Multiple sequence alignment - TraesCS5D01G066500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G066500 chr5D 100.000 2426 0 0 1 2426 61839255 61836830 0.000000e+00 4481.0
1 TraesCS5D01G066500 chr5D 90.112 890 61 22 480 1351 62132202 62131322 0.000000e+00 1131.0
2 TraesCS5D01G066500 chr5D 89.655 377 36 3 455 830 62134244 62133870 6.070000e-131 477.0
3 TraesCS5D01G066500 chr5D 80.769 624 78 25 849 1454 61792722 61792123 1.320000e-122 449.0
4 TraesCS5D01G066500 chr5D 90.476 336 31 1 1 336 62134640 62134306 2.210000e-120 442.0
5 TraesCS5D01G066500 chr5D 88.715 319 30 1 1 319 62132512 62132200 3.780000e-103 385.0
6 TraesCS5D01G066500 chr5D 89.474 266 21 3 1347 1611 62131275 62131016 1.800000e-86 329.0
7 TraesCS5D01G066500 chr5D 90.732 205 18 1 2089 2292 62130930 62130726 3.070000e-69 272.0
8 TraesCS5D01G066500 chr5D 88.350 206 22 2 2089 2292 93604899 93604694 1.860000e-61 246.0
9 TraesCS5D01G066500 chr5D 85.714 84 8 3 1772 1851 62131008 62130925 4.300000e-13 86.1
10 TraesCS5D01G066500 chr5D 94.231 52 2 1 2288 2338 124915494 124915545 7.190000e-11 78.7
11 TraesCS5D01G066500 chr5B 90.023 872 71 13 478 1339 68370753 68371618 0.000000e+00 1114.0
12 TraesCS5D01G066500 chr5B 91.443 409 32 3 480 887 68410343 68410749 2.110000e-155 558.0
13 TraesCS5D01G066500 chr5B 88.441 372 34 6 977 1339 68420911 68421282 7.960000e-120 440.0
14 TraesCS5D01G066500 chr5B 89.342 319 32 2 2 319 68410028 68410345 1.350000e-107 399.0
15 TraesCS5D01G066500 chr5B 84.330 351 44 5 486 826 68380896 68381245 1.390000e-87 333.0
16 TraesCS5D01G066500 chr5B 88.806 268 22 3 1344 1611 68371677 68371936 3.010000e-84 322.0
17 TraesCS5D01G066500 chr5B 85.220 318 39 2 1 318 68370444 68370753 1.080000e-83 320.0
18 TraesCS5D01G066500 chr5B 94.578 166 8 1 316 481 547022977 547022813 3.100000e-64 255.0
19 TraesCS5D01G066500 chr5B 91.429 175 15 0 2090 2264 68372022 68372196 8.670000e-60 241.0
20 TraesCS5D01G066500 chr5B 78.652 356 41 14 483 826 68367975 68368307 1.140000e-48 204.0
21 TraesCS5D01G066500 chr5B 89.333 150 16 0 1613 1762 634336713 634336564 3.180000e-44 189.0
22 TraesCS5D01G066500 chr5B 80.156 257 28 9 486 735 68363279 68363519 1.150000e-38 171.0
23 TraesCS5D01G066500 chr5B 82.716 81 12 2 1772 1850 68371944 68372024 1.200000e-08 71.3
24 TraesCS5D01G066500 chr5A 86.887 999 58 22 480 1454 51810376 51809427 0.000000e+00 1051.0
25 TraesCS5D01G066500 chr5A 89.573 844 60 18 522 1353 52006980 52006153 0.000000e+00 1046.0
26 TraesCS5D01G066500 chr5A 96.215 317 12 0 3 319 51810690 51810374 9.940000e-144 520.0
27 TraesCS5D01G066500 chr5A 83.148 540 67 15 878 1405 51792543 51792016 2.820000e-129 472.0
28 TraesCS5D01G066500 chr5A 87.461 319 36 4 1 319 52041938 52041624 4.930000e-97 364.0
29 TraesCS5D01G066500 chr5A 87.097 279 19 8 1344 1611 52006110 52005838 1.410000e-77 300.0
30 TraesCS5D01G066500 chr5A 88.780 205 22 1 2089 2292 51808950 51808746 1.440000e-62 250.0
31 TraesCS5D01G066500 chr5A 88.293 205 23 1 2089 2292 52005754 52005550 6.700000e-61 244.0
32 TraesCS5D01G066500 chr5A 92.405 158 11 1 1453 1610 51809183 51809027 8.730000e-55 224.0
33 TraesCS5D01G066500 chr5A 77.410 332 41 17 486 811 51883571 51883268 1.490000e-37 167.0
34 TraesCS5D01G066500 chr5A 87.805 82 8 2 1772 1851 52005830 52005749 7.140000e-16 95.3
35 TraesCS5D01G066500 chrUn 82.625 541 68 15 878 1405 65979918 65979391 2.840000e-124 455.0
36 TraesCS5D01G066500 chrUn 81.551 477 63 18 937 1396 337950337 337950805 1.060000e-98 370.0
37 TraesCS5D01G066500 chrUn 95.210 167 8 0 315 481 74119449 74119615 5.140000e-67 265.0
38 TraesCS5D01G066500 chrUn 93.750 64 2 2 2351 2414 53488788 53488849 7.140000e-16 95.3
39 TraesCS5D01G066500 chrUn 93.750 64 2 2 2351 2414 53490775 53490836 7.140000e-16 95.3
40 TraesCS5D01G066500 chr6B 95.152 165 8 0 317 481 226362480 226362644 6.650000e-66 261.0
41 TraesCS5D01G066500 chr6B 93.529 170 9 2 313 481 15257857 15258025 4.000000e-63 252.0
42 TraesCS5D01G066500 chr6B 94.118 51 3 0 2282 2332 48874030 48874080 7.190000e-11 78.7
43 TraesCS5D01G066500 chr2A 86.611 239 22 8 1849 2084 715268165 715268396 3.100000e-64 255.0
44 TraesCS5D01G066500 chr2A 86.538 156 18 3 2087 2241 447003351 447003504 4.150000e-38 169.0
45 TraesCS5D01G066500 chr2A 86.250 80 10 1 2348 2426 12134937 12135016 4.300000e-13 86.1
46 TraesCS5D01G066500 chr7D 94.012 167 10 0 315 481 404628500 404628666 1.110000e-63 254.0
47 TraesCS5D01G066500 chr7B 93.976 166 10 0 317 482 151286607 151286442 4.000000e-63 252.0
48 TraesCS5D01G066500 chr7B 82.731 249 29 11 1850 2095 446140633 446140396 2.440000e-50 209.0
49 TraesCS5D01G066500 chr7B 82.684 231 32 6 1851 2078 454528361 454528586 5.290000e-47 198.0
50 TraesCS5D01G066500 chr7B 89.404 151 16 0 1613 1763 431306558 431306708 8.850000e-45 191.0
51 TraesCS5D01G066500 chr7B 81.991 211 30 6 2087 2292 26692829 26693036 3.210000e-39 172.0
52 TraesCS5D01G066500 chr7B 92.857 56 3 1 2290 2344 566635044 566634989 2.000000e-11 80.5
53 TraesCS5D01G066500 chr3A 93.064 173 11 1 310 482 585605632 585605803 4.000000e-63 252.0
54 TraesCS5D01G066500 chr3A 83.333 234 29 7 1855 2086 551411855 551412080 8.790000e-50 207.0
55 TraesCS5D01G066500 chr3A 90.728 151 14 0 1613 1763 716524594 716524444 4.090000e-48 202.0
56 TraesCS5D01G066500 chr3A 90.260 154 15 0 1610 1763 740105561 740105714 4.090000e-48 202.0
57 TraesCS5D01G066500 chr3A 88.742 151 17 0 1613 1763 362330155 362330305 4.120000e-43 185.0
58 TraesCS5D01G066500 chr2D 93.023 172 11 1 310 481 182734025 182733855 1.440000e-62 250.0
59 TraesCS5D01G066500 chr2D 78.348 351 59 14 2087 2426 398065040 398065384 6.800000e-51 211.0
60 TraesCS5D01G066500 chr2D 81.746 252 31 9 1846 2093 86490866 86490626 1.900000e-46 196.0
61 TraesCS5D01G066500 chr2D 85.714 98 13 1 2329 2425 336734532 336734629 4.270000e-18 102.0
62 TraesCS5D01G066500 chr2D 92.857 56 3 1 2278 2332 594456994 594457049 2.000000e-11 80.5
63 TraesCS5D01G066500 chr4D 91.667 180 12 1 306 482 93079190 93079369 1.860000e-61 246.0
64 TraesCS5D01G066500 chr2B 85.537 242 28 5 1849 2087 693317175 693317412 1.860000e-61 246.0
65 TraesCS5D01G066500 chr2B 84.711 242 22 11 1850 2087 667259425 667259195 6.750000e-56 228.0
66 TraesCS5D01G066500 chr2B 82.377 244 34 8 1846 2086 492706751 492706514 1.140000e-48 204.0
67 TraesCS5D01G066500 chr2B 89.032 155 17 0 1613 1767 767650600 767650446 2.460000e-45 193.0
68 TraesCS5D01G066500 chr7A 84.783 230 27 7 1852 2076 490271187 490270961 8.730000e-55 224.0
69 TraesCS5D01G066500 chr7A 86.624 157 20 1 2087 2242 82177928 82178084 3.210000e-39 172.0
70 TraesCS5D01G066500 chr7A 92.982 57 3 1 2286 2341 629046981 629047037 5.560000e-12 82.4
71 TraesCS5D01G066500 chr4B 90.196 153 15 0 1613 1765 627317218 627317370 1.470000e-47 200.0
72 TraesCS5D01G066500 chr4A 77.233 347 61 16 2087 2420 436830010 436830351 1.150000e-43 187.0
73 TraesCS5D01G066500 chr6D 91.150 113 10 0 1651 1763 36691592 36691704 1.160000e-33 154.0
74 TraesCS5D01G066500 chr6D 86.567 67 5 4 2273 2338 49869814 49869751 1.200000e-08 71.3
75 TraesCS5D01G066500 chr6A 96.078 51 2 0 2282 2332 536234017 536233967 1.550000e-12 84.2
76 TraesCS5D01G066500 chr3B 96.000 50 1 1 2289 2337 822885353 822885402 2.000000e-11 80.5
77 TraesCS5D01G066500 chr1D 88.060 67 4 4 2270 2333 329729649 329729714 2.590000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G066500 chr5D 61836830 61839255 2425 True 4481.000000 4481 100.000000 1 2426 1 chr5D.!!$R2 2425
1 TraesCS5D01G066500 chr5D 61792123 61792722 599 True 449.000000 449 80.769000 849 1454 1 chr5D.!!$R1 605
2 TraesCS5D01G066500 chr5D 62130726 62134640 3914 True 446.014286 1131 89.268286 1 2292 7 chr5D.!!$R4 2291
3 TraesCS5D01G066500 chr5B 68410028 68410749 721 False 478.500000 558 90.392500 2 887 2 chr5B.!!$F5 885
4 TraesCS5D01G066500 chr5B 68367975 68372196 4221 False 378.716667 1114 86.141000 1 2264 6 chr5B.!!$F4 2263
5 TraesCS5D01G066500 chr5A 51808746 51810690 1944 True 511.250000 1051 91.071750 3 2292 4 chr5A.!!$R4 2289
6 TraesCS5D01G066500 chr5A 51792016 51792543 527 True 472.000000 472 83.148000 878 1405 1 chr5A.!!$R1 527
7 TraesCS5D01G066500 chr5A 52005550 52006980 1430 True 421.325000 1046 88.192000 522 2292 4 chr5A.!!$R5 1770
8 TraesCS5D01G066500 chrUn 65979391 65979918 527 True 455.000000 455 82.625000 878 1405 1 chrUn.!!$R1 527

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
100 2570 0.89694 ACCATGCAAGCTTGAGGTGG 60.897 55.0 30.39 29.37 34.09 4.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1679 6644 0.03601 ATCAGTTGAGTTCGCCTGGG 60.036 55.0 0.0 0.0 0.0 4.45 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
100 2570 0.896940 ACCATGCAAGCTTGAGGTGG 60.897 55.000 30.39 29.37 34.09 4.61
163 4755 6.348498 TGATTCATGTTACAATGATCCGACT 58.652 36.000 0.00 0.00 36.48 4.18
201 4793 3.114616 CGACTCGCAACCCAGCTG 61.115 66.667 6.78 6.78 0.00 4.24
202 4794 2.343758 GACTCGCAACCCAGCTGA 59.656 61.111 17.39 0.00 0.00 4.26
203 4795 1.078848 GACTCGCAACCCAGCTGAT 60.079 57.895 17.39 0.00 0.00 2.90
