTA 60.070 38.462 0.00 0.00 0.00 3.25
2322 2471 6.037610 CCAAATTGAGCTGAATAGAGTGGTAC 59.962 42.308 0.00 0.00 0.00 3.34
2323 2472 6.552445 AATTGAGCTGAATAGAGTGGTACT 57.448 37.500 0.00 0.00 0.00 2.73
2324 2473 7.661536 AATTGAGCTGAATAGAGTGGTACTA 57.338 36.000 0.00 0.00 0.00 1.82
2325 2474 6.452494 TTGAGCTGAATAGAGTGGTACTAC 57.548 41.667 0.19 0.19 0.00 2.73
2326 2475 4.888239 TGAGCTGAATAGAGTGGTACTACC 59.112 45.833 5.65 0.00 39.22 3.18
2327 2476 5.132043 AGCTGAATAGAGTGGTACTACCT 57.868 43.478 5.65 5.77 39.58 3.08
2328 2477 5.134661 AGCTGAATAGAGTGGTACTACCTC 58.865 45.833 5.65 3.14 39.58 3.85
2329 2478 4.278919 GCTGAATAGAGTGGTACTACCTCC 59.721 50.000 5.65 0.00 39.58 4.30
2330 2479 4.458397 TGAATAGAGTGGTACTACCTCCG 58.542 47.826 5.65 0.00 39.58 4.63
2331 2480 4.080129 TGAATAGAGTGGTACTACCTCCGT 60.080 45.833 5.65 0.00 39.58 4.69
2332 2481 5.130975 TGAATAGAGTGGTACTACCTCCGTA 59.869 44.000 5.65 0.00 39.58 4.02
2333 2482 3.557228 AGAGTGGTACTACCTCCGTAG 57.443 52.381 5.65 0.00 46.41 3.51
2354 2503 8.099746 CGTAGTTTTGAACTAAGGTTGTTTTG 57.900 34.615 2.37 0.00 44.95 2.44
2355 2504 7.964011 CGTAGTTTTGAACTAAGGTTGTTTTGA 59.036 33.333 2.37 0.00 44.95 2.69
2356 2505 9.628746 GTAGTTTTGAACTAAGGTTGTTTTGAA 57.371 29.630 2.37 0.00 44.95 2.69
2357 2506 8.528917 AGTTTTGAACTAAGGTTGTTTTGAAC 57.471 30.769 0.00 0.00 40.69 3.18
2358 2507 8.364894 AGTTTTGAACTAAGGTTGTTTTGAACT 58.635 29.630 0.00 0.00 40.69 3.01
2359 2508 9.628746 GTTTTGAACTAAGGTTGTTTTGAACTA 57.371 29.630 0.00 0.00 35.58 2.24
2361 2510 9.849166 TTTGAACTAAGGTTGTTTTGAACTAAG 57.151 29.630 0.00 0.00 35.58 2.18
2362 2511 7.992008 TGAACTAAGGTTGTTTTGAACTAAGG 58.008 34.615 0.00 0.00 35.58 2.69
2363 2512 7.612633 TGAACTAAGGTTGTTTTGAACTAAGGT 59.387 33.333 0.00 0.00 35.58 3.50
2364 2513 7.949690 ACTAAGGTTGTTTTGAACTAAGGTT 57.050 32.000 0.00 0.00 38.52 3.50
2365 2514 8.357290 ACTAAGGTTGTTTTGAACTAAGGTTT 57.643 30.769 0.00 0.00 35.58 3.27
2366 2515 8.809066 ACTAAGGTTGTTTTGAACTAAGGTTTT 58.191 29.630 0.00 0.00 35.58 2.43
2369 2518 8.991243 AGGTTGTTTTGAACTAAGGTTTTAAC 57.009 30.769 0.00 0.00 35.58 2.01
2385 2534 7.618502 GGTTTTAACCTTGGTTCAAAATTGT 57.381 32.000 8.46 0.00 45.75 2.71
2386 2535 7.468441 GGTTTTAACCTTGGTTCAAAATTGTG 58.532 34.615 8.46 0.00 45.75 3.33
2387 2536 7.334671 GGTTTTAACCTTGGTTCAAAATTGTGA 59.665 33.333 8.46 0.00 45.75 3.58
2388 2537 7.835634 TTTAACCTTGGTTCAAAATTGTGAC 57.164 32.000 8.46 0.00 0.00 3.67
2389 2538 5.413309 AACCTTGGTTCAAAATTGTGACA 57.587 34.783 0.00 0.00 0.00 3.58
2390 2539 4.754322 ACCTTGGTTCAAAATTGTGACAC 58.246 39.130 0.00 0.00 0.00 3.67
2391 2540 4.466015 ACCTTGGTTCAAAATTGTGACACT 59.534 37.500 7.20 0.00 0.00 3.55
2392 2541 5.043248 CCTTGGTTCAAAATTGTGACACTC 58.957 41.667 7.20 0.00 0.00 3.51
2393 2542 5.394005 CCTTGGTTCAAAATTGTGACACTCA 60.394 40.000 7.20 0.00 0.00 3.41
2394 2543 5.850557 TGGTTCAAAATTGTGACACTCAT 57.149 34.783 7.20 0.00 0.00 2.90
2395 2544 6.219417 TGGTTCAAAATTGTGACACTCATT 57.781 33.333 7.20 2.70 0.00 2.57
2396 2545 7.340122 TGGTTCAAAATTGTGACACTCATTA 57.660 32.000 7.20 0.00 0.00 1.90
2397 2546 7.950512 TGGTTCAAAATTGTGACACTCATTAT 58.049 30.769 7.20 0.00 0.00 1.28
2398 2547 7.866898 TGGTTCAAAATTGTGACACTCATTATG 59.133 33.333 7.20 0.01 0.00 1.90
2399 2548 8.081633 GGTTCAAAATTGTGACACTCATTATGA 58.918 33.333 7.20 0.00 0.00 2.15
2400 2549 9.462174 GTTCAAAATTGTGACACTCATTATGAA 57.538 29.630 7.20 7.88 0.00 2.57
2404 2553 8.991243 AAATTGTGACACTCATTATGAATTGG 57.009 30.769 7.20 0.00 0.00 3.16
2405 2554 7.943079 ATTGTGACACTCATTATGAATTGGA 57.057 32.000 7.20 0.00 0.00 3.53
2406 2555 6.990341 TGTGACACTCATTATGAATTGGAG 57.010 37.500 7.20 0.00 0.00 3.86
2407 2556 5.355071 TGTGACACTCATTATGAATTGGAGC 59.645 40.000 7.20 0.00 0.00 4.70
2408 2557 5.355071 GTGACACTCATTATGAATTGGAGCA 59.645 40.000 0.00 0.00 0.00 4.26
2409 2558 6.039047 GTGACACTCATTATGAATTGGAGCAT 59.961 38.462 0.00 0.00 0.00 3.79
2410 2559 7.227314 GTGACACTCATTATGAATTGGAGCATA 59.773 37.037 0.00 0.00 0.00 3.14
2411 2560 7.443272 TGACACTCATTATGAATTGGAGCATAG 59.557 37.037 0.00 0.00 0.00 2.23
2412 2561 7.285566 ACACTCATTATGAATTGGAGCATAGT 58.714 34.615 0.00 0.00 0.00 2.12
2413 2562 8.432013 ACACTCATTATGAATTGGAGCATAGTA 58.568 33.333 0.00 0.00 0.00 1.82
2414 2563 8.933807 CACTCATTATGAATTGGAGCATAGTAG 58.066 37.037 0.00 0.00 0.00 2.57
2415 2564 8.654997 ACTCATTATGAATTGGAGCATAGTAGT 58.345 33.333 0.00 0.00 0.00 2.73
2422 2571 9.632638 ATGAATTGGAGCATAGTAGTATTGTTT 57.367 29.630 0.00 0.00 0.00 2.83
2423 2572 9.109393 TGAATTGGAGCATAGTAGTATTGTTTC 57.891 33.333 0.00 0.00 0.00 2.78
2424 2573 9.109393 GAATTGGAGCATAGTAGTATTGTTTCA 57.891 33.333 0.00 0.00 0.00 2.69
2425 2574 7.843490 TTGGAGCATAGTAGTATTGTTTCAC 57.157 36.000 0.00 0.00 0.00 3.18
2426 2575 6.346096 TGGAGCATAGTAGTATTGTTTCACC 58.654 40.000 0.00 0.00 0.00 4.02
2427 2576 6.070481 TGGAGCATAGTAGTATTGTTTCACCA 60.070 38.462 0.00 0.00 0.00 4.17
2428 2577 6.992715 GGAGCATAGTAGTATTGTTTCACCAT 59.007 38.462 0.00 0.00 0.00 3.55
2429 2578 8.148351 GGAGCATAGTAGTATTGTTTCACCATA 58.852 37.037 0.00 0.00 0.00 2.74
2430 2579 9.197694 GAGCATAGTAGTATTGTTTCACCATAG 57.802 37.037 0.00 0.00 0.00 2.23
2431 2580 8.150945 AGCATAGTAGTATTGTTTCACCATAGG 58.849 37.037 0.00 0.00 0.00 2.57
2432 2581 7.387948 GCATAGTAGTATTGTTTCACCATAGGG 59.612 40.741 0.00 0.00 41.29 3.53
2448 2597 6.494666 CCATAGGGTAAATTCAGTAGGTGA 57.505 41.667 0.00 0.00 0.00 4.02
2450 2599 7.037153 ACCATAGGGTAAATTCAGTAGGTGAAA 60.037 37.037 0.00 0.00 46.99 2.69
2460 2609 6.877611 TTCAGTAGGTGAAAAAGGAACATC 57.122 37.500 0.00 0.00 42.49 3.06
2461 2610 5.313712 TCAGTAGGTGAAAAAGGAACATCC 58.686 41.667 0.00 0.00 31.40 3.51
2462 2611 4.459337 CAGTAGGTGAAAAAGGAACATCCC 59.541 45.833 0.00 0.00 37.19 3.85
2463 2612 3.611025 AGGTGAAAAAGGAACATCCCA 57.389 42.857 0.00 0.00 37.19 4.37
2464 2613 3.230976 AGGTGAAAAAGGAACATCCCAC 58.769 45.455 0.00 0.00 37.19 4.61
2465 2614 2.030274 GGTGAAAAAGGAACATCCCACG 60.030 50.000 0.00 0.00 37.19 4.94
2466 2615 1.611491 TGAAAAAGGAACATCCCACGC 59.389 47.619 0.00 0.00 37.19 5.34
