Multiple sequence alignment - TraesCS5D01G066200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G066200 chr5D 100.000 6955 0 0 1 6955 61702948 61695994 0.000000e+00 12844.0
1 TraesCS5D01G066200 chr5D 95.588 136 6 0 6820 6955 379421104 379420969 1.170000e-52 219.0
2 TraesCS5D01G066200 chr5D 94.853 136 7 0 6820 6955 265671467 265671602 5.460000e-51 213.0
3 TraesCS5D01G066200 chr5D 93.617 141 7 2 6816 6955 565885434 565885573 7.070000e-50 209.0
4 TraesCS5D01G066200 chr6A 97.277 5728 127 21 1111 6822 504350836 504345122 0.000000e+00 9686.0
5 TraesCS5D01G066200 chr6A 95.270 444 19 2 737 1178 504351283 504350840 0.000000e+00 702.0
6 TraesCS5D01G066200 chr5B 96.321 5626 159 19 737 6348 703728651 703734242 0.000000e+00 9199.0
7 TraesCS5D01G066200 chr5B 92.712 4734 273 38 738 5430 542076746 542081448 0.000000e+00 6765.0
8 TraesCS5D01G066200 chr5B 92.463 4060 208 42 2793 6819 560512654 560508660 0.000000e+00 5712.0
9 TraesCS5D01G066200 chr5B 93.609 751 28 8 1 737 68925441 68926185 0.000000e+00 1103.0
10 TraesCS5D01G066200 chr5B 96.250 480 17 1 6344 6822 703742289 703742768 0.000000e+00 785.0
11 TraesCS5D01G066200 chr5B 82.397 926 101 34 764 1651 448846836 448847737 0.000000e+00 750.0
12 TraesCS5D01G066200 chr5B 85.714 644 52 21 3175 3807 448849375 448849989 1.640000e-180 643.0
13 TraesCS5D01G066200 chr5B 92.222 360 26 2 1653 2010 448847777 448848136 6.220000e-140 508.0
14 TraesCS5D01G066200 chr3B 97.285 5193 120 16 1640 6822 720191442 720196623 0.000000e+00 8789.0
15 TraesCS5D01G066200 chr3B 95.688 974 41 1 738 1710 720190469 720191442 0.000000e+00 1565.0
16 TraesCS5D01G066200 chr3B 84.481 1089 123 28 5620 6696 23958609 23959663 0.000000e+00 1033.0
17 TraesCS5D01G066200 chr6D 97.312 4055 93 15 1596 5638 4985409 4981359 0.000000e+00 6870.0
18 TraesCS5D01G066200 chr6D 96.972 1090 26 3 5735 6822 4981343 4980259 0.000000e+00 1823.0
19 TraesCS5D01G066200 chr6D 95.443 768 33 2 736 1502 4986176 4985410 0.000000e+00 1223.0
20 TraesCS5D01G066200 chr6D 77.438 687 98 33 2735 3403 450638859 450638212 2.390000e-94 357.0
21 TraesCS5D01G066200 chr6D 94.891 137 7 0 6819 6955 365439674 365439538 1.520000e-51 215.0
22 TraesCS5D01G066200 chr6D 94.853 136 7 0 6820 6955 293097807 293097942 5.460000e-51 213.0
23 TraesCS5D01G066200 chr7B 97.030 3939 94 18 2265 6196 459604186 459600264 0.000000e+00 6604.0
24 TraesCS5D01G066200 chr7B 94.547 1027 55 1 738 1763 459605210 459604184 0.000000e+00 1585.0
25 TraesCS5D01G066200 chr7B 90.554 794 68 6 822 1611 652134266 652133476 0.000000e+00 1044.0
26 TraesCS5D01G066200 chr7B 95.814 645 22 3 6182 6822 459593749 459593106 0.000000e+00 1037.0
27 TraesCS5D01G066200 chr7B 90.393 229 17 4 3805 4033 253594497 253594274 5.270000e-76 296.0
28 TraesCS5D01G066200 chrUn 84.799 1342 134 40 4279 5609 37333480 37334762 0.000000e+00 1284.0
29 TraesCS5D01G066200 chr5A 94.305 755 24 6 1 739 51676145 51675394 0.000000e+00 1138.0
30 TraesCS5D01G066200 chr5A 76.744 645 101 24 2881 3517 30518990 30518387 1.460000e-81 315.0
31 TraesCS5D01G066200 chr3D 83.880 1098 110 30 5620 6696 16516830 16517881 0.000000e+00 985.0
32 TraesCS5D01G066200 chr3D 83.577 956 123 18 4674 5609 534127147 534128088 0.000000e+00 865.0
33 TraesCS5D01G066200 chr3D 84.149 776 96 13 4843 5607 18427785 18428544 0.000000e+00 726.0
34 TraesCS5D01G066200 chr3D 95.683 139 6 0 6817 6955 121322512 121322650 2.520000e-54 224.0
35 TraesCS5D01G066200 chr3D 95.588 136 6 0 6820 6955 307094864 307094999 1.170000e-52 219.0
36 TraesCS5D01G066200 chr3D 85.093 161 21 3 3230 3389 307677492 307677650 2.010000e-35 161.0
37 TraesCS5D01G066200 chr3A 85.274 876 97 19 5620 6476 20020048 20019186 0.000000e+00 874.0
38 TraesCS5D01G066200 chr3A 87.023 786 58 23 4279 5053 26003921 26003169 0.000000e+00 846.0
39 TraesCS5D01G066200 chr3A 94.872 195 9 1 1770 1963 20437938 20437744 3.150000e-78 303.0
40 TraesCS5D01G066200 chr3A 92.935 184 13 0 764 947 20438121 20437938 1.150000e-67 268.0
41 TraesCS5D01G066200 chr3A 87.850 214 22 3 6486 6696 20019154 20018942 1.500000e-61 248.0
42 TraesCS5D01G066200 chr1D 85.988 678 59 16 1900 2550 386154677 386155345 0.000000e+00 693.0
43 TraesCS5D01G066200 chr1B 85.398 678 63 16 1900 2550 518530476 518531144 0.000000e+00 671.0
44 TraesCS5D01G066200 chr1A 86.496 548 40 14 2029 2550 486043071 486043610 7.830000e-159 571.0
45 TraesCS5D01G066200 chr4B 93.103 377 23 3 3805 4179 53322827 53323202 3.670000e-152 549.0
46 TraesCS5D01G066200 chr7A 87.665 227 26 1 26 252 43516195 43515971 5.350000e-66 263.0
47 TraesCS5D01G066200 chr7A 78.309 272 42 12 2915 3182 506586981 506587239 7.220000e-35 159.0
48 TraesCS5D01G066200 chr4D 94.853 136 7 0 6820 6955 21731158 21731023 5.460000e-51 213.0
49 TraesCS5D01G066200 chr2D 94.853 136 7 0 6820 6955 606061440 606061575 5.460000e-51 213.0
50 TraesCS5D01G066200 chr4A 88.281 128 11 2 33 156 652194296 652194169 4.350000e-32 150.0
51 TraesCS5D01G066200 chr6B 87.037 54 2 5 2565 2618 650687206 650687158 1.000000e-03 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G066200 chr5D 61695994 61702948 6954 True 12844.000000 12844 100.000000 1 6955 1 chr5D.!!$R1 6954
1 TraesCS5D01G066200 chr6A 504345122 504351283 6161 True 5194.000000 9686 96.273500 737 6822 2 chr6A.!!$R1 6085
2 TraesCS5D01G066200 chr5B 703728651 703734242 5591 False 9199.000000 9199 96.321000 737 6348 1 chr5B.!!$F3 5611
3 TraesCS5D01G066200 chr5B 542076746 542081448 4702 False 6765.000000 6765 92.712000 738 5430 1 chr5B.!!$F2 4692
4 TraesCS5D01G066200 chr5B 560508660 560512654 3994 True 5712.000000 5712 92.463000 2793 6819 1 chr5B.!!$R1 4026
5 TraesCS5D01G066200 chr5B 68925441 68926185 744 False 1103.000000 1103 93.609000 1 737 1 chr5B.!!$F1 736
6 TraesCS5D01G066200 chr5B 448846836 448849989 3153 False 633.666667 750 86.777667 764 3807 3 chr5B.!!$F5 3043
7 TraesCS5D01G066200 chr3B 720190469 720196623 6154 False 5177.000000 8789 96.486500 738 6822 2 chr3B.!!$F2 6084
8 TraesCS5D01G066200 chr3B 23958609 23959663 1054 False 1033.000000 1033 84.481000 5620 6696 1 chr3B.!!$F1 1076
9 TraesCS5D01G066200 chr6D 4980259 4986176 5917 True 3305.333333 6870 96.575667 736 6822 3 chr6D.!!$R3 6086
10 TraesCS5D01G066200 chr6D 450638212 450638859 647 True 357.000000 357 77.438000 2735 3403 1 chr6D.!!$R2 668
11 TraesCS5D01G066200 chr7B 459600264 459605210 4946 True 4094.500000 6604 95.788500 738 6196 2 chr7B.!!$R4 5458
12 TraesCS5D01G066200 chr7B 652133476 652134266 790 True 1044.000000 1044 90.554000 822 1611 1 chr7B.!!$R3 789
13 TraesCS5D01G066200 chr7B 459593106 459593749 643 True 1037.000000 1037 95.814000 6182 6822 1 chr7B.!!$R2 640
14 TraesCS5D01G066200 chrUn 37333480 37334762 1282 False 1284.000000 1284 84.799000 4279 5609 1 chrUn.!!$F1 1330
15 TraesCS5D01G066200 chr5A 51675394 51676145 751 True 1138.000000 1138 94.305000 1 739 1 chr5A.!!$R2 738
16 TraesCS5D01G066200 chr5A 30518387 30518990 603 True 315.000000 315 76.744000 2881 3517 1 chr5A.!!$R1 636
17 TraesCS5D01G066200 chr3D 16516830 16517881 1051 False 985.000000 985 83.880000 5620 6696 1 chr3D.!!$F1 1076
18 TraesCS5D01G066200 chr3D 534127147 534128088 941 False 865.000000 865 83.577000 4674 5609 1 chr3D.!!$F6 935
19 TraesCS5D01G066200 chr3D 18427785 18428544 759 False 726.000000 726 84.149000 4843 5607 1 chr3D.!!$F2 764
20 TraesCS5D01G066200 chr3A 26003169 26003921 752 True 846.000000 846 87.023000 4279 5053 1 chr3A.!!$R1 774
21 TraesCS5D01G066200 chr3A 20018942 20020048 1106 True 561.000000 874 86.562000 5620 6696 2 chr3A.!!$R2 1076
22 TraesCS5D01G066200 chr1D 386154677 386155345 668 False 693.000000 693 85.988000 1900 2550 1 chr1D.!!$F1 650
23 TraesCS5D01G066200 chr1B 518530476 518531144 668 False 671.000000 671 85.398000 1900 2550 1 chr1B.!!$F1 650