204 4796 1.078848 ACTCGCAACCCAGCTGATC 60.079 57.895 17.39 0.00 0.00 2.92
205 4797 1.220206 CTCGCAACCCAGCTGATCT 59.780 57.895 17.39 0.00 0.00 2.75
277 4876 5.862323 GCGACTAATTTAATCAGAGGCGATA 59.138 40.000 12.04 0.00 41.23 2.92
326 4925 8.804204 ACTAATGATAAAATACTACTCCCTCCG 58.196 37.037 0.00 0.00 0.00 4.63
327 4926 7.613551 AATGATAAAATACTACTCCCTCCGT 57.386 36.000 0.00 0.00 0.00 4.69
328 4927 7.613551 ATGATAAAATACTACTCCCTCCGTT 57.386 36.000 0.00 0.00 0.00 4.44
329 4928 7.427989 TGATAAAATACTACTCCCTCCGTTT 57.572 36.000 0.00 0.00 0.00 3.60
330 4929 7.495055 TGATAAAATACTACTCCCTCCGTTTC 58.505 38.462 0.00 0.00 0.00 2.78
331 4930 7.343833 TGATAAAATACTACTCCCTCCGTTTCT 59.656 37.037 0.00 0.00 0.00 2.52
332 4931 8.773033 ATAAAATACTACTCCCTCCGTTTCTA 57.227 34.615 0.00 0.00 0.00 2.10
333 4932 7.486407 AAAATACTACTCCCTCCGTTTCTAA 57.514 36.000 0.00 0.00 0.00 2.10
334 4933 7.486407 AAATACTACTCCCTCCGTTTCTAAA 57.514 36.000 0.00 0.00 0.00 1.85
335 4934 7.672122 AATACTACTCCCTCCGTTTCTAAAT 57.328 36.000 0.00 0.00 0.00 1.40
336 4935 8.773033 AATACTACTCCCTCCGTTTCTAAATA 57.227 34.615 0.00 0.00 0.00 1.40
337 4936 8.953223 ATACTACTCCCTCCGTTTCTAAATAT 57.047 34.615 0.00 0.00 0.00 1.28
338 4937 7.672122 ACTACTCCCTCCGTTTCTAAATATT 57.328 36.000 0.00 0.00 0.00 1.28
339 4938 8.087303 ACTACTCCCTCCGTTTCTAAATATTT 57.913 34.615 5.89 5.89 0.00 1.40
340 4939 7.985752 ACTACTCCCTCCGTTTCTAAATATTTG 59.014 37.037 11.05 1.65 0.00 2.32
341 4940 6.718294 ACTCCCTCCGTTTCTAAATATTTGT 58.282 36.000 11.05 0.00 0.00 2.83
342 4941 6.822170 ACTCCCTCCGTTTCTAAATATTTGTC 59.178 38.462 11.05 0.00 0.00 3.18
343 4942 6.954232 TCCCTCCGTTTCTAAATATTTGTCT 58.046 36.000 11.05 0.00 0.00 3.41
344 4943 7.399634 TCCCTCCGTTTCTAAATATTTGTCTT 58.600 34.615 11.05 0.00 0.00 3.01
345 4944 7.886446 TCCCTCCGTTTCTAAATATTTGTCTTT 59.114 33.333 11.05 0.00 0.00 2.52
346 4945 8.182227 CCCTCCGTTTCTAAATATTTGTCTTTC 58.818 37.037 11.05 0.00 0.00 2.62
347 4946 8.947115 CCTCCGTTTCTAAATATTTGTCTTTCT 58.053 33.333 11.05 0.00 0.00 2.52
367 4966 9.436957 TCTTTCTAGACATTTCAAATGGACTAC 57.563 33.333 14.70 1.26 0.00 2.73
368 4967 8.561738 TTTCTAGACATTTCAAATGGACTACC 57.438 34.615 14.70 0.00 0.00 3.18
386 4985 9.462606 TGGACTACCACATATAGATGTATGTAG 57.537 37.037 24.03 24.03 44.82 2.74
387 4986 9.682465 GGACTACCACATATAGATGTATGTAGA 57.318 37.037 28.41 9.10 44.82 2.59
421 5020 8.940768 AGAGTGTAGATTCTCTTATTTTGCTC 57.059 34.615 0.00 0.00 37.72 4.26
422 5021 7.984617 AGAGTGTAGATTCTCTTATTTTGCTCC 59.015 37.037 0.00 0.00 37.72 4.70
423 5022 6.758886 AGTGTAGATTCTCTTATTTTGCTCCG 59.241 38.462 0.00 0.00 0.00 4.63
424 5023 6.535508 GTGTAGATTCTCTTATTTTGCTCCGT 59.464 38.462 0.00 0.00 0.00 4.69
425 5024 7.705325 GTGTAGATTCTCTTATTTTGCTCCGTA 59.295 37.037 0.00 0.00 0.00 4.02
426 5025 8.421784 TGTAGATTCTCTTATTTTGCTCCGTAT 58.578 33.333 0.00 0.00 0.00 3.06
427 5026 7.721286 AGATTCTCTTATTTTGCTCCGTATG 57.279 36.000 0.00 0.00 0.00 2.39
428 5027 7.275920 AGATTCTCTTATTTTGCTCCGTATGT 58.724 34.615 0.00 0.00 0.00 2.29
429 5028 8.421784 AGATTCTCTTATTTTGCTCCGTATGTA 58.578 33.333 0.00 0.00 0.00 2.29
430 5029 8.594881 ATTCTCTTATTTTGCTCCGTATGTAG 57.405 34.615 0.00 0.00 0.00 2.74
431 5030 7.108841 TCTCTTATTTTGCTCCGTATGTAGT 57.891 36.000 0.00 0.00 0.00 2.73
432 5031 7.201145 TCTCTTATTTTGCTCCGTATGTAGTC 58.799 38.462 0.00 0.00 0.00 2.59
433 5032 6.278363 TCTTATTTTGCTCCGTATGTAGTCC 58.722 40.000 0.00 0.00 0.00 3.85
434 5033 4.755266 ATTTTGCTCCGTATGTAGTCCT 57.245 40.909 0.00 0.00 0.00 3.85
435 5034 4.546829 TTTTGCTCCGTATGTAGTCCTT 57.453 40.909 0.00 0.00 0.00 3.36
436 5035 4.546829 TTTGCTCCGTATGTAGTCCTTT 57.453 40.909 0.00 0.00 0.00 3.11
437 5036 3.520290 TGCTCCGTATGTAGTCCTTTG 57.480 47.619 0.00 0.00 0.00 2.77
438 5037 2.829720 TGCTCCGTATGTAGTCCTTTGT 59.170 45.455 0.00 0.00 0.00 2.83
439 5038 3.259876 TGCTCCGTATGTAGTCCTTTGTT 59.740 43.478 0.00 0.00 0.00 2.83
440 5039 3.617263 GCTCCGTATGTAGTCCTTTGTTG 59.383 47.826 0.00 0.00 0.00 3.33
441 5040 4.619863 GCTCCGTATGTAGTCCTTTGTTGA 60.620 45.833 0.00 0.00 0.00 3.18
442 5041 5.471556 TCCGTATGTAGTCCTTTGTTGAA 57.528 39.130 0.00 0.00 0.00 2.69
443 5042 5.856156 TCCGTATGTAGTCCTTTGTTGAAA 58.144 37.500 0.00 0.00 0.00 2.69
444 5043 6.469410 TCCGTATGTAGTCCTTTGTTGAAAT 58.531 36.000 0.00 0.00 0.00 2.17
445 5044 7.613585 TCCGTATGTAGTCCTTTGTTGAAATA 58.386 34.615 0.00 0.00 0.00 1.40
446 5045 8.262227 TCCGTATGTAGTCCTTTGTTGAAATAT 58.738 33.333 0.00 0.00 0.00 1.28
447 5046 8.889717 CCGTATGTAGTCCTTTGTTGAAATATT 58.110 33.333 0.00 0.00 0.00 1.28
475 5074 8.947115 AGAAAGACAAATATTTAGAAACGGAGG 58.053 33.333 0.00 0.00 0.00 4.30
476 5075 7.625828 AAGACAAATATTTAGAAACGGAGGG 57.374 36.000 0.00 0.00 0.00 4.30
477 5076 6.954232 AGACAAATATTTAGAAACGGAGGGA 58.046 36.000 0.00 0.00 0.00 4.20
484 5083 1.264295 AGAAACGGAGGGAGTACACC 58.736 55.000 0.00 0.00 0.00 4.16
572 5171 9.995003 TGCCAAATCTGAAGTTTTAAATACAAT 57.005 25.926 0.00 0.00 0.00 2.71
579 5178 7.806014 TCTGAAGTTTTAAATACAATGGTTCGC 59.194 33.333 0.00 0.00 0.00 4.70
759 5359 2.677524 GGATTGCACTGCCAGGCA 60.678 61.111 15.23 15.23 38.46 4.75
806 5406 3.435275 TGTGCTGGAGTTCTACTCATCT 58.565 45.455 8.89 0.00 46.79 2.90
830 5430 5.186021 TCCTTCTCTGCTTTTAGGAGTAGTG 59.814 44.000 0.00 0.00 35.01 2.74
831 5431 5.186021 CCTTCTCTGCTTTTAGGAGTAGTGA 59.814 44.000 0.00 0.00 35.01 3.41
832 5432 6.295349 CCTTCTCTGCTTTTAGGAGTAGTGAA 60.295 42.308 7.09 7.09 38.57 3.18
833 5433 6.665992 TCTCTGCTTTTAGGAGTAGTGAAA 57.334 37.500 0.00 0.00 35.01 2.69
834 5434 7.246171 TCTCTGCTTTTAGGAGTAGTGAAAT 57.754 36.000 0.00 0.00 35.01 2.17
835 5435 8.362464 TCTCTGCTTTTAGGAGTAGTGAAATA 57.638 34.615 0.00 0.00 35.01 1.40
836 5436 8.251721 TCTCTGCTTTTAGGAGTAGTGAAATAC 58.748 37.037 0.00 0.00 35.01 1.89
837 5437 8.135382 TCTGCTTTTAGGAGTAGTGAAATACT 57.865 34.615 0.00 0.00 38.72 2.12
916 5538 5.134725 AGGAGATGTGCCCATAGAAATTT 57.865 39.130 0.00 0.00 0.00 1.82
917 5539 6.266131 AGGAGATGTGCCCATAGAAATTTA 57.734 37.500 0.00 0.00 0.00 1.40
918 5540 6.856757 AGGAGATGTGCCCATAGAAATTTAT 58.143 36.000 0.00 0.00 0.00 1.40
919 5541 7.300658 AGGAGATGTGCCCATAGAAATTTATT 58.699 34.615 0.00 0.00 0.00 1.40
921 5543 8.515414 GGAGATGTGCCCATAGAAATTTATTAC 58.485 37.037 0.00 0.00 0.00 1.89
967 5591 4.339247 CCAATAATTCCAACTGGTGCCTAG 59.661 45.833 0.00 0.00 36.34 3.02
1051 5688 6.518208 TTCTAGCCAACTTCTCTCTTACTC 57.482 41.667 0.00 0.00 0.00 2.59
1052 5692 5.571285 TCTAGCCAACTTCTCTCTTACTCA 58.429 41.667 0.00 0.00 0.00 3.41
1178 5818 1.143838 CGGGCAAGTCGATGATCCA 59.856 57.895 0.00 0.00 0.00 3.41
1207 5853 2.581246 AGGAAGGAGGGTTTTATGGGTC 59.419 50.000 0.00 0.00 0.00 4.46
1212 5858 3.660669 AGGAGGGTTTTATGGGTCAAGAA 59.339 43.478 0.00 0.00 0.00 2.52
1250 5896 3.781307 CTCATGGACCGCCGGGAA 61.781 66.667 8.57 0.00 36.79 3.97
1330 5976 0.034059 CTCGATGGTCATGGGGTAGC 59.966 60.000 0.00 0.00 0.00 3.58
1352 6054 4.576053 GCATTTTGCTTTGGACTTTCCTTT 59.424 37.500 0.00 0.00 40.96 3.11
1369 6071 2.104792 CCTTTCTCTGTTGTCCTGTCCA 59.895 50.000 0.00 0.00 0.00 4.02
1387 6091 7.339212 TCCTGTCCAAGATTTGTATTATTGTGG 59.661 37.037 0.00 0.00 0.00 4.17
1407 6120 6.119536 TGTGGTCATGTTATATTCTTGTCCC 58.880 40.000 0.00 0.00 0.00 4.46
1408 6121 6.119536 GTGGTCATGTTATATTCTTGTCCCA 58.880 40.000 0.00 0.00 0.00 4.37
1409 6122 6.772716 GTGGTCATGTTATATTCTTGTCCCAT 59.227 38.462 0.00 0.00 0.00 4.00
1410 6123 7.285401 GTGGTCATGTTATATTCTTGTCCCATT 59.715 37.037 0.00 0.00 0.00 3.16
1450 6167 7.436118 AGCTTGTGTGTGTCATGATTAATTTT 58.564 30.769 0.00 0.00 0.00 1.82
1501 6466 5.329493 CGTGTGTTAGTAGATGAATCACGA 58.671 41.667 7.88 0.00 45.36 4.35
1532 6497 0.036732 ATGCAATCCGTCCGCCATAT 59.963 50.000 0.00 0.00 0.00 1.78
1590 6555 2.187946 CATGGGAGGTCTCGTGCC 59.812 66.667 0.00 0.00 0.00 5.01
1593 6558 2.680352 GGGAGGTCTCGTGCCTGA 60.680 66.667 5.40 0.00 36.29 3.86
1612 6577 8.078596 GTGCCTGAATTAGTCCATTGATTATTC 58.921 37.037 0.00 0.00 0.00 1.75
1613 6578 7.041167 TGCCTGAATTAGTCCATTGATTATTCG 60.041 37.037 0.00 0.00 0.00 3.34
1614 6579 7.173218 GCCTGAATTAGTCCATTGATTATTCGA 59.827 37.037 0.00 0.00 0.00 3.71
1615 6580 9.056005 CCTGAATTAGTCCATTGATTATTCGAA 57.944 33.333 0.00 0.00 0.00 3.71
1624 6589 9.793245 GTCCATTGATTATTCGAAATTACTACG 57.207 33.333 0.00 0.00 0.00 3.51
1625 6590 8.492748 TCCATTGATTATTCGAAATTACTACGC 58.507 33.333 0.00 0.00 0.00 4.42
1626 6591 8.279800 CCATTGATTATTCGAAATTACTACGCA 58.720 33.333 0.00 0.00 0.00 5.24
1627 6592 9.092322 CATTGATTATTCGAAATTACTACGCAC 57.908 33.333 0.00 0.00 0.00 5.34
1628 6593 7.758613 TGATTATTCGAAATTACTACGCACA 57.241 32.000 0.00 0.00 0.00 4.57
1629 6594 7.614908 TGATTATTCGAAATTACTACGCACAC 58.385 34.615 0.00 0.00 0.00 3.82
1631 6596 3.200294 TCGAAATTACTACGCACACGA 57.800 42.857 0.00 0.00 43.93 4.35
1632 6597 2.910482 TCGAAATTACTACGCACACGAC 59.090 45.455 0.00 0.00 43.93 4.34
1633 6598 2.657848 CGAAATTACTACGCACACGACA 59.342 45.455 0.00 0.00 43.93 4.35
1634 6599 3.119956 CGAAATTACTACGCACACGACAA 59.880 43.478 0.00 0.00 43.93 3.18
1635 6600 4.201551 CGAAATTACTACGCACACGACAAT 60.202 41.667 0.00 0.00 43.93 2.71