2467 2616 0.596082 AAAAAGGAACATCCCACGCG 59.404 50.000 3.53 3.53 37.19 6.01
2468 2617 1.241315 AAAAGGAACATCCCACGCGG 61.241 55.000 12.47 0.00 37.19 6.46
2479 2628 3.988459 CCACGCGGGATAAAAAGTG 57.012 52.632 11.66 0.00 40.01 3.16
2480 2629 0.450184 CCACGCGGGATAAAAAGTGG 59.550 55.000 11.66 0.00 42.31 4.00
2481 2630 1.444836 CACGCGGGATAAAAAGTGGA 58.555 50.000 12.47 0.00 0.00 4.02
2482 2631 1.807742 CACGCGGGATAAAAAGTGGAA 59.192 47.619 12.47 0.00 0.00 3.53
2483 2632 2.081462 ACGCGGGATAAAAAGTGGAAG 58.919 47.619 12.47 0.00 0.00 3.46
2484 2633 2.289819 ACGCGGGATAAAAAGTGGAAGA 60.290 45.455 12.47 0.00 0.00 2.87
2485 2634 2.745281 CGCGGGATAAAAAGTGGAAGAA 59.255 45.455 0.00 0.00 0.00 2.52
2486 2635 3.189702 CGCGGGATAAAAAGTGGAAGAAA 59.810 43.478 0.00 0.00 0.00 2.52
2487 2636 4.320641 CGCGGGATAAAAAGTGGAAGAAAA 60.321 41.667 0.00 0.00 0.00 2.29
2488 2637 5.161358 GCGGGATAAAAAGTGGAAGAAAAG 58.839 41.667 0.00 0.00 0.00 2.27
2489 2638 5.048294 GCGGGATAAAAAGTGGAAGAAAAGA 60.048 40.000 0.00 0.00 0.00 2.52
2490 2639 6.516028 GCGGGATAAAAAGTGGAAGAAAAGAA 60.516 38.462 0.00 0.00 0.00 2.52
2491 2640 7.430441 CGGGATAAAAAGTGGAAGAAAAGAAA 58.570 34.615 0.00 0.00 0.00 2.52
2492 2641 8.088365 CGGGATAAAAAGTGGAAGAAAAGAAAT 58.912 33.333 0.00 0.00 0.00 2.17
2497 2646 8.942338 AAAAAGTGGAAGAAAAGAAATACCAC 57.058 30.769 0.00 0.00 44.20 4.16
2499 2648 5.934935 GTGGAAGAAAAGAAATACCACGA 57.065 39.130 0.00 0.00 37.24 4.35
2500 2649 6.496338 GTGGAAGAAAAGAAATACCACGAT 57.504 37.500 0.00 0.00 37.24 3.73
2501 2650 6.543736 GTGGAAGAAAAGAAATACCACGATC 58.456 40.000 0.00 0.00 37.24 3.69
2502 2651 5.350365 TGGAAGAAAAGAAATACCACGATCG 59.650 40.000 14.88 14.88 0.00 3.69
2503 2652 5.579511 GGAAGAAAAGAAATACCACGATCGA 59.420 40.000 24.34 0.00 0.00 3.59
2504 2653 6.258068 GGAAGAAAAGAAATACCACGATCGAT 59.742 38.462 24.34 9.29 0.00 3.59
2505 2654 6.589830 AGAAAAGAAATACCACGATCGATG 57.410 37.500 24.34 15.60 0.00 3.84
2506 2655 4.795970 AAAGAAATACCACGATCGATGC 57.204 40.909 24.34 1.14 0.00 3.91
2507 2656 3.452755 AGAAATACCACGATCGATGCA 57.547 42.857 24.34 2.90 0.00 3.96
2508 2657 3.995199 AGAAATACCACGATCGATGCAT 58.005 40.909 24.34 0.00 0.00 3.96
2509 2658 5.134202 AGAAATACCACGATCGATGCATA 57.866 39.130 24.34 11.13 0.00 3.14
2510 2659 5.724328 AGAAATACCACGATCGATGCATAT 58.276 37.500 24.34 12.67 0.00 1.78
2511 2660 6.166279 AGAAATACCACGATCGATGCATATT 58.834 36.000 24.34 16.80 0.00 1.28
2512 2661 6.311445 AGAAATACCACGATCGATGCATATTC 59.689 38.462 24.34 15.96 0.00 1.75
2513 2662 2.688507 ACCACGATCGATGCATATTCC 58.311 47.619 24.34 0.00 0.00 3.01
2514 2663 2.037121 ACCACGATCGATGCATATTCCA 59.963 45.455 24.34 0.00 0.00 3.53
2515 2664 3.066380 CCACGATCGATGCATATTCCAA 58.934 45.455 24.34 0.00 0.00 3.53
2516 2665 3.124128 CCACGATCGATGCATATTCCAAG 59.876 47.826 24.34 0.00 0.00 3.61
2517 2666 3.989817 CACGATCGATGCATATTCCAAGA 59.010 43.478 24.34 0.00 0.00 3.02
2518 2667 4.448732 CACGATCGATGCATATTCCAAGAA 59.551 41.667 24.34 0.00 0.00 2.52
2519 2668 5.050159 CACGATCGATGCATATTCCAAGAAA 60.050 40.000 24.34 0.00 0.00 2.52
2520 2669 5.702670 ACGATCGATGCATATTCCAAGAAAT 59.297 36.000 24.34 0.00 0.00 2.17
2521 2670 6.019762 CGATCGATGCATATTCCAAGAAATG 58.980 40.000 10.26 0.00 0.00 2.32
2522 2671 6.128472 CGATCGATGCATATTCCAAGAAATGA 60.128 38.462 10.26 0.00 0.00 2.57
2523 2672 6.940831 TCGATGCATATTCCAAGAAATGAA 57.059 33.333 0.00 0.00 0.00 2.57
2524 2673 7.332213 TCGATGCATATTCCAAGAAATGAAA 57.668 32.000 0.00 0.00 0.00 2.69
2525 2674 7.944061 TCGATGCATATTCCAAGAAATGAAAT 58.056 30.769 0.00 0.00 0.00 2.17
2526 2675 8.077991 TCGATGCATATTCCAAGAAATGAAATC 58.922 33.333 0.00 0.00 0.00 2.17
2527 2676 8.080417 CGATGCATATTCCAAGAAATGAAATCT 58.920 33.333 0.00 0.00 0.00 2.40
2528 2677 9.193133 GATGCATATTCCAAGAAATGAAATCTG 57.807 33.333 0.00 0.00 0.00 2.90
2529 2678 8.070034 TGCATATTCCAAGAAATGAAATCTGT 57.930 30.769 0.00 0.00 0.00 3.41
2530 2679 8.192774 TGCATATTCCAAGAAATGAAATCTGTC 58.807 33.333 0.00 0.00 0.00 3.51
2531 2680 7.650903 GCATATTCCAAGAAATGAAATCTGTCC 59.349 37.037 0.00 0.00 0.00 4.02
2532 2681 8.910944 CATATTCCAAGAAATGAAATCTGTCCT 58.089 33.333 0.00 0.00 0.00 3.85
2533 2682 6.824305 TTCCAAGAAATGAAATCTGTCCTC 57.176 37.500 0.00 0.00 0.00 3.71
2534 2683 5.879763 TCCAAGAAATGAAATCTGTCCTCA 58.120 37.500 0.00 0.00 0.00 3.86
2535 2684 5.942236 TCCAAGAAATGAAATCTGTCCTCAG 59.058 40.000 0.00 0.00 42.54 3.35
2536 2685 5.709164 CCAAGAAATGAAATCTGTCCTCAGT 59.291 40.000 0.00 0.00 41.91 3.41
2537 2686 6.349115 CCAAGAAATGAAATCTGTCCTCAGTG 60.349 42.308 0.00 0.00 41.91 3.66
2538 2687 4.699257 AGAAATGAAATCTGTCCTCAGTGC 59.301 41.667 0.00 0.00 41.91 4.40
2539 2688 3.996921 ATGAAATCTGTCCTCAGTGCT 57.003 42.857 0.00 0.00 41.91 4.40
2540 2689 3.049708 TGAAATCTGTCCTCAGTGCTG 57.950 47.619 0.00 0.00 41.91 4.41
2541 2690 2.634453 TGAAATCTGTCCTCAGTGCTGA 59.366 45.455 1.69 1.69 41.91 4.26
2542 2691 2.758736 AATCTGTCCTCAGTGCTGAC 57.241 50.000 0.00 5.26 41.91 3.51
2543 2692 0.529833 ATCTGTCCTCAGTGCTGACG 59.470 55.000 0.00 0.00 41.91 4.35
2544 2693 0.823769 TCTGTCCTCAGTGCTGACGT 60.824 55.000 0.00 0.00 41.91 4.34
2545 2694 0.387878 CTGTCCTCAGTGCTGACGTC 60.388 60.000 9.11 9.11 36.97 4.34
2546 2695 1.080434 GTCCTCAGTGCTGACGTCC 60.080 63.158 14.12 0.00 35.46 4.79
2547 2696 1.530655 TCCTCAGTGCTGACGTCCA 60.531 57.895 14.12 1.13 35.46 4.02
2548 2697 1.112916 TCCTCAGTGCTGACGTCCAA 61.113 55.000 14.12 0.00 35.46 3.53
2549 2698 0.946221 CCTCAGTGCTGACGTCCAAC 60.946 60.000 14.12 8.61 35.46 3.77
2561 2710 2.029964 TCCAACGGACTTGACGGC 59.970 61.111 0.00 0.00 35.23 5.68
2562 2711 3.047877 CCAACGGACTTGACGGCC 61.048 66.667 0.00 0.00 35.23 6.13
2577 2726 3.064324 GCCGAGCCAACCAGCAAT 61.064 61.111 0.00 0.00 34.23 3.56
2578 2727 2.879907 CCGAGCCAACCAGCAATG 59.120 61.111 0.00 0.00 34.23 2.82
2579 2728 1.973281 CCGAGCCAACCAGCAATGT 60.973 57.895 0.00 0.00 34.23 2.71
2580 2729 1.526575 CCGAGCCAACCAGCAATGTT 61.527 55.000 0.00 0.00 34.23 2.71
2581 2730 0.314935 CGAGCCAACCAGCAATGTTT 59.685 50.000 0.00 0.00 34.23 2.83
