Multiple sequence alignment - TraesCS5D01G065600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G065600 chr5D 100.000 8169 0 0 1 8169 61041877 61050045 0.000000e+00 15086.0
1 TraesCS5D01G065600 chr5D 95.146 103 4 1 7477 7578 61049251 61049353 2.360000e-35 161.0
2 TraesCS5D01G065600 chr5D 95.146 103 4 1 7375 7477 61049353 61049454 2.360000e-35 161.0
3 TraesCS5D01G065600 chr5D 90.722 97 3 2 3919 4010 373214563 373214658 3.100000e-24 124.0
4 TraesCS5D01G065600 chr5B 96.158 3956 100 16 15 3930 69651186 69647243 0.000000e+00 6416.0
5 TraesCS5D01G065600 chr5B 95.113 3417 131 22 4007 7405 69647244 69643846 0.000000e+00 5352.0
6 TraesCS5D01G065600 chr5B 94.059 101 6 0 7796 7896 69643689 69643589 3.950000e-33 154.0
7 TraesCS5D01G065600 chr5B 89.109 101 7 2 7510 7606 69643866 69643766 1.110000e-23 122.0
8 TraesCS5D01G065600 chr5A 97.895 2375 46 4 1556 3930 51035824 51038194 0.000000e+00 4106.0
9 TraesCS5D01G065600 chr5A 96.463 1951 67 1 4007 5957 51038193 51040141 0.000000e+00 3219.0
10 TraesCS5D01G065600 chr5A 94.997 1439 59 7 5998 7434 51040266 51041693 0.000000e+00 2246.0
11 TraesCS5D01G065600 chr5A 87.274 1218 88 28 1 1182 51034027 51035213 0.000000e+00 1328.0
12 TraesCS5D01G065600 chr5A 93.086 405 15 6 1164 1558 51035235 51035636 1.530000e-161 580.0
13 TraesCS5D01G065600 chr5A 97.927 193 3 1 1486 1678 51035636 51035827 4.720000e-87 333.0
14 TraesCS5D01G065600 chr5A 91.781 146 7 4 8019 8160 51042004 51042148 1.800000e-46 198.0
15 TraesCS5D01G065600 chr5A 95.000 80 4 0 5508 5587 49515376 49515297 8.610000e-25 126.0
16 TraesCS5D01G065600 chr5A 95.000 80 4 0 5508 5587 49957054 49956975 8.610000e-25 126.0
17 TraesCS5D01G065600 chr5A 88.119 101 10 2 7853 7953 51041691 51041789 1.440000e-22 119.0
18 TraesCS5D01G065600 chr7A 96.627 593 18 2 1369 1961 17070467 17071057 0.000000e+00 983.0
19 TraesCS5D01G065600 chr7A 95.122 82 4 0 2012 2093 17071046 17071127 6.650000e-26 130.0
20 TraesCS5D01G065600 chr3D 96.290 593 19 3 1369 1961 599578947 599579536 0.000000e+00 970.0
21 TraesCS5D01G065600 chr7D 91.753 97 2 2 3924 4015 485090873 485090968 6.650000e-26 130.0
22 TraesCS5D01G065600 chr7D 87.273 110 7 3 3908 4012 4643974 4644081 1.440000e-22 119.0
23 TraesCS5D01G065600 chr3B 91.667 96 3 2 3928 4018 125879595 125879690 2.390000e-25 128.0
24 TraesCS5D01G065600 chr6B 89.524 105 3 4 3911 4008 416897306 416897409 8.610000e-25 126.0
25 TraesCS5D01G065600 chr6B 90.000 100 6 4 3928 4026 474440090 474439994 8.610000e-25 126.0
26 TraesCS5D01G065600 chr6D 90.099 101 3 2 3928 4023 146072908 146072810 3.100000e-24 124.0
27 TraesCS5D01G065600 chr6D 95.000 40 2 0 7629 7668 97351856 97351817 6.840000e-06 63.9