1636 6601 4.577687 AATTACTACGCACACGACAATG 57.422 40.909 0.00 0.00 43.93 2.82
1637 6602 2.710220 TACTACGCACACGACAATGT 57.290 45.000 0.00 0.00 43.93 2.71
1638 6603 1.860676 ACTACGCACACGACAATGTT 58.139 45.000 0.00 0.00 43.93 2.71
1639 6604 1.790623 ACTACGCACACGACAATGTTC 59.209 47.619 0.00 0.00 43.93 3.18
1640 6605 2.058798 CTACGCACACGACAATGTTCT 58.941 47.619 0.00 0.00 43.93 3.01
1641 6606 0.581529 ACGCACACGACAATGTTCTG 59.418 50.000 0.00 0.00 43.93 3.02
1642 6607 0.110688 CGCACACGACAATGTTCTGG 60.111 55.000 0.00 0.00 43.93 3.86
1643 6608 1.225855 GCACACGACAATGTTCTGGA 58.774 50.000 0.00 0.00 0.00 3.86
1644 6609 1.601903 GCACACGACAATGTTCTGGAA 59.398 47.619 0.00 0.00 0.00 3.53
1645 6610 2.349817 GCACACGACAATGTTCTGGAAG 60.350 50.000 0.00 0.00 0.00 3.46
1646 6611 3.130633 CACACGACAATGTTCTGGAAGA 58.869 45.455 0.00 0.00 44.68 2.87
1647 6612 3.748048 CACACGACAATGTTCTGGAAGAT 59.252 43.478 0.00 0.00 46.36 2.40
1648 6613 4.214119 CACACGACAATGTTCTGGAAGATT 59.786 41.667 0.00 0.74 46.36 2.40
1649 6614 4.452455 ACACGACAATGTTCTGGAAGATTC 59.548 41.667 3.26 0.00 46.36 2.52
1650 6615 4.003648 ACGACAATGTTCTGGAAGATTCC 58.996 43.478 4.58 4.58 46.36 3.01
1651 6616 3.375299 CGACAATGTTCTGGAAGATTCCC 59.625 47.826 9.10 0.00 46.36 3.97
1652 6617 4.335416 GACAATGTTCTGGAAGATTCCCA 58.665 43.478 9.10 0.44 46.36 4.37
1653 6618 4.338879 ACAATGTTCTGGAAGATTCCCAG 58.661 43.478 9.10 0.00 46.36 4.45
1659 6624 3.762674 GGAAGATTCCCAGACGACC 57.237 57.895 0.00 0.00 41.62 4.79
1660 6625 0.179108 GGAAGATTCCCAGACGACCG 60.179 60.000 0.00 0.00 41.62 4.79
1661 6626 0.179108 GAAGATTCCCAGACGACCGG 60.179 60.000 0.00 0.00 0.00 5.28
1662 6627 1.614241 AAGATTCCCAGACGACCGGG 61.614 60.000 6.32 0.00 44.60 5.73
1663 6628 2.284405 ATTCCCAGACGACCGGGT 60.284 61.111 6.32 0.00 43.57 5.28
1664 6629 2.573609 GATTCCCAGACGACCGGGTG 62.574 65.000 3.30 0.00 43.57 4.61
1665 6630 3.813606 TTCCCAGACGACCGGGTGA 62.814 63.158 3.30 0.00 43.57 4.02
1666 6631 3.075005 CCCAGACGACCGGGTGAT 61.075 66.667 3.30 0.00 37.70 3.06
1667 6632 2.494918 CCAGACGACCGGGTGATC 59.505 66.667 3.30 1.19 0.00 2.92
1668 6633 2.102357 CAGACGACCGGGTGATCG 59.898 66.667 3.30 8.75 43.97 3.69
1669 6634 2.045634 AGACGACCGGGTGATCGA 60.046 61.111 17.93 0.00 40.86 3.59
1670 6635 1.453379 AGACGACCGGGTGATCGAT 60.453 57.895 17.93 0.00 40.86 3.59
1671 6636 1.299165 GACGACCGGGTGATCGATG 60.299 63.158 17.93 0.00 40.86 3.84
1672 6637 2.027605 CGACCGGGTGATCGATGG 59.972 66.667 3.30 0.00 40.86 3.51
1673 6638 2.280186 GACCGGGTGATCGATGGC 60.280 66.667 3.30 0.00 0.00 4.40
1674 6639 2.764128 ACCGGGTGATCGATGGCT 60.764 61.111 6.32 0.00 0.00 4.75
1675 6640 2.280389 CCGGGTGATCGATGGCTG 60.280 66.667 0.54 0.00 0.00 4.85
1676 6641 2.969238 CGGGTGATCGATGGCTGC 60.969 66.667 0.54 0.00 0.00 5.25
1677 6642 2.190313 GGGTGATCGATGGCTGCA 59.810 61.111 0.54 0.00 0.00 4.41
1678 6643 2.182842 GGGTGATCGATGGCTGCAC 61.183 63.158 0.54 3.93 0.00 4.57
1679 6644 2.182842 GGTGATCGATGGCTGCACC 61.183 63.158 15.14 15.14 41.77 5.01
1680 6645 2.182842 GTGATCGATGGCTGCACCC 61.183 63.158 0.54 0.00 37.83 4.61
1681 6646 2.592861 GATCGATGGCTGCACCCC 60.593 66.667 0.54 0.00 37.83 4.95
1682 6647 3.405093 GATCGATGGCTGCACCCCA 62.405 63.158 0.54 3.95 37.83 4.96
1683 6648 3.411114 ATCGATGGCTGCACCCCAG 62.411 63.158 0.00 0.00 44.67 4.45
1690 6655 4.335647 CTGCACCCCAGGCGAACT 62.336 66.667 0.00 0.00 37.93 3.01
1691 6656 4.329545 TGCACCCCAGGCGAACTC 62.330 66.667 0.00 0.00 0.00 3.01
1692 6657 4.329545 GCACCCCAGGCGAACTCA 62.330 66.667 0.00 0.00 0.00 3.41
1693 6658 2.429930 CACCCCAGGCGAACTCAA 59.570 61.111 0.00 0.00 0.00 3.02
1694 6659 1.966451 CACCCCAGGCGAACTCAAC 60.966 63.158 0.00 0.00 0.00 3.18
1695 6660 2.147387 ACCCCAGGCGAACTCAACT 61.147 57.895 0.00 0.00 0.00 3.16
1696 6661 1.672356 CCCCAGGCGAACTCAACTG 60.672 63.158 0.00 0.00 0.00 3.16
1697 6662 1.371183 CCCAGGCGAACTCAACTGA 59.629 57.895 0.00 0.00 32.86 3.41
1698 6663 0.036010 CCCAGGCGAACTCAACTGAT 60.036 55.000 0.00 0.00 32.86 2.90
1699 6664 1.363744 CCAGGCGAACTCAACTGATC 58.636 55.000 0.00 0.00 32.86 2.92
1700 6665 0.994995 CAGGCGAACTCAACTGATCG 59.005 55.000 0.00 0.00 38.28 3.69
1701 6666 0.888619 AGGCGAACTCAACTGATCGA 59.111 50.000 6.85 0.00 37.48 3.59
1702 6667 1.478510 AGGCGAACTCAACTGATCGAT 59.521 47.619 0.00 0.00 37.48 3.59
1703 6668 1.590238 GGCGAACTCAACTGATCGATG 59.410 52.381 0.54 0.00 37.48 3.84
1704 6669 1.590238 GCGAACTCAACTGATCGATGG 59.410 52.381 0.54 0.00 37.48 3.51
1705 6670 1.590238 CGAACTCAACTGATCGATGGC 59.410 52.381 0.54 0.00 37.48 4.40
1706 6671 2.736719 CGAACTCAACTGATCGATGGCT 60.737 50.000 0.54 0.00 37.48 4.75
1707 6672 2.306341 ACTCAACTGATCGATGGCTG 57.694 50.000 0.54 0.00 0.00 4.85
1708 6673 0.935898 CTCAACTGATCGATGGCTGC 59.064 55.000 0.54 0.00 0.00 5.25
1709 6674 0.538584 TCAACTGATCGATGGCTGCT 59.461 50.000 0.54 0.00 0.00 4.24
1710 6675 1.756538 TCAACTGATCGATGGCTGCTA 59.243 47.619 0.54 0.00 0.00 3.49
1711 6676 2.366590 TCAACTGATCGATGGCTGCTAT 59.633 45.455 0.54 0.00 0.00 2.97
1712 6677 3.573967 TCAACTGATCGATGGCTGCTATA 59.426 43.478 0.54 0.00 0.00 1.31
1713 6678 3.865011 ACTGATCGATGGCTGCTATAG 57.135 47.619 0.54 0.00 0.00 1.31
1724 6689 2.871182 CTGCTATAGCTTGTCGTCCA 57.129 50.000 24.61 1.01 42.66 4.02
1725 6690 2.464865 CTGCTATAGCTTGTCGTCCAC 58.535 52.381 24.61 0.00 42.66 4.02
1726 6691 1.822371 TGCTATAGCTTGTCGTCCACA 59.178 47.619 24.61 0.00 42.66 4.17
1727 6692 2.159240 TGCTATAGCTTGTCGTCCACAG 60.159 50.000 24.61 0.00 42.66 3.66
1728 6693 2.099263 GCTATAGCTTGTCGTCCACAGA 59.901 50.000 17.75 0.00 35.97 3.41
1729 6694 3.243569 GCTATAGCTTGTCGTCCACAGAT 60.244 47.826 17.75 0.00 35.97 2.90
1730 6695 2.941453 TAGCTTGTCGTCCACAGATC 57.059 50.000 0.00 0.00 35.97 2.75
1731 6696 0.109086 AGCTTGTCGTCCACAGATCG 60.109 55.000 0.00 0.00 35.97 3.69
1732 6697 1.078759 GCTTGTCGTCCACAGATCGG 61.079 60.000 0.00 0.00 35.97 4.18
1733 6698 0.458543 CTTGTCGTCCACAGATCGGG 60.459 60.000 0.00 0.00 35.97 5.14
1734 6699 2.202756 GTCGTCCACAGATCGGGC 60.203 66.667 0.00 0.00 0.00 6.13
1735 6700 2.678580 TCGTCCACAGATCGGGCA 60.679 61.111 0.00 0.00 0.00 5.36
1736 6701 2.058001 TCGTCCACAGATCGGGCAT 61.058 57.895 0.00 0.00 0.00 4.40
1737 6702 0.753848 TCGTCCACAGATCGGGCATA 60.754 55.000 0.00 0.00 0.00 3.14
1738 6703 0.104120 CGTCCACAGATCGGGCATAA 59.896 55.000 0.00 0.00 0.00 1.90
1739 6704 1.270305 CGTCCACAGATCGGGCATAAT 60.270 52.381 0.00 0.00 0.00 1.28
1740 6705 2.417719 GTCCACAGATCGGGCATAATC 58.582 52.381 0.00 0.00 0.00 1.75
1741 6706 1.347707 TCCACAGATCGGGCATAATCC 59.652 52.381 0.00 0.00 0.00 3.01
1742 6707 1.072173 CCACAGATCGGGCATAATCCA 59.928 52.381 0.00 0.00 0.00 3.41
1743 6708 2.290514 CCACAGATCGGGCATAATCCAT 60.291 50.000 0.00 0.00 0.00 3.41
1744 6709 3.005554 CACAGATCGGGCATAATCCATC 58.994 50.000 0.00 0.00 0.00 3.51
1745 6710 2.274437 CAGATCGGGCATAATCCATCG 58.726 52.381 0.00 0.00 0.00 3.84
1746 6711 1.902508 AGATCGGGCATAATCCATCGT 59.097 47.619 0.00 0.00 0.00 3.73
1747 6712 2.002586 GATCGGGCATAATCCATCGTG 58.997 52.381 0.00 0.00 0.00 4.35
1748 6713 0.756294 TCGGGCATAATCCATCGTGT 59.244 50.000 0.00 0.00 0.00 4.49
1749 6714 0.867746 CGGGCATAATCCATCGTGTG 59.132 55.000 0.00 0.00 0.00 3.82
1750 6715 1.810031 CGGGCATAATCCATCGTGTGT 60.810 52.381 0.00 0.00 0.00 3.72
1751 6716 1.603802 GGGCATAATCCATCGTGTGTG 59.396 52.381 0.00 0.00 0.00 3.82
1752 6717 2.288666 GGCATAATCCATCGTGTGTGT 58.711 47.619 0.00 0.00 0.00 3.72
1753 6718 3.462982 GGCATAATCCATCGTGTGTGTA 58.537 45.455 0.00 0.00 0.00 2.90
1754 6719 3.494626 GGCATAATCCATCGTGTGTGTAG 59.505 47.826 0.00 0.00 0.00 2.74
1755 6720 3.059597 GCATAATCCATCGTGTGTGTAGC 60.060 47.826 0.00 0.00 0.00 3.58
1756 6721 2.760634 AATCCATCGTGTGTGTAGCA 57.239 45.000 0.00 0.00 0.00 3.49
1757 6722 2.299993 ATCCATCGTGTGTGTAGCAG 57.700 50.000 0.00 0.00 0.00 4.24
1758 6723 0.966179 TCCATCGTGTGTGTAGCAGT 59.034 50.000 0.00 0.00 0.00 4.40
1759 6724 1.067846 TCCATCGTGTGTGTAGCAGTC 60.068 52.381 0.00 0.00 0.00 3.51
1760 6725 1.350193 CATCGTGTGTGTAGCAGTCC 58.650 55.000 0.00 0.00 0.00 3.85
1761 6726 1.067565 CATCGTGTGTGTAGCAGTCCT 60.068 52.381 0.00 0.00 0.00 3.85
1762 6727 0.596577 TCGTGTGTGTAGCAGTCCTC 59.403 55.000 0.00 0.00 0.00 3.71
1763 6728 0.598562 CGTGTGTGTAGCAGTCCTCT 59.401 55.000 0.00 0.00 0.00 3.69
1764 6729 1.000163 CGTGTGTGTAGCAGTCCTCTT 60.000 52.381 0.00 0.00 0.00 2.85
1765 6730 2.408050 GTGTGTGTAGCAGTCCTCTTG 58.592 52.381 0.00 0.00 0.00 3.02
1766 6731 2.035961 GTGTGTGTAGCAGTCCTCTTGA 59.964 50.000 0.00 0.00 0.00 3.02
1767 6732 2.899900 TGTGTGTAGCAGTCCTCTTGAT 59.100 45.455 0.00 0.00 0.00 2.57
1768 6733 3.324846 TGTGTGTAGCAGTCCTCTTGATT 59.675 43.478 0.00 0.00 0.00 2.57
1769 6734 4.526650 TGTGTGTAGCAGTCCTCTTGATTA 59.473 41.667 0.00 0.00 0.00 1.75
1770 6735 5.187772 TGTGTGTAGCAGTCCTCTTGATTAT 59.812 40.000 0.00 0.00 0.00 1.28
1806 6771 1.442520 CCACATGCAGTTTTCGGCG 60.443 57.895 0.00 0.00 43.61 6.46
1818 6783 2.627863 TTTCGGCGAAAATGACATGG 57.372 45.000 30.62 0.00 0.00 3.66
1845 6812 2.104111 CCATCCGTACTCCCATGCTTTA 59.896 50.000 0.00 0.00 0.00 1.85
1846 6813 3.244561 CCATCCGTACTCCCATGCTTTAT 60.245 47.826 0.00 0.00 0.00 1.40