2582 2731 1.539388 CGAGCCAACCAGCAATGTTTA 59.461 47.619 0.00 0.00 34.23 2.01
2583 2732 2.668279 CGAGCCAACCAGCAATGTTTAC 60.668 50.000 0.00 0.00 34.23 2.01
2584 2733 2.558359 GAGCCAACCAGCAATGTTTACT 59.442 45.455 0.00 0.00 34.23 2.24
2585 2734 2.297033 AGCCAACCAGCAATGTTTACTG 59.703 45.455 0.00 0.00 34.23 2.74
2592 2741 4.805219 CCAGCAATGTTTACTGGGTTAAC 58.195 43.478 0.00 0.00 45.97 2.01
2593 2742 4.321675 CCAGCAATGTTTACTGGGTTAACC 60.322 45.833 16.85 16.85 45.97 2.85
2594 2743 3.504520 AGCAATGTTTACTGGGTTAACCG 59.495 43.478 18.39 8.21 44.64 4.44
2595 2744 3.828786 CAATGTTTACTGGGTTAACCGC 58.171 45.455 18.39 11.73 44.64 5.68
2596 2745 1.894881 TGTTTACTGGGTTAACCGCC 58.105 50.000 18.39 6.26 44.64 6.13
2597 2746 0.798159 GTTTACTGGGTTAACCGCCG 59.202 55.000 18.39 11.09 44.64 6.46
2598 2747 0.683973 TTTACTGGGTTAACCGCCGA 59.316 50.000 18.39 1.32 44.64 5.54
2599 2748 0.683973 TTACTGGGTTAACCGCCGAA 59.316 50.000 18.39 7.46 44.64 4.30
2600 2749 0.903942 TACTGGGTTAACCGCCGAAT 59.096 50.000 18.39 3.49 44.64 3.34
2601 2750 0.903942 ACTGGGTTAACCGCCGAATA 59.096 50.000 18.39 0.00 44.64 1.75
2602 2751 1.278699 ACTGGGTTAACCGCCGAATAA 59.721 47.619 18.39 0.00 44.64 1.40
2603 2752 2.290197 ACTGGGTTAACCGCCGAATAAA 60.290 45.455 18.39 0.00 44.64 1.40
2604 2753 2.748532 CTGGGTTAACCGCCGAATAAAA 59.251 45.455 18.39 0.00 44.64 1.52
2605 2754 2.748532 TGGGTTAACCGCCGAATAAAAG 59.251 45.455 18.39 0.00 44.64 2.27
2606 2755 2.478370 GGGTTAACCGCCGAATAAAAGC 60.478 50.000 18.39 0.00 36.71 3.51
2607 2756 2.162008 GGTTAACCGCCGAATAAAAGCA 59.838 45.455 9.34 0.00 0.00 3.91
2608 2757 3.181494 GGTTAACCGCCGAATAAAAGCAT 60.181 43.478 9.34 0.00 0.00 3.79
2609 2758 4.035441 GGTTAACCGCCGAATAAAAGCATA 59.965 41.667 9.34 0.00 0.00 3.14
2610 2759 5.278120 GGTTAACCGCCGAATAAAAGCATAT 60.278 40.000 9.34 0.00 0.00 1.78
2611 2760 6.073112 GGTTAACCGCCGAATAAAAGCATATA 60.073 38.462 9.34 0.00 0.00 0.86
2612 2761 7.361457 GGTTAACCGCCGAATAAAAGCATATAT 60.361 37.037 9.34 0.00 0.00 0.86
2613 2762 5.545658 ACCGCCGAATAAAAGCATATATG 57.454 39.130 8.45 8.45 0.00 1.78
2638 2787 9.554395 TGCTATTCCGTTCATAAAAATATGAGA 57.446 29.630 0.00 0.00 37.70 3.27
2671 2820 9.108111 AGATATTTTATTATTCCCTCCGTACCA 57.892 33.333 0.00 0.00 0.00 3.25
2672 2821 9.901172 GATATTTTATTATTCCCTCCGTACCAT 57.099 33.333 0.00 0.00 0.00 3.55
2678 2827 9.551339 TTATTATTCCCTCCGTACCATATTACT 57.449 33.333 0.00 0.00 0.00 2.24
2679 2828 5.997384 ATTCCCTCCGTACCATATTACTC 57.003 43.478 0.00 0.00 0.00 2.59
2680 2829 3.771216 TCCCTCCGTACCATATTACTCC 58.229 50.000 0.00 0.00 0.00 3.85
2681 2830 2.830321 CCCTCCGTACCATATTACTCCC 59.170 54.545 0.00 0.00 0.00 4.30
2682 2831 3.501751 CCCTCCGTACCATATTACTCCCT 60.502 52.174 0.00 0.00 0.00 4.20
2683 2832 3.762823 CCTCCGTACCATATTACTCCCTC 59.237 52.174 0.00 0.00 0.00 4.30
2684 2833 3.762823 CTCCGTACCATATTACTCCCTCC 59.237 52.174 0.00 0.00 0.00 4.30
2685 2834 2.490903 CCGTACCATATTACTCCCTCCG 59.509 54.545 0.00 0.00 0.00 4.63
2686 2835 3.152341 CGTACCATATTACTCCCTCCGT 58.848 50.000 0.00 0.00 0.00 4.69
2687 2836 3.571401 CGTACCATATTACTCCCTCCGTT 59.429 47.826 0.00 0.00 0.00 4.44
2688 2837 4.320788 CGTACCATATTACTCCCTCCGTTC 60.321 50.000 0.00 0.00 0.00 3.95
2689 2838 2.970640 ACCATATTACTCCCTCCGTTCC 59.029 50.000 0.00 0.00 0.00 3.62
2690 2839 3.240302 CCATATTACTCCCTCCGTTCCT 58.760 50.000 0.00 0.00 0.00 3.36
2691 2840 4.140853 ACCATATTACTCCCTCCGTTCCTA 60.141 45.833 0.00 0.00 0.00 2.94
2692 2841 4.836736 CCATATTACTCCCTCCGTTCCTAA 59.163 45.833 0.00 0.00 0.00 2.69
2693 2842 5.306160 CCATATTACTCCCTCCGTTCCTAAA 59.694 44.000 0.00 0.00 0.00 1.85
2694 2843 6.013639 CCATATTACTCCCTCCGTTCCTAAAT 60.014 42.308 0.00 0.00 0.00 1.40
2695 2844 7.179694 CCATATTACTCCCTCCGTTCCTAAATA 59.820 40.741 0.00 0.00 0.00 1.40
2696 2845 8.759782 CATATTACTCCCTCCGTTCCTAAATAT 58.240 37.037 0.00 0.00 0.00 1.28
2698 2847 8.731591 ATTACTCCCTCCGTTCCTAAATATAA 57.268 34.615 0.00 0.00 0.00 0.98
2699 2848 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
2700 2849 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
2701 2850 6.267242 ACTCCCTCCGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
2702 2851 6.379579 TCCCTCCGTTCCTAAATATAAGTCT 58.620 40.000 0.00 0.00 0.00 3.24
2703 2852 6.842807 TCCCTCCGTTCCTAAATATAAGTCTT 59.157 38.462 0.00 0.00 0.00 3.01
2704 2853 7.346436 TCCCTCCGTTCCTAAATATAAGTCTTT 59.654 37.037 0.00 0.00 0.00 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
274 277 1.206072 CTTCTGCTGTTGTCTGCGC 59.794 57.895 0.00 0.00 40.58 6.09
317 320 4.560856 TGTGTGTTTTGCGGGCGC 62.561 61.111 0.00 0.00 42.35 6.53
407 460 1.523095 GTCGAAGCAACTCTGTGTGTC 59.477 52.381 0.00 0.00 0.00 3.67
441 495 7.545265 TGCTTGCCATAAACTTTTGACATTATC 59.455 33.333 0.00 0.00 0.00 1.75
781 904 1.301637 GGCGGTGGCATTGCTTTTT 60.302 52.632 8.82 0.00 42.47 1.94
1384 1533 0.321346 TTCTTCATCTCACAGCGCCA 59.679 50.000 2.29 0.00 0.00 5.69
1616 1765 0.613260 TTGAGTCTTGTGCGCCCTAT 59.387 50.000 4.18 0.00 0.00 2.57
1697 1846 1.415374 GCTGAGTTTCGCTTACGTCA 58.585 50.000 0.00 0.00 41.18 4.35
1740 1889 0.663153 GTTGGTTCAGCTCTTGCGTT 59.337 50.000 0.00 0.00 45.42 4.84
1747 1896 3.423154 CCGCCGTTGGTTCAGCTC 61.423 66.667 0.00 0.00 0.00 4.09
1915 2064 5.069781 TGGATTCAGGGTTTCGTTTCAAATT 59.930 36.000 0.00 0.00 0.00 1.82
1916 2065 4.586841 TGGATTCAGGGTTTCGTTTCAAAT 59.413 37.500 0.00 0.00 0.00 2.32
2075 2224 9.632638 AGATTGCCATTAAGTAGACAAATGTAT 57.367 29.630 6.88 0.00 0.00 2.29
2076 2225 9.461312 AAGATTGCCATTAAGTAGACAAATGTA 57.539 29.630 6.88 0.00 0.00 2.29
2077 2226 7.944729 AGATTGCCATTAAGTAGACAAATGT 57.055 32.000 6.88 0.00 0.00 2.71
2078 2227 8.461222 TGAAGATTGCCATTAAGTAGACAAATG 58.539 33.333 0.00 0.00 0.00 2.32
2079 2228 8.579850 TGAAGATTGCCATTAAGTAGACAAAT 57.420 30.769 0.00 0.00 0.00 2.32
2080 2229 7.994425 TGAAGATTGCCATTAAGTAGACAAA 57.006 32.000 0.00 0.00 0.00 2.83
2081 2230 7.994425 TTGAAGATTGCCATTAAGTAGACAA 57.006 32.000 0.00 0.00 0.00 3.18
2082 2231 7.882791 TCTTTGAAGATTGCCATTAAGTAGACA 59.117 33.333 0.00 0.00 0.00 3.41