24 TraesCS5D01G066200 chr1A 486043071 486043610 539 False 571.000000 571 86.496000 2029 2550 1 chr1A.!!$F1 521

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
467 473 0.100146 GTATCGTCCCCGTCACACTC 59.900 60.000 0.00 0.0 35.01 3.51 F
523 529 0.110486 GGCAGAGGACCAGAAACCAA 59.890 55.000 0.00 0.0 0.00 3.67 F
539 545 0.249868 CCAAGACGAGCACCTGACAA 60.250 55.000 0.00 0.0 0.00 3.18 F
770 776 0.251073 GCCTTTTAGAGTACCCGCCA 59.749 55.000 0.00 0.0 0.00 5.69 F
3016 4253 1.340017 GGGTGCTGCAGATGGTTTCTA 60.340 52.381 20.43 0.0 31.77 2.10 F
4133 5471 2.813754 GGTTGCATGTGTGATGTACTGT 59.186 45.455 0.00 0.0 0.00 3.55 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2458 3666 1.174078 TGACCTTGTCTACACCGCGA 61.174 55.000 8.23 0.0 33.15 5.87 R
2914 4151 6.374333 GTCAGACAATGGTTTCTAGGCAAATA 59.626 38.462 0.00 0.0 0.00 1.40 R
3016 4253 9.895138 CCAATCCATAGGAAAGAAAAATCAAAT 57.105 29.630 0.00 0.0 34.34 2.32 R
3311 4626 1.959282 GGCATCAATTCAGATCACCCC 59.041 52.381 0.00 0.0 0.00 4.95 R
5549 6939 1.134521 CCATAAGCCACCTAAGTGCGA 60.135 52.381 0.00 0.0 43.09 5.10 R
6076 7478 1.667212 TGCATCTAATGTTGCAGCGAG 59.333 47.619 0.00 0.0 42.05 5.03 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
81 84 9.520515 AATCAGTTGTTCCTAACATTGAATAGT 57.479 29.630 9.89 0.00 41.79 2.12
102 105 4.844349 TCCATTTTAGGAGGACAGAAGG 57.156 45.455 0.00 0.00 32.77 3.46
174 180 5.067805 ACAAATTGAACTGAACCCTCTTCAC 59.932 40.000 0.00 0.00 0.00 3.18
352 358 4.521062 CCGCAGAAGCTCCGGAGG 62.521 72.222 32.06 16.36 44.55 4.30
370 376 3.357079 CACAGCAACCGCCACCTC 61.357 66.667 0.00 0.00 39.83 3.85
371 377 4.643387 ACAGCAACCGCCACCTCC 62.643 66.667 0.00 0.00 39.83 4.30
375 381 4.077184 CAACCGCCACCTCCGCTA 62.077 66.667 0.00 0.00 0.00 4.26
376 382 4.078516 AACCGCCACCTCCGCTAC 62.079 66.667 0.00 0.00 0.00 3.58
378 384 4.208686 CCGCCACCTCCGCTACTC 62.209 72.222 0.00 0.00 0.00 2.59
379 385 4.208686 CGCCACCTCCGCTACTCC 62.209 72.222 0.00 0.00 0.00 3.85
380 386 2.760385 GCCACCTCCGCTACTCCT 60.760 66.667 0.00 0.00 0.00 3.69
381 387 3.082579 GCCACCTCCGCTACTCCTG 62.083 68.421 0.00 0.00 0.00 3.86
382 388 1.379977 CCACCTCCGCTACTCCTGA 60.380 63.158 0.00 0.00 0.00 3.86
383 389 1.388065 CCACCTCCGCTACTCCTGAG 61.388 65.000 0.00 0.00 0.00 3.35
384 390 1.755008 ACCTCCGCTACTCCTGAGC 60.755 63.158 0.00 0.00 36.54 4.26
385 391 2.494530 CCTCCGCTACTCCTGAGCC 61.495 68.421 0.00 0.00 36.53 4.70
386 392 2.442272 TCCGCTACTCCTGAGCCC 60.442 66.667 0.00 0.00 36.53 5.19
387 393 3.541713 CCGCTACTCCTGAGCCCC 61.542 72.222 0.00 0.00 36.53 5.80
388 394 2.759973 CGCTACTCCTGAGCCCCA 60.760 66.667 0.00 0.00 36.53 4.96
389 395 2.359169 CGCTACTCCTGAGCCCCAA 61.359 63.158 0.00 0.00 36.53 4.12
390 396 1.899437 CGCTACTCCTGAGCCCCAAA 61.899 60.000 0.00 0.00 36.53 3.28
391 397 0.328258 GCTACTCCTGAGCCCCAAAA 59.672 55.000 0.00 0.00 33.60 2.44
392 398 1.680249 GCTACTCCTGAGCCCCAAAAG 60.680 57.143 0.00 0.00 33.60 2.27
393 399 0.328258 TACTCCTGAGCCCCAAAAGC 59.672 55.000 0.00 0.00 0.00 3.51
394 400 1.381851 CTCCTGAGCCCCAAAAGCT 59.618 57.895 0.00 0.00 45.23 3.74
398 404 4.645809 GAGCCCCAAAAGCTCGAT 57.354 55.556 0.00 0.00 46.58 3.59
399 405 2.101700 GAGCCCCAAAAGCTCGATG 58.898 57.895 0.00 0.00 46.58 3.84
400 406 0.392998 GAGCCCCAAAAGCTCGATGA 60.393 55.000 0.00 0.00 46.58 2.92
401 407 0.393537 AGCCCCAAAAGCTCGATGAG 60.394 55.000 0.00 0.00 34.91 2.90
402 408 0.678048 GCCCCAAAAGCTCGATGAGT 60.678 55.000 0.00 0.00 31.39 3.41
403 409 1.089920 CCCCAAAAGCTCGATGAGTG 58.910 55.000 0.00 0.00 31.39 3.51
404 410 1.339055 CCCCAAAAGCTCGATGAGTGA 60.339 52.381 0.00 0.00 31.39 3.41
405 411 2.426522 CCCAAAAGCTCGATGAGTGAA 58.573 47.619 0.00 0.00 31.39 3.18
406 412 2.160417 CCCAAAAGCTCGATGAGTGAAC 59.840 50.000 0.00 0.00 31.39 3.18
407 413 3.070018 CCAAAAGCTCGATGAGTGAACT 58.930 45.455 0.00 0.00 31.39 3.01
408 414 3.120408 CCAAAAGCTCGATGAGTGAACTG 60.120 47.826 0.00 0.00 31.39 3.16
409 415 1.719600 AAGCTCGATGAGTGAACTGC 58.280 50.000 0.00 0.00 31.39 4.40
410 416 0.457509 AGCTCGATGAGTGAACTGCG 60.458 55.000 0.00 0.00 31.39 5.18
411 417 1.416813 GCTCGATGAGTGAACTGCGG 61.417 60.000 0.00 0.00 31.39 5.69
412 418 0.171231 CTCGATGAGTGAACTGCGGA 59.829 55.000 0.00 0.00 0.00 5.54
413 419 0.171231 TCGATGAGTGAACTGCGGAG 59.829 55.000 0.85 0.85 0.00 4.63
414 420 0.803768 CGATGAGTGAACTGCGGAGG 60.804 60.000 9.36 0.00 0.00 4.30
415 421 1.078848 ATGAGTGAACTGCGGAGGC 60.079 57.895 9.36 0.00 40.52 4.70
416 422 1.548357 ATGAGTGAACTGCGGAGGCT 61.548 55.000 9.36 0.36 40.82 4.58
417 423 0.898326 TGAGTGAACTGCGGAGGCTA 60.898 55.000 9.36 0.00 40.82 3.93
418 424 0.458716 GAGTGAACTGCGGAGGCTAC 60.459 60.000 9.36 3.76 40.82 3.58
419 425 1.185618 AGTGAACTGCGGAGGCTACA 61.186 55.000 9.36 0.00 40.82 2.74
420 426 1.014564 GTGAACTGCGGAGGCTACAC 61.015 60.000 9.36 8.83 40.82 2.90
421 427 1.292223 GAACTGCGGAGGCTACACA 59.708 57.895 9.36 0.00 40.82 3.72
422 428 1.004918 AACTGCGGAGGCTACACAC 60.005 57.895 9.36 0.00 40.82 3.82
423 429 2.507102 CTGCGGAGGCTACACACG 60.507 66.667 0.00 0.00 40.82 4.49
450 456 4.201679 CCGGTGCGCAGATCGGTA 62.202 66.667 27.93 0.00 37.92 4.02
451 457 2.027605 CGGTGCGCAGATCGGTAT 59.972 61.111 12.22 0.00 38.94 2.73
452 458 2.016704 CGGTGCGCAGATCGGTATC 61.017 63.158 12.22 0.00 38.94 2.24
453 459 2.016704 GGTGCGCAGATCGGTATCG 61.017 63.158 12.22 0.00 37.19 2.92
454 460 1.299165 GTGCGCAGATCGGTATCGT 60.299 57.895 12.22 0.00 37.19 3.73
455 461 1.008881 TGCGCAGATCGGTATCGTC 60.009 57.895 5.66 0.00 37.19 4.20
456 462 1.729838 GCGCAGATCGGTATCGTCC 60.730 63.158 0.30 0.00 37.19 4.79
457 463 1.081376 CGCAGATCGGTATCGTCCC 60.081 63.158 0.00 0.00 37.19 4.46
458 464 1.289380 GCAGATCGGTATCGTCCCC 59.711 63.158 0.00 0.00 37.19 4.81
459 465 1.579932 CAGATCGGTATCGTCCCCG 59.420 63.158 0.00 0.00 45.55 5.73
460 466 1.150081 AGATCGGTATCGTCCCCGT 59.850 57.895 0.00 0.00 44.51 5.28
461 467 0.888285 AGATCGGTATCGTCCCCGTC 60.888 60.000 0.00 6.59 44.51 4.79
462 468 1.152902 ATCGGTATCGTCCCCGTCA 60.153 57.895 0.00 0.00 44.51 4.35
463 469 1.450531 ATCGGTATCGTCCCCGTCAC 61.451 60.000 0.00 0.00 44.51 3.67
464 470 2.409055 CGGTATCGTCCCCGTCACA 61.409 63.158 0.00 0.00 39.38 3.58
465 471 1.140375 GGTATCGTCCCCGTCACAC 59.860 63.158 0.00 0.00 35.01 3.82
466 472 1.318158 GGTATCGTCCCCGTCACACT 61.318 60.000 0.00 0.00 35.01 3.55
467 473 0.100146 GTATCGTCCCCGTCACACTC 59.900 60.000 0.00 0.00 35.01 3.51
468 474 1.033746 TATCGTCCCCGTCACACTCC 61.034 60.000 0.00 0.00 35.01 3.85
469 475 2.783122 ATCGTCCCCGTCACACTCCT 62.783 60.000 0.00 0.00 35.01 3.69
470 476 2.971452 GTCCCCGTCACACTCCTC 59.029 66.667 0.00 0.00 0.00 3.71
471 477 1.906824 GTCCCCGTCACACTCCTCA 60.907 63.158 0.00 0.00 0.00 3.86
472 478 1.906824 TCCCCGTCACACTCCTCAC 60.907 63.158 0.00 0.00 0.00 3.51
473 479 2.657237 CCCGTCACACTCCTCACC 59.343 66.667 0.00 0.00 0.00 4.02
474 480 2.258591 CCGTCACACTCCTCACCG 59.741 66.667 0.00 0.00 0.00 4.94
475 481 2.430921 CGTCACACTCCTCACCGC 60.431 66.667 0.00 0.00 0.00 5.68
476 482 2.048127 GTCACACTCCTCACCGCC 60.048 66.667 0.00 0.00 0.00 6.13
477 483 3.680786 TCACACTCCTCACCGCCG 61.681 66.667 0.00 0.00 0.00 6.46
478 484 3.991051 CACACTCCTCACCGCCGT 61.991 66.667 0.00 0.00 0.00 5.68
479 485 3.681835 ACACTCCTCACCGCCGTC 61.682 66.667 0.00 0.00 0.00 4.79
480 486 3.680786 CACTCCTCACCGCCGTCA 61.681 66.667 0.00 0.00 0.00 4.35
481 487 3.681835 ACTCCTCACCGCCGTCAC 61.682 66.667 0.00 0.00 0.00 3.67
482 488 4.436998 CTCCTCACCGCCGTCACC 62.437 72.222 0.00 0.00 0.00 4.02
485 491 4.308458 CTCACCGCCGTCACCCAA 62.308 66.667 0.00 0.00 0.00 4.12
486 492 4.308458 TCACCGCCGTCACCCAAG 62.308 66.667 0.00 0.00 0.00 3.61
492 498 4.308458 CCGTCACCCAAGGCGTCA 62.308 66.667 0.00 0.00 0.00 4.35
493 499 3.041940 CGTCACCCAAGGCGTCAC 61.042 66.667 0.00 0.00 0.00 3.67
494 500 2.668550 GTCACCCAAGGCGTCACC 60.669 66.667 0.00 0.00 39.61 4.02