1847 6814 4.389374 CATCCGTACTCCCATGCTTTATT 58.611 43.478 0.00 0.00 0.00 1.40
1848 6815 4.497291 TCCGTACTCCCATGCTTTATTT 57.503 40.909 0.00 0.00 0.00 1.40
1849 6816 4.850680 TCCGTACTCCCATGCTTTATTTT 58.149 39.130 0.00 0.00 0.00 1.82
1850 6817 5.991861 TCCGTACTCCCATGCTTTATTTTA 58.008 37.500 0.00 0.00 0.00 1.52
1851 6818 5.818857 TCCGTACTCCCATGCTTTATTTTAC 59.181 40.000 0.00 0.00 0.00 2.01
1852 6819 5.008316 CCGTACTCCCATGCTTTATTTTACC 59.992 44.000 0.00 0.00 0.00 2.85
1853 6820 5.008316 CGTACTCCCATGCTTTATTTTACCC 59.992 44.000 0.00 0.00 0.00 3.69
1854 6821 4.941713 ACTCCCATGCTTTATTTTACCCA 58.058 39.130 0.00 0.00 0.00 4.51
1855 6822 5.337788 ACTCCCATGCTTTATTTTACCCAA 58.662 37.500 0.00 0.00 0.00 4.12
1856 6823 5.782845 ACTCCCATGCTTTATTTTACCCAAA 59.217 36.000 0.00 0.00 0.00 3.28
1857 6824 6.443527 ACTCCCATGCTTTATTTTACCCAAAT 59.556 34.615 0.00 0.00 38.69 2.32
1858 6825 6.648192 TCCCATGCTTTATTTTACCCAAATG 58.352 36.000 0.00 0.00 35.71 2.32
1859 6826 6.441924 TCCCATGCTTTATTTTACCCAAATGA 59.558 34.615 0.00 0.00 35.71 2.57
1860 6827 7.127032 TCCCATGCTTTATTTTACCCAAATGAT 59.873 33.333 0.00 0.00 35.71 2.45
1861 6828 8.428063 CCCATGCTTTATTTTACCCAAATGATA 58.572 33.333 0.00 0.00 35.71 2.15
1862 6829 9.829507 CCATGCTTTATTTTACCCAAATGATAA 57.170 29.630 0.00 0.00 35.71 1.75
1865 6832 9.868277 TGCTTTATTTTACCCAAATGATAAGTG 57.132 29.630 0.00 0.00 35.71 3.16
1866 6833 8.817100 GCTTTATTTTACCCAAATGATAAGTGC 58.183 33.333 0.00 0.00 35.71 4.40
1870 6837 8.588290 ATTTTACCCAAATGATAAGTGCTACA 57.412 30.769 0.00 0.00 33.47 2.74
1871 6838 8.410673 TTTTACCCAAATGATAAGTGCTACAA 57.589 30.769 0.00 0.00 0.00 2.41
1872 6839 8.410673 TTTACCCAAATGATAAGTGCTACAAA 57.589 30.769 0.00 0.00 0.00 2.83
1873 6840 8.588290 TTACCCAAATGATAAGTGCTACAAAT 57.412 30.769 0.00 0.00 0.00 2.32
1874 6841 6.866480 ACCCAAATGATAAGTGCTACAAATG 58.134 36.000 0.00 0.00 0.00 2.32
1875 6842 6.437162 ACCCAAATGATAAGTGCTACAAATGT 59.563 34.615 0.00 0.00 0.00 2.71
1876 6843 6.753279 CCCAAATGATAAGTGCTACAAATGTG 59.247 38.462 0.00 0.00 0.00 3.21
1877 6844 7.362834 CCCAAATGATAAGTGCTACAAATGTGA 60.363 37.037 0.00 0.00 0.00 3.58
1878 6845 7.485913 CCAAATGATAAGTGCTACAAATGTGAC 59.514 37.037 0.00 0.00 0.00 3.67
1879 6846 7.686438 AATGATAAGTGCTACAAATGTGACA 57.314 32.000 0.00 0.00 0.00 3.58
1880 6847 6.480524 TGATAAGTGCTACAAATGTGACAC 57.519 37.500 0.00 0.00 36.23 3.67
1881 6848 3.878086 AAGTGCTACAAATGTGACACG 57.122 42.857 0.22 0.00 38.99 4.49
1882 6849 3.106242 AGTGCTACAAATGTGACACGA 57.894 42.857 0.22 0.00 38.99 4.35
1883 6850 3.462982 AGTGCTACAAATGTGACACGAA 58.537 40.909 0.22 0.00 38.99 3.85
1884 6851 3.494626 AGTGCTACAAATGTGACACGAAG 59.505 43.478 0.22 0.00 38.99 3.79
1886 6853 4.446385 GTGCTACAAATGTGACACGAAGTA 59.554 41.667 0.22 1.16 41.61 2.24
1887 6854 5.050634 GTGCTACAAATGTGACACGAAGTAA 60.051 40.000 0.22 0.00 41.61 2.24
1888 6855 5.050634 TGCTACAAATGTGACACGAAGTAAC 60.051 40.000 0.22 0.00 41.61 2.50
1889 6856 5.050634 GCTACAAATGTGACACGAAGTAACA 60.051 40.000 0.22 5.62 41.61 2.41
1890 6857 5.151632 ACAAATGTGACACGAAGTAACAC 57.848 39.130 0.22 0.00 41.61 3.32
1891 6858 4.034742 ACAAATGTGACACGAAGTAACACC 59.965 41.667 0.22 0.00 41.61 4.16
1892 6859 1.842720 TGTGACACGAAGTAACACCG 58.157 50.000 0.22 0.00 41.61 4.94
1893 6860 1.134753 TGTGACACGAAGTAACACCGT 59.865 47.619 0.22 0.00 41.61 4.83
1894 6861 1.783140 GTGACACGAAGTAACACCGTC 59.217 52.381 0.00 0.00 41.61 4.79
1895 6862 1.269206 TGACACGAAGTAACACCGTCC 60.269 52.381 0.00 0.00 41.61 4.79
1896 6863 1.000938 GACACGAAGTAACACCGTCCT 60.001 52.381 0.00 0.00 41.61 3.85
1897 6864 2.226437 GACACGAAGTAACACCGTCCTA 59.774 50.000 0.00 0.00 41.61 2.94
1898 6865 2.622942 ACACGAAGTAACACCGTCCTAA 59.377 45.455 0.00 0.00 41.61 2.69
1899 6866 2.982470 CACGAAGTAACACCGTCCTAAC 59.018 50.000 0.00 0.00 41.61 2.34
1900 6867 2.350772 ACGAAGTAACACCGTCCTAACG 60.351 50.000 0.00 0.00 44.87 3.18
1901 6868 4.850932 ACGAAGTAACACCGTCCTAACGT 61.851 47.826 0.00 0.00 44.06 3.99
1902 6869 6.277972 ACGAAGTAACACCGTCCTAACGTT 62.278 45.833 5.88 5.88 44.06 3.99
1903 6870 7.671620 ACGAAGTAACACCGTCCTAACGTTT 62.672 44.000 5.91 0.00 44.06 3.60
1914 6881 6.991485 CGTCCTAACGTTTTCTACAACTAA 57.009 37.500 5.91 0.00 43.94 2.24
1915 6882 7.393551 CGTCCTAACGTTTTCTACAACTAAA 57.606 36.000 5.91 0.00 43.94 1.85
1916 6883 7.496584 CGTCCTAACGTTTTCTACAACTAAAG 58.503 38.462 5.91 0.00 43.94 1.85
1917 6884 7.168135 CGTCCTAACGTTTTCTACAACTAAAGT 59.832 37.037 5.91 0.00 43.94 2.66
1918 6885 8.820933 GTCCTAACGTTTTCTACAACTAAAGTT 58.179 33.333 5.91 0.00 39.12 2.66
1931 6898 5.585820 AACTAAAGTTGGCTTTCGGAAAA 57.414 34.783 4.53 0.00 43.28 2.29
1932 6899 5.585820 ACTAAAGTTGGCTTTCGGAAAAA 57.414 34.783 4.53 0.00 43.28 1.94
1983 6950 3.820777 GTCATCCAGACAGAAAGTTGC 57.179 47.619 0.00 0.00 46.77 4.17
1984 6951 2.485814 GTCATCCAGACAGAAAGTTGCC 59.514 50.000 0.00 0.00 46.77 4.52
1985 6952 2.106338 TCATCCAGACAGAAAGTTGCCA 59.894 45.455 0.00 0.00 0.00 4.92
1986 6953 2.957402 TCCAGACAGAAAGTTGCCAT 57.043 45.000 0.00 0.00 0.00 4.40
1987 6954 2.507484 TCCAGACAGAAAGTTGCCATG 58.493 47.619 0.00 0.00 0.00 3.66
1988 6955 1.068055 CCAGACAGAAAGTTGCCATGC 60.068 52.381 0.00 0.00 0.00 4.06
1989 6956 1.884579 CAGACAGAAAGTTGCCATGCT 59.115 47.619 0.00 0.00 0.00 3.79
1990 6957 2.295349 CAGACAGAAAGTTGCCATGCTT 59.705 45.455 0.00 0.00 0.00 3.91
1991 6958 2.555757 AGACAGAAAGTTGCCATGCTTC 59.444 45.455 0.00 0.00 0.00 3.86
1992 6959 2.294233 GACAGAAAGTTGCCATGCTTCA 59.706 45.455 0.00 0.00 0.00 3.02
1993 6960 2.035066 ACAGAAAGTTGCCATGCTTCAC 59.965 45.455 0.00 0.00 0.00 3.18
1994 6961 2.034939 CAGAAAGTTGCCATGCTTCACA 59.965 45.455 0.00 0.00 0.00 3.58
1995 6962 2.694628 AGAAAGTTGCCATGCTTCACAA 59.305 40.909 0.00 0.00 0.00 3.33
1996 6963 2.514205 AAGTTGCCATGCTTCACAAC 57.486 45.000 0.00 0.00 42.08 3.32
1997 6964 1.696063 AGTTGCCATGCTTCACAACT 58.304 45.000 9.70 9.70 45.86 3.16
1999 6966 3.641437 GTTGCCATGCTTCACAACTAA 57.359 42.857 0.00 0.00 39.39 2.24
2000 6967 3.976169 GTTGCCATGCTTCACAACTAAA 58.024 40.909 0.00 0.00 39.39 1.85
2001 6968 3.921119 TGCCATGCTTCACAACTAAAG 57.079 42.857 0.00 0.00 0.00 1.85
2002 6969 3.221771 TGCCATGCTTCACAACTAAAGT 58.778 40.909 0.00 0.00 0.00 2.66
2003 6970 3.636300 TGCCATGCTTCACAACTAAAGTT 59.364 39.130 0.00 0.00 39.12 2.66
2014 6981 2.403252 ACTAAAGTTGCCATCCTCGG 57.597 50.000 0.00 0.00 0.00 4.63
2015 6982 1.906574 ACTAAAGTTGCCATCCTCGGA 59.093 47.619 0.00 0.00 0.00 4.55
2016 6983 2.505819 ACTAAAGTTGCCATCCTCGGAT 59.494 45.455 0.00 0.00 34.81 4.18
2017 6984 3.709653 ACTAAAGTTGCCATCCTCGGATA 59.290 43.478 0.00 0.00 32.93 2.59
2018 6985 3.644966 AAAGTTGCCATCCTCGGATAA 57.355 42.857 0.00 0.00 32.93 1.75
2019 6986 2.622064 AGTTGCCATCCTCGGATAAC 57.378 50.000 0.00 0.56 32.93 1.89
2020 6987 2.119495 AGTTGCCATCCTCGGATAACT 58.881 47.619 6.73 6.73 33.03 2.24
2021 6988 3.305720 AGTTGCCATCCTCGGATAACTA 58.694 45.455 9.69 0.00 34.90 2.24
2022 6989 3.709653 AGTTGCCATCCTCGGATAACTAA 59.290 43.478 9.69 0.00 34.90 2.24
2023 6990 4.163458 AGTTGCCATCCTCGGATAACTAAA 59.837 41.667 9.69 0.00 34.90 1.85
2024 6991 4.067972 TGCCATCCTCGGATAACTAAAC 57.932 45.455 0.00 0.00 32.93 2.01
2025 6992 3.709653 TGCCATCCTCGGATAACTAAACT 59.290 43.478 0.00 0.00 32.93 2.66
2026 6993 4.163458 TGCCATCCTCGGATAACTAAACTT 59.837 41.667 0.00 0.00 32.93 2.66
2027 6994 4.511826 GCCATCCTCGGATAACTAAACTTG 59.488 45.833 0.00 0.00 32.93 3.16
2028 6995 4.511826 CCATCCTCGGATAACTAAACTTGC 59.488 45.833 0.00 0.00 32.93 4.01
2029 6996 4.811969 TCCTCGGATAACTAAACTTGCA 57.188 40.909 0.00 0.00 0.00 4.08
2030 6997 5.353394 TCCTCGGATAACTAAACTTGCAT 57.647 39.130 0.00 0.00 0.00 3.96
2031 6998 6.474140 TCCTCGGATAACTAAACTTGCATA 57.526 37.500 0.00 0.00 0.00 3.14
2032 6999 6.880484 TCCTCGGATAACTAAACTTGCATAA 58.120 36.000 0.00 0.00 0.00 1.90
2033 7000 7.332557 TCCTCGGATAACTAAACTTGCATAAA 58.667 34.615 0.00 0.00 0.00 1.40
2034 7001 7.825270 TCCTCGGATAACTAAACTTGCATAAAA 59.175 33.333 0.00 0.00 0.00 1.52
2035 7002 8.455682 CCTCGGATAACTAAACTTGCATAAAAA 58.544 33.333 0.00 0.00 0.00 1.94
2052 7019 2.438868 AAAAGCCAAGACGGAATTGC 57.561 45.000 0.00 0.00 36.56 3.56
2053 7020 1.620822 AAAGCCAAGACGGAATTGCT 58.379 45.000 0.00 0.00 36.56 3.91
2054 7021 1.620822 AAGCCAAGACGGAATTGCTT 58.379 45.000 0.00 0.00 36.56 3.91
2055 7022 1.168714 AGCCAAGACGGAATTGCTTC 58.831 50.000 0.00 0.00 36.56 3.86
2056 7023 0.881118 GCCAAGACGGAATTGCTTCA 59.119 50.000 6.24 0.00 36.56 3.02
2057 7024 1.474077 GCCAAGACGGAATTGCTTCAT 59.526 47.619 6.24 0.00 36.56 2.57
2058 7025 2.733227 GCCAAGACGGAATTGCTTCATG 60.733 50.000 6.24 4.19 36.56 3.07
2059 7026 2.523015 CAAGACGGAATTGCTTCATGC 58.477 47.619 6.24 0.00 43.25 4.06
2060 7027 1.098050 AGACGGAATTGCTTCATGCC 58.902 50.000 6.24 0.00 42.00 4.40
2061 7028 0.810648 GACGGAATTGCTTCATGCCA 59.189 50.000 0.00 0.00 42.00 4.92
2062 7029 0.527565 ACGGAATTGCTTCATGCCAC 59.472 50.000 0.00 0.00 42.00 5.01
2063 7030 0.527113 CGGAATTGCTTCATGCCACA 59.473 50.000 0.00 0.00 42.00 4.17
2064 7031 1.733389 CGGAATTGCTTCATGCCACAC 60.733 52.381 0.00 0.00 42.00 3.82
2065 7032 1.621107 GAATTGCTTCATGCCACACG 58.379 50.000 0.00 0.00 42.00 4.49