2083 2232 8.268850 TCTTTGAAGATTGCCATTAAGTAGAC 57.731 34.615 0.00 0.00 0.00 2.59
2084 2233 8.730680 GTTCTTTGAAGATTGCCATTAAGTAGA 58.269 33.333 0.00 0.00 34.49 2.59
2085 2234 7.693951 CGTTCTTTGAAGATTGCCATTAAGTAG 59.306 37.037 0.00 0.00 34.49 2.57
2086 2235 7.174253 ACGTTCTTTGAAGATTGCCATTAAGTA 59.826 33.333 0.00 0.00 34.49 2.24
2087 2236 6.016276 ACGTTCTTTGAAGATTGCCATTAAGT 60.016 34.615 0.00 0.00 34.49 2.24
2088 2237 6.306356 CACGTTCTTTGAAGATTGCCATTAAG 59.694 38.462 0.00 0.00 34.49 1.85
2089 2238 6.016693 TCACGTTCTTTGAAGATTGCCATTAA 60.017 34.615 0.00 0.00 34.49 1.40
2090 2239 5.471797 TCACGTTCTTTGAAGATTGCCATTA 59.528 36.000 0.00 0.00 34.49 1.90
2091 2240 4.278170 TCACGTTCTTTGAAGATTGCCATT 59.722 37.500 0.00 0.00 34.49 3.16
2092 2241 3.820467 TCACGTTCTTTGAAGATTGCCAT 59.180 39.130 0.00 0.00 34.49 4.40
2093 2242 3.003275 GTCACGTTCTTTGAAGATTGCCA 59.997 43.478 0.00 0.00 34.49 4.92
2094 2243 3.251004 AGTCACGTTCTTTGAAGATTGCC 59.749 43.478 0.00 0.00 34.49 4.52
2095 2244 4.474226 AGTCACGTTCTTTGAAGATTGC 57.526 40.909 0.00 0.00 34.49 3.56
2096 2245 5.810525 ACAAGTCACGTTCTTTGAAGATTG 58.189 37.500 9.03 0.00 34.49 2.67
2097 2246 6.292168 CGTACAAGTCACGTTCTTTGAAGATT 60.292 38.462 9.03 0.00 34.49 2.40
2098 2247 5.175126 CGTACAAGTCACGTTCTTTGAAGAT 59.825 40.000 9.03 0.00 34.49 2.40
2099 2248 4.501559 CGTACAAGTCACGTTCTTTGAAGA 59.498 41.667 9.03 0.00 34.74 2.87
2100 2249 4.501559 TCGTACAAGTCACGTTCTTTGAAG 59.498 41.667 9.03 0.00 40.27 3.02
2101 2250 4.422840 TCGTACAAGTCACGTTCTTTGAA 58.577 39.130 9.03 0.00 40.27 2.69
2102 2251 4.031418 TCGTACAAGTCACGTTCTTTGA 57.969 40.909 9.03 0.00 40.27 2.69
2103 2252 4.765281 TTCGTACAAGTCACGTTCTTTG 57.235 40.909 0.00 0.00 40.27 2.77
2104 2253 5.978934 ATTTCGTACAAGTCACGTTCTTT 57.021 34.783 0.00 0.00 40.27 2.52
2105 2254 5.978934 AATTTCGTACAAGTCACGTTCTT 57.021 34.783 0.00 0.00 40.27 2.52
2106 2255 6.919662 TCTTAATTTCGTACAAGTCACGTTCT 59.080 34.615 0.00 0.00 40.27 3.01
2107 2256 7.097342 TCTTAATTTCGTACAAGTCACGTTC 57.903 36.000 0.00 0.00 40.27 3.95
2108 2257 7.148689 GGATCTTAATTTCGTACAAGTCACGTT 60.149 37.037 0.00 0.00 40.27 3.99
2109 2258 6.309737 GGATCTTAATTTCGTACAAGTCACGT 59.690 38.462 0.00 0.00 40.27 4.49
2110 2259 6.309494 TGGATCTTAATTTCGTACAAGTCACG 59.691 38.462 0.00 0.00 40.72 4.35
2111 2260 7.591006 TGGATCTTAATTTCGTACAAGTCAC 57.409 36.000 0.00 0.00 0.00 3.67
2112 2261 7.148705 CGTTGGATCTTAATTTCGTACAAGTCA 60.149 37.037 0.00 0.00 0.00 3.41
2113 2262 7.171434 CGTTGGATCTTAATTTCGTACAAGTC 58.829 38.462 0.00 0.00 0.00 3.01
2114 2263 6.091713 CCGTTGGATCTTAATTTCGTACAAGT 59.908 38.462 0.00 0.00 0.00 3.16
2115 2264 6.475207 CCGTTGGATCTTAATTTCGTACAAG 58.525 40.000 0.00 0.00 0.00 3.16
2116 2265 5.163834 GCCGTTGGATCTTAATTTCGTACAA 60.164 40.000 0.00 0.00 0.00 2.41
2117 2266 4.330620 GCCGTTGGATCTTAATTTCGTACA 59.669 41.667 0.00 0.00 0.00 2.90
2118 2267 4.569564 AGCCGTTGGATCTTAATTTCGTAC 59.430 41.667 0.00 0.00 0.00 3.67
2119 2268 4.761975 AGCCGTTGGATCTTAATTTCGTA 58.238 39.130 0.00 0.00 0.00 3.43
2120 2269 3.606687 AGCCGTTGGATCTTAATTTCGT 58.393 40.909 0.00 0.00 0.00 3.85
2121 2270 4.094294 TGAAGCCGTTGGATCTTAATTTCG 59.906 41.667 0.00 0.00 0.00 3.46
2122 2271 5.560966 TGAAGCCGTTGGATCTTAATTTC 57.439 39.130 0.00 0.00 0.00 2.17
2123 2272 4.142381 GCTGAAGCCGTTGGATCTTAATTT 60.142 41.667 0.00 0.00 34.31 1.82
2124 2273 3.378427 GCTGAAGCCGTTGGATCTTAATT 59.622 43.478 0.00 0.00 34.31 1.40
2125 2274 2.945668 GCTGAAGCCGTTGGATCTTAAT 59.054 45.455 0.00 0.00 34.31 1.40
2126 2275 2.356135 GCTGAAGCCGTTGGATCTTAA 58.644 47.619 0.00 0.00 34.31 1.85
2127 2276 1.739035 CGCTGAAGCCGTTGGATCTTA 60.739 52.381 0.00 0.00 37.91 2.10
2128 2277 1.021390 CGCTGAAGCCGTTGGATCTT 61.021 55.000 0.00 0.00 37.91 2.40
2129 2278 1.448540 CGCTGAAGCCGTTGGATCT 60.449 57.895 0.00 0.00 37.91 2.75
2130 2279 3.093278 CGCTGAAGCCGTTGGATC 58.907 61.111 0.00 0.00 37.91 3.36
2131 2280 3.127533 GCGCTGAAGCCGTTGGAT 61.128 61.111 0.00 0.00 37.91 3.41
2139 2288 1.354506 CTATTGCAGGCGCTGAAGC 59.645 57.895 7.64 7.17 39.64 3.86
2140 2289 1.354506 GCTATTGCAGGCGCTGAAG 59.645 57.895 7.64 0.00 39.64 3.02
2141 2290 1.377072 TGCTATTGCAGGCGCTGAA 60.377 52.632 7.64 0.00 45.31 3.02
2142 2291 2.268600 TGCTATTGCAGGCGCTGA 59.731 55.556 7.64 0.00 45.31 4.26
2170 2319 6.862944 TTGTTTGTGTAAAGAAAGCGAAAG 57.137 33.333 0.00 0.00 0.00 2.62
2171 2320 6.183359 CGTTTGTTTGTGTAAAGAAAGCGAAA 60.183 34.615 0.00 0.00 39.00 3.46
2172 2321 5.284188 CGTTTGTTTGTGTAAAGAAAGCGAA 59.716 36.000 0.00 0.00 39.00 4.70
2173 2322 4.789119 CGTTTGTTTGTGTAAAGAAAGCGA 59.211 37.500 0.00 0.00 39.00 4.93
2174 2323 4.545519 GCGTTTGTTTGTGTAAAGAAAGCG 60.546 41.667 0.00 0.00 39.00 4.68
2175 2324 4.324936 TGCGTTTGTTTGTGTAAAGAAAGC 59.675 37.500 0.00 0.00 39.00 3.51
2176 2325 5.571357 ACTGCGTTTGTTTGTGTAAAGAAAG 59.429 36.000 0.00 0.00 39.00 2.62
2177 2326 5.462405 ACTGCGTTTGTTTGTGTAAAGAAA 58.538 33.333 0.00 0.00 36.89 2.52
2178 2327 5.049398 ACTGCGTTTGTTTGTGTAAAGAA 57.951 34.783 0.00 0.00 0.00 2.52
2179 2328 4.688511 ACTGCGTTTGTTTGTGTAAAGA 57.311 36.364 0.00 0.00 0.00 2.52
2180 2329 5.537410 CAAACTGCGTTTGTTTGTGTAAAG 58.463 37.500 19.36 0.00 45.19 1.85
2181 2330 5.502214 CAAACTGCGTTTGTTTGTGTAAA 57.498 34.783 19.36 0.00 45.19 2.01
2219 2368 5.116983 CGCATAATTCTCAAACTGCGTTTTT 59.883 36.000 6.57 0.59 45.23 1.94
2220 2369 4.616802 CGCATAATTCTCAAACTGCGTTTT 59.383 37.500 6.57 0.00 45.23 2.43
2221 2370 4.158384 CGCATAATTCTCAAACTGCGTTT 58.842 39.130 6.57 1.61 45.23 3.60
2222 2371 3.747193 CGCATAATTCTCAAACTGCGTT 58.253 40.909 6.57 0.00 45.23 4.84
2223 2372 3.389687 CGCATAATTCTCAAACTGCGT 57.610 42.857 6.57 0.00 45.23 5.24
2225 2374 6.580791 TGTAAAACGCATAATTCTCAAACTGC 59.419 34.615 0.00 0.00 0.00 4.40
2226 2375 7.201266 GCTGTAAAACGCATAATTCTCAAACTG 60.201 37.037 0.00 0.00 0.00 3.16
2227 2376 6.801862 GCTGTAAAACGCATAATTCTCAAACT 59.198 34.615 0.00 0.00 0.00 2.66
2228 2377 6.580791 TGCTGTAAAACGCATAATTCTCAAAC 59.419 34.615 0.00 0.00 0.00 2.93