28 TraesCS5D01G065600 chr1D 89.899 99 3 3 3921 4017 433912595 433912688 4.000000e-23 121.0
29 TraesCS5D01G065600 chr2A 89.691 97 5 2 3916 4007 572056065 572056161 1.440000e-22 119.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G065600 chr5D 61041877 61050045 8168 False 5136.000 15086 96.76400 1 8169 3 chr5D.!!$F2 8168
1 TraesCS5D01G065600 chr5B 69643589 69651186 7597 True 3011.000 6416 93.60975 15 7896 4 chr5B.!!$R1 7881
2 TraesCS5D01G065600 chr5A 51034027 51042148 8121 False 1516.125 4106 93.44275 1 8160 8 chr5A.!!$F1 8159
3 TraesCS5D01G065600 chr7A 17070467 17071127 660 False 556.500 983 95.87450 1369 2093 2 chr7A.!!$F1 724
4 TraesCS5D01G065600 chr3D 599578947 599579536 589 False 970.000 970 96.29000 1369 1961 1 chr3D.!!$F1 592

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
555 566 0.037605 CGTTTCCCTCTTAGTGCGGT 60.038 55.000 0.00 0.0 0.00 5.68 F
689 700 0.889186 CTACTGCTGGCCGGTTTGTT 60.889 55.000 14.55 0.0 34.16 2.83 F
691 702 1.007387 CTGCTGGCCGGTTTGTTTC 60.007 57.895 14.55 0.0 0.00 2.78 F
968 1003 1.846439 CCCTTAAGGATCCAAGGAGCA 59.154 52.381 25.71 0.0 43.44 4.26 F
2887 3169 1.002430 CTGCAGAGGAACAGTGCCTTA 59.998 52.381 8.42 0.0 38.35 2.69 F
3944 4226 0.042131 TGTTACTCCCTCCGTCCCAT 59.958 55.000 0.00 0.0 0.00 4.00 F
5506 5788 0.737219 GCAGCCAGTGATTGATGTCC 59.263 55.000 0.00 0.0 0.00 4.02 F
6432 6814 0.253327 AAGAAGAAGATCACGGCCCC 59.747 55.000 0.00 0.0 0.00 5.80 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1735 2012 2.148916 ACAGTGTCACATGTGGTACG 57.851 50.000 25.16 19.11 0.00 3.67 R
2077 2359 4.098044 TCCACGTAAATGTTGCAAAAGGAA 59.902 37.500 0.00 0.00 0.00 3.36 R
2353 2635 7.939039 TCATCCAAATCTAACTGGTATTCATCC 59.061 37.037 0.00 0.00 34.11 3.51 R
2904 3186 1.005097 AGCTCCACATGCAAATCCTGA 59.995 47.619 0.00 0.00 0.00 3.86 R
4842 5124 0.031917 TACGGGCCTCCACATCCTTA 60.032 55.000 0.84 0.00 0.00 2.69 R
5730 6012 0.687354 TCAGGTCAACCTTCAGCCTC 59.313 55.000 0.00 0.00 46.09 4.70 R
6706 7088 0.267054 TCAGCTCCTGGAGGATGGAT 59.733 55.000 24.43 0.00 44.46 3.41 R
7606 7996 0.463116 TATTTTCGGGCGGAGGAAGC 60.463 55.000 0.00 0.00 0.00 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
55 56 1.490490 TGGTTGGCTTCTCTTGTCACT 59.510 47.619 0.00 0.00 0.00 3.41
112 117 1.540267 TTTGCGTTGGTGGGATTAGG 58.460 50.000 0.00 0.00 0.00 2.69
125 131 2.700371 GGGATTAGGCCCCATTTTGAAG 59.300 50.000 0.00 0.00 42.62 3.02
189 195 7.523293 TTTAGCCATTCTTGTTTCTTGATGA 57.477 32.000 0.00 0.00 0.00 2.92
266 272 4.823989 CCACTTCTTCCAATCTTGTCTTGT 59.176 41.667 0.00 0.00 0.00 3.16
269 275 6.708054 CACTTCTTCCAATCTTGTCTTGTAGT 59.292 38.462 0.00 0.00 0.00 2.73
305 311 1.870064 ATCCATGCCCCCTTTTCTTG 58.130 50.000 0.00 0.00 0.00 3.02