2066 7033 0.961019 AATTGCTTCATGCCACACGT 59.039 45.000 0.00 0.00 42.00 4.49
2067 7034 0.241749 ATTGCTTCATGCCACACGTG 59.758 50.000 15.48 15.48 42.00 4.49
2068 7035 1.100463 TTGCTTCATGCCACACGTGT 61.100 50.000 17.22 17.22 42.00 4.49
2069 7036 1.081906 GCTTCATGCCACACGTGTG 60.082 57.895 36.13 36.13 45.23 3.82
2079 7046 1.507562 CACACGTGTGGCACTTATCA 58.492 50.000 35.65 0.00 42.10 2.15
2080 7047 1.460743 CACACGTGTGGCACTTATCAG 59.539 52.381 35.65 10.09 42.10 2.90
2081 7048 1.078709 CACGTGTGGCACTTATCAGG 58.921 55.000 19.83 6.20 31.34 3.86
2082 7049 0.036388 ACGTGTGGCACTTATCAGGG 60.036 55.000 19.83 1.75 31.34 4.45
2083 7050 0.036388 CGTGTGGCACTTATCAGGGT 60.036 55.000 19.83 0.00 31.34 4.34
2084 7051 1.739067 GTGTGGCACTTATCAGGGTC 58.261 55.000 19.83 0.00 0.00 4.46
2085 7052 0.618458 TGTGGCACTTATCAGGGTCC 59.382 55.000 19.83 0.00 0.00 4.46
2086 7053 0.912486 GTGGCACTTATCAGGGTCCT 59.088 55.000 11.13 0.00 0.00 3.85
2087 7054 1.282157 GTGGCACTTATCAGGGTCCTT 59.718 52.381 11.13 0.00 0.00 3.36
2176 7144 9.689976 TTGAATATTTGTTTTTCGTGTGATGAT 57.310 25.926 0.00 0.00 0.00 2.45
2222 7190 9.710979 TCTTGAATACGTTTTGACAAGTTTTAG 57.289 29.630 15.03 0.00 36.91 1.85
2266 7234 2.086054 AGAACTTGACACGATGAGGC 57.914 50.000 0.00 0.00 0.00 4.70
2267 7235 1.079503 GAACTTGACACGATGAGGCC 58.920 55.000 0.00 0.00 0.00 5.19
2272 7240 3.055094 ACTTGACACGATGAGGCCTAAAT 60.055 43.478 4.42 1.66 0.00 1.40
2273 7241 2.905075 TGACACGATGAGGCCTAAATG 58.095 47.619 4.42 0.86 0.00 2.32
2298 7267 9.880157 TGACCATGTTTTAAATAGTACTACCTC 57.120 33.333 4.31 0.00 0.00 3.85
2300 7269 9.886132 ACCATGTTTTAAATAGTACTACCTCTG 57.114 33.333 4.31 0.00 0.00 3.35
2301 7270 9.886132 CCATGTTTTAAATAGTACTACCTCTGT 57.114 33.333 4.31 0.00 0.00 3.41
2339 7308 8.879342 GAGCATTTAGATCACTAAGCTCTAAA 57.121 34.615 17.04 6.48 44.42 1.85
2340 7309 8.655651 AGCATTTAGATCACTAAGCTCTAAAC 57.344 34.615 6.22 0.00 43.68 2.01
2341 7310 7.713073 AGCATTTAGATCACTAAGCTCTAAACC 59.287 37.037 6.22 2.54 43.68 3.27
2342 7311 7.041712 GCATTTAGATCACTAAGCTCTAAACCC 60.042 40.741 6.22 0.00 43.68 4.11
2343 7312 7.735326 TTTAGATCACTAAGCTCTAAACCCT 57.265 36.000 0.00 0.00 39.02 4.34
2344 7313 8.834004 TTTAGATCACTAAGCTCTAAACCCTA 57.166 34.615 0.00 0.00 39.02 3.53
2345 7314 6.969993 AGATCACTAAGCTCTAAACCCTAG 57.030 41.667 0.00 0.00 0.00 3.02
2346 7315 6.674573 AGATCACTAAGCTCTAAACCCTAGA 58.325 40.000 0.00 0.00 0.00 2.43
2347 7316 6.548251 AGATCACTAAGCTCTAAACCCTAGAC 59.452 42.308 0.00 0.00 0.00 2.59
2348 7317 4.954826 TCACTAAGCTCTAAACCCTAGACC 59.045 45.833 0.00 0.00 0.00 3.85
2349 7318 4.710375 CACTAAGCTCTAAACCCTAGACCA 59.290 45.833 0.00 0.00 0.00 4.02
2350 7319 5.364157 CACTAAGCTCTAAACCCTAGACCAT 59.636 44.000 0.00 0.00 0.00 3.55
2351 7320 6.550108 CACTAAGCTCTAAACCCTAGACCATA 59.450 42.308 0.00 0.00 0.00 2.74
2352 7321 7.069578 CACTAAGCTCTAAACCCTAGACCATAA 59.930 40.741 0.00 0.00 0.00 1.90
2353 7322 6.886178 AAGCTCTAAACCCTAGACCATAAA 57.114 37.500 0.00 0.00 0.00 1.40
2354 7323 6.236558 AGCTCTAAACCCTAGACCATAAAC 57.763 41.667 0.00 0.00 0.00 2.01
2355 7324 5.130643 AGCTCTAAACCCTAGACCATAAACC 59.869 44.000 0.00 0.00 0.00 3.27
2356 7325 5.104652 GCTCTAAACCCTAGACCATAAACCA 60.105 44.000 0.00 0.00 0.00 3.67
2357 7326 6.409349 GCTCTAAACCCTAGACCATAAACCAT 60.409 42.308 0.00 0.00 0.00 3.55
2358 7327 7.202066 GCTCTAAACCCTAGACCATAAACCATA 60.202 40.741 0.00 0.00 0.00 2.74
2359 7328 8.626917 TCTAAACCCTAGACCATAAACCATAA 57.373 34.615 0.00 0.00 0.00 1.90
2360 7329 8.488668 TCTAAACCCTAGACCATAAACCATAAC 58.511 37.037 0.00 0.00 0.00 1.89
2361 7330 6.645884 AACCCTAGACCATAAACCATAACA 57.354 37.500 0.00 0.00 0.00 2.41
2362 7331 6.645884 ACCCTAGACCATAAACCATAACAA 57.354 37.500 0.00 0.00 0.00 2.83
2363 7332 6.420638 ACCCTAGACCATAAACCATAACAAC 58.579 40.000 0.00 0.00 0.00 3.32
2364 7333 6.012333 ACCCTAGACCATAAACCATAACAACA 60.012 38.462 0.00 0.00 0.00 3.33
2365 7334 6.887545 CCCTAGACCATAAACCATAACAACAA 59.112 38.462 0.00 0.00 0.00 2.83
2366 7335 7.394923 CCCTAGACCATAAACCATAACAACAAA 59.605 37.037 0.00 0.00 0.00 2.83
2367 7336 8.966868 CCTAGACCATAAACCATAACAACAAAT 58.033 33.333 0.00 0.00 0.00 2.32
2368 7337 9.787532 CTAGACCATAAACCATAACAACAAATG 57.212 33.333 0.00 0.00 0.00 2.32
2369 7338 8.415950 AGACCATAAACCATAACAACAAATGA 57.584 30.769 0.00 0.00 0.00 2.57
2370 7339 8.865090 AGACCATAAACCATAACAACAAATGAA 58.135 29.630 0.00 0.00 0.00 2.57
2371 7340 9.482627 GACCATAAACCATAACAACAAATGAAA 57.517 29.630 0.00 0.00 0.00 2.69
2372 7341 9.267084 ACCATAAACCATAACAACAAATGAAAC 57.733 29.630 0.00 0.00 0.00 2.78
2373 7342 9.487790 CCATAAACCATAACAACAAATGAAACT 57.512 29.630 0.00 0.00 0.00 2.66
2376 7345 7.784633 AACCATAACAACAAATGAAACTTGG 57.215 32.000 0.00 0.00 0.00 3.61
2377 7346 6.883744 ACCATAACAACAAATGAAACTTGGT 58.116 32.000 0.00 0.00 0.00 3.67
2378 7347 8.012957 ACCATAACAACAAATGAAACTTGGTA 57.987 30.769 0.00 0.00 0.00 3.25
2379 7348 8.478877 ACCATAACAACAAATGAAACTTGGTAA 58.521 29.630 0.00 0.00 0.00 2.85
2380 7349 9.319143 CCATAACAACAAATGAAACTTGGTAAA 57.681 29.630 0.00 0.00 0.00 2.01
2384 7353 8.840833 ACAACAAATGAAACTTGGTAAAAACT 57.159 26.923 0.00 0.00 0.00 2.66
2385 7354 9.278978 ACAACAAATGAAACTTGGTAAAAACTT 57.721 25.926 0.00 0.00 0.00 2.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
44 2514 0.536724 TGCAGCATGGACTATGTCGT 59.463 50.000 0.00 0.00 39.08 4.34
100 2570 3.896133 CATGGACCATGCTGCGGC 61.896 66.667 21.35 11.65 35.02 6.53
163 4755 1.202348 CTGGATGTGTCTCGTGTAGCA 59.798 52.381 0.00 0.00 0.00 3.49
199 4791 3.057456 AGCTGCTCTTTTGCAAAGATCAG 60.057 43.478 23.48 23.48 42.83 2.90
200 4792 2.889045 AGCTGCTCTTTTGCAAAGATCA 59.111 40.909 12.41 12.02 42.83 2.92
201 4793 3.057736 TCAGCTGCTCTTTTGCAAAGATC 60.058 43.478 12.41 8.39 42.83 2.75
202 4794 2.889045 TCAGCTGCTCTTTTGCAAAGAT 59.111 40.909 12.41 0.00 42.83 2.40
203 4795 2.033801 GTCAGCTGCTCTTTTGCAAAGA 59.966 45.455 12.41 10.86 42.83 2.52
204 4796 2.391879 GTCAGCTGCTCTTTTGCAAAG 58.608 47.619 12.41 7.09 42.83 2.77
205 4797 1.067516 GGTCAGCTGCTCTTTTGCAAA 59.932 47.619 9.47 8.05 42.83 3.68
245 4844 7.518161 TCTGATTAAATTAGTCGCACACAAAG 58.482 34.615 0.00 0.00 0.00 2.77
303 4902 7.613551 ACGGAGGGAGTAGTATTTTATCATT 57.386 36.000 0.00 0.00 0.00 2.57
318 4917 7.048512 AGACAAATATTTAGAAACGGAGGGAG 58.951 38.462 0.00 0.00 0.00 4.30
319 4918 6.954232 AGACAAATATTTAGAAACGGAGGGA 58.046 36.000 0.00 0.00 0.00 4.20
320 4919 7.625828 AAGACAAATATTTAGAAACGGAGGG 57.374 36.000 0.00 0.00 0.00 4.30
321 4920 8.947115 AGAAAGACAAATATTTAGAAACGGAGG 58.053 33.333 0.00 0.00 0.00 4.30
341 4940 9.436957 GTAGTCCATTTGAAATGTCTAGAAAGA 57.563 33.333 15.93 1.84 0.00 2.52
342 4941 8.669243 GGTAGTCCATTTGAAATGTCTAGAAAG 58.331 37.037 15.93 0.00 0.00 2.62
343 4942 8.160765 TGGTAGTCCATTTGAAATGTCTAGAAA 58.839 33.333 15.93 0.00 39.03 2.52
344 4943 7.606456 GTGGTAGTCCATTTGAAATGTCTAGAA 59.394 37.037 15.93 7.22 46.20 2.10
345 4944 7.103641 GTGGTAGTCCATTTGAAATGTCTAGA 58.896 38.462 15.93 4.16 46.20 2.43
346 4945 6.878923 TGTGGTAGTCCATTTGAAATGTCTAG 59.121 38.462 15.93 1.90 46.20 2.43
347 4946 6.774673 TGTGGTAGTCCATTTGAAATGTCTA 58.225 36.000 15.93 13.97 46.20 2.59
348 4947 5.630121 TGTGGTAGTCCATTTGAAATGTCT 58.370 37.500 15.93 14.81 46.20 3.41
349 4948 5.957842 TGTGGTAGTCCATTTGAAATGTC 57.042 39.130 15.93 9.10 46.20 3.06
350 4949 9.342308 CTATATGTGGTAGTCCATTTGAAATGT 57.658 33.333 15.93 1.43 46.20 2.71
351 4950 9.559732 TCTATATGTGGTAGTCCATTTGAAATG 57.440 33.333 10.84 10.84 46.20 2.32
353 4952 9.559732 CATCTATATGTGGTAGTCCATTTGAAA 57.440 33.333 0.00 0.00 46.20 2.69
354 4953 8.713971 ACATCTATATGTGGTAGTCCATTTGAA 58.286 33.333 0.00 0.00 44.79 2.69
355 4954 8.262601 ACATCTATATGTGGTAGTCCATTTGA 57.737 34.615 0.00 0.00 44.79 2.69
358 4957 9.326489 ACATACATCTATATGTGGTAGTCCATT 57.674 33.333 4.09 0.00 45.99 3.16
359 4958 8.901472 ACATACATCTATATGTGGTAGTCCAT 57.099 34.615 4.09 0.00 45.99 3.41
360 4959 9.462606 CTACATACATCTATATGTGGTAGTCCA 57.537 37.037 17.54 0.00 45.99 4.02
361 4960 9.682465 TCTACATACATCTATATGTGGTAGTCC 57.318 37.037 21.18 0.00 45.99 3.85
404 5003 7.484035 ACATACGGAGCAAAATAAGAGAATC 57.516 36.000 0.00 0.00 0.00 2.52
405 5004 8.204836 ACTACATACGGAGCAAAATAAGAGAAT 58.795 33.333 0.00 0.00 0.00 2.40
406 5005 7.553334 ACTACATACGGAGCAAAATAAGAGAA 58.447 34.615 0.00 0.00 0.00 2.87
407 5006 7.108841 ACTACATACGGAGCAAAATAAGAGA 57.891 36.000 0.00 0.00 0.00 3.10
408 5007 6.421202 GGACTACATACGGAGCAAAATAAGAG 59.579 42.308 0.00 0.00 0.00 2.85
409 5008 6.097839 AGGACTACATACGGAGCAAAATAAGA 59.902 38.462 0.00 0.00 0.00 2.10
410 5009 6.281405 AGGACTACATACGGAGCAAAATAAG 58.719 40.000 0.00 0.00 0.00 1.73
411 5010 6.229936 AGGACTACATACGGAGCAAAATAA 57.770 37.500 0.00 0.00 0.00 1.40
412 5011 5.864418 AGGACTACATACGGAGCAAAATA 57.136 39.130 0.00 0.00 0.00 1.40
413 5012 4.755266 AGGACTACATACGGAGCAAAAT 57.245 40.909 0.00 0.00 0.00 1.82
414 5013 4.546829 AAGGACTACATACGGAGCAAAA 57.453 40.909 0.00 0.00 0.00 2.44
415 5014 4.250464 CAAAGGACTACATACGGAGCAAA 58.750 43.478 0.00 0.00 0.00 3.68
416 5015 3.259876 ACAAAGGACTACATACGGAGCAA 59.740 43.478 0.00 0.00 0.00 3.91