2229 2378 6.673106 TGCTGTAAAACGCATAATTCTCAAA 58.327 32.000 0.00 0.00 0.00 2.69
2230 2379 6.247727 TGCTGTAAAACGCATAATTCTCAA 57.752 33.333 0.00 0.00 0.00 3.02
2231 2380 5.871465 TGCTGTAAAACGCATAATTCTCA 57.129 34.783 0.00 0.00 0.00 3.27
2232 2381 6.542852 TCTTGCTGTAAAACGCATAATTCTC 58.457 36.000 0.00 0.00 35.85 2.87
2233 2382 6.494893 TCTTGCTGTAAAACGCATAATTCT 57.505 33.333 0.00 0.00 35.85 2.40
2234 2383 6.580791 TGTTCTTGCTGTAAAACGCATAATTC 59.419 34.615 0.00 0.00 35.85 2.17
2235 2384 6.442952 TGTTCTTGCTGTAAAACGCATAATT 58.557 32.000 0.00 0.00 35.85 1.40
2236 2385 6.007936 TGTTCTTGCTGTAAAACGCATAAT 57.992 33.333 0.00 0.00 35.85 1.28
2237 2386 5.425577 TGTTCTTGCTGTAAAACGCATAA 57.574 34.783 0.00 0.00 35.85 1.90
2238 2387 5.209240 GTTGTTCTTGCTGTAAAACGCATA 58.791 37.500 0.00 0.00 35.85 3.14
2239 2388 3.980646 TGTTCTTGCTGTAAAACGCAT 57.019 38.095 0.00 0.00 35.85 4.73
2240 2389 3.430931 GTTGTTCTTGCTGTAAAACGCA 58.569 40.909 0.00 0.00 0.00 5.24
2241 2390 2.787129 GGTTGTTCTTGCTGTAAAACGC 59.213 45.455 0.00 0.00 0.00 4.84
2242 2391 4.022464 TGGTTGTTCTTGCTGTAAAACG 57.978 40.909 0.00 0.00 0.00 3.60
2243 2392 6.902224 ATTTGGTTGTTCTTGCTGTAAAAC 57.098 33.333 0.00 0.00 0.00 2.43
2244 2393 9.906660 CTATATTTGGTTGTTCTTGCTGTAAAA 57.093 29.630 0.00 0.00 0.00 1.52
2245 2394 8.519526 CCTATATTTGGTTGTTCTTGCTGTAAA 58.480 33.333 0.00 0.00 0.00 2.01
2246 2395 7.362574 GCCTATATTTGGTTGTTCTTGCTGTAA 60.363 37.037 0.00 0.00 0.00 2.41
2247 2396 6.094881 GCCTATATTTGGTTGTTCTTGCTGTA 59.905 38.462 0.00 0.00 0.00 2.74
2248 2397 5.105756 GCCTATATTTGGTTGTTCTTGCTGT 60.106 40.000 0.00 0.00 0.00 4.40
2249 2398 5.343249 GCCTATATTTGGTTGTTCTTGCTG 58.657 41.667 0.00 0.00 0.00 4.41
2250 2399 4.402474 GGCCTATATTTGGTTGTTCTTGCT 59.598 41.667 0.00 0.00 0.00 3.91
2251 2400 4.682787 GGCCTATATTTGGTTGTTCTTGC 58.317 43.478 0.00 0.00 0.00 4.01
2252 2401 4.398044 ACGGCCTATATTTGGTTGTTCTTG 59.602 41.667 0.00 0.00 0.00 3.02
2253 2402 4.595986 ACGGCCTATATTTGGTTGTTCTT 58.404 39.130 0.00 0.00 0.00 2.52
2254 2403 4.196971 GACGGCCTATATTTGGTTGTTCT 58.803 43.478 0.00 0.00 0.00 3.01
2255 2404 3.314357 GGACGGCCTATATTTGGTTGTTC 59.686 47.826 0.00 0.00 0.00 3.18
2256 2405 3.284617 GGACGGCCTATATTTGGTTGTT 58.715 45.455 0.00 0.00 0.00 2.83
2257 2406 2.240160 TGGACGGCCTATATTTGGTTGT 59.760 45.455 9.82 0.00 34.31 3.32
2258 2407 2.925724 TGGACGGCCTATATTTGGTTG 58.074 47.619 9.82 0.00 34.31 3.77
2259 2408 3.655615 TTGGACGGCCTATATTTGGTT 57.344 42.857 9.82 0.00 34.31 3.67
2260 2409 3.137544 TGATTGGACGGCCTATATTTGGT 59.862 43.478 9.82 0.00 34.31 3.67
2261 2410 3.750371 TGATTGGACGGCCTATATTTGG 58.250 45.455 9.82 0.00 34.31 3.28
2262 2411 3.189287 GCTGATTGGACGGCCTATATTTG 59.811 47.826 9.82 0.00 36.30 2.32
2263 2412 3.181445 TGCTGATTGGACGGCCTATATTT 60.181 43.478 9.82 0.00 40.96 1.40
2264 2413 2.371841 TGCTGATTGGACGGCCTATATT 59.628 45.455 9.82 0.00 40.96 1.28
2265 2414 1.977854 TGCTGATTGGACGGCCTATAT 59.022 47.619 9.82 0.00 40.96 0.86
2266 2415 1.344438 CTGCTGATTGGACGGCCTATA 59.656 52.381 9.82 0.00 40.96 1.31
2267 2416 0.107456 CTGCTGATTGGACGGCCTAT 59.893 55.000 9.82 6.32 40.96 2.57
2268 2417 0.975556 TCTGCTGATTGGACGGCCTA 60.976 55.000 9.82 0.00 40.96 3.93
2269 2418 1.630126 ATCTGCTGATTGGACGGCCT 61.630 55.000 9.82 0.00 40.96 5.19
2270 2419 1.153086 ATCTGCTGATTGGACGGCC 60.153 57.895 0.00 0.00 40.96 6.13
2271 2420 1.493950 CGATCTGCTGATTGGACGGC 61.494 60.000 11.99 0.00 41.89 5.68
2272 2421 2.598045 CGATCTGCTGATTGGACGG 58.402 57.895 11.99 0.00 32.19 4.79
2277 2426 1.590238 GAACGTCCGATCTGCTGATTG 59.410 52.381 12.71 12.71 34.58 2.67
2278 2427 1.471676 GGAACGTCCGATCTGCTGATT 60.472 52.381 7.59 0.00 32.19 2.57
2279 2428 0.103208 GGAACGTCCGATCTGCTGAT 59.897 55.000 5.69 5.69 35.26 2.90
2280 2429 1.248101 TGGAACGTCCGATCTGCTGA 61.248 55.000 0.00 0.00 40.17 4.26
2281 2430 0.389817 TTGGAACGTCCGATCTGCTG 60.390 55.000 0.00 0.00 40.17 4.41
2282 2431 0.320374 TTTGGAACGTCCGATCTGCT 59.680 50.000 0.00 0.00 40.17 4.24
2283 2432 1.369625 ATTTGGAACGTCCGATCTGC 58.630 50.000 0.00 0.00 40.17 4.26
2284 2433 3.000041 TCAATTTGGAACGTCCGATCTG 59.000 45.455 0.00 0.00 40.17 2.90
2285 2434 3.262420 CTCAATTTGGAACGTCCGATCT 58.738 45.455 0.00 0.00 40.17 2.75
2286 2435 2.223044 GCTCAATTTGGAACGTCCGATC 60.223 50.000 0.00 0.00 40.17 3.69
2287 2436 1.737793 GCTCAATTTGGAACGTCCGAT 59.262 47.619 0.00 0.00 40.17 4.18
2288 2437 1.153353 GCTCAATTTGGAACGTCCGA 58.847 50.000 0.00 0.00 40.17 4.55
2289 2438 1.135972 CAGCTCAATTTGGAACGTCCG 60.136 52.381 0.00 0.00 40.17 4.79
2290 2439 2.151202 TCAGCTCAATTTGGAACGTCC 58.849 47.619 0.00 0.00 36.96 4.79
2291 2440 3.896648 TTCAGCTCAATTTGGAACGTC 57.103 42.857 0.00 0.00 0.00 4.34
2292 2441 5.245531 TCTATTCAGCTCAATTTGGAACGT 58.754 37.500 0.00 0.00 0.00 3.99
2293 2442 5.352569 ACTCTATTCAGCTCAATTTGGAACG 59.647 40.000 0.00 0.00 0.00 3.95
2294 2443 6.404074 CCACTCTATTCAGCTCAATTTGGAAC 60.404 42.308 0.00 0.00 0.00 3.62
2295 2444 5.649395 CCACTCTATTCAGCTCAATTTGGAA 59.351 40.000 0.00 0.00 0.00 3.53
2296 2445 5.188434 CCACTCTATTCAGCTCAATTTGGA 58.812 41.667 0.00 0.00 0.00 3.53
2297 2446 4.946157 ACCACTCTATTCAGCTCAATTTGG 59.054 41.667 0.00 0.00 0.00 3.28
2298 2447 6.820656 AGTACCACTCTATTCAGCTCAATTTG 59.179 38.462 0.00 0.00 0.00 2.32
2299 2448 6.951971 AGTACCACTCTATTCAGCTCAATTT 58.048 36.000 0.00 0.00 0.00 1.82
2300 2449 6.552445 AGTACCACTCTATTCAGCTCAATT 57.448 37.500 0.00 0.00 0.00 2.32
2301 2450 6.041069 GGTAGTACCACTCTATTCAGCTCAAT 59.959 42.308 14.82 0.00 38.42 2.57
2302 2451 5.360144 GGTAGTACCACTCTATTCAGCTCAA 59.640 44.000 14.82 0.00 38.42 3.02
2303 2452 4.888239 GGTAGTACCACTCTATTCAGCTCA 59.112 45.833 14.82 0.00 38.42 4.26
2304 2453 5.134661 AGGTAGTACCACTCTATTCAGCTC 58.865 45.833 21.49 0.00 41.95 4.09
2305 2454 5.132043 AGGTAGTACCACTCTATTCAGCT 57.868 43.478 21.49 0.00 41.95 4.24
2306 2455 4.278919 GGAGGTAGTACCACTCTATTCAGC 59.721 50.000 21.49 0.00 41.95 4.26
2307 2456 4.515944 CGGAGGTAGTACCACTCTATTCAG 59.484 50.000 21.49 5.32 41.95 3.02