495 501 3.948719 TCACCCAAGGCGTCACCC 61.949 66.667 0.00 0.00 40.58 4.61
505 511 3.353836 CGTCACCCCGCAAAGTGG 61.354 66.667 0.00 0.00 34.67 4.00
506 512 3.670377 GTCACCCCGCAAAGTGGC 61.670 66.667 0.00 0.00 34.67 5.01
507 513 4.196778 TCACCCCGCAAAGTGGCA 62.197 61.111 0.00 0.00 34.67 4.92
508 514 3.673484 CACCCCGCAAAGTGGCAG 61.673 66.667 0.00 0.00 0.00 4.85
509 515 3.884774 ACCCCGCAAAGTGGCAGA 61.885 61.111 0.00 0.00 0.00 4.26
510 516 3.058160 CCCCGCAAAGTGGCAGAG 61.058 66.667 0.00 0.00 0.00 3.35
511 517 3.058160 CCCGCAAAGTGGCAGAGG 61.058 66.667 0.00 0.00 0.00 3.69
512 518 2.032528 CCGCAAAGTGGCAGAGGA 59.967 61.111 0.00 0.00 0.00 3.71
513 519 2.328099 CCGCAAAGTGGCAGAGGAC 61.328 63.158 0.00 0.00 0.00 3.85
514 520 2.328099 CGCAAAGTGGCAGAGGACC 61.328 63.158 0.00 0.00 0.00 4.46
515 521 1.228245 GCAAAGTGGCAGAGGACCA 60.228 57.895 0.00 0.00 33.84 4.02
516 522 1.239968 GCAAAGTGGCAGAGGACCAG 61.240 60.000 0.00 0.00 38.04 4.00
517 523 0.397941 CAAAGTGGCAGAGGACCAGA 59.602 55.000 0.00 0.00 38.04 3.86
518 524 1.140312 AAAGTGGCAGAGGACCAGAA 58.860 50.000 0.00 0.00 38.04 3.02
519 525 1.140312 AAGTGGCAGAGGACCAGAAA 58.860 50.000 0.00 0.00 38.04 2.52
520 526 0.398318 AGTGGCAGAGGACCAGAAAC 59.602 55.000 0.00 0.00 38.04 2.78
521 527 0.606673 GTGGCAGAGGACCAGAAACC 60.607 60.000 0.00 0.00 38.04 3.27
522 528 1.059584 TGGCAGAGGACCAGAAACCA 61.060 55.000 0.00 0.00 32.06 3.67
523 529 0.110486 GGCAGAGGACCAGAAACCAA 59.890 55.000 0.00 0.00 0.00 3.67
524 530 1.528129 GCAGAGGACCAGAAACCAAG 58.472 55.000 0.00 0.00 0.00 3.61
525 531 1.072331 GCAGAGGACCAGAAACCAAGA 59.928 52.381 0.00 0.00 0.00 3.02
526 532 2.772287 CAGAGGACCAGAAACCAAGAC 58.228 52.381 0.00 0.00 0.00 3.01
527 533 1.344763 AGAGGACCAGAAACCAAGACG 59.655 52.381 0.00 0.00 0.00 4.18
528 534 1.343465 GAGGACCAGAAACCAAGACGA 59.657 52.381 0.00 0.00 0.00 4.20
529 535 1.344763 AGGACCAGAAACCAAGACGAG 59.655 52.381 0.00 0.00 0.00 4.18
530 536 1.149148 GACCAGAAACCAAGACGAGC 58.851 55.000 0.00 0.00 0.00 5.03
531 537 0.468226 ACCAGAAACCAAGACGAGCA 59.532 50.000 0.00 0.00 0.00 4.26
532 538 0.868406 CCAGAAACCAAGACGAGCAC 59.132 55.000 0.00 0.00 0.00 4.40
533 539 0.868406 CAGAAACCAAGACGAGCACC 59.132 55.000 0.00 0.00 0.00 5.01
534 540 0.759346 AGAAACCAAGACGAGCACCT 59.241 50.000 0.00 0.00 0.00 4.00
535 541 0.868406 GAAACCAAGACGAGCACCTG 59.132 55.000 0.00 0.00 0.00 4.00
536 542 0.468226 AAACCAAGACGAGCACCTGA 59.532 50.000 0.00 0.00 0.00 3.86
537 543 0.249911 AACCAAGACGAGCACCTGAC 60.250 55.000 0.00 0.00 0.00 3.51
538 544 1.367471 CCAAGACGAGCACCTGACA 59.633 57.895 0.00 0.00 0.00 3.58
539 545 0.249868 CCAAGACGAGCACCTGACAA 60.250 55.000 0.00 0.00 0.00 3.18
540 546 0.861837 CAAGACGAGCACCTGACAAC 59.138 55.000 0.00 0.00 0.00 3.32
541 547 0.597637 AAGACGAGCACCTGACAACG 60.598 55.000 0.00 0.00 0.00 4.10
542 548 1.007734 GACGAGCACCTGACAACGA 60.008 57.895 0.00 0.00 0.00 3.85
543 549 1.004277 GACGAGCACCTGACAACGAG 61.004 60.000 0.00 0.00 0.00 4.18
544 550 1.007271 CGAGCACCTGACAACGAGT 60.007 57.895 0.00 0.00 0.00 4.18
553 559 2.522060 GACAACGAGTCCAGCAGTG 58.478 57.895 0.00 0.00 41.56 3.66
554 560 1.560860 GACAACGAGTCCAGCAGTGC 61.561 60.000 7.13 7.13 41.56 4.40
555 561 1.301244 CAACGAGTCCAGCAGTGCT 60.301 57.895 13.14 13.14 40.77 4.40
556 562 0.882042 CAACGAGTCCAGCAGTGCTT 60.882 55.000 16.89 0.00 36.40 3.91
557 563 0.679505 AACGAGTCCAGCAGTGCTTA 59.320 50.000 16.89 3.50 36.40 3.09
558 564 0.898320 ACGAGTCCAGCAGTGCTTAT 59.102 50.000 16.89 0.85 36.40 1.73
559 565 1.276421 ACGAGTCCAGCAGTGCTTATT 59.724 47.619 16.89 3.16 36.40 1.40
560 566 1.929836 CGAGTCCAGCAGTGCTTATTC 59.070 52.381 16.89 11.79 36.40 1.75
561 567 2.284190 GAGTCCAGCAGTGCTTATTCC 58.716 52.381 16.89 1.16 36.40 3.01
562 568 1.630369 AGTCCAGCAGTGCTTATTCCA 59.370 47.619 16.89 0.00 36.40 3.53
563 569 2.240667 AGTCCAGCAGTGCTTATTCCAT 59.759 45.455 16.89 0.00 36.40 3.41
564 570 3.455910 AGTCCAGCAGTGCTTATTCCATA 59.544 43.478 16.89 0.00 36.40 2.74
565 571 3.812053 GTCCAGCAGTGCTTATTCCATAG 59.188 47.826 16.89 0.04 36.40 2.23
566 572 3.455910 TCCAGCAGTGCTTATTCCATAGT 59.544 43.478 16.89 0.00 36.40 2.12
567 573 3.562973 CCAGCAGTGCTTATTCCATAGTG 59.437 47.826 16.89 0.00 36.40 2.74
568 574 4.194640 CAGCAGTGCTTATTCCATAGTGT 58.805 43.478 16.89 0.00 36.40 3.55
569 575 4.034858 CAGCAGTGCTTATTCCATAGTGTG 59.965 45.833 16.89 0.00 36.40 3.82
570 576 4.080919 AGCAGTGCTTATTCCATAGTGTGA 60.081 41.667 13.14 0.00 33.89 3.58
571 577 4.818546 GCAGTGCTTATTCCATAGTGTGAT 59.181 41.667 8.18 0.00 0.00 3.06
572 578 5.049818 GCAGTGCTTATTCCATAGTGTGATC 60.050 44.000 8.18 0.00 0.00 2.92
573 579 5.468072 CAGTGCTTATTCCATAGTGTGATCC 59.532 44.000 0.00 0.00 0.00 3.36
574 580 4.757149 GTGCTTATTCCATAGTGTGATCCC 59.243 45.833 0.00 0.00 0.00 3.85
575 581 4.660303 TGCTTATTCCATAGTGTGATCCCT 59.340 41.667 0.00 0.00 0.00 4.20
576 582 4.999950 GCTTATTCCATAGTGTGATCCCTG 59.000 45.833 0.00 0.00 0.00 4.45
577 583 5.555017 CTTATTCCATAGTGTGATCCCTGG 58.445 45.833 0.00 0.00 0.00 4.45
578 584 1.806496 TCCATAGTGTGATCCCTGGG 58.194 55.000 6.33 6.33 0.00 4.45
579 585 0.767375 CCATAGTGTGATCCCTGGGG 59.233 60.000 14.00 2.42 0.00 4.96
580 586 0.767375 CATAGTGTGATCCCTGGGGG 59.233 60.000 14.00 0.00 46.11 5.40
597 603 1.550524 GGGGGTTTGAGCATCTTTTCC 59.449 52.381 0.00 0.00 34.92 3.13
598 604 1.550524 GGGGTTTGAGCATCTTTTCCC 59.449 52.381 0.00 0.00 34.92 3.97
599 605 1.550524 GGGTTTGAGCATCTTTTCCCC 59.449 52.381 0.00 0.00 34.92 4.81
600 606 1.550524 GGTTTGAGCATCTTTTCCCCC 59.449 52.381 0.00 0.00 34.92 5.40
618 624 2.821969 CCCCCAACTGAATGCATATAGC 59.178 50.000 0.00 0.00 45.96 2.97
632 638 4.776743 GCATATAGCAAACGATCTTGGTG 58.223 43.478 9.07 0.00 44.79 4.17
633 639 4.511454 GCATATAGCAAACGATCTTGGTGA 59.489 41.667 9.07 0.00 44.79 4.02
634 640 5.333645 GCATATAGCAAACGATCTTGGTGAG 60.334 44.000 9.07 0.05 44.79 3.51
635 641 2.550830 AGCAAACGATCTTGGTGAGT 57.449 45.000 0.00 0.00 35.75 3.41
636 642 3.678056 AGCAAACGATCTTGGTGAGTA 57.322 42.857 0.00 0.00 35.75 2.59
637 643 4.207891 AGCAAACGATCTTGGTGAGTAT 57.792 40.909 0.00 0.00 35.75 2.12
638 644 5.339008 AGCAAACGATCTTGGTGAGTATA 57.661 39.130 0.00 0.00 35.75 1.47
639 645 5.918608 AGCAAACGATCTTGGTGAGTATAT 58.081 37.500 0.00 0.00 35.75 0.86
640 646 7.050970 AGCAAACGATCTTGGTGAGTATATA 57.949 36.000 0.00 0.00 35.75 0.86
641 647 6.924060 AGCAAACGATCTTGGTGAGTATATAC 59.076 38.462 4.60 4.60 35.75 1.47
642 648 6.145696 GCAAACGATCTTGGTGAGTATATACC 59.854 42.308 9.32 0.00 37.48 2.73
643 649 5.979288 ACGATCTTGGTGAGTATATACCC 57.021 43.478 9.32 4.67 36.10 3.69
644 650 4.458295 ACGATCTTGGTGAGTATATACCCG 59.542 45.833 9.32 0.00 36.10 5.28
645 651 4.142447 CGATCTTGGTGAGTATATACCCGG 60.142 50.000 9.32 0.00 36.10 5.73
646 652 4.458256 TCTTGGTGAGTATATACCCGGA 57.542 45.455 0.73 4.28 36.10 5.14
647 653 4.404640 TCTTGGTGAGTATATACCCGGAG 58.595 47.826 0.73 6.44 36.10 4.63
648 654 4.105217 TCTTGGTGAGTATATACCCGGAGA 59.895 45.833 0.73 8.30 36.10 3.71
649 655 4.030314 TGGTGAGTATATACCCGGAGAG 57.970 50.000 0.73 0.00 36.10 3.20
650 656 3.654321 TGGTGAGTATATACCCGGAGAGA 59.346 47.826 0.73 0.00 36.10 3.10
651 657 4.105217 TGGTGAGTATATACCCGGAGAGAA 59.895 45.833 0.73 0.00 36.10 2.87
652 658 5.222275 TGGTGAGTATATACCCGGAGAGAAT 60.222 44.000 0.73 0.00 36.10 2.40
653 659 6.012245 TGGTGAGTATATACCCGGAGAGAATA 60.012 42.308 0.73 0.00 36.10 1.75
654 660 6.888632 GGTGAGTATATACCCGGAGAGAATAA 59.111 42.308 0.73 0.00 0.00 1.40
655 661 7.560626 GGTGAGTATATACCCGGAGAGAATAAT 59.439 40.741 0.73 0.00 0.00 1.28
656 662 8.407064 GTGAGTATATACCCGGAGAGAATAATG 58.593 40.741 0.73 0.00 0.00 1.90
657 663 8.114102 TGAGTATATACCCGGAGAGAATAATGT 58.886 37.037 0.73 0.00 0.00 2.71
658 664 9.624373 GAGTATATACCCGGAGAGAATAATGTA 57.376 37.037 0.73 0.00 0.00 2.29
659 665 9.629878 AGTATATACCCGGAGAGAATAATGTAG 57.370 37.037 0.73 0.00 0.00 2.74