417 5016 2.829720 ACAAAGGACTACATACGGAGCA 59.170 45.455 0.00 0.00 0.00 4.26
418 5017 3.521947 ACAAAGGACTACATACGGAGC 57.478 47.619 0.00 0.00 0.00 4.70
419 5018 5.068234 TCAACAAAGGACTACATACGGAG 57.932 43.478 0.00 0.00 0.00 4.63
420 5019 5.471556 TTCAACAAAGGACTACATACGGA 57.528 39.130 0.00 0.00 0.00 4.69
421 5020 6.737254 ATTTCAACAAAGGACTACATACGG 57.263 37.500 0.00 0.00 0.00 4.02
449 5048 8.947115 CCTCCGTTTCTAAATATTTGTCTTTCT 58.053 33.333 11.05 0.00 0.00 2.52
450 5049 8.182227 CCCTCCGTTTCTAAATATTTGTCTTTC 58.818 37.037 11.05 0.00 0.00 2.62
451 5050 7.886446 TCCCTCCGTTTCTAAATATTTGTCTTT 59.114 33.333 11.05 0.00 0.00 2.52
452 5051 7.399634 TCCCTCCGTTTCTAAATATTTGTCTT 58.600 34.615 11.05 0.00 0.00 3.01
453 5052 6.954232 TCCCTCCGTTTCTAAATATTTGTCT 58.046 36.000 11.05 0.00 0.00 3.41
454 5053 6.822170 ACTCCCTCCGTTTCTAAATATTTGTC 59.178 38.462 11.05 0.00 0.00 3.18
455 5054 6.718294 ACTCCCTCCGTTTCTAAATATTTGT 58.282 36.000 11.05 0.00 0.00 2.83
456 5055 7.767198 TGTACTCCCTCCGTTTCTAAATATTTG 59.233 37.037 11.05 1.65 0.00 2.32
457 5056 7.767659 GTGTACTCCCTCCGTTTCTAAATATTT 59.232 37.037 5.89 5.89 0.00 1.40
458 5057 7.270779 GTGTACTCCCTCCGTTTCTAAATATT 58.729 38.462 0.00 0.00 0.00 1.28
459 5058 6.183360 GGTGTACTCCCTCCGTTTCTAAATAT 60.183 42.308 2.33 0.00 0.00 1.28
460 5059 5.127682 GGTGTACTCCCTCCGTTTCTAAATA 59.872 44.000 2.33 0.00 0.00 1.40
461 5060 4.081254 GGTGTACTCCCTCCGTTTCTAAAT 60.081 45.833 2.33 0.00 0.00 1.40
462 5061 3.259123 GGTGTACTCCCTCCGTTTCTAAA 59.741 47.826 2.33 0.00 0.00 1.85
463 5062 2.827921 GGTGTACTCCCTCCGTTTCTAA 59.172 50.000 2.33 0.00 0.00 2.10
464 5063 2.450476 GGTGTACTCCCTCCGTTTCTA 58.550 52.381 2.33 0.00 0.00 2.10
465 5064 1.264295 GGTGTACTCCCTCCGTTTCT 58.736 55.000 2.33 0.00 0.00 2.52
466 5065 0.108945 CGGTGTACTCCCTCCGTTTC 60.109 60.000 8.36 0.00 38.45 2.78
467 5066 1.969862 CGGTGTACTCCCTCCGTTT 59.030 57.895 8.36 0.00 38.45 3.60
468 5067 2.643232 GCGGTGTACTCCCTCCGTT 61.643 63.158 8.36 0.00 44.07 4.44
469 5068 3.066814 GCGGTGTACTCCCTCCGT 61.067 66.667 8.36 0.00 44.07 4.69
470 5069 2.754658 AGCGGTGTACTCCCTCCG 60.755 66.667 8.36 8.54 44.86 4.63
471 5070 0.682209 TACAGCGGTGTACTCCCTCC 60.682 60.000 22.78 0.00 38.19 4.30
472 5071 0.739561 CTACAGCGGTGTACTCCCTC 59.260 60.000 22.78 1.15 38.19 4.30
473 5072 0.039326 ACTACAGCGGTGTACTCCCT 59.961 55.000 22.78 0.00 38.19 4.20
474 5073 0.172803 CACTACAGCGGTGTACTCCC 59.827 60.000 22.78 0.44 38.19 4.30
475 5074 0.458025 GCACTACAGCGGTGTACTCC 60.458 60.000 22.78 10.09 38.19 3.85
476 5075 0.242825 TGCACTACAGCGGTGTACTC 59.757 55.000 22.78 14.39 38.19 2.59
477 5076 0.038526 GTGCACTACAGCGGTGTACT 60.039 55.000 22.78 11.83 43.43 2.73
484 5083 1.660607 CCACAATAGTGCACTACAGCG 59.339 52.381 28.28 17.95 44.53 5.18
572 5171 2.416296 CGACCACTAATGTAGCGAACCA 60.416 50.000 0.00 0.00 0.00 3.67
579 5178 7.658261 TGGAGAAATATCGACCACTAATGTAG 58.342 38.462 0.00 0.00 34.02 2.74
676 5276 0.395862 GACATCTCTCCGACTCCCCA 60.396 60.000 0.00 0.00 0.00 4.96
806 5406 5.186021 CACTACTCCTAAAAGCAGAGAAGGA 59.814 44.000 0.00 0.00 35.14 3.36
830 5430 7.661040 ACTTGCCATTGCCAATATAGTATTTC 58.339 34.615 0.00 0.00 36.33 2.17
831 5431 7.255942 GGACTTGCCATTGCCAATATAGTATTT 60.256 37.037 0.00 0.00 36.33 1.40
832 5432 6.209391 GGACTTGCCATTGCCAATATAGTATT 59.791 38.462 0.00 0.00 36.33 1.89
833 5433 5.711976 GGACTTGCCATTGCCAATATAGTAT 59.288 40.000 0.00 0.00 36.33 2.12
834 5434 5.070001 GGACTTGCCATTGCCAATATAGTA 58.930 41.667 0.00 0.00 36.33 1.82
835 5435 3.891366 GGACTTGCCATTGCCAATATAGT 59.109 43.478 0.00 0.00 36.33 2.12
836 5436 3.890756 TGGACTTGCCATTGCCAATATAG 59.109 43.478 0.00 0.00 43.33 1.31
837 5437 3.908476 TGGACTTGCCATTGCCAATATA 58.092 40.909 0.00 0.00 43.33 0.86
916 5538 1.002659 ACCGTGTGCTGGCTTGTAATA 59.997 47.619 0.00 0.00 0.00 0.98
917 5539 0.250727 ACCGTGTGCTGGCTTGTAAT 60.251 50.000 0.00 0.00 0.00 1.89
918 5540 0.464735 AACCGTGTGCTGGCTTGTAA 60.465 50.000 0.00 0.00 0.00 2.41
919 5541 0.882927 GAACCGTGTGCTGGCTTGTA 60.883 55.000 0.00 0.00 0.00 2.41
921 5543 2.639286 GAACCGTGTGCTGGCTTG 59.361 61.111 0.00 0.00 0.00 4.01
1157 5797 2.923426 GATCATCGACTTGCCCGCCA 62.923 60.000 0.00 0.00 0.00 5.69
1160 5800 0.461870 TTGGATCATCGACTTGCCCG 60.462 55.000 0.00 0.00 0.00 6.13
1178 5818 3.283712 AACCCTCCTTCCTCTCTTCTT 57.716 47.619 0.00 0.00 0.00 2.52
1207 5853 3.056588 AGCTGCCTTCTTCTCTTCTTG 57.943 47.619 0.00 0.00 0.00 3.02
1212 5858 0.399454 TGCAAGCTGCCTTCTTCTCT 59.601 50.000 0.00 0.00 44.23 3.10
1313 5959 0.397941 ATGCTACCCCATGACCATCG 59.602 55.000 0.00 0.00 0.00 3.84
1330 5976 6.051074 AGAAAGGAAAGTCCAAAGCAAAATG 58.949 36.000 0.00 0.00 39.61 2.32
1352 6054 2.677914 TCTTGGACAGGACAACAGAGA 58.322 47.619 0.00 0.00 0.00 3.10
1410 6123 9.906660 CACACACAAGCTTTATTTCCTTAATTA 57.093 29.630 0.00 0.00 0.00 1.40
1450 6167 1.282382 GGGCCCAAGTACTCCTTACA 58.718 55.000 19.95 0.00 32.41 2.41
1483 6445 5.189659 AGGCTCGTGATTCATCTACTAAC 57.810 43.478 0.00 0.00 0.00 2.34
1501 6466 2.684881 CGGATTGCATTTCAGTTAGGCT 59.315 45.455 0.00 0.00 0.00 4.58
1532 6497 4.215185 TCTCGCTTGTGCAAATGAATGTTA 59.785 37.500 0.00 0.00 39.64 2.41
1612 6577 2.657848 TGTCGTGTGCGTAGTAATTTCG 59.342 45.455 0.00 0.00 39.49 3.46
1613 6578 4.634349 TTGTCGTGTGCGTAGTAATTTC 57.366 40.909 0.00 0.00 39.49 2.17
1614 6579 4.449743 ACATTGTCGTGTGCGTAGTAATTT 59.550 37.500 0.00 0.00 39.49 1.82
1615 6580 3.991773 ACATTGTCGTGTGCGTAGTAATT 59.008 39.130 0.00 0.00 39.49 1.40
1616 6581 3.581755 ACATTGTCGTGTGCGTAGTAAT 58.418 40.909 0.00 0.00 39.49 1.89
1617 6582 3.015934 ACATTGTCGTGTGCGTAGTAA 57.984 42.857 0.00 0.00 39.49 2.24
1618 6583 2.710220 ACATTGTCGTGTGCGTAGTA 57.290 45.000 0.00 0.00 39.49 1.82
1619 6584 1.790623 GAACATTGTCGTGTGCGTAGT 59.209 47.619 0.00 0.00 39.49 2.73
1620 6585 2.058798 AGAACATTGTCGTGTGCGTAG 58.941 47.619 0.00 0.00 39.49 3.51
1621 6586 1.790043 CAGAACATTGTCGTGTGCGTA 59.210 47.619 0.00 0.00 39.49 4.42
1622 6587 0.581529 CAGAACATTGTCGTGTGCGT 59.418 50.000 0.00 0.00 39.49 5.24
1623 6588 0.110688 CCAGAACATTGTCGTGTGCG 60.111 55.000 0.00 0.00 32.63 5.34
1624 6589 1.225855 TCCAGAACATTGTCGTGTGC 58.774 50.000 0.00 0.00 31.49 4.57
1625 6590 3.130633 TCTTCCAGAACATTGTCGTGTG 58.869 45.455 0.00 0.00 31.49 3.82
1626 6591 3.469008 TCTTCCAGAACATTGTCGTGT 57.531 42.857 0.00 0.00 0.00 4.49
1627 6592 4.142816 GGAATCTTCCAGAACATTGTCGTG 60.143 45.833 4.05 0.00 46.76 4.35
1628 6593 4.003648 GGAATCTTCCAGAACATTGTCGT 58.996 43.478 4.05 0.00 46.76 4.34
1629 6594 4.606457 GGAATCTTCCAGAACATTGTCG 57.394 45.455 4.05 0.00 46.76 4.35
1641 6606 0.179108 CGGTCGTCTGGGAATCTTCC 60.179 60.000 0.00 0.00 46.82 3.46
1642 6607 0.179108 CCGGTCGTCTGGGAATCTTC 60.179 60.000 0.00 0.00 36.50 2.87
1643 6608 1.898154 CCGGTCGTCTGGGAATCTT 59.102 57.895 0.00 0.00 36.50 2.40
1644 6609 3.617368 CCGGTCGTCTGGGAATCT 58.383 61.111 0.00 0.00 36.50 2.40
1650 6615 2.494918 GATCACCCGGTCGTCTGG 59.505 66.667 0.00 0.00 39.70 3.86
1651 6616 1.725557 ATCGATCACCCGGTCGTCTG 61.726 60.000 11.42 0.00 38.85 3.51
1652 6617 1.453379 ATCGATCACCCGGTCGTCT 60.453 57.895 11.42 0.00 38.85 4.18
1653 6618 1.299165 CATCGATCACCCGGTCGTC 60.299 63.158 11.42 0.00 38.85 4.20
1654 6619 2.782222 CCATCGATCACCCGGTCGT 61.782 63.158 11.42 0.00 38.85 4.34
1655 6620 2.027605 CCATCGATCACCCGGTCG 59.972 66.667 5.87 5.87 39.11 4.79
1656 6621 2.280186 GCCATCGATCACCCGGTC 60.280 66.667 0.00 0.00 0.00 4.79
1657 6622 2.764128 AGCCATCGATCACCCGGT 60.764 61.111 0.00 0.00 0.00 5.28
1658 6623 2.280389 CAGCCATCGATCACCCGG 60.280 66.667 0.00 0.00 0.00 5.73
1659 6624 2.969238 GCAGCCATCGATCACCCG 60.969 66.667 0.00 0.00 0.00 5.28
1660 6625 2.182842 GTGCAGCCATCGATCACCC 61.183 63.158 0.00 0.00 0.00 4.61
1661 6626 2.182842 GGTGCAGCCATCGATCACC 61.183 63.158 15.14 15.14 40.13 4.02
1662 6627 2.182842 GGGTGCAGCCATCGATCAC 61.183 63.158 29.70 0.00 39.65 3.06
1663 6628 2.190313 GGGTGCAGCCATCGATCA 59.810 61.111 29.70 0.00 39.65 2.92
1664 6629 2.592861 GGGGTGCAGCCATCGATC 60.593 66.667 34.28 13.76 39.65 3.69
1665 6630 3.410628 TGGGGTGCAGCCATCGAT 61.411 61.111 34.28 0.00 39.65 3.59
1666 6631 4.100084 CTGGGGTGCAGCCATCGA 62.100 66.667 34.28 14.98 39.65 3.59
1673 6638 4.335647 AGTTCGCCTGGGGTGCAG 62.336 66.667 10.81 0.00 32.51 4.41
1674 6639 4.329545 GAGTTCGCCTGGGGTGCA 62.330 66.667 10.81 0.00 32.51 4.57
1675 6640 3.842925 TTGAGTTCGCCTGGGGTGC 62.843 63.158 10.81 5.10 32.51 5.01
1676 6641 1.966451 GTTGAGTTCGCCTGGGGTG 60.966 63.158 10.81 0.00 33.99 4.61
1677 6642 2.147387 AGTTGAGTTCGCCTGGGGT 61.147 57.895 10.81 0.00 0.00 4.95
1678 6643 1.672356 CAGTTGAGTTCGCCTGGGG 60.672 63.158 4.03 4.03 0.00 4.96
1679 6644 0.036010 ATCAGTTGAGTTCGCCTGGG 60.036 55.000 0.00 0.00 0.00 4.45
1680 6645 1.363744 GATCAGTTGAGTTCGCCTGG 58.636 55.000 0.00 0.00 0.00 4.45
1681 6646 0.994995 CGATCAGTTGAGTTCGCCTG 59.005 55.000 0.00 0.00 0.00 4.85
1682 6647 0.888619 TCGATCAGTTGAGTTCGCCT 59.111 50.000 0.00 0.00 0.00 5.52
1683 6648 1.590238 CATCGATCAGTTGAGTTCGCC 59.410 52.381 0.00 0.00 0.00 5.54
1684 6649 1.590238 CCATCGATCAGTTGAGTTCGC 59.410 52.381 0.00 0.00 0.00 4.70