2308 2457 4.080129 ACGGAGGTAGTACCACTCTATTCA 60.080 45.833 21.49 0.00 41.95 2.57
2309 2458 4.459330 ACGGAGGTAGTACCACTCTATTC 58.541 47.826 21.49 7.90 41.95 1.75
2310 2459 4.516652 ACGGAGGTAGTACCACTCTATT 57.483 45.455 21.49 0.00 41.95 1.73
2311 2460 5.226194 CTACGGAGGTAGTACCACTCTAT 57.774 47.826 21.49 0.00 41.95 1.98
2312 2461 4.679373 CTACGGAGGTAGTACCACTCTA 57.321 50.000 21.49 7.68 41.95 2.43
2313 2462 3.557228 CTACGGAGGTAGTACCACTCT 57.443 52.381 21.49 0.00 41.95 3.24
2329 2478 7.964011 TCAAAACAACCTTAGTTCAAAACTACG 59.036 33.333 0.00 0.00 43.30 3.51
2330 2479 9.628746 TTCAAAACAACCTTAGTTCAAAACTAC 57.371 29.630 0.00 0.00 43.30 2.73
2331 2480 9.628746 GTTCAAAACAACCTTAGTTCAAAACTA 57.371 29.630 0.00 0.00 42.81 2.24
2332 2481 8.364894 AGTTCAAAACAACCTTAGTTCAAAACT 58.635 29.630 0.00 0.00 45.40 2.66
2333 2482 8.528917 AGTTCAAAACAACCTTAGTTCAAAAC 57.471 30.769 0.00 0.00 32.45 2.43
2335 2484 9.849166 CTTAGTTCAAAACAACCTTAGTTCAAA 57.151 29.630 0.00 0.00 32.45 2.69
2336 2485 8.463607 CCTTAGTTCAAAACAACCTTAGTTCAA 58.536 33.333 0.00 0.00 32.45 2.69
2337 2486 7.612633 ACCTTAGTTCAAAACAACCTTAGTTCA 59.387 33.333 0.00 0.00 32.45 3.18
2338 2487 7.993101 ACCTTAGTTCAAAACAACCTTAGTTC 58.007 34.615 0.00 0.00 32.45 3.01
2339 2488 7.949690 ACCTTAGTTCAAAACAACCTTAGTT 57.050 32.000 0.00 0.00 36.33 2.24
2340 2489 7.949690 AACCTTAGTTCAAAACAACCTTAGT 57.050 32.000 0.00 0.00 0.00 2.24
2343 2492 9.426837 GTTAAAACCTTAGTTCAAAACAACCTT 57.573 29.630 0.00 0.00 34.19 3.50
2344 2493 8.036575 GGTTAAAACCTTAGTTCAAAACAACCT 58.963 33.333 4.58 0.00 45.75 3.50
2345 2494 8.188531 GGTTAAAACCTTAGTTCAAAACAACC 57.811 34.615 4.58 0.00 45.75 3.77
2362 2511 8.172484 GTCACAATTTTGAACCAAGGTTAAAAC 58.828 33.333 12.96 0.00 37.96 2.43
2363 2512 7.878127 TGTCACAATTTTGAACCAAGGTTAAAA 59.122 29.630 9.92 9.92 36.85 1.52
2364 2513 7.332182 GTGTCACAATTTTGAACCAAGGTTAAA 59.668 33.333 4.14 0.53 38.60 1.52
2365 2514 6.814146 GTGTCACAATTTTGAACCAAGGTTAA 59.186 34.615 4.14 0.00 38.60 2.01
2366 2515 6.153680 AGTGTCACAATTTTGAACCAAGGTTA 59.846 34.615 4.14 0.00 38.60 2.85
2367 2516 5.046663 AGTGTCACAATTTTGAACCAAGGTT 60.047 36.000 3.73 3.73 41.54 3.50
2368 2517 4.466015 AGTGTCACAATTTTGAACCAAGGT 59.534 37.500 5.62 0.00 0.00 3.50
2369 2518 5.009854 AGTGTCACAATTTTGAACCAAGG 57.990 39.130 5.62 0.00 0.00 3.61
2370 2519 5.649557 TGAGTGTCACAATTTTGAACCAAG 58.350 37.500 5.62 0.00 0.00 3.61
2371 2520 5.651387 TGAGTGTCACAATTTTGAACCAA 57.349 34.783 5.62 0.00 0.00 3.67
2372 2521 5.850557 ATGAGTGTCACAATTTTGAACCA 57.149 34.783 5.62 0.00 0.00 3.67
2373 2522 8.081633 TCATAATGAGTGTCACAATTTTGAACC 58.918 33.333 15.65 0.00 0.00 3.62
2374 2523 9.462174 TTCATAATGAGTGTCACAATTTTGAAC 57.538 29.630 20.64 0.00 0.00 3.18
2378 2527 9.426837 CCAATTCATAATGAGTGTCACAATTTT 57.573 29.630 5.62 0.00 0.00 1.82
2379 2528 8.805175 TCCAATTCATAATGAGTGTCACAATTT 58.195 29.630 5.62 0.00 0.00 1.82
2380 2529 8.352137 TCCAATTCATAATGAGTGTCACAATT 57.648 30.769 5.62 7.36 0.00 2.32
2381 2530 7.415989 GCTCCAATTCATAATGAGTGTCACAAT 60.416 37.037 5.62 0.00 0.00 2.71
2382 2531 6.127925 GCTCCAATTCATAATGAGTGTCACAA 60.128 38.462 5.62 0.00 0.00 3.33
2383 2532 5.355071 GCTCCAATTCATAATGAGTGTCACA 59.645 40.000 5.62 0.00 0.00 3.58
2384 2533 5.355071 TGCTCCAATTCATAATGAGTGTCAC 59.645 40.000 0.00 0.00 0.00 3.67
2385 2534 5.499313 TGCTCCAATTCATAATGAGTGTCA 58.501 37.500 0.00 0.00 0.00 3.58
2386 2535 6.630444 ATGCTCCAATTCATAATGAGTGTC 57.370 37.500 0.00 0.00 0.00 3.67
2387 2536 7.285566 ACTATGCTCCAATTCATAATGAGTGT 58.714 34.615 0.00 0.00 0.00 3.55
2388 2537 7.741027 ACTATGCTCCAATTCATAATGAGTG 57.259 36.000 0.00 0.00 0.00 3.51
2389 2538 8.654997 ACTACTATGCTCCAATTCATAATGAGT 58.345 33.333 0.00 0.00 0.00 3.41
2396 2545 9.632638 AAACAATACTACTATGCTCCAATTCAT 57.367 29.630 0.00 0.00 0.00 2.57
2397 2546 9.109393 GAAACAATACTACTATGCTCCAATTCA 57.891 33.333 0.00 0.00 0.00 2.57
2398 2547 9.109393 TGAAACAATACTACTATGCTCCAATTC 57.891 33.333 0.00 0.00 0.00 2.17
2399 2548 8.893727 GTGAAACAATACTACTATGCTCCAATT 58.106 33.333 0.00 0.00 36.32 2.32
2400 2549 7.499232 GGTGAAACAATACTACTATGCTCCAAT 59.501 37.037 0.00 0.00 39.98 3.16
2401 2550 6.821665 GGTGAAACAATACTACTATGCTCCAA 59.178 38.462 0.00 0.00 39.98 3.53
2402 2551 6.070481 TGGTGAAACAATACTACTATGCTCCA 60.070 38.462 0.00 0.00 39.98 3.86
2403 2552 6.346096 TGGTGAAACAATACTACTATGCTCC 58.654 40.000 0.00 0.00 39.98 4.70
2404 2553 9.197694 CTATGGTGAAACAATACTACTATGCTC 57.802 37.037 0.00 0.00 39.98 4.26
2405 2554 8.150945 CCTATGGTGAAACAATACTACTATGCT 58.849 37.037 0.00 0.00 39.98 3.79
2406 2555 7.387948 CCCTATGGTGAAACAATACTACTATGC 59.612 40.741 0.00 0.00 39.98 3.14
2407 2556 8.429641 ACCCTATGGTGAAACAATACTACTATG 58.570 37.037 0.00 0.00 45.58 2.23
2408 2557 8.562949 ACCCTATGGTGAAACAATACTACTAT 57.437 34.615 0.00 0.00 45.58 2.12
2409 2558 7.983166 ACCCTATGGTGAAACAATACTACTA 57.017 36.000 0.00 0.00 45.58 1.82
2410 2559 6.886178 ACCCTATGGTGAAACAATACTACT 57.114 37.500 0.00 0.00 45.58 2.57
2423 2572 7.582633 TTCACCTACTGAATTTACCCTATGGTG 60.583 40.741 0.00 0.00 38.56 4.17
2424 2573 6.445786 TTCACCTACTGAATTTACCCTATGGT 59.554 38.462 0.00 0.00 40.21 3.55
2425 2574 6.494666 TCACCTACTGAATTTACCCTATGG 57.505 41.667 0.00 0.00 37.80 2.74
2426 2575 8.801882 TTTTCACCTACTGAATTTACCCTATG 57.198 34.615 0.00 0.00 38.74 2.23
2427 2576 9.462606 CTTTTTCACCTACTGAATTTACCCTAT 57.537 33.333 0.00 0.00 38.74 2.57
2428 2577 7.886446 CCTTTTTCACCTACTGAATTTACCCTA 59.114 37.037 0.00 0.00 38.74 3.53
2429 2578 6.719829 CCTTTTTCACCTACTGAATTTACCCT 59.280 38.462 0.00 0.00 38.74 4.34
2430 2579 6.717997 TCCTTTTTCACCTACTGAATTTACCC 59.282 38.462 0.00 0.00 38.74 3.69
2431 2580 7.754851 TCCTTTTTCACCTACTGAATTTACC 57.245 36.000 0.00 0.00 38.74 2.85
2432 2581 8.626526 TGTTCCTTTTTCACCTACTGAATTTAC 58.373 33.333 0.00 0.00 38.74 2.01
2433 2582 8.754991 TGTTCCTTTTTCACCTACTGAATTTA 57.245 30.769 0.00 0.00 38.74 1.40
2434 2583 7.654022 TGTTCCTTTTTCACCTACTGAATTT 57.346 32.000 0.00 0.00 38.74 1.82
2435 2584 7.039714 GGATGTTCCTTTTTCACCTACTGAATT 60.040 37.037 0.00 0.00 34.57 2.17