660 666 5.662674 ATACCCGGAGAGAATAATGTAGC 57.337 43.478 0.73 0.00 0.00 3.58
661 667 3.305720 ACCCGGAGAGAATAATGTAGCA 58.694 45.455 0.73 0.00 0.00 3.49
662 668 3.069729 ACCCGGAGAGAATAATGTAGCAC 59.930 47.826 0.73 0.00 0.00 4.40
663 669 3.555168 CCCGGAGAGAATAATGTAGCACC 60.555 52.174 0.73 0.00 0.00 5.01
664 670 3.555168 CCGGAGAGAATAATGTAGCACCC 60.555 52.174 0.00 0.00 0.00 4.61
665 671 3.322254 CGGAGAGAATAATGTAGCACCCT 59.678 47.826 0.00 0.00 0.00 4.34
666 672 4.202264 CGGAGAGAATAATGTAGCACCCTT 60.202 45.833 0.00 0.00 0.00 3.95
667 673 5.685075 CGGAGAGAATAATGTAGCACCCTTT 60.685 44.000 0.00 0.00 0.00 3.11
668 674 5.760743 GGAGAGAATAATGTAGCACCCTTTC 59.239 44.000 0.00 0.00 0.00 2.62
669 675 6.408662 GGAGAGAATAATGTAGCACCCTTTCT 60.409 42.308 0.00 0.00 0.00 2.52
670 676 6.587273 AGAGAATAATGTAGCACCCTTTCTC 58.413 40.000 0.00 0.00 38.59 2.87
671 677 6.385467 AGAGAATAATGTAGCACCCTTTCTCT 59.615 38.462 6.14 6.14 41.85 3.10
672 678 6.587273 AGAATAATGTAGCACCCTTTCTCTC 58.413 40.000 0.00 0.00 0.00 3.20
673 679 6.385467 AGAATAATGTAGCACCCTTTCTCTCT 59.615 38.462 0.00 0.00 0.00 3.10
674 680 4.917906 AATGTAGCACCCTTTCTCTCTT 57.082 40.909 0.00 0.00 0.00 2.85
675 681 3.685139 TGTAGCACCCTTTCTCTCTTG 57.315 47.619 0.00 0.00 0.00 3.02
676 682 2.289694 TGTAGCACCCTTTCTCTCTTGC 60.290 50.000 0.00 0.00 0.00 4.01
677 683 0.767375 AGCACCCTTTCTCTCTTGCA 59.233 50.000 0.00 0.00 32.24 4.08
678 684 1.143684 AGCACCCTTTCTCTCTTGCAA 59.856 47.619 0.00 0.00 32.24 4.08
679 685 2.165998 GCACCCTTTCTCTCTTGCAAT 58.834 47.619 0.00 0.00 0.00 3.56
680 686 2.560105 GCACCCTTTCTCTCTTGCAATT 59.440 45.455 0.00 0.00 0.00 2.32
681 687 3.006217 GCACCCTTTCTCTCTTGCAATTT 59.994 43.478 0.00 0.00 0.00 1.82
682 688 4.502087 GCACCCTTTCTCTCTTGCAATTTT 60.502 41.667 0.00 0.00 0.00 1.82
683 689 4.986659 CACCCTTTCTCTCTTGCAATTTTG 59.013 41.667 0.00 0.00 0.00 2.44
684 690 4.651045 ACCCTTTCTCTCTTGCAATTTTGT 59.349 37.500 0.00 0.00 0.00 2.83
685 691 5.833131 ACCCTTTCTCTCTTGCAATTTTGTA 59.167 36.000 0.00 0.00 0.00 2.41
686 692 6.323739 ACCCTTTCTCTCTTGCAATTTTGTAA 59.676 34.615 0.00 0.00 0.00 2.41
688 694 6.865205 CCTTTCTCTCTTGCAATTTTGTAAGG 59.135 38.462 17.37 6.37 46.54 2.69
689 695 7.255590 CCTTTCTCTCTTGCAATTTTGTAAGGA 60.256 37.037 17.37 13.19 46.54 3.36
690 696 7.581213 TTCTCTCTTGCAATTTTGTAAGGAA 57.419 32.000 17.37 11.77 46.54 3.36
691 697 7.206981 TCTCTCTTGCAATTTTGTAAGGAAG 57.793 36.000 17.37 14.77 46.54 3.46
692 698 6.207417 TCTCTCTTGCAATTTTGTAAGGAAGG 59.793 38.462 17.37 8.59 46.54 3.46
693 699 5.833131 TCTCTTGCAATTTTGTAAGGAAGGT 59.167 36.000 17.37 0.00 46.54 3.50
694 700 6.323739 TCTCTTGCAATTTTGTAAGGAAGGTT 59.676 34.615 17.37 0.00 46.54 3.50
695 701 7.504238 TCTCTTGCAATTTTGTAAGGAAGGTTA 59.496 33.333 17.37 0.68 46.54 2.85
696 702 8.189119 TCTTGCAATTTTGTAAGGAAGGTTAT 57.811 30.769 17.37 0.00 46.54 1.89
697 703 9.303116 TCTTGCAATTTTGTAAGGAAGGTTATA 57.697 29.630 17.37 0.00 46.54 0.98
698 704 9.921637 CTTGCAATTTTGTAAGGAAGGTTATAA 57.078 29.630 11.82 0.00 44.04 0.98
700 706 9.868277 TGCAATTTTGTAAGGAAGGTTATAATG 57.132 29.630 0.00 0.00 0.00 1.90
701 707 9.869757 GCAATTTTGTAAGGAAGGTTATAATGT 57.130 29.630 0.00 0.00 0.00 2.71
709 715 9.043079 GTAAGGAAGGTTATAATGTGTAGAAGC 57.957 37.037 0.00 0.00 0.00 3.86
710 716 7.195374 AGGAAGGTTATAATGTGTAGAAGCA 57.805 36.000 0.00 0.00 0.00 3.91
711 717 7.806180 AGGAAGGTTATAATGTGTAGAAGCAT 58.194 34.615 0.00 0.00 0.00 3.79
712 718 7.716998 AGGAAGGTTATAATGTGTAGAAGCATG 59.283 37.037 0.00 0.00 0.00 4.06
713 719 7.499232 GGAAGGTTATAATGTGTAGAAGCATGT 59.501 37.037 0.00 0.00 0.00 3.21
714 720 8.438676 AAGGTTATAATGTGTAGAAGCATGTC 57.561 34.615 0.00 0.00 0.00 3.06
715 721 7.564793 AGGTTATAATGTGTAGAAGCATGTCA 58.435 34.615 0.00 0.00 0.00 3.58
716 722 7.495934 AGGTTATAATGTGTAGAAGCATGTCAC 59.504 37.037 0.00 0.00 0.00 3.67
717 723 7.254795 GGTTATAATGTGTAGAAGCATGTCACC 60.255 40.741 0.00 0.00 0.00 4.02
718 724 3.701205 ATGTGTAGAAGCATGTCACCA 57.299 42.857 0.00 0.00 0.00 4.17
719 725 3.701205 TGTGTAGAAGCATGTCACCAT 57.299 42.857 0.00 0.00 0.00 3.55
720 726 4.817318 TGTGTAGAAGCATGTCACCATA 57.183 40.909 0.00 0.00 0.00 2.74
721 727 5.357742 TGTGTAGAAGCATGTCACCATAT 57.642 39.130 0.00 0.00 0.00 1.78
722 728 5.118286 TGTGTAGAAGCATGTCACCATATG 58.882 41.667 0.00 0.00 0.00 1.78
723 729 5.104982 TGTGTAGAAGCATGTCACCATATGA 60.105 40.000 3.65 0.00 33.79 2.15
755 761 5.368145 TCAGCATCGAACATATAAAGCCTT 58.632 37.500 0.00 0.00 0.00 4.35
756 762 5.822519 TCAGCATCGAACATATAAAGCCTTT 59.177 36.000 0.00 0.00 0.00 3.11
770 776 0.251073 GCCTTTTAGAGTACCCGCCA 59.749 55.000 0.00 0.00 0.00 5.69
790 796 4.379243 CTGGAGGCCTTCGCACGT 62.379 66.667 6.77 0.00 36.38 4.49
856 862 9.921637 TTTCACCATTGATTTTTACTATTCACC 57.078 29.630 0.00 0.00 0.00 4.02
928 934 6.764308 GACCCATATAATCATTGGTCCATG 57.236 41.667 0.00 0.00 37.00 3.66
1193 1332 2.828520 CCGCATCCTCATATACTCCAGT 59.171 50.000 0.00 0.00 0.00 4.00
1803 2166 8.786898 ACATAATCGTTATGCTCAAAATATGCT 58.213 29.630 13.96 0.00 45.38 3.79
2458 3666 4.070552 GGAAGCGACGAGGGCTGT 62.071 66.667 0.00 0.00 41.39 4.40
2914 4151 2.354103 CGTTGTGGTCTGATGGAGATGT 60.354 50.000 0.00 0.00 31.63 3.06
3006 4243 2.436292 GAGCTGAGGGTGCTGCAG 60.436 66.667 10.11 10.11 41.30 4.41
3016 4253 1.340017 GGGTGCTGCAGATGGTTTCTA 60.340 52.381 20.43 0.00 31.77 2.10
3311 4626 6.541278 TCTCCATGAAAATCATACAAGCAGAG 59.459 38.462 0.00 0.00 34.28 3.35
4133 5471 2.813754 GGTTGCATGTGTGATGTACTGT 59.186 45.455 0.00 0.00 0.00 3.55
4241 5580 8.674263 TTATGACACATAATGTATCATGCACA 57.326 30.769 9.24 2.91 43.57 4.57
5013 6393 4.160439 TCATCTTATCCTCTTGTTCGCTGT 59.840 41.667 0.00 0.00 0.00 4.40
5091 6472 3.421844 AGGTTGCTAAGTTTGATGGTCC 58.578 45.455 0.00 0.00 0.00 4.46
5132 6513 9.850628 TTACTATATCACCGGAATTTCTAATCG 57.149 33.333 9.46 0.00 0.00 3.34
5549 6939 2.969821 TTAAAGTGGGGTGCTCACAT 57.030 45.000 2.21 0.00 37.58 3.21
5567 6957 2.170607 ACATCGCACTTAGGTGGCTTAT 59.829 45.455 7.15 0.00 43.18 1.73
5863 7262 3.038017 CACATCAAGAAACACAAGCACG 58.962 45.455 0.00 0.00 0.00 5.34
6074 7476 0.033504 TCACCGAACAAGAGCACTCC 59.966 55.000 0.00 0.00 0.00 3.85
6075 7477 0.249868 CACCGAACAAGAGCACTCCA 60.250 55.000 0.00 0.00 0.00 3.86
6076 7478 0.249911 ACCGAACAAGAGCACTCCAC 60.250 55.000 0.00 0.00 0.00 4.02
6077 7479 0.034059 CCGAACAAGAGCACTCCACT 59.966 55.000 0.00 0.00 0.00 4.00
6078 7480 1.423395 CGAACAAGAGCACTCCACTC 58.577 55.000 0.00 0.00 0.00 3.51
6409 7834 4.368067 AGTTGTAGGCTAACCCCAAGATA 58.632 43.478 0.00 0.00 36.11 1.98
6508 7975 4.832823 TCATAGATGATAGGCGGAAGTTGA 59.167 41.667 0.00 0.00 0.00 3.18
6539 8007 9.896645 CCCAAACTACTTGCATCTATATGATAT 57.103 33.333 0.00 0.00 34.60 1.63
6819 8290 2.687935 AGTAGCAAACAACACCAACAGG 59.312 45.455 0.00 0.00 0.00 4.00
6821 8292 0.809636 GCAAACAACACCAACAGGGC 60.810 55.000 0.00 0.00 42.05 5.19
6822 8293 0.534412 CAAACAACACCAACAGGGCA 59.466 50.000 0.00 0.00 42.05 5.36
6823 8294 1.066573 CAAACAACACCAACAGGGCAA 60.067 47.619 0.00 0.00 42.05 4.52
6824 8295 1.270907 AACAACACCAACAGGGCAAA 58.729 45.000 0.00 0.00 42.05 3.68
6825 8296 1.494960 ACAACACCAACAGGGCAAAT 58.505 45.000 0.00 0.00 42.05 2.32
6826 8297 1.836802 ACAACACCAACAGGGCAAATT 59.163 42.857 0.00 0.00 42.05 1.82
6827 8298 2.238395 ACAACACCAACAGGGCAAATTT 59.762 40.909 0.00 0.00 42.05 1.82
6828 8299 2.613133 CAACACCAACAGGGCAAATTTG 59.387 45.455 14.03 14.03 42.05 2.32
6829 8300 2.114616 ACACCAACAGGGCAAATTTGA 58.885 42.857 22.31 0.00 42.05 2.69
6830 8301 2.158971 ACACCAACAGGGCAAATTTGAC 60.159 45.455 22.31 19.34 42.05 3.18
6831 8302 2.114616 ACCAACAGGGCAAATTTGACA 58.885 42.857 25.05 0.00 42.05 3.58
6832 8303 2.503356 ACCAACAGGGCAAATTTGACAA 59.497 40.909 25.05 0.00 42.05 3.18
6833 8304 3.136260 ACCAACAGGGCAAATTTGACAAT 59.864 39.130 25.05 10.59 42.05 2.71
6834 8305 4.136051 CCAACAGGGCAAATTTGACAATT 58.864 39.130 25.05 12.73 38.18 2.32