1685 6650 1.590238 GCCATCGATCAGTTGAGTTCG 59.410 52.381 0.00 0.02 0.00 3.95
1686 6651 2.606725 CAGCCATCGATCAGTTGAGTTC 59.393 50.000 0.00 0.00 0.00 3.01
1687 6652 2.625737 CAGCCATCGATCAGTTGAGTT 58.374 47.619 0.00 0.00 0.00 3.01
1688 6653 1.741732 GCAGCCATCGATCAGTTGAGT 60.742 52.381 11.58 0.00 0.00 3.41
1689 6654 0.935898 GCAGCCATCGATCAGTTGAG 59.064 55.000 11.58 0.00 0.00 3.02
1690 6655 0.538584 AGCAGCCATCGATCAGTTGA 59.461 50.000 11.58 0.00 0.00 3.18
1691 6656 2.229675 TAGCAGCCATCGATCAGTTG 57.770 50.000 0.00 0.00 0.00 3.16
1692 6657 3.616076 GCTATAGCAGCCATCGATCAGTT 60.616 47.826 20.01 0.00 45.23 3.16
1693 6658 2.094286 GCTATAGCAGCCATCGATCAGT 60.094 50.000 20.01 0.00 45.23 3.41
1694 6659 2.538437 GCTATAGCAGCCATCGATCAG 58.462 52.381 20.01 0.00 45.23 2.90
1695 6660 2.662006 GCTATAGCAGCCATCGATCA 57.338 50.000 20.01 0.00 45.23 2.92
1705 6670 2.159240 TGTGGACGACAAGCTATAGCAG 60.159 50.000 26.07 19.35 45.16 4.24
1706 6671 1.822371 TGTGGACGACAAGCTATAGCA 59.178 47.619 26.07 0.00 45.16 3.49
1707 6672 2.099263 TCTGTGGACGACAAGCTATAGC 59.901 50.000 17.33 17.33 42.49 2.97
1708 6673 4.541779 GATCTGTGGACGACAAGCTATAG 58.458 47.826 0.00 0.00 32.80 1.31
1709 6674 3.003378 CGATCTGTGGACGACAAGCTATA 59.997 47.826 0.00 0.00 32.80 1.31
1710 6675 2.223595 CGATCTGTGGACGACAAGCTAT 60.224 50.000 0.00 0.00 32.80 2.97
1711 6676 1.132453 CGATCTGTGGACGACAAGCTA 59.868 52.381 0.00 0.00 32.80 3.32
1712 6677 0.109086 CGATCTGTGGACGACAAGCT 60.109 55.000 0.00 0.00 32.80 3.74
1713 6678 1.078759 CCGATCTGTGGACGACAAGC 61.079 60.000 0.00 0.00 32.80 4.01
1714 6679 0.458543 CCCGATCTGTGGACGACAAG 60.459 60.000 0.00 0.00 32.80 3.16
1715 6680 1.589630 CCCGATCTGTGGACGACAA 59.410 57.895 0.00 0.00 32.80 3.18
1716 6681 3.001902 GCCCGATCTGTGGACGACA 62.002 63.158 0.00 0.00 0.00 4.35
1717 6682 2.202756 GCCCGATCTGTGGACGAC 60.203 66.667 0.00 0.00 0.00 4.34
1718 6683 0.753848 TATGCCCGATCTGTGGACGA 60.754 55.000 0.00 0.00 0.00 4.20
1719 6684 0.104120 TTATGCCCGATCTGTGGACG 59.896 55.000 0.00 0.00 0.00 4.79
1720 6685 2.417719 GATTATGCCCGATCTGTGGAC 58.582 52.381 0.00 0.00 0.00 4.02
1721 6686 1.347707 GGATTATGCCCGATCTGTGGA 59.652 52.381 0.00 0.00 0.00 4.02
1722 6687 1.072173 TGGATTATGCCCGATCTGTGG 59.928 52.381 0.00 0.00 0.00 4.17
1723 6688 2.549064 TGGATTATGCCCGATCTGTG 57.451 50.000 0.00 0.00 0.00 3.66
1724 6689 2.354103 CGATGGATTATGCCCGATCTGT 60.354 50.000 0.00 0.00 0.00 3.41
1725 6690 2.274437 CGATGGATTATGCCCGATCTG 58.726 52.381 0.00 0.00 0.00 2.90
1726 6691 1.902508 ACGATGGATTATGCCCGATCT 59.097 47.619 0.00 0.00 0.00 2.75
1727 6692 2.002586 CACGATGGATTATGCCCGATC 58.997 52.381 0.00 0.00 0.00 3.69
1728 6693 1.347707 ACACGATGGATTATGCCCGAT 59.652 47.619 0.00 0.00 0.00 4.18
1729 6694 0.756294 ACACGATGGATTATGCCCGA 59.244 50.000 0.00 0.00 0.00 5.14
1730 6695 0.867746 CACACGATGGATTATGCCCG 59.132 55.000 0.00 0.00 0.00 6.13
1731 6696 1.603802 CACACACGATGGATTATGCCC 59.396 52.381 0.00 0.00 0.00 5.36
1732 6697 2.288666 ACACACACGATGGATTATGCC 58.711 47.619 0.00 0.00 0.00 4.40
1733 6698 3.059597 GCTACACACACGATGGATTATGC 60.060 47.826 0.00 0.00 0.00 3.14
1734 6699 4.119136 TGCTACACACACGATGGATTATG 58.881 43.478 0.00 0.00 0.00 1.90
1735 6700 4.141937 ACTGCTACACACACGATGGATTAT 60.142 41.667 0.00 0.00 0.00 1.28
1736 6701 3.194755 ACTGCTACACACACGATGGATTA 59.805 43.478 0.00 0.00 0.00 1.75
1737 6702 2.028112 ACTGCTACACACACGATGGATT 60.028 45.455 0.00 0.00 0.00 3.01
1738 6703 1.550524 ACTGCTACACACACGATGGAT 59.449 47.619 0.00 0.00 0.00 3.41
1739 6704 0.966179 ACTGCTACACACACGATGGA 59.034 50.000 0.00 0.00 0.00 3.41
1740 6705 1.350193 GACTGCTACACACACGATGG 58.650 55.000 0.00 0.00 0.00 3.51
1741 6706 1.067565 AGGACTGCTACACACACGATG 60.068 52.381 0.00 0.00 0.00 3.84
1742 6707 1.202582 GAGGACTGCTACACACACGAT 59.797 52.381 0.00 0.00 0.00 3.73
1743 6708 0.596577 GAGGACTGCTACACACACGA 59.403 55.000 0.00 0.00 0.00 4.35
1744 6709 0.598562 AGAGGACTGCTACACACACG 59.401 55.000 0.00 0.00 0.00 4.49
1745 6710 2.035961 TCAAGAGGACTGCTACACACAC 59.964 50.000 0.00 0.00 0.00 3.82
1746 6711 2.316108 TCAAGAGGACTGCTACACACA 58.684 47.619 0.00 0.00 0.00 3.72
1747 6712 3.601443 ATCAAGAGGACTGCTACACAC 57.399 47.619 0.00 0.00 0.00 3.82
1748 6713 5.939764 ATAATCAAGAGGACTGCTACACA 57.060 39.130 0.00 0.00 0.00 3.72
1749 6714 8.894768 AATAATAATCAAGAGGACTGCTACAC 57.105 34.615 0.00 0.00 0.00 2.90
1750 6715 9.905713 AAAATAATAATCAAGAGGACTGCTACA 57.094 29.630 0.00 0.00 0.00 2.74
1753 6718 8.689972 CCAAAAATAATAATCAAGAGGACTGCT 58.310 33.333 0.00 0.00 0.00 4.24
1754 6719 7.922811 CCCAAAAATAATAATCAAGAGGACTGC 59.077 37.037 0.00 0.00 0.00 4.40
1755 6720 8.971073 ACCCAAAAATAATAATCAAGAGGACTG 58.029 33.333 0.00 0.00 0.00 3.51
1756 6721 8.971073 CACCCAAAAATAATAATCAAGAGGACT 58.029 33.333 0.00 0.00 0.00 3.85
1757 6722 8.197439 CCACCCAAAAATAATAATCAAGAGGAC 58.803 37.037 0.00 0.00 0.00 3.85
1758 6723 7.344352 CCCACCCAAAAATAATAATCAAGAGGA 59.656 37.037 0.00 0.00 0.00 3.71
1759 6724 7.125659 ACCCACCCAAAAATAATAATCAAGAGG 59.874 37.037 0.00 0.00 0.00 3.69
1760 6725 8.078060 ACCCACCCAAAAATAATAATCAAGAG 57.922 34.615 0.00 0.00 0.00 2.85
1761 6726 7.898636 AGACCCACCCAAAAATAATAATCAAGA 59.101 33.333 0.00 0.00 0.00 3.02
1762 6727 8.078060 AGACCCACCCAAAAATAATAATCAAG 57.922 34.615 0.00 0.00 0.00 3.02
1763 6728 7.125053 GGAGACCCACCCAAAAATAATAATCAA 59.875 37.037 0.00 0.00 0.00 2.57
1764 6729 6.609616 GGAGACCCACCCAAAAATAATAATCA 59.390 38.462 0.00 0.00 0.00 2.57
1765 6730 6.609616 TGGAGACCCACCCAAAAATAATAATC 59.390 38.462 0.00 0.00 37.58 1.75
1766 6731 6.507568 TGGAGACCCACCCAAAAATAATAAT 58.492 36.000 0.00 0.00 37.58 1.28
1767 6732 5.905088 TGGAGACCCACCCAAAAATAATAA 58.095 37.500 0.00 0.00 37.58 1.40
1768 6733 5.538082 TGGAGACCCACCCAAAAATAATA 57.462 39.130 0.00 0.00 37.58 0.98
1769 6734 4.412060 TGGAGACCCACCCAAAAATAAT 57.588 40.909 0.00 0.00 37.58 1.28
1770 6735 3.905493 TGGAGACCCACCCAAAAATAA 57.095 42.857 0.00 0.00 37.58 1.40
1806 6771 2.524306 TGGGTGGACCATGTCATTTTC 58.476 47.619 0.00 0.00 46.80 2.29
1818 6783 1.683418 GGGAGTACGGATGGGTGGAC 61.683 65.000 0.00 0.00 0.00 4.02
1831 6796 6.080969 TGGGTAAAATAAAGCATGGGAGTA 57.919 37.500 0.00 0.00 0.00 2.59
1832 6797 4.941713 TGGGTAAAATAAAGCATGGGAGT 58.058 39.130 0.00 0.00 0.00 3.85
1845 6812 8.588290 TGTAGCACTTATCATTTGGGTAAAAT 57.412 30.769 0.00 0.00 39.13 1.82
1846 6813 8.410673 TTGTAGCACTTATCATTTGGGTAAAA 57.589 30.769 0.00 0.00 0.00 1.52
1847 6814 8.410673 TTTGTAGCACTTATCATTTGGGTAAA 57.589 30.769 0.00 0.00 0.00 2.01
1848 6815 8.465999 CATTTGTAGCACTTATCATTTGGGTAA 58.534 33.333 0.00 0.00 0.00 2.85
1849 6816 7.613801 ACATTTGTAGCACTTATCATTTGGGTA 59.386 33.333 0.00 0.00 0.00 3.69
1850 6817 6.437162 ACATTTGTAGCACTTATCATTTGGGT 59.563 34.615 0.00 0.00 0.00 4.51
1851 6818 6.753279 CACATTTGTAGCACTTATCATTTGGG 59.247 38.462 0.00 0.00 0.00 4.12
1852 6819 7.485913 GTCACATTTGTAGCACTTATCATTTGG 59.514 37.037 0.00 0.00 0.00 3.28
1853 6820 8.022550 TGTCACATTTGTAGCACTTATCATTTG 58.977 33.333 0.00 0.00 0.00 2.32
1854 6821 8.023128 GTGTCACATTTGTAGCACTTATCATTT 58.977 33.333 0.00 0.00 32.72 2.32
1855 6822 7.530010 GTGTCACATTTGTAGCACTTATCATT 58.470 34.615 0.00 0.00 32.72 2.57
1856 6823 6.183360 CGTGTCACATTTGTAGCACTTATCAT 60.183 38.462 3.42 0.00 33.04 2.45
1857 6824 5.120053 CGTGTCACATTTGTAGCACTTATCA 59.880 40.000 3.42 0.00 33.04 2.15
1858 6825 5.347635 TCGTGTCACATTTGTAGCACTTATC 59.652 40.000 3.42 0.00 33.04 1.75
1859 6826 5.234752 TCGTGTCACATTTGTAGCACTTAT 58.765 37.500 3.42 0.00 33.04 1.73
1860 6827 4.623002 TCGTGTCACATTTGTAGCACTTA 58.377 39.130 3.42 2.36 33.04 2.24
1861 6828 3.462982 TCGTGTCACATTTGTAGCACTT 58.537 40.909 3.42 0.00 33.04 3.16
1862 6829 3.106242 TCGTGTCACATTTGTAGCACT 57.894 42.857 3.42 0.00 33.04 4.40
1863 6830 3.247648 ACTTCGTGTCACATTTGTAGCAC 59.752 43.478 3.42 6.70 0.00 4.40
1864 6831 3.462982 ACTTCGTGTCACATTTGTAGCA 58.537 40.909 3.42 0.00 0.00 3.49
1865 6832 5.050634 TGTTACTTCGTGTCACATTTGTAGC 60.051 40.000 3.42 3.72 28.85 3.58
1866 6833 6.352526 GTGTTACTTCGTGTCACATTTGTAG 58.647 40.000 3.42 0.00 35.55 2.74
1867 6834 5.234757 GGTGTTACTTCGTGTCACATTTGTA 59.765 40.000 3.42 0.00 35.55 2.41
1868 6835 4.034742 GGTGTTACTTCGTGTCACATTTGT 59.965 41.667 3.42 0.00 35.55 2.83
1869 6836 4.523813 GGTGTTACTTCGTGTCACATTTG 58.476 43.478 3.42 0.00 35.55 2.32
1870 6837 3.246699 CGGTGTTACTTCGTGTCACATTT 59.753 43.478 3.42 0.00 35.55 2.32
1871 6838 2.798283 CGGTGTTACTTCGTGTCACATT 59.202 45.455 3.42 0.00 35.55 2.71
1872 6839 2.223876 ACGGTGTTACTTCGTGTCACAT 60.224 45.455 3.42 0.00 35.55 3.21
1873 6840 1.134753 ACGGTGTTACTTCGTGTCACA 59.865 47.619 3.42 0.00 35.70 3.58
1874 6841 1.783140 GACGGTGTTACTTCGTGTCAC 59.217 52.381 8.02 0.00 37.25 3.67
1875 6842 1.269206 GGACGGTGTTACTTCGTGTCA 60.269 52.381 8.02 0.00 37.25 3.58
1876 6843 1.000938 AGGACGGTGTTACTTCGTGTC 60.001 52.381 8.02 2.47 37.25 3.67
1877 6844 1.035139 AGGACGGTGTTACTTCGTGT 58.965 50.000 8.02 0.00 37.25 4.49
1878 6845 2.982470 GTTAGGACGGTGTTACTTCGTG 59.018 50.000 8.02 0.00 37.25 4.35
1879 6846 2.350772 CGTTAGGACGGTGTTACTTCGT 60.351 50.000 3.72 3.72 45.32 3.85