2436 2585 6.434340 GGATGTTCCTTTTTCACCTACTGAAT 59.566 38.462 0.00 0.00 34.57 2.57
2437 2586 5.768164 GGATGTTCCTTTTTCACCTACTGAA 59.232 40.000 0.00 0.00 33.48 3.02
2438 2587 5.313712 GGATGTTCCTTTTTCACCTACTGA 58.686 41.667 0.00 0.00 32.53 3.41
2439 2588 4.459337 GGGATGTTCCTTTTTCACCTACTG 59.541 45.833 0.00 0.00 36.57 2.74
2440 2589 4.105697 TGGGATGTTCCTTTTTCACCTACT 59.894 41.667 0.00 0.00 36.57 2.57
2441 2590 4.217767 GTGGGATGTTCCTTTTTCACCTAC 59.782 45.833 0.00 0.00 36.57 3.18
2442 2591 4.403734 GTGGGATGTTCCTTTTTCACCTA 58.596 43.478 0.00 0.00 36.57 3.08
2443 2592 3.230976 GTGGGATGTTCCTTTTTCACCT 58.769 45.455 0.00 0.00 36.57 4.00
2444 2593 2.030274 CGTGGGATGTTCCTTTTTCACC 60.030 50.000 0.00 0.00 36.57 4.02
2445 2594 2.607038 GCGTGGGATGTTCCTTTTTCAC 60.607 50.000 0.00 0.00 36.57 3.18
2446 2595 1.611491 GCGTGGGATGTTCCTTTTTCA 59.389 47.619 0.00 0.00 36.57 2.69
2447 2596 1.401018 CGCGTGGGATGTTCCTTTTTC 60.401 52.381 0.00 0.00 36.57 2.29
2448 2597 0.596082 CGCGTGGGATGTTCCTTTTT 59.404 50.000 0.00 0.00 36.57 1.94
2449 2598 1.241315 CCGCGTGGGATGTTCCTTTT 61.241 55.000 7.26 0.00 38.47 2.27
2450 2599 1.674322 CCGCGTGGGATGTTCCTTT 60.674 57.895 7.26 0.00 38.47 3.11
2451 2600 2.046314 CCGCGTGGGATGTTCCTT 60.046 61.111 7.26 0.00 38.47 3.36
2461 2610 0.450184 CCACTTTTTATCCCGCGTGG 59.550 55.000 8.42 8.42 36.36 4.94
2462 2611 1.444836 TCCACTTTTTATCCCGCGTG 58.555 50.000 4.92 0.00 0.00 5.34
2463 2612 2.081462 CTTCCACTTTTTATCCCGCGT 58.919 47.619 4.92 0.00 0.00 6.01
2464 2613 2.352388 TCTTCCACTTTTTATCCCGCG 58.648 47.619 0.00 0.00 0.00 6.46
2465 2614 4.776795 TTTCTTCCACTTTTTATCCCGC 57.223 40.909 0.00 0.00 0.00 6.13
2466 2615 6.569179 TCTTTTCTTCCACTTTTTATCCCG 57.431 37.500 0.00 0.00 0.00 5.14
2472 2621 7.704899 CGTGGTATTTCTTTTCTTCCACTTTTT 59.295 33.333 0.00 0.00 40.82 1.94
2473 2622 7.067737 TCGTGGTATTTCTTTTCTTCCACTTTT 59.932 33.333 0.00 0.00 40.82 2.27
2474 2623 6.544564 TCGTGGTATTTCTTTTCTTCCACTTT 59.455 34.615 0.00 0.00 40.82 2.66
2475 2624 6.059484 TCGTGGTATTTCTTTTCTTCCACTT 58.941 36.000 0.00 0.00 40.82 3.16
2476 2625 5.617252 TCGTGGTATTTCTTTTCTTCCACT 58.383 37.500 0.00 0.00 40.82 4.00
2477 2626 5.934935 TCGTGGTATTTCTTTTCTTCCAC 57.065 39.130 0.00 0.00 39.97 4.02
2478 2627 5.350365 CGATCGTGGTATTTCTTTTCTTCCA 59.650 40.000 7.03 0.00 0.00 3.53
2479 2628 5.579511 TCGATCGTGGTATTTCTTTTCTTCC 59.420 40.000 15.94 0.00 0.00 3.46
2480 2629 6.642683 TCGATCGTGGTATTTCTTTTCTTC 57.357 37.500 15.94 0.00 0.00 2.87
2481 2630 6.456988 GCATCGATCGTGGTATTTCTTTTCTT 60.457 38.462 15.94 0.00 0.00 2.52
2482 2631 5.006746 GCATCGATCGTGGTATTTCTTTTCT 59.993 40.000 15.94 0.00 0.00 2.52
2483 2632 5.198274 GCATCGATCGTGGTATTTCTTTTC 58.802 41.667 15.94 0.00 0.00 2.29
2484 2633 4.634004 TGCATCGATCGTGGTATTTCTTTT 59.366 37.500 15.94 0.00 0.00 2.27
2485 2634 4.188462 TGCATCGATCGTGGTATTTCTTT 58.812 39.130 15.94 0.00 0.00 2.52
2486 2635 3.792401 TGCATCGATCGTGGTATTTCTT 58.208 40.909 15.94 0.00 0.00 2.52
2487 2636 3.452755 TGCATCGATCGTGGTATTTCT 57.547 42.857 15.94 0.00 0.00 2.52
2488 2637 6.408858 AATATGCATCGATCGTGGTATTTC 57.591 37.500 15.94 0.38 0.00 2.17
2489 2638 5.351465 GGAATATGCATCGATCGTGGTATTT 59.649 40.000 15.94 6.08 0.00 1.40
2490 2639 4.870426 GGAATATGCATCGATCGTGGTATT 59.130 41.667 15.94 12.75 0.00 1.89
2491 2640 4.081697 TGGAATATGCATCGATCGTGGTAT 60.082 41.667 15.94 14.77 0.00 2.73
2492 2641 3.257127 TGGAATATGCATCGATCGTGGTA 59.743 43.478 15.94 8.43 0.00 3.25
2493 2642 2.037121 TGGAATATGCATCGATCGTGGT 59.963 45.455 15.94 0.00 0.00 4.16
2494 2643 2.687370 TGGAATATGCATCGATCGTGG 58.313 47.619 15.94 9.59 0.00 4.94
2495 2644 3.989817 TCTTGGAATATGCATCGATCGTG 59.010 43.478 15.94 13.42 0.00 4.35
2496 2645 4.257267 TCTTGGAATATGCATCGATCGT 57.743 40.909 15.94 0.00 0.00 3.73
2497 2646 5.596268 TTTCTTGGAATATGCATCGATCG 57.404 39.130 9.36 9.36 0.00 3.69
2498 2647 7.137490 TCATTTCTTGGAATATGCATCGATC 57.863 36.000 0.19 0.00 0.00 3.69
2499 2648 7.514784 TTCATTTCTTGGAATATGCATCGAT 57.485 32.000 0.19 0.00 0.00 3.59
2500 2649 6.940831 TTCATTTCTTGGAATATGCATCGA 57.059 33.333 0.19 0.00 0.00 3.59
2501 2650 8.080417 AGATTTCATTTCTTGGAATATGCATCG 58.920 33.333 0.19 0.00 33.40 3.84
2502 2651 9.193133 CAGATTTCATTTCTTGGAATATGCATC 57.807 33.333 0.19 0.00 36.12 3.91
2503 2652 8.701895 ACAGATTTCATTTCTTGGAATATGCAT 58.298 29.630 3.79 3.79 43.52 3.96
2504 2653 8.070034 ACAGATTTCATTTCTTGGAATATGCA 57.930 30.769 0.00 0.00 43.52 3.96
2505 2654 7.650903 GGACAGATTTCATTTCTTGGAATATGC 59.349 37.037 2.05 0.00 43.52 3.14
2506 2655 8.910944 AGGACAGATTTCATTTCTTGGAATATG 58.089 33.333 0.83 0.83 44.70 1.78
2507 2656 9.129532 GAGGACAGATTTCATTTCTTGGAATAT 57.870 33.333 0.00 0.00 33.40 1.28
2508 2657 8.108999 TGAGGACAGATTTCATTTCTTGGAATA 58.891 33.333 0.00 0.00 33.40 1.75
2509 2658 6.950041 TGAGGACAGATTTCATTTCTTGGAAT 59.050 34.615 0.00 0.00 36.15 3.01
2510 2659 6.306199 TGAGGACAGATTTCATTTCTTGGAA 58.694 36.000 0.00 0.00 0.00 3.53
2511 2660 5.879763 TGAGGACAGATTTCATTTCTTGGA 58.120 37.500 0.00 0.00 0.00 3.53
2512 2661 5.709164 ACTGAGGACAGATTTCATTTCTTGG 59.291 40.000 0.00 0.00 46.03 3.61
2513 2662 6.609533 CACTGAGGACAGATTTCATTTCTTG 58.390 40.000 0.00 0.00 46.03 3.02
2514 2663 5.182760 GCACTGAGGACAGATTTCATTTCTT 59.817 40.000 0.00 0.00 46.03 2.52
2515 2664 4.699257 GCACTGAGGACAGATTTCATTTCT 59.301 41.667 0.00 0.00 46.03 2.52
2516 2665 4.699257 AGCACTGAGGACAGATTTCATTTC 59.301 41.667 0.00 0.00 46.03 2.17
2517 2666 4.458295 CAGCACTGAGGACAGATTTCATTT 59.542 41.667 0.00 0.00 46.03 2.32
2518 2667 4.008330 CAGCACTGAGGACAGATTTCATT 58.992 43.478 0.00 0.00 46.03 2.57
2519 2668 3.262660 TCAGCACTGAGGACAGATTTCAT 59.737 43.478 0.00 0.00 46.03 2.57
2520 2669 2.634453 TCAGCACTGAGGACAGATTTCA 59.366 45.455 0.00 0.00 46.03 2.69
2521 2670 2.999355 GTCAGCACTGAGGACAGATTTC 59.001 50.000 0.00 0.00 46.03 2.17
2522 2671 2.611473 CGTCAGCACTGAGGACAGATTT 60.611 50.000 13.70 0.00 45.37 2.17
2523 2672 1.067283 CGTCAGCACTGAGGACAGATT 60.067 52.381 13.70 0.00 45.37 2.40