6835 8306 4.579753 CCAACAGGGCAAATTTGACAATTT 59.420 37.500 25.05 11.27 42.37 1.82
6836 8307 5.067544 CCAACAGGGCAAATTTGACAATTTT 59.932 36.000 25.05 9.77 40.09 1.82
6837 8308 6.261826 CCAACAGGGCAAATTTGACAATTTTA 59.738 34.615 25.05 0.00 40.09 1.52
6838 8309 7.201767 CCAACAGGGCAAATTTGACAATTTTAA 60.202 33.333 25.05 0.00 40.09 1.52
6839 8310 7.258022 ACAGGGCAAATTTGACAATTTTAAC 57.742 32.000 25.05 5.51 40.09 2.01
6840 8311 6.262049 ACAGGGCAAATTTGACAATTTTAACC 59.738 34.615 25.05 10.39 40.09 2.85
6841 8312 6.486320 CAGGGCAAATTTGACAATTTTAACCT 59.514 34.615 25.05 16.59 40.09 3.50
6842 8313 6.710295 AGGGCAAATTTGACAATTTTAACCTC 59.290 34.615 25.05 3.56 40.09 3.85
6843 8314 6.347321 GGGCAAATTTGACAATTTTAACCTCG 60.347 38.462 25.05 0.00 40.09 4.63
6844 8315 6.422400 GGCAAATTTGACAATTTTAACCTCGA 59.578 34.615 22.31 0.00 40.09 4.04
6845 8316 7.042389 GGCAAATTTGACAATTTTAACCTCGAA 60.042 33.333 22.31 0.00 40.09 3.71
6846 8317 8.331742 GCAAATTTGACAATTTTAACCTCGAAA 58.668 29.630 22.31 0.00 40.09 3.46
6847 8318 9.631639 CAAATTTGACAATTTTAACCTCGAAAC 57.368 29.630 13.08 0.00 40.09 2.78
6848 8319 7.617533 ATTTGACAATTTTAACCTCGAAACG 57.382 32.000 0.00 0.00 0.00 3.60
6849 8320 5.987777 TGACAATTTTAACCTCGAAACGA 57.012 34.783 0.00 0.00 0.00 3.85
6850 8321 6.360844 TGACAATTTTAACCTCGAAACGAA 57.639 33.333 0.00 0.00 34.74 3.85
6851 8322 6.783162 TGACAATTTTAACCTCGAAACGAAA 58.217 32.000 0.00 0.00 34.74 3.46
6852 8323 7.419204 TGACAATTTTAACCTCGAAACGAAAT 58.581 30.769 0.00 0.00 34.74 2.17
6853 8324 7.588488 TGACAATTTTAACCTCGAAACGAAATC 59.412 33.333 0.00 0.00 34.74 2.17
6854 8325 7.419204 ACAATTTTAACCTCGAAACGAAATCA 58.581 30.769 0.00 0.00 34.74 2.57
6855 8326 7.916450 ACAATTTTAACCTCGAAACGAAATCAA 59.084 29.630 0.00 0.00 34.74 2.57
6856 8327 8.911662 CAATTTTAACCTCGAAACGAAATCAAT 58.088 29.630 0.00 0.00 34.74 2.57
6857 8328 9.471084 AATTTTAACCTCGAAACGAAATCAATT 57.529 25.926 0.00 0.00 34.74 2.32
6858 8329 8.496872 TTTTAACCTCGAAACGAAATCAATTC 57.503 30.769 0.00 0.00 34.74 2.17
6859 8330 5.682943 AACCTCGAAACGAAATCAATTCA 57.317 34.783 0.00 0.00 37.96 2.57
6860 8331 5.030874 ACCTCGAAACGAAATCAATTCAC 57.969 39.130 0.00 0.00 37.96 3.18
6861 8332 4.513692 ACCTCGAAACGAAATCAATTCACA 59.486 37.500 0.00 0.00 37.96 3.58
6862 8333 5.181245 ACCTCGAAACGAAATCAATTCACAT 59.819 36.000 0.00 0.00 37.96 3.21
6863 8334 6.370442 ACCTCGAAACGAAATCAATTCACATA 59.630 34.615 0.00 0.00 37.96 2.29
6864 8335 7.094975 ACCTCGAAACGAAATCAATTCACATAA 60.095 33.333 0.00 0.00 37.96 1.90
6865 8336 7.910162 CCTCGAAACGAAATCAATTCACATAAT 59.090 33.333 0.00 0.00 37.96 1.28
6866 8337 8.599876 TCGAAACGAAATCAATTCACATAATG 57.400 30.769 0.00 0.00 37.96 1.90
6867 8338 8.447053 TCGAAACGAAATCAATTCACATAATGA 58.553 29.630 0.00 0.00 37.96 2.57
6876 8347 2.779755 TCACATAATGAACTGCCCGT 57.220 45.000 0.00 0.00 33.02 5.28
6877 8348 2.355197 TCACATAATGAACTGCCCGTG 58.645 47.619 0.00 0.00 33.02 4.94
6878 8349 2.027653 TCACATAATGAACTGCCCGTGA 60.028 45.455 0.00 0.00 33.02 4.35
6879 8350 2.746904 CACATAATGAACTGCCCGTGAA 59.253 45.455 0.00 0.00 0.00 3.18
6880 8351 3.190327 CACATAATGAACTGCCCGTGAAA 59.810 43.478 0.00 0.00 0.00 2.69
6881 8352 3.190535 ACATAATGAACTGCCCGTGAAAC 59.809 43.478 0.00 0.00 0.00 2.78
6882 8353 1.981256 AATGAACTGCCCGTGAAACT 58.019 45.000 0.00 0.00 31.75 2.66
6883 8354 2.851263 ATGAACTGCCCGTGAAACTA 57.149 45.000 0.00 0.00 31.75 2.24
6884 8355 2.851263 TGAACTGCCCGTGAAACTAT 57.149 45.000 0.00 0.00 31.75 2.12
6885 8356 3.134574 TGAACTGCCCGTGAAACTATT 57.865 42.857 0.00 0.00 31.75 1.73
6886 8357 3.482436 TGAACTGCCCGTGAAACTATTT 58.518 40.909 0.00 0.00 31.75 1.40
6887 8358 3.500680 TGAACTGCCCGTGAAACTATTTC 59.499 43.478 0.00 0.00 40.08 2.17
6888 8359 3.134574 ACTGCCCGTGAAACTATTTCA 57.865 42.857 0.00 0.00 46.68 2.69
6898 8369 4.906618 TGAAACTATTTCACTCCCCTGAC 58.093 43.478 0.00 0.00 44.21 3.51
6899 8370 4.262617 GAAACTATTTCACTCCCCTGACC 58.737 47.826 0.00 0.00 39.45 4.02
6900 8371 3.207044 ACTATTTCACTCCCCTGACCT 57.793 47.619 0.00 0.00 0.00 3.85
6901 8372 3.532102 ACTATTTCACTCCCCTGACCTT 58.468 45.455 0.00 0.00 0.00 3.50
6902 8373 3.916989 ACTATTTCACTCCCCTGACCTTT 59.083 43.478 0.00 0.00 0.00 3.11
6903 8374 3.903530 ATTTCACTCCCCTGACCTTTT 57.096 42.857 0.00 0.00 0.00 2.27
6904 8375 3.680777 TTTCACTCCCCTGACCTTTTT 57.319 42.857 0.00 0.00 0.00 1.94
6905 8376 2.951229 TCACTCCCCTGACCTTTTTC 57.049 50.000 0.00 0.00 0.00 2.29
6906 8377 2.418669 TCACTCCCCTGACCTTTTTCT 58.581 47.619 0.00 0.00 0.00 2.52
6907 8378 2.106511 TCACTCCCCTGACCTTTTTCTG 59.893 50.000 0.00 0.00 0.00 3.02
6908 8379 1.202940 ACTCCCCTGACCTTTTTCTGC 60.203 52.381 0.00 0.00 0.00 4.26
6909 8380 0.850100 TCCCCTGACCTTTTTCTGCA 59.150 50.000 0.00 0.00 0.00 4.41
6910 8381 1.202927 TCCCCTGACCTTTTTCTGCAG 60.203 52.381 7.63 7.63 0.00 4.41
6911 8382 0.600057 CCCTGACCTTTTTCTGCAGC 59.400 55.000 9.47 0.00 0.00 5.25
6912 8383 0.239347 CCTGACCTTTTTCTGCAGCG 59.761 55.000 9.47 0.00 0.00 5.18
6913 8384 0.386478 CTGACCTTTTTCTGCAGCGC 60.386 55.000 9.47 0.00 0.00 5.92
6914 8385 1.081175 GACCTTTTTCTGCAGCGCC 60.081 57.895 9.47 0.00 0.00 6.53
6915 8386 2.259511 CCTTTTTCTGCAGCGCCC 59.740 61.111 9.47 0.00 0.00 6.13
6916 8387 2.126734 CTTTTTCTGCAGCGCCCG 60.127 61.111 9.47 0.00 0.00 6.13
6917 8388 4.341502 TTTTTCTGCAGCGCCCGC 62.342 61.111 9.47 12.24 42.33 6.13
6952 8423 3.188786 GAACGGTGCAGCGCCTAG 61.189 66.667 35.78 12.13 0.00 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
81 84 3.523564 CCCTTCTGTCCTCCTAAAATGGA 59.476 47.826 0.00 0.00 34.52 3.41
102 105 8.476447 ACAGAGTTAAAGCTAACTAATAGGTCC 58.524 37.037 1.81 0.00 46.31 4.46
295 301 1.442520 CTTGTTGTTGCGGCGGATG 60.443 57.895 9.78 0.00 0.00 3.51
296 302 2.625823 CCTTGTTGTTGCGGCGGAT 61.626 57.895 9.78 0.00 0.00 4.18
297 303 3.283684 CCTTGTTGTTGCGGCGGA 61.284 61.111 9.78 1.34 0.00 5.54
353 359 3.357079 GAGGTGGCGGTTGCTGTG 61.357 66.667 0.00 0.00 42.25 3.66
354 360 4.643387 GGAGGTGGCGGTTGCTGT 62.643 66.667 0.00 0.00 42.25 4.40
358 364 4.077184 TAGCGGAGGTGGCGGTTG 62.077 66.667 0.00 0.00 40.22 3.77
359 365 4.078516 GTAGCGGAGGTGGCGGTT 62.079 66.667 0.00 0.00 40.22 4.44
361 367 4.208686 GAGTAGCGGAGGTGGCGG 62.209 72.222 0.00 0.00 40.22 6.13
362 368 4.208686 GGAGTAGCGGAGGTGGCG 62.209 72.222 0.00 0.00 40.22 5.69
363 369 2.760385 AGGAGTAGCGGAGGTGGC 60.760 66.667 0.00 0.00 40.22 5.01
364 370 1.379977 TCAGGAGTAGCGGAGGTGG 60.380 63.158 0.00 0.00 40.22 4.61
365 371 2.010582 GCTCAGGAGTAGCGGAGGTG 62.011 65.000 0.00 0.00 40.22 4.00
366 372 1.755008 GCTCAGGAGTAGCGGAGGT 60.755 63.158 0.00 0.00 44.89 3.85
367 373 2.494530 GGCTCAGGAGTAGCGGAGG 61.495 68.421 0.00 0.00 41.03 4.30
368 374 2.494530 GGGCTCAGGAGTAGCGGAG 61.495 68.421 0.00 0.00 41.03 4.63
369 375 2.442272 GGGCTCAGGAGTAGCGGA 60.442 66.667 0.00 0.00 41.03 5.54
370 376 3.541713 GGGGCTCAGGAGTAGCGG 61.542 72.222 0.00 0.00 41.03 5.52
371 377 1.899437 TTTGGGGCTCAGGAGTAGCG 61.899 60.000 0.00 0.00 41.03 4.26
372 378 0.328258 TTTTGGGGCTCAGGAGTAGC 59.672 55.000 0.00 0.00 39.33 3.58
373 379 1.680249 GCTTTTGGGGCTCAGGAGTAG 60.680 57.143 0.00 0.00 0.00 2.57
374 380 0.328258 GCTTTTGGGGCTCAGGAGTA 59.672 55.000 0.00 0.00 0.00 2.59
375 381 1.075659 GCTTTTGGGGCTCAGGAGT 59.924 57.895 0.00 0.00 0.00 3.85
376 382 1.381851 AGCTTTTGGGGCTCAGGAG 59.618 57.895 0.00 0.00 34.70 3.69
377 383 3.593048 AGCTTTTGGGGCTCAGGA 58.407 55.556 0.00 0.00 34.70 3.86
382 388 0.393537 CTCATCGAGCTTTTGGGGCT 60.394 55.000 0.00 0.00 43.26 5.19
383 389 0.678048 ACTCATCGAGCTTTTGGGGC 60.678 55.000 0.00 0.00 32.04 5.80
384 390 1.089920 CACTCATCGAGCTTTTGGGG 58.910 55.000 0.00 0.00 32.04 4.96
385 391 2.099141 TCACTCATCGAGCTTTTGGG 57.901 50.000 0.00 0.00 32.04 4.12
386 392 3.070018 AGTTCACTCATCGAGCTTTTGG 58.930 45.455 0.00 0.00 32.04 3.28
387 393 3.666374 GCAGTTCACTCATCGAGCTTTTG 60.666 47.826 0.00 0.00 32.04 2.44