1880 6847 2.245096 CGTTAGGACGGTGTTACTTCG 58.755 52.381 0.00 0.00 45.32 3.79
1892 6859 8.357796 ACTTTAGTTGTAGAAAACGTTAGGAC 57.642 34.615 0.00 0.00 35.13 3.85
1893 6860 8.947055 AACTTTAGTTGTAGAAAACGTTAGGA 57.053 30.769 0.00 0.00 36.80 2.94
1909 6876 5.585820 TTTTCCGAAAGCCAACTTTAGTT 57.414 34.783 0.00 0.00 46.20 2.24
1910 6877 5.585820 TTTTTCCGAAAGCCAACTTTAGT 57.414 34.783 0.00 0.00 46.20 2.24
1961 6928 7.899739 TGGCAACTTTCTGTCTGGATGACAA 62.900 44.000 0.19 0.00 46.56 3.18
1962 6929 6.506772 TGGCAACTTTCTGTCTGGATGACA 62.507 45.833 0.00 0.00 45.73 3.58
1963 6930 2.485814 GGCAACTTTCTGTCTGGATGAC 59.514 50.000 0.00 0.00 45.54 3.06
1964 6931 2.106338 TGGCAACTTTCTGTCTGGATGA 59.894 45.455 0.00 0.00 37.61 2.92
1965 6932 2.507484 TGGCAACTTTCTGTCTGGATG 58.493 47.619 0.00 0.00 37.61 3.51
1966 6933 2.957402 TGGCAACTTTCTGTCTGGAT 57.043 45.000 0.00 0.00 37.61 3.41
1967 6934 2.507484 CATGGCAACTTTCTGTCTGGA 58.493 47.619 0.00 0.00 37.61 3.86
1968 6935 1.068055 GCATGGCAACTTTCTGTCTGG 60.068 52.381 0.00 0.00 37.61 3.86
1969 6936 1.884579 AGCATGGCAACTTTCTGTCTG 59.115 47.619 0.00 0.00 37.61 3.51
1970 6937 2.283145 AGCATGGCAACTTTCTGTCT 57.717 45.000 0.00 0.00 37.61 3.41
1971 6938 2.294233 TGAAGCATGGCAACTTTCTGTC 59.706 45.455 7.47 0.00 37.61 3.51
1972 6939 2.035066 GTGAAGCATGGCAACTTTCTGT 59.965 45.455 7.47 0.00 37.61 3.41
1973 6940 2.034939 TGTGAAGCATGGCAACTTTCTG 59.965 45.455 7.47 0.00 37.61 3.02
1974 6941 2.309613 TGTGAAGCATGGCAACTTTCT 58.690 42.857 7.47 0.00 37.61 2.52
1975 6942 2.796593 GTTGTGAAGCATGGCAACTTTC 59.203 45.455 7.47 4.81 38.41 2.62
1976 6943 2.431782 AGTTGTGAAGCATGGCAACTTT 59.568 40.909 7.47 0.00 46.18 2.66
1977 6944 2.034124 AGTTGTGAAGCATGGCAACTT 58.966 42.857 5.89 5.89 46.18 2.66
1978 6945 1.696063 AGTTGTGAAGCATGGCAACT 58.304 45.000 9.78 9.78 44.36 3.16
1979 6946 3.641437 TTAGTTGTGAAGCATGGCAAC 57.359 42.857 0.00 0.00 40.83 4.17
1980 6947 3.636300 ACTTTAGTTGTGAAGCATGGCAA 59.364 39.130 0.00 0.00 0.00 4.52
1981 6948 3.221771 ACTTTAGTTGTGAAGCATGGCA 58.778 40.909 0.00 0.00 0.00 4.92
1982 6949 3.923017 ACTTTAGTTGTGAAGCATGGC 57.077 42.857 0.00 0.00 0.00 4.40
1992 6959 7.556633 ATCCGAGGATGGCAACTTTAGTTGT 62.557 44.000 20.31 4.58 43.66 3.32
1993 6960 5.163363 ATCCGAGGATGGCAACTTTAGTTG 61.163 45.833 16.36 16.36 44.08 3.16
1994 6961 2.304761 TCCGAGGATGGCAACTTTAGTT 59.695 45.455 0.00 0.00 39.12 2.24
1995 6962 1.906574 TCCGAGGATGGCAACTTTAGT 59.093 47.619 0.00 0.00 37.61 2.24
1996 6963 2.691409 TCCGAGGATGGCAACTTTAG 57.309 50.000 0.00 0.00 37.61 1.85
1997 6964 4.163458 AGTTATCCGAGGATGGCAACTTTA 59.837 41.667 14.50 0.00 36.17 1.85
1998 6965 3.054361 AGTTATCCGAGGATGGCAACTTT 60.054 43.478 14.50 0.00 36.17 2.66
1999 6966 2.505819 AGTTATCCGAGGATGGCAACTT 59.494 45.455 14.50 0.00 36.17 2.66
2000 6967 2.119495 AGTTATCCGAGGATGGCAACT 58.881 47.619 14.50 12.59 36.17 3.16
2001 6968 2.622064 AGTTATCCGAGGATGGCAAC 57.378 50.000 14.50 10.69 36.17 4.17
2002 6969 4.163458 AGTTTAGTTATCCGAGGATGGCAA 59.837 41.667 14.50 0.00 36.17 4.52
2003 6970 3.709653 AGTTTAGTTATCCGAGGATGGCA 59.290 43.478 14.50 0.00 36.17 4.92
2004 6971 4.338379 AGTTTAGTTATCCGAGGATGGC 57.662 45.455 14.50 7.16 36.17 4.40
2005 6972 4.511826 GCAAGTTTAGTTATCCGAGGATGG 59.488 45.833 14.50 0.00 36.17 3.51
2006 6973 5.116180 TGCAAGTTTAGTTATCCGAGGATG 58.884 41.667 14.50 0.00 36.17 3.51
2007 6974 5.353394 TGCAAGTTTAGTTATCCGAGGAT 57.647 39.130 9.80 9.80 38.54 3.24
2008 6975 4.811969 TGCAAGTTTAGTTATCCGAGGA 57.188 40.909 0.00 0.00 0.00 3.71
2009 6976 7.548196 TTTATGCAAGTTTAGTTATCCGAGG 57.452 36.000 0.00 0.00 0.00 4.63
2032 6999 2.365293 AGCAATTCCGTCTTGGCTTTTT 59.635 40.909 0.00 0.00 37.80 1.94
2033 7000 1.963515 AGCAATTCCGTCTTGGCTTTT 59.036 42.857 0.00 0.00 37.80 2.27
2034 7001 1.620822 AGCAATTCCGTCTTGGCTTT 58.379 45.000 0.00 0.00 37.80 3.51
2035 7002 1.541588 GAAGCAATTCCGTCTTGGCTT 59.458 47.619 0.00 0.00 37.80 4.35
2036 7003 1.168714 GAAGCAATTCCGTCTTGGCT 58.831 50.000 0.00 0.00 37.80 4.75
2037 7004 0.881118 TGAAGCAATTCCGTCTTGGC 59.119 50.000 0.00 0.00 37.80 4.52
2038 7005 2.733227 GCATGAAGCAATTCCGTCTTGG 60.733 50.000 0.00 0.00 44.79 3.61
2039 7006 2.523015 GCATGAAGCAATTCCGTCTTG 58.477 47.619 0.00 0.00 44.79 3.02
2040 7007 2.927553 GCATGAAGCAATTCCGTCTT 57.072 45.000 0.00 0.00 44.79 3.01
2051 7018 1.081906 CACACGTGTGGCATGAAGC 60.082 57.895 35.65 0.00 42.10 3.86
2060 7027 1.460743 CTGATAAGTGCCACACGTGTG 59.539 52.381 36.13 36.13 45.23 3.82
2061 7028 1.608025 CCTGATAAGTGCCACACGTGT 60.608 52.381 17.22 17.22 39.64 4.49
2062 7029 1.078709 CCTGATAAGTGCCACACGTG 58.921 55.000 15.48 15.48 39.64 4.49
2063 7030 0.036388 CCCTGATAAGTGCCACACGT 60.036 55.000 0.00 0.00 39.64 4.49
2064 7031 0.036388 ACCCTGATAAGTGCCACACG 60.036 55.000 0.00 0.00 39.64 4.49
2065 7032 1.679032 GGACCCTGATAAGTGCCACAC 60.679 57.143 0.00 0.00 34.10 3.82
2066 7033 0.618458 GGACCCTGATAAGTGCCACA 59.382 55.000 0.00 0.00 0.00 4.17
2067 7034 0.912486 AGGACCCTGATAAGTGCCAC 59.088 55.000 0.00 0.00 0.00 5.01
2068 7035 1.668826 AAGGACCCTGATAAGTGCCA 58.331 50.000 0.00 0.00 0.00 4.92
2069 7036 4.439253 AATAAGGACCCTGATAAGTGCC 57.561 45.455 0.00 0.00 0.00 5.01
2070 7037 7.556635 AGTTAAAATAAGGACCCTGATAAGTGC 59.443 37.037 0.00 0.00 0.00 4.40
2071 7038 9.462606 AAGTTAAAATAAGGACCCTGATAAGTG 57.537 33.333 0.00 0.00 0.00 3.16
2076 7043 8.950007 TTGAAAGTTAAAATAAGGACCCTGAT 57.050 30.769 0.00 0.00 0.00 2.90
2077 7044 8.950007 ATTGAAAGTTAAAATAAGGACCCTGA 57.050 30.769 0.00 0.00 0.00 3.86
2078 7045 9.996554 AAATTGAAAGTTAAAATAAGGACCCTG 57.003 29.630 0.00 0.00 0.00 4.45
2079 7046 9.996554 CAAATTGAAAGTTAAAATAAGGACCCT 57.003 29.630 0.00 0.00 0.00 4.34
2080 7047 9.990360 TCAAATTGAAAGTTAAAATAAGGACCC 57.010 29.630 0.00 0.00 0.00 4.46
2167 7135 6.749118 GTCTTATTTGAAAGCCATCATCACAC 59.251 38.462 0.00 0.00 0.00 3.82
2176 7144 4.985538 AGAGTGGTCTTATTTGAAAGCCA 58.014 39.130 0.00 0.00 33.28 4.75
2232 7200 9.353999 GTGTCAAGTTCTAACAAATGAAACTTT 57.646 29.630 0.00 0.00 30.45 2.66
2242 7210 4.988540 CCTCATCGTGTCAAGTTCTAACAA 59.011 41.667 0.00 0.00 0.00 2.83
2248 7216 1.079503 GGCCTCATCGTGTCAAGTTC 58.920 55.000 0.00 0.00 0.00 3.01
2272 7240 9.880157 GAGGTAGTACTATTTAAAACATGGTCA 57.120 33.333 5.75 0.00 0.00 4.02
2321 7290 7.720515 GTCTAGGGTTTAGAGCTTAGTGATCTA 59.279 40.741 2.25 0.00 42.10 1.98
2322 7291 6.548251 GTCTAGGGTTTAGAGCTTAGTGATCT 59.452 42.308 2.25 0.00 44.47 2.75
2323 7292 6.239092 GGTCTAGGGTTTAGAGCTTAGTGATC 60.239 46.154 6.23 0.00 38.59 2.92
2324 7293 5.599242 GGTCTAGGGTTTAGAGCTTAGTGAT 59.401 44.000 6.23 0.00 38.59 3.06
2325 7294 4.954826 GGTCTAGGGTTTAGAGCTTAGTGA 59.045 45.833 6.23 0.00 38.59 3.41
2326 7295 4.710375 TGGTCTAGGGTTTAGAGCTTAGTG 59.290 45.833 12.79 0.00 41.26 2.74
2327 7296 4.944177 TGGTCTAGGGTTTAGAGCTTAGT 58.056 43.478 12.79 0.00 41.26 2.24
2328 7297 7.598759 TTATGGTCTAGGGTTTAGAGCTTAG 57.401 40.000 12.79 0.00 41.26 2.18
2329 7298 7.147602 GGTTTATGGTCTAGGGTTTAGAGCTTA 60.148 40.741 12.79 8.97 41.26 3.09
2330 7299 6.352823 GGTTTATGGTCTAGGGTTTAGAGCTT 60.353 42.308 12.79 9.74 41.26 3.74
2331 7300 5.130643 GGTTTATGGTCTAGGGTTTAGAGCT 59.869 44.000 12.79 0.00 41.26 4.09
2332 7301 5.104652 TGGTTTATGGTCTAGGGTTTAGAGC 60.105 44.000 6.48 6.48 41.11 4.09
2333 7302 6.555463 TGGTTTATGGTCTAGGGTTTAGAG 57.445 41.667 0.00 0.00 0.00 2.43
2334 7303 8.488668 GTTATGGTTTATGGTCTAGGGTTTAGA 58.511 37.037 0.00 0.00 0.00 2.10
2335 7304 8.269317 TGTTATGGTTTATGGTCTAGGGTTTAG 58.731 37.037 0.00 0.00 0.00 1.85
2336 7305 8.160434 TGTTATGGTTTATGGTCTAGGGTTTA 57.840 34.615 0.00 0.00 0.00 2.01
2337 7306 7.034967 TGTTATGGTTTATGGTCTAGGGTTT 57.965 36.000 0.00 0.00 0.00 3.27
2338 7307 6.645884 TGTTATGGTTTATGGTCTAGGGTT 57.354 37.500 0.00 0.00 0.00 4.11
2339 7308 6.012333 TGTTGTTATGGTTTATGGTCTAGGGT 60.012 38.462 0.00 0.00 0.00 4.34
2340 7309 6.419791 TGTTGTTATGGTTTATGGTCTAGGG 58.580 40.000 0.00 0.00 0.00 3.53
2341 7310 7.931578 TTGTTGTTATGGTTTATGGTCTAGG 57.068 36.000 0.00 0.00 0.00 3.02
2342 7311 9.787532 CATTTGTTGTTATGGTTTATGGTCTAG 57.212 33.333 0.00 0.00 0.00 2.43
2343 7312 9.521841 TCATTTGTTGTTATGGTTTATGGTCTA 57.478 29.630 0.00 0.00 0.00 2.59
2344 7313 8.415950 TCATTTGTTGTTATGGTTTATGGTCT 57.584 30.769 0.00 0.00 0.00 3.85
2345 7314 9.482627 TTTCATTTGTTGTTATGGTTTATGGTC 57.517 29.630 0.00 0.00 0.00 4.02
2346 7315 9.267084 GTTTCATTTGTTGTTATGGTTTATGGT 57.733 29.630 0.00 0.00 0.00 3.55
2347 7316 9.487790 AGTTTCATTTGTTGTTATGGTTTATGG 57.512 29.630 0.00 0.00 0.00 2.74
2350 7319 9.319143 CCAAGTTTCATTTGTTGTTATGGTTTA 57.681 29.630 0.00 0.00 0.00 2.01
2351 7320 7.826744 ACCAAGTTTCATTTGTTGTTATGGTTT 59.173 29.630 0.00 0.00 32.69 3.27
2352 7321 7.334858 ACCAAGTTTCATTTGTTGTTATGGTT 58.665 30.769 0.00 0.00 32.69 3.67
2353 7322 6.883744 ACCAAGTTTCATTTGTTGTTATGGT 58.116 32.000 0.00 0.00 0.00 3.55
2354 7323 8.879342 TTACCAAGTTTCATTTGTTGTTATGG 57.121 30.769 0.00 0.00 0.00 2.74
2358 7327 9.278978 AGTTTTTACCAAGTTTCATTTGTTGTT 57.721 25.926 0.00 0.00 0.00 2.83
2359 7328 8.840833 AGTTTTTACCAAGTTTCATTTGTTGT 57.159 26.923 0.00 0.00 0.00 3.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.