2524 2673 0.529833 CGTCAGCACTGAGGACAGAT 59.470 55.000 13.70 0.00 45.37 2.90
2525 2674 0.823769 ACGTCAGCACTGAGGACAGA 60.824 55.000 23.09 0.00 45.37 3.41
2526 2675 0.387878 GACGTCAGCACTGAGGACAG 60.388 60.000 23.09 6.45 45.37 3.51
2527 2676 1.660355 GACGTCAGCACTGAGGACA 59.340 57.895 23.09 0.00 45.37 4.02
2528 2677 1.080434 GGACGTCAGCACTGAGGAC 60.080 63.158 23.09 17.52 45.37 3.85
2529 2678 1.112916 TTGGACGTCAGCACTGAGGA 61.113 55.000 23.09 2.40 45.37 3.71
2531 2680 1.278172 CGTTGGACGTCAGCACTGAG 61.278 60.000 18.91 0.00 40.75 3.35
2532 2681 1.299850 CGTTGGACGTCAGCACTGA 60.300 57.895 18.91 0.00 36.74 3.41
2533 2682 2.310233 CCGTTGGACGTCAGCACTG 61.310 63.158 18.91 3.15 40.58 3.66
2534 2683 2.029073 CCGTTGGACGTCAGCACT 59.971 61.111 18.91 0.00 40.58 4.40
2535 2684 2.028484 TCCGTTGGACGTCAGCAC 59.972 61.111 18.91 9.26 40.58 4.40
2536 2685 2.028484 GTCCGTTGGACGTCAGCA 59.972 61.111 18.91 3.92 43.14 4.41
2544 2693 2.029964 GCCGTCAAGTCCGTTGGA 59.970 61.111 0.00 0.00 36.71 3.53
2545 2694 3.047877 GGCCGTCAAGTCCGTTGG 61.048 66.667 0.00 0.00 36.71 3.77
2546 2695 3.411351 CGGCCGTCAAGTCCGTTG 61.411 66.667 19.50 0.00 38.47 4.10
2547 2696 3.569049 CTCGGCCGTCAAGTCCGTT 62.569 63.158 27.15 0.00 43.35 4.44
2548 2697 4.052229 CTCGGCCGTCAAGTCCGT 62.052 66.667 27.15 0.00 43.35 4.69
2560 2709 3.064324 ATTGCTGGTTGGCTCGGC 61.064 61.111 0.00 0.00 37.06 5.54
2561 2710 1.526575 AACATTGCTGGTTGGCTCGG 61.527 55.000 0.00 0.00 0.00 4.63
2562 2711 0.314935 AAACATTGCTGGTTGGCTCG 59.685 50.000 0.00 0.00 28.79 5.03
2563 2712 2.558359 AGTAAACATTGCTGGTTGGCTC 59.442 45.455 0.00 0.00 33.33 4.70
2564 2713 2.297033 CAGTAAACATTGCTGGTTGGCT 59.703 45.455 0.87 0.00 39.36 4.75
2565 2714 2.676076 CAGTAAACATTGCTGGTTGGC 58.324 47.619 0.87 0.00 39.36 4.52
2571 2720 4.614993 CGGTTAACCCAGTAAACATTGCTG 60.615 45.833 19.09 1.76 42.18 4.41
2572 2721 3.504520 CGGTTAACCCAGTAAACATTGCT 59.495 43.478 19.09 0.00 0.00 3.91
2573 2722 3.828786 CGGTTAACCCAGTAAACATTGC 58.171 45.455 19.09 0.00 0.00 3.56
2574 2723 3.366577 GGCGGTTAACCCAGTAAACATTG 60.367 47.826 19.09 1.42 0.00 2.82
2575 2724 2.821378 GGCGGTTAACCCAGTAAACATT 59.179 45.455 19.09 0.00 0.00 2.71
2576 2725 2.439409 GGCGGTTAACCCAGTAAACAT 58.561 47.619 19.09 0.00 0.00 2.71
2577 2726 1.877258 CGGCGGTTAACCCAGTAAACA 60.877 52.381 19.09 0.00 0.00 2.83
2578 2727 0.798159 CGGCGGTTAACCCAGTAAAC 59.202 55.000 19.09 1.10 0.00 2.01
2579 2728 0.683973 TCGGCGGTTAACCCAGTAAA 59.316 50.000 19.09 0.00 0.00 2.01
2580 2729 0.683973 TTCGGCGGTTAACCCAGTAA 59.316 50.000 19.09 6.10 0.00 2.24
2581 2730 0.903942 ATTCGGCGGTTAACCCAGTA 59.096 50.000 19.09 6.99 0.00 2.74
2582 2731 0.903942 TATTCGGCGGTTAACCCAGT 59.096 50.000 19.09 2.43 0.00 4.00
2583 2732 2.027003 TTATTCGGCGGTTAACCCAG 57.973 50.000 19.09 12.06 0.00 4.45
2584 2733 2.486472 TTTATTCGGCGGTTAACCCA 57.514 45.000 19.09 0.00 0.00 4.51
2585 2734 2.478370 GCTTTTATTCGGCGGTTAACCC 60.478 50.000 19.09 11.33 0.00 4.11
2586 2735 2.162008 TGCTTTTATTCGGCGGTTAACC 59.838 45.455 15.13 15.13 0.00 2.85
2587 2736 3.474693 TGCTTTTATTCGGCGGTTAAC 57.525 42.857 7.21 0.00 0.00 2.01
2588 2737 7.523219 CATATATGCTTTTATTCGGCGGTTAA 58.477 34.615 7.21 2.50 0.00 2.01
2589 2738 7.067532 CATATATGCTTTTATTCGGCGGTTA 57.932 36.000 7.21 0.00 0.00 2.85
2590 2739 5.938322 CATATATGCTTTTATTCGGCGGTT 58.062 37.500 7.21 0.00 0.00 4.44
2591 2740 5.545658 CATATATGCTTTTATTCGGCGGT 57.454 39.130 7.21 0.00 0.00 5.68
2612 2761 9.554395 TCTCATATTTTTATGAACGGAATAGCA 57.446 29.630 0.00 0.00 36.18 3.49
2645 2794 9.108111 TGGTACGGAGGGAATAATAAAATATCT 57.892 33.333 0.00 0.00 0.00 1.98
2646 2795 9.901172 ATGGTACGGAGGGAATAATAAAATATC 57.099 33.333 0.00 0.00 0.00 1.63
2652 2801 9.551339 AGTAATATGGTACGGAGGGAATAATAA 57.449 33.333 0.00 0.00 0.00 1.40
2653 2802 9.193806 GAGTAATATGGTACGGAGGGAATAATA 57.806 37.037 0.00 0.00 0.00 0.98
2654 2803 7.125356 GGAGTAATATGGTACGGAGGGAATAAT 59.875 40.741 0.00 0.00 0.00 1.28
2655 2804 6.438425 GGAGTAATATGGTACGGAGGGAATAA 59.562 42.308 0.00 0.00 0.00 1.40
2656 2805 5.954150 GGAGTAATATGGTACGGAGGGAATA 59.046 44.000 0.00 0.00 0.00 1.75
2657 2806 4.776308 GGAGTAATATGGTACGGAGGGAAT 59.224 45.833 0.00 0.00 0.00 3.01
2658 2807 4.154942 GGAGTAATATGGTACGGAGGGAA 58.845 47.826 0.00 0.00 0.00 3.97
2659 2808 3.501019 GGGAGTAATATGGTACGGAGGGA 60.501 52.174 0.00 0.00 0.00 4.20
2660 2809 2.830321 GGGAGTAATATGGTACGGAGGG 59.170 54.545 0.00 0.00 0.00 4.30
2661 2810 3.762823 GAGGGAGTAATATGGTACGGAGG 59.237 52.174 0.00 0.00 0.00 4.30
2662 2811 3.762823 GGAGGGAGTAATATGGTACGGAG 59.237 52.174 0.00 0.00 0.00 4.63
2663 2812 3.771216 GGAGGGAGTAATATGGTACGGA 58.229 50.000 0.00 0.00 0.00 4.69
2664 2813 2.490903 CGGAGGGAGTAATATGGTACGG 59.509 54.545 0.00 0.00 0.00 4.02
2665 2814 3.152341 ACGGAGGGAGTAATATGGTACG 58.848 50.000 0.00 0.00 0.00 3.67
2666 2815 4.021632 GGAACGGAGGGAGTAATATGGTAC 60.022 50.000 0.00 0.00 0.00 3.34
2667 2816 4.140853 AGGAACGGAGGGAGTAATATGGTA 60.141 45.833 0.00 0.00 0.00 3.25
2668 2817 2.970640 GGAACGGAGGGAGTAATATGGT 59.029 50.000 0.00 0.00 0.00 3.55
2669 2818 3.240302 AGGAACGGAGGGAGTAATATGG 58.760 50.000 0.00 0.00 0.00 2.74
2670 2819 6.415206 TTTAGGAACGGAGGGAGTAATATG 57.585 41.667 0.00 0.00 0.00 1.78
2671 2820 8.912614 ATATTTAGGAACGGAGGGAGTAATAT 57.087 34.615 0.00 0.00 0.00 1.28
2672 2821 9.827198 TTATATTTAGGAACGGAGGGAGTAATA 57.173 33.333 0.00 0.00 0.00 0.98
2673 2822 8.731591 TTATATTTAGGAACGGAGGGAGTAAT 57.268 34.615 0.00 0.00 0.00 1.89
2674 2823 7.786464 ACTTATATTTAGGAACGGAGGGAGTAA 59.214 37.037 0.00 0.00 0.00 2.24
2675 2824 7.300658 ACTTATATTTAGGAACGGAGGGAGTA 58.699 38.462 0.00 0.00 0.00 2.59
2676 2825 6.141790 ACTTATATTTAGGAACGGAGGGAGT 58.858 40.000 0.00 0.00 0.00 3.85
2677 2826 6.494146 AGACTTATATTTAGGAACGGAGGGAG 59.506 42.308 0.00 0.00 0.00 4.30
2678 2827 6.379579 AGACTTATATTTAGGAACGGAGGGA 58.620 40.000 0.00 0.00 0.00 4.20
2679 2828 6.667558 AGACTTATATTTAGGAACGGAGGG 57.332 41.667 0.00 0.00 0.00 4.30


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.