388 394 2.481952 GCAGTTCACTCATCGAGCTTTT 59.518 45.455 0.00 0.00 32.04 2.27
389 395 2.072298 GCAGTTCACTCATCGAGCTTT 58.928 47.619 0.00 0.00 32.04 3.51
390 396 1.719600 GCAGTTCACTCATCGAGCTT 58.280 50.000 0.00 0.00 32.04 3.74
391 397 0.457509 CGCAGTTCACTCATCGAGCT 60.458 55.000 0.00 0.00 32.04 4.09
392 398 1.416813 CCGCAGTTCACTCATCGAGC 61.417 60.000 0.00 0.00 32.04 5.03
393 399 0.171231 TCCGCAGTTCACTCATCGAG 59.829 55.000 0.00 0.00 35.52 4.04
394 400 0.171231 CTCCGCAGTTCACTCATCGA 59.829 55.000 0.00 0.00 0.00 3.59
395 401 0.803768 CCTCCGCAGTTCACTCATCG 60.804 60.000 0.00 0.00 0.00 3.84
396 402 1.086634 GCCTCCGCAGTTCACTCATC 61.087 60.000 0.00 0.00 34.03 2.92
397 403 1.078848 GCCTCCGCAGTTCACTCAT 60.079 57.895 0.00 0.00 34.03 2.90
398 404 0.898326 TAGCCTCCGCAGTTCACTCA 60.898 55.000 0.00 0.00 37.52 3.41
399 405 0.458716 GTAGCCTCCGCAGTTCACTC 60.459 60.000 0.00 0.00 37.52 3.51
400 406 1.185618 TGTAGCCTCCGCAGTTCACT 61.186 55.000 0.00 0.00 37.52 3.41
401 407 1.014564 GTGTAGCCTCCGCAGTTCAC 61.015 60.000 0.00 0.00 37.52 3.18
402 408 1.292223 GTGTAGCCTCCGCAGTTCA 59.708 57.895 0.00 0.00 37.52 3.18
403 409 1.014564 GTGTGTAGCCTCCGCAGTTC 61.015 60.000 0.00 0.00 37.52 3.01
404 410 1.004918 GTGTGTAGCCTCCGCAGTT 60.005 57.895 0.00 0.00 37.52 3.16
405 411 2.657237 GTGTGTAGCCTCCGCAGT 59.343 61.111 0.00 0.00 37.52 4.40
406 412 2.507102 CGTGTGTAGCCTCCGCAG 60.507 66.667 0.00 0.00 37.52 5.18
407 413 4.735132 GCGTGTGTAGCCTCCGCA 62.735 66.667 0.00 0.00 43.53 5.69
433 439 3.499929 ATACCGATCTGCGCACCGG 62.500 63.158 28.55 28.55 46.65 5.28
434 440 2.016704 GATACCGATCTGCGCACCG 61.017 63.158 5.66 10.68 39.11 4.94
435 441 2.016704 CGATACCGATCTGCGCACC 61.017 63.158 5.66 0.00 39.11 5.01
436 442 1.269444 GACGATACCGATCTGCGCAC 61.269 60.000 5.66 0.00 39.11 5.34
437 443 1.008881 GACGATACCGATCTGCGCA 60.009 57.895 10.98 10.98 39.11 6.09
438 444 1.729838 GGACGATACCGATCTGCGC 60.730 63.158 0.00 0.00 39.11 6.09
439 445 1.081376 GGGACGATACCGATCTGCG 60.081 63.158 0.00 0.00 39.50 5.18
440 446 1.289380 GGGGACGATACCGATCTGC 59.711 63.158 0.00 0.00 39.50 4.26
453 459 1.906824 TGAGGAGTGTGACGGGGAC 60.907 63.158 0.00 0.00 0.00 4.46
454 460 1.906824 GTGAGGAGTGTGACGGGGA 60.907 63.158 0.00 0.00 0.00 4.81
455 461 2.657237 GTGAGGAGTGTGACGGGG 59.343 66.667 0.00 0.00 0.00 5.73
456 462 2.657237 GGTGAGGAGTGTGACGGG 59.343 66.667 0.00 0.00 0.00 5.28
457 463 2.258591 CGGTGAGGAGTGTGACGG 59.741 66.667 0.00 0.00 0.00 4.79
458 464 2.430921 GCGGTGAGGAGTGTGACG 60.431 66.667 0.00 0.00 0.00 4.35
459 465 2.048127 GGCGGTGAGGAGTGTGAC 60.048 66.667 0.00 0.00 0.00 3.67
460 466 3.680786 CGGCGGTGAGGAGTGTGA 61.681 66.667 0.00 0.00 0.00 3.58
461 467 3.916392 GACGGCGGTGAGGAGTGTG 62.916 68.421 13.24 0.00 0.00 3.82
462 468 3.681835 GACGGCGGTGAGGAGTGT 61.682 66.667 13.24 0.00 0.00 3.55
463 469 3.680786 TGACGGCGGTGAGGAGTG 61.681 66.667 13.24 0.00 0.00 3.51
464 470 3.681835 GTGACGGCGGTGAGGAGT 61.682 66.667 13.24 0.00 0.00 3.85
465 471 4.436998 GGTGACGGCGGTGAGGAG 62.437 72.222 13.24 0.00 0.00 3.69
468 474 4.308458 TTGGGTGACGGCGGTGAG 62.308 66.667 13.24 0.00 0.00 3.51
469 475 4.308458 CTTGGGTGACGGCGGTGA 62.308 66.667 13.24 0.00 0.00 4.02
475 481 4.308458 TGACGCCTTGGGTGACGG 62.308 66.667 4.03 0.00 36.58 4.79
476 482 3.041940 GTGACGCCTTGGGTGACG 61.042 66.667 4.03 0.00 36.58 4.35
477 483 2.668550 GGTGACGCCTTGGGTGAC 60.669 66.667 4.03 0.00 36.58 3.67
478 484 3.948719 GGGTGACGCCTTGGGTGA 61.949 66.667 4.75 0.00 36.58 4.02
488 494 3.353836 CCACTTTGCGGGGTGACG 61.354 66.667 4.67 0.00 35.69 4.35
489 495 3.670377 GCCACTTTGCGGGGTGAC 61.670 66.667 4.67 0.00 35.69 3.67
490 496 4.196778 TGCCACTTTGCGGGGTGA 62.197 61.111 4.67 0.00 35.69 4.02
491 497 3.673484 CTGCCACTTTGCGGGGTG 61.673 66.667 0.00 0.00 33.86 4.61
492 498 3.850098 CTCTGCCACTTTGCGGGGT 62.850 63.158 0.00 0.00 38.20 4.95
493 499 3.058160 CTCTGCCACTTTGCGGGG 61.058 66.667 0.00 0.00 38.20 5.73
494 500 3.058160 CCTCTGCCACTTTGCGGG 61.058 66.667 0.00 0.00 38.20 6.13
495 501 2.032528 TCCTCTGCCACTTTGCGG 59.967 61.111 0.00 0.00 39.04 5.69
496 502 2.328099 GGTCCTCTGCCACTTTGCG 61.328 63.158 0.00 0.00 0.00 4.85
497 503 1.228245 TGGTCCTCTGCCACTTTGC 60.228 57.895 0.00 0.00 0.00 3.68
498 504 0.397941 TCTGGTCCTCTGCCACTTTG 59.602 55.000 0.00 0.00 31.85 2.77
499 505 1.140312 TTCTGGTCCTCTGCCACTTT 58.860 50.000 0.00 0.00 31.85 2.66
500 506 1.140312 TTTCTGGTCCTCTGCCACTT 58.860 50.000 0.00 0.00 31.85 3.16
501 507 0.398318 GTTTCTGGTCCTCTGCCACT 59.602 55.000 0.00 0.00 31.85 4.00
502 508 0.606673 GGTTTCTGGTCCTCTGCCAC 60.607 60.000 0.00 0.00 31.85 5.01
503 509 1.059584 TGGTTTCTGGTCCTCTGCCA 61.060 55.000 0.00 0.00 34.42 4.92
504 510 0.110486 TTGGTTTCTGGTCCTCTGCC 59.890 55.000 0.00 0.00 0.00 4.85
505 511 1.072331 TCTTGGTTTCTGGTCCTCTGC 59.928 52.381 0.00 0.00 0.00 4.26
506 512 2.772287 GTCTTGGTTTCTGGTCCTCTG 58.228 52.381 0.00 0.00 0.00 3.35
507 513 1.344763 CGTCTTGGTTTCTGGTCCTCT 59.655 52.381 0.00 0.00 0.00 3.69
508 514 1.343465 TCGTCTTGGTTTCTGGTCCTC 59.657 52.381 0.00 0.00 0.00 3.71
509 515 1.344763 CTCGTCTTGGTTTCTGGTCCT 59.655 52.381 0.00 0.00 0.00 3.85
510 516 1.797025 CTCGTCTTGGTTTCTGGTCC 58.203 55.000 0.00 0.00 0.00 4.46
511 517 1.149148 GCTCGTCTTGGTTTCTGGTC 58.851 55.000 0.00 0.00 0.00 4.02
512 518 0.468226 TGCTCGTCTTGGTTTCTGGT 59.532 50.000 0.00 0.00 0.00 4.00
513 519 0.868406 GTGCTCGTCTTGGTTTCTGG 59.132 55.000 0.00 0.00 0.00 3.86
514 520 0.868406 GGTGCTCGTCTTGGTTTCTG 59.132 55.000 0.00 0.00 0.00 3.02
515 521 0.759346 AGGTGCTCGTCTTGGTTTCT 59.241 50.000 0.00 0.00 0.00 2.52
516 522 0.868406 CAGGTGCTCGTCTTGGTTTC 59.132 55.000 0.00 0.00 0.00 2.78
517 523 0.468226 TCAGGTGCTCGTCTTGGTTT 59.532 50.000 0.00 0.00 0.00 3.27
518 524 0.249911 GTCAGGTGCTCGTCTTGGTT 60.250 55.000 0.00 0.00 0.00 3.67
519 525 1.367840 GTCAGGTGCTCGTCTTGGT 59.632 57.895 0.00 0.00 0.00 3.67
520 526 0.249868 TTGTCAGGTGCTCGTCTTGG 60.250 55.000 0.00 0.00 0.00 3.61
521 527 0.861837 GTTGTCAGGTGCTCGTCTTG 59.138 55.000 0.00 0.00 0.00 3.02
522 528 0.597637 CGTTGTCAGGTGCTCGTCTT 60.598 55.000 0.00 0.00 0.00 3.01
523 529 1.007271 CGTTGTCAGGTGCTCGTCT 60.007 57.895 0.00 0.00 0.00 4.18
524 530 1.004277 CTCGTTGTCAGGTGCTCGTC 61.004 60.000 0.00 0.00 0.00 4.20
525 531 1.007271 CTCGTTGTCAGGTGCTCGT 60.007 57.895 0.00 0.00 0.00 4.18
526 532 1.004277 GACTCGTTGTCAGGTGCTCG 61.004 60.000 6.48 0.00 44.73 5.03
527 533 2.815722 GACTCGTTGTCAGGTGCTC 58.184 57.895 6.48 0.00 44.73 4.26
535 541 1.560860 GCACTGCTGGACTCGTTGTC 61.561 60.000 0.00 3.42 44.63 3.18
536 542 1.595382 GCACTGCTGGACTCGTTGT 60.595 57.895 0.00 0.00 0.00 3.32
537 543 0.882042 AAGCACTGCTGGACTCGTTG 60.882 55.000 3.73 0.00 39.62 4.10
538 544 0.679505 TAAGCACTGCTGGACTCGTT 59.320 50.000 3.73 0.00 39.62 3.85
539 545 0.898320 ATAAGCACTGCTGGACTCGT 59.102 50.000 3.73 0.00 39.62 4.18
540 546 1.929836 GAATAAGCACTGCTGGACTCG 59.070 52.381 3.73 0.00 39.62 4.18
541 547 2.284190 GGAATAAGCACTGCTGGACTC 58.716 52.381 3.73 0.00 39.62 3.36
542 548 1.630369 TGGAATAAGCACTGCTGGACT 59.370 47.619 3.73 0.00 39.62 3.85
543 549 2.113860 TGGAATAAGCACTGCTGGAC 57.886 50.000 3.73 0.00 39.62 4.02
544 550 3.455910 ACTATGGAATAAGCACTGCTGGA 59.544 43.478 3.73 0.00 39.62 3.86
545 551 3.562973 CACTATGGAATAAGCACTGCTGG 59.437 47.826 3.73 0.00 39.62 4.85
546 552 4.034858 CACACTATGGAATAAGCACTGCTG 59.965 45.833 3.73 0.00 39.62 4.41
547 553 4.080919 TCACACTATGGAATAAGCACTGCT 60.081 41.667 0.00 0.00 42.56 4.24
548 554 4.191544 TCACACTATGGAATAAGCACTGC 58.808 43.478 0.00 0.00 0.00 4.40
549 555 5.468072 GGATCACACTATGGAATAAGCACTG 59.532 44.000 0.00 0.00 0.00 3.66
550 556 5.455326 GGGATCACACTATGGAATAAGCACT 60.455 44.000 0.00 0.00 0.00 4.40
551 557 4.757149 GGGATCACACTATGGAATAAGCAC 59.243 45.833 0.00 0.00 0.00 4.40
552 558 4.660303 AGGGATCACACTATGGAATAAGCA 59.340 41.667 0.00 0.00 0.00 3.91
553 559 4.999950 CAGGGATCACACTATGGAATAAGC 59.000 45.833 0.00 0.00 0.00 3.09
554 560 5.513788 CCCAGGGATCACACTATGGAATAAG 60.514 48.000 0.00 0.00 0.00 1.73
555 561 4.350816 CCCAGGGATCACACTATGGAATAA 59.649 45.833 0.00 0.00 0.00 1.40
556 562 3.909995 CCCAGGGATCACACTATGGAATA 59.090 47.826 0.00 0.00 0.00 1.75
557 563 2.713167 CCCAGGGATCACACTATGGAAT 59.287 50.000 0.00 0.00 0.00 3.01
558 564 2.126882 CCCAGGGATCACACTATGGAA 58.873 52.381 0.00 0.00 0.00 3.53
559 565 1.695664 CCCCAGGGATCACACTATGGA 60.696 57.143 7.25 0.00 37.50 3.41
560 566 0.767375 CCCCAGGGATCACACTATGG 59.233 60.000 7.25 0.00 37.50 2.74
577 583 1.550524 GGAAAAGATGCTCAAACCCCC 59.449 52.381 0.00 0.00 0.00 5.40
578 584 1.550524 GGGAAAAGATGCTCAAACCCC 59.449 52.381 0.00 0.00 0.00 4.95
579 585 1.550524 GGGGAAAAGATGCTCAAACCC 59.449 52.381 0.00 0.00 35.80 4.11
580 586 1.550524 GGGGGAAAAGATGCTCAAACC 59.449 52.381 0.00 0.00 0.00 3.27
597 603 2.821969 GCTATATGCATTCAGTTGGGGG 59.178 50.000 3.54 0.00 42.31 5.40
610 616 4.511454 TCACCAAGATCGTTTGCTATATGC 59.489 41.667 0.00 0.00 43.25 3.14
611 617 5.755375 ACTCACCAAGATCGTTTGCTATATG 59.245 40.000 0.00 0.00 0.00 1.78
612 618 5.918608 ACTCACCAAGATCGTTTGCTATAT 58.081 37.500 0.00 0.00 0.00 0.86
613 619 5.339008 ACTCACCAAGATCGTTTGCTATA 57.661 39.130 0.00 0.00 0.00 1.31
614 620 4.207891 ACTCACCAAGATCGTTTGCTAT 57.792 40.909 0.00 0.00 0.00 2.97
615 621 3.678056 ACTCACCAAGATCGTTTGCTA 57.322 42.857 0.00 0.00 0.00 3.49
616 622 2.550830 ACTCACCAAGATCGTTTGCT 57.449 45.000 0.00 0.00 0.00 3.91
617 623 6.145696 GGTATATACTCACCAAGATCGTTTGC 59.854 42.308 12.54 0.00 34.77 3.68
618 624 6.645415 GGGTATATACTCACCAAGATCGTTTG 59.355 42.308 12.54 0.00 36.48 2.93
619 625 6.516194 CGGGTATATACTCACCAAGATCGTTT 60.516 42.308 13.19 0.00 36.48 3.60
620 626 5.048224 CGGGTATATACTCACCAAGATCGTT 60.048 44.000 13.19 0.00 36.48 3.85
621 627 4.458295 CGGGTATATACTCACCAAGATCGT 59.542 45.833 13.19 0.00 36.48 3.73
622 628 4.142447 CCGGGTATATACTCACCAAGATCG 60.142 50.000 13.19 0.00 36.48 3.69
623 629 5.014858 TCCGGGTATATACTCACCAAGATC 58.985 45.833 13.19 0.00 36.48 2.75
624 630 5.006896 TCCGGGTATATACTCACCAAGAT 57.993 43.478 13.19 0.00 36.48 2.40
625 631 4.105217 TCTCCGGGTATATACTCACCAAGA 59.895 45.833 13.19 6.45 36.48 3.02
626 632 4.404640 TCTCCGGGTATATACTCACCAAG 58.595 47.826 13.19 4.39 36.48 3.61
627 633 4.105217 TCTCTCCGGGTATATACTCACCAA 59.895 45.833 13.19 0.00 36.48 3.67
628 634 3.654321 TCTCTCCGGGTATATACTCACCA 59.346 47.826 13.19 0.00 36.48 4.17
629 635 4.298103 TCTCTCCGGGTATATACTCACC 57.702 50.000 13.19 5.25 0.00 4.02
630 636 7.934855 TTATTCTCTCCGGGTATATACTCAC 57.065 40.000 13.19 3.66 0.00 3.51
631 637 8.114102 ACATTATTCTCTCCGGGTATATACTCA 58.886 37.037 13.19 0.00 0.00 3.41
632 638 8.522542 ACATTATTCTCTCCGGGTATATACTC 57.477 38.462 12.54 7.78 0.00 2.59
633 639 9.629878 CTACATTATTCTCTCCGGGTATATACT 57.370 37.037 12.54 0.00 0.00 2.12
634 640 8.351461 GCTACATTATTCTCTCCGGGTATATAC 58.649 40.741 0.00 4.14 0.00 1.47
635 641 8.057011 TGCTACATTATTCTCTCCGGGTATATA 58.943 37.037 0.00 0.00 0.00 0.86
636 642 6.895756 TGCTACATTATTCTCTCCGGGTATAT 59.104 38.462 0.00 0.00 0.00 0.86
637 643 6.152323 GTGCTACATTATTCTCTCCGGGTATA 59.848 42.308 0.00 0.00 0.00 1.47
638 644 5.047235 GTGCTACATTATTCTCTCCGGGTAT 60.047 44.000 0.00 0.00 0.00 2.73
639 645 4.280174 GTGCTACATTATTCTCTCCGGGTA 59.720 45.833 0.00 0.00 0.00 3.69
640 646 3.069729 GTGCTACATTATTCTCTCCGGGT 59.930 47.826 0.00 0.00 0.00 5.28
641 647 3.555168 GGTGCTACATTATTCTCTCCGGG 60.555 52.174 0.00 0.00 0.00 5.73
642 648 3.555168 GGGTGCTACATTATTCTCTCCGG 60.555 52.174 0.00 0.00 0.00 5.14
643 649 3.322254 AGGGTGCTACATTATTCTCTCCG 59.678 47.826 0.00 0.00 0.00 4.63
644 650 4.965200 AGGGTGCTACATTATTCTCTCC 57.035 45.455 0.00 0.00 0.00 3.71
645 651 6.587273 AGAAAGGGTGCTACATTATTCTCTC 58.413 40.000 0.00 0.00 0.00 3.20
646 652 6.385467 AGAGAAAGGGTGCTACATTATTCTCT 59.615 38.462 8.47 8.47 44.11 3.10
647 653 6.587273 AGAGAAAGGGTGCTACATTATTCTC 58.413 40.000 0.00 0.00 40.97 2.87
648 654 6.385467 AGAGAGAAAGGGTGCTACATTATTCT 59.615 38.462 0.00 0.00 0.00 2.40
649 655 6.587273 AGAGAGAAAGGGTGCTACATTATTC 58.413 40.000 0.00 0.00 0.00 1.75
650 656 6.567602 AGAGAGAAAGGGTGCTACATTATT 57.432 37.500 0.00 0.00 0.00 1.40
651 657 6.352516 CAAGAGAGAAAGGGTGCTACATTAT 58.647 40.000 0.00 0.00 0.00 1.28
652 658 5.734720 CAAGAGAGAAAGGGTGCTACATTA 58.265 41.667 0.00 0.00 0.00 1.90
653 659 4.583871 CAAGAGAGAAAGGGTGCTACATT 58.416 43.478 0.00 0.00 0.00 2.71
654 660 3.620966 GCAAGAGAGAAAGGGTGCTACAT 60.621 47.826 0.00 0.00 0.00 2.29
655 661 2.289694 GCAAGAGAGAAAGGGTGCTACA 60.290 50.000 0.00 0.00 0.00 2.74
656 662 2.289694 TGCAAGAGAGAAAGGGTGCTAC 60.290 50.000 0.00 0.00 33.19 3.58
657 663 1.977854 TGCAAGAGAGAAAGGGTGCTA 59.022 47.619 0.00 0.00 33.19 3.49
658 664 0.767375 TGCAAGAGAGAAAGGGTGCT 59.233 50.000 0.00 0.00 33.19 4.40
659 665 1.609208 TTGCAAGAGAGAAAGGGTGC 58.391 50.000 0.00 0.00 0.00 5.01
660 666 4.861102 AAATTGCAAGAGAGAAAGGGTG 57.139 40.909 4.94 0.00 0.00 4.61
661 667 4.651045 ACAAAATTGCAAGAGAGAAAGGGT 59.349 37.500 4.94 0.00 0.00 4.34
662 668 5.205759 ACAAAATTGCAAGAGAGAAAGGG 57.794 39.130 4.94 0.00 0.00 3.95
663 669 6.865205 CCTTACAAAATTGCAAGAGAGAAAGG 59.135 38.462 4.94 10.15 34.24 3.11
664 670 7.651808 TCCTTACAAAATTGCAAGAGAGAAAG 58.348 34.615 4.94 4.98 34.24 2.62
665 671 7.581213 TCCTTACAAAATTGCAAGAGAGAAA 57.419 32.000 4.94 0.00 34.24 2.52
666 672 7.255590 CCTTCCTTACAAAATTGCAAGAGAGAA 60.256 37.037 4.94 3.17 34.24 2.87
667 673 6.207417 CCTTCCTTACAAAATTGCAAGAGAGA 59.793 38.462 4.94 0.00 34.24 3.10
668 674 6.015940 ACCTTCCTTACAAAATTGCAAGAGAG 60.016 38.462 4.94 0.00 34.24 3.20
669 675 5.833131 ACCTTCCTTACAAAATTGCAAGAGA 59.167 36.000 4.94 1.92 34.24 3.10
670 676 6.089249 ACCTTCCTTACAAAATTGCAAGAG 57.911 37.500 4.94 0.00 34.24 2.85
671 677 6.478512 AACCTTCCTTACAAAATTGCAAGA 57.521 33.333 4.94 0.00 34.24 3.02
672 678 9.921637 TTATAACCTTCCTTACAAAATTGCAAG 57.078 29.630 4.94 0.07 32.56 4.01
674 680 9.868277 CATTATAACCTTCCTTACAAAATTGCA 57.132 29.630 0.00 0.00 0.00 4.08
675 681 9.869757 ACATTATAACCTTCCTTACAAAATTGC 57.130 29.630 0.00 0.00 0.00 3.56
683 689 9.043079 GCTTCTACACATTATAACCTTCCTTAC 57.957 37.037 0.00 0.00 0.00 2.34
684 690 8.764558 TGCTTCTACACATTATAACCTTCCTTA 58.235 33.333 0.00 0.00 0.00 2.69
685 691 7.630082 TGCTTCTACACATTATAACCTTCCTT 58.370 34.615 0.00 0.00 0.00 3.36
686 692 7.195374 TGCTTCTACACATTATAACCTTCCT 57.805 36.000 0.00 0.00 0.00 3.36
687 693 7.499232 ACATGCTTCTACACATTATAACCTTCC 59.501 37.037 0.00 0.00 0.00 3.46
688 694 8.438676 ACATGCTTCTACACATTATAACCTTC 57.561 34.615 0.00 0.00 0.00 3.46
689 695 8.046708 TGACATGCTTCTACACATTATAACCTT 58.953 33.333 0.00 0.00 0.00 3.50
690 696 7.495934 GTGACATGCTTCTACACATTATAACCT 59.504 37.037 0.00 0.00 0.00 3.50
691 697 7.254795 GGTGACATGCTTCTACACATTATAACC 60.255 40.741 0.00 0.00 33.82 2.85
692 698 7.279981 TGGTGACATGCTTCTACACATTATAAC 59.720 37.037 0.00 0.00 33.40 1.89
693 699 7.334858 TGGTGACATGCTTCTACACATTATAA 58.665 34.615 0.00 0.00 33.40 0.98
694 700 6.883744 TGGTGACATGCTTCTACACATTATA 58.116 36.000 0.00 0.00 33.40 0.98
695 701 5.744171 TGGTGACATGCTTCTACACATTAT 58.256 37.500 0.00 0.00 33.40 1.28
696 702 5.159273 TGGTGACATGCTTCTACACATTA 57.841 39.130 0.00 0.00 33.40 1.90
697 703 4.019792 TGGTGACATGCTTCTACACATT 57.980 40.909 0.00 0.00 33.40 2.71
698 704 3.701205 TGGTGACATGCTTCTACACAT 57.299 42.857 0.00 0.00 33.40 3.21
721 727 4.455190 TGTTCGATGCTGATGAAAATGTCA 59.545 37.500 0.00 0.00 41.67 3.58
722 728 4.973396 TGTTCGATGCTGATGAAAATGTC 58.027 39.130 0.00 0.00 0.00 3.06
723 729 5.571784 ATGTTCGATGCTGATGAAAATGT 57.428 34.783 0.00 0.00 0.00 2.71
724 730 9.667989 TTTATATGTTCGATGCTGATGAAAATG 57.332 29.630 0.00 0.00 0.00 2.32
725 731 9.888878 CTTTATATGTTCGATGCTGATGAAAAT 57.111 29.630 0.00 0.00 0.00 1.82
726 732 7.857389 GCTTTATATGTTCGATGCTGATGAAAA 59.143 33.333 0.00 0.00 0.00 2.29
727 733 7.355017 GCTTTATATGTTCGATGCTGATGAAA 58.645 34.615 0.00 0.00 0.00 2.69
728 734 6.073058 GGCTTTATATGTTCGATGCTGATGAA 60.073 38.462 0.00 0.00 0.00 2.57
729 735 5.409520 GGCTTTATATGTTCGATGCTGATGA 59.590 40.000 0.00 0.00 0.00 2.92
730 736 5.410746 AGGCTTTATATGTTCGATGCTGATG 59.589 40.000 0.00 0.00 0.00 3.07
731 737 5.555017 AGGCTTTATATGTTCGATGCTGAT 58.445 37.500 0.00 0.00 0.00 2.90
732 738 4.960938 AGGCTTTATATGTTCGATGCTGA 58.039 39.130 0.00 0.00 0.00 4.26
733 739 5.679734 AAGGCTTTATATGTTCGATGCTG 57.320 39.130 0.00 0.00 0.00 4.41
734 740 6.699575 AAAAGGCTTTATATGTTCGATGCT 57.300 33.333 13.77 0.00 0.00 3.79
755 761 3.536956 CAGAATGGCGGGTACTCTAAA 57.463 47.619 0.00 0.00 0.00 1.85
770 776 1.078143 GTGCGAAGGCCTCCAGAAT 60.078 57.895 5.23 0.00 38.85 2.40
856 862 3.241995 GCGAGGTGTAACAAAATCTAGCG 60.242 47.826 0.00 0.00 39.98 4.26
1072 1082 2.677848 GGGTGGGGAGAAAGGAGC 59.322 66.667 0.00 0.00 0.00 4.70
1193 1332 0.395724 TCTCTCGCTGGCATAGTGGA 60.396 55.000 0.00 0.00 37.51 4.02
2458 3666 1.174078 TGACCTTGTCTACACCGCGA 61.174 55.000 8.23 0.00 33.15 5.87
2914 4151 6.374333 GTCAGACAATGGTTTCTAGGCAAATA 59.626 38.462 0.00 0.00 0.00 1.40
3016 4253 9.895138 CCAATCCATAGGAAAGAAAAATCAAAT 57.105 29.630 0.00 0.00 34.34 2.32
3311 4626 1.959282 GGCATCAATTCAGATCACCCC 59.041 52.381 0.00 0.00 0.00 4.95
4133 5471 5.233988 ACAAGTGCAAAAAGCTACAAACAA 58.766 33.333 0.00 0.00 45.94 2.83
5039 6419 8.738645 AGGAGTCATTACCAAAATAAGCTTAG 57.261 34.615 12.54 0.20 0.00 2.18
5070 6451 3.074538 AGGACCATCAAACTTAGCAACCT 59.925 43.478 0.00 0.00 0.00 3.50
5161 6542 7.454380 TGGTCATTCCTCCAGAAACAATTATTT 59.546 33.333 0.00 0.00 38.21 1.40
5549 6939 1.134521 CCATAAGCCACCTAAGTGCGA 60.135 52.381 0.00 0.00 43.09 5.10
5567 6957 6.015519 CCACAAACCAATTTCAGTAATCTCCA 60.016 38.462 0.00 0.00 0.00 3.86
5863 7262 6.347483 GTACTGCCTTTTCTACAGTAAACTGC 60.347 42.308 10.01 0.00 45.64 4.40
6074 7476 2.538333 GCATCTAATGTTGCAGCGAGTG 60.538 50.000 0.00 0.00 38.42 3.51
6075 7477 1.667724 GCATCTAATGTTGCAGCGAGT 59.332 47.619 0.00 0.00 38.42 4.18
6076 7478 1.667212 TGCATCTAATGTTGCAGCGAG 59.333 47.619 0.00 0.00 42.05 5.03
6077 7479 1.736612 TGCATCTAATGTTGCAGCGA 58.263 45.000 0.00 0.00 42.05 4.93
6078 7480 2.447250 CTTGCATCTAATGTTGCAGCG 58.553 47.619 0.00 0.00 45.82 5.18
6391 7802 6.683312 ACTATTATCTTGGGGTTAGCCTAC 57.317 41.667 0.00 0.00 34.45 3.18
6409 7834 7.144722 TCACATTTGCTTGATCGAAACTATT 57.855 32.000 0.00 0.00 0.00 1.73
6508 7975 7.961326 ATAGATGCAAGTAGTTTGGGAAAAT 57.039 32.000 0.00 0.00 37.26 1.82
6539 8007 5.708230 AGTGAGAAAGTTTTGTGTGTTACCA 59.292 36.000 0.00 0.00 0.00 3.25
6788 8259 0.310854 GTTTGCTACTTGCCGCTGTT 59.689 50.000 0.00 0.00 42.00 3.16
6819 8290 6.422400 TCGAGGTTAAAATTGTCAAATTTGCC 59.578 34.615 13.54 2.32 43.63 4.52
6821 8292 9.631639 GTTTCGAGGTTAAAATTGTCAAATTTG 57.368 29.630 12.15 12.15 43.63 2.32
6822 8293 8.536407 CGTTTCGAGGTTAAAATTGTCAAATTT 58.464 29.630 4.14 4.14 45.81 1.82
6823 8294 7.916450 TCGTTTCGAGGTTAAAATTGTCAAATT 59.084 29.630 0.00 0.00 37.61 1.82
6824 8295 7.419204 TCGTTTCGAGGTTAAAATTGTCAAAT 58.581 30.769 0.00 0.00 0.00 2.32
6825 8296 6.783162 TCGTTTCGAGGTTAAAATTGTCAAA 58.217 32.000 0.00 0.00 0.00 2.69
6826 8297 6.360844 TCGTTTCGAGGTTAAAATTGTCAA 57.639 33.333 0.00 0.00 0.00 3.18
6827 8298 5.987777 TCGTTTCGAGGTTAAAATTGTCA 57.012 34.783 0.00 0.00 0.00 3.58
6828 8299 7.588488 TGATTTCGTTTCGAGGTTAAAATTGTC 59.412 33.333 0.00 0.00 37.14 3.18
6829 8300 7.419204 TGATTTCGTTTCGAGGTTAAAATTGT 58.581 30.769 0.00 0.00 37.14 2.71
6830 8301 7.845617 TGATTTCGTTTCGAGGTTAAAATTG 57.154 32.000 0.00 0.00 37.14 2.32
6831 8302 9.471084 AATTGATTTCGTTTCGAGGTTAAAATT 57.529 25.926 0.00 0.00 37.14 1.82
6832 8303 9.124807 GAATTGATTTCGTTTCGAGGTTAAAAT 57.875 29.630 0.00 0.00 37.14 1.82
6833 8304 8.129840 TGAATTGATTTCGTTTCGAGGTTAAAA 58.870 29.630 0.00 0.00 37.14 1.52
6834 8305 7.588488 GTGAATTGATTTCGTTTCGAGGTTAAA 59.412 33.333 0.00 0.00 37.14 1.52
6835 8306 7.073265 GTGAATTGATTTCGTTTCGAGGTTAA 58.927 34.615 0.00 0.00 37.14 2.01
6836 8307 6.203145 TGTGAATTGATTTCGTTTCGAGGTTA 59.797 34.615 0.00 0.00 37.14 2.85
6837 8308 5.008217 TGTGAATTGATTTCGTTTCGAGGTT 59.992 36.000 0.00 0.00 37.14 3.50
6838 8309 4.513692 TGTGAATTGATTTCGTTTCGAGGT 59.486 37.500 0.00 0.00 37.14 3.85
6839 8310 5.029650 TGTGAATTGATTTCGTTTCGAGG 57.970 39.130 0.00 0.00 37.14 4.63
6840 8311 8.727733 CATTATGTGAATTGATTTCGTTTCGAG 58.272 33.333 0.00 0.00 37.14 4.04
6841 8312 8.447053 TCATTATGTGAATTGATTTCGTTTCGA 58.553 29.630 0.00 0.00 37.13 3.71
6842 8313 8.599876 TCATTATGTGAATTGATTTCGTTTCG 57.400 30.769 0.00 0.00 37.13 3.46
6856 8327 2.746904 CACGGGCAGTTCATTATGTGAA 59.253 45.455 0.00 0.00 44.36 3.18
6857 8328 2.027653 TCACGGGCAGTTCATTATGTGA 60.028 45.455 0.00 0.00 33.14 3.58
6858 8329 2.355197 TCACGGGCAGTTCATTATGTG 58.645 47.619 0.00 0.00 0.00 3.21
6859 8330 2.779755 TCACGGGCAGTTCATTATGT 57.220 45.000 0.00 0.00 0.00 2.29
6860 8331 3.440173 AGTTTCACGGGCAGTTCATTATG 59.560 43.478 0.00 0.00 0.00 1.90
6861 8332 3.686016 AGTTTCACGGGCAGTTCATTAT 58.314 40.909 0.00 0.00 0.00 1.28
6862 8333 3.134574 AGTTTCACGGGCAGTTCATTA 57.865 42.857 0.00 0.00 0.00 1.90
6863 8334 1.981256 AGTTTCACGGGCAGTTCATT 58.019 45.000 0.00 0.00 0.00 2.57
6864 8335 2.851263 TAGTTTCACGGGCAGTTCAT 57.149 45.000 0.00 0.00 0.00 2.57
6865 8336 2.851263 ATAGTTTCACGGGCAGTTCA 57.149 45.000 0.00 0.00 0.00 3.18
6866 8337 3.500680 TGAAATAGTTTCACGGGCAGTTC 59.499 43.478 1.24 0.00 44.21 3.01
6867 8338 3.482436 TGAAATAGTTTCACGGGCAGTT 58.518 40.909 1.24 0.00 44.21 3.16
6868 8339 3.134574 TGAAATAGTTTCACGGGCAGT 57.865 42.857 1.24 0.00 44.21 4.40
6876 8347 4.263331 GGTCAGGGGAGTGAAATAGTTTCA 60.263 45.833 1.24 1.24 46.68 2.69
6877 8348 4.019231 AGGTCAGGGGAGTGAAATAGTTTC 60.019 45.833 0.00 0.00 40.08 2.78
6878 8349 3.916989 AGGTCAGGGGAGTGAAATAGTTT 59.083 43.478 0.00 0.00 0.00 2.66
6879 8350 3.532102 AGGTCAGGGGAGTGAAATAGTT 58.468 45.455 0.00 0.00 0.00 2.24
6880 8351 3.207044 AGGTCAGGGGAGTGAAATAGT 57.793 47.619 0.00 0.00 0.00 2.12
6881 8352 4.576330 AAAGGTCAGGGGAGTGAAATAG 57.424 45.455 0.00 0.00 0.00 1.73
6882 8353 5.074515 AGAAAAAGGTCAGGGGAGTGAAATA 59.925 40.000 0.00 0.00 0.00 1.40
6883 8354 3.903530 AAAAGGTCAGGGGAGTGAAAT 57.096 42.857 0.00 0.00 0.00 2.17
6884 8355 3.204382 AGAAAAAGGTCAGGGGAGTGAAA 59.796 43.478 0.00 0.00 0.00 2.69
6885 8356 2.783510 AGAAAAAGGTCAGGGGAGTGAA 59.216 45.455 0.00 0.00 0.00 3.18
6886 8357 2.106511 CAGAAAAAGGTCAGGGGAGTGA 59.893 50.000 0.00 0.00 0.00 3.41
6887 8358 2.508526 CAGAAAAAGGTCAGGGGAGTG 58.491 52.381 0.00 0.00 0.00 3.51
6888 8359 1.202940 GCAGAAAAAGGTCAGGGGAGT 60.203 52.381 0.00 0.00 0.00 3.85
6889 8360 1.202927 TGCAGAAAAAGGTCAGGGGAG 60.203 52.381 0.00 0.00 0.00 4.30
6890 8361 0.850100 TGCAGAAAAAGGTCAGGGGA 59.150 50.000 0.00 0.00 0.00 4.81
6891 8362 1.251251 CTGCAGAAAAAGGTCAGGGG 58.749 55.000 8.42 0.00 0.00 4.79
6892 8363 0.600057 GCTGCAGAAAAAGGTCAGGG 59.400 55.000 20.43 0.00 0.00 4.45
6893 8364 0.239347 CGCTGCAGAAAAAGGTCAGG 59.761 55.000 20.43 0.00 0.00 3.86
6894 8365 0.386478 GCGCTGCAGAAAAAGGTCAG 60.386 55.000 20.43 0.00 0.00 3.51
6895 8366 1.654220 GCGCTGCAGAAAAAGGTCA 59.346 52.632 20.43 0.00 0.00 4.02
6896 8367 1.081175 GGCGCTGCAGAAAAAGGTC 60.081 57.895 20.43 0.00 0.00 3.85
6897 8368 2.564721 GGGCGCTGCAGAAAAAGGT 61.565 57.895 20.43 0.00 0.00 3.50
6898 8369 2.259511 GGGCGCTGCAGAAAAAGG 59.740 61.111 20.43 0.00 0.00 3.11
6899 8370 2.126734 CGGGCGCTGCAGAAAAAG 60.127 61.111 20.43 3.53 0.00 2.27
6900 8371 4.341502 GCGGGCGCTGCAGAAAAA 62.342 61.111 20.43 0.00 35.55 1.94
6924 8395 4.729856 ACCGTTCGGTGTAGCGCC 62.730 66.667 16.22 0.00 37.10 6.53
6935 8406 3.188786 CTAGGCGCTGCACCGTTC 61.189 66.667 7.64 0.00 0.00 3.95


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.