367 378 5.655532 ACAAGCTGCTAGAATCCATGAAAAT 59.344 36.000 0.90 0.00 0.00 1.82
496 507 2.821378 TGATGCCCTCTGTTTTGTCATG 59.179 45.455 0.00 0.00 0.00 3.07
549 560 3.877508 CCTTAATGGCGTTTCCCTCTTAG 59.122 47.826 0.00 0.00 0.00 2.18
553 564 1.359459 GGCGTTTCCCTCTTAGTGCG 61.359 60.000 0.00 0.00 0.00 5.34
555 566 0.037605 CGTTTCCCTCTTAGTGCGGT 60.038 55.000 0.00 0.00 0.00 5.68
608 619 2.747446 GGCCGTTTCAGAAAGATGCTAA 59.253 45.455 0.00 0.00 0.00 3.09
652 663 4.690122 CCTTACCGTTTACCCAGTCATAG 58.310 47.826 0.00 0.00 0.00 2.23
668 679 3.972502 GTCATAGTTTTTGACCGTTGTGC 59.027 43.478 0.00 0.00 38.00 4.57
685 696 4.760047 CGCTACTGCTGGCCGGTT 62.760 66.667 14.55 0.16 36.97 4.44
687 698 2.690778 GCTACTGCTGGCCGGTTTG 61.691 63.158 14.55 6.25 34.16 2.93
688 699 1.302511 CTACTGCTGGCCGGTTTGT 60.303 57.895 14.55 11.93 34.16 2.83
689 700 0.889186 CTACTGCTGGCCGGTTTGTT 60.889 55.000 14.55 0.00 34.16 2.83
691 702 1.007387 CTGCTGGCCGGTTTGTTTC 60.007 57.895 14.55 0.00 0.00 2.78
692 703 2.050442 GCTGGCCGGTTTGTTTCG 60.050 61.111 14.55 0.00 0.00 3.46
721 737 9.906660 GATGTCTATATATAGCAGAATACAGCC 57.093 37.037 14.03 5.94 0.00 4.85
722 738 8.823220 TGTCTATATATAGCAGAATACAGCCA 57.177 34.615 14.03 0.00 0.00 4.75
725 741 2.938956 ATAGCAGAATACAGCCACCC 57.061 50.000 0.00 0.00 0.00 4.61
858 893 7.119709 TCTGCATATAAGGCACTAACTAACA 57.880 36.000 0.00 0.00 38.49 2.41
944 979 3.603770 GGTCGATTTGAATTTCGCAACAG 59.396 43.478 0.00 0.00 35.39 3.16
968 1003 1.846439 CCCTTAAGGATCCAAGGAGCA 59.154 52.381 25.71 0.00 43.44 4.26
1083 1118 3.118261 GCCATATCAGTCCCAAGAACTCA 60.118 47.826 0.00 0.00 0.00 3.41
1123 1158 3.244911 CCTCTCAGGTAAACATGTTGGGT 60.245 47.826 12.82 0.00 0.00 4.51
1128 1163 3.253188 CAGGTAAACATGTTGGGTCACTG 59.747 47.826 12.82 10.88 0.00 3.66
1646 1923 3.126001 TGACCTGTCAACAATCTGGAC 57.874 47.619 0.00 0.00 36.53 4.02
1735 2012 8.706492 TTTTCAACAATGGATATTTGATGCTC 57.294 30.769 0.00 0.00 0.00 4.26
1970 2252 9.699703 ACATTGTTAGTTTACTGTTTTGTTTGT 57.300 25.926 0.00 0.00 0.00 2.83
1982 2264 7.651808 ACTGTTTTGTTTGTGGAGAATAGATG 58.348 34.615 0.00 0.00 0.00 2.90
2353 2635 2.660189 AAATGGCAGAAGCATTTCCG 57.340 45.000 0.00 0.00 44.61 4.30
2528 2810 8.671921 ACTCACTTCTTTTGTAGATGCAATATG 58.328 33.333 0.00 0.00 32.63 1.78
2745 3027 1.483424 GATCCGAGAAAGAAGCCGCG 61.483 60.000 0.00 0.00 0.00 6.46
2887 3169 1.002430 CTGCAGAGGAACAGTGCCTTA 59.998 52.381 8.42 0.00 38.35 2.69
2904 3186 3.497584 GCCTTATGCTTGAGAGGGCTAAT 60.498 47.826 0.00 0.00 36.87 1.73
2979 3261 6.093771 AGCATGAAGAGCTTAATGAGAAACAG 59.906 38.462 11.02 0.00 39.87 3.16
3243 3525 4.215613 CACTCCTCGACATCCGTGATAATA 59.784 45.833 0.00 0.00 39.75 0.98
3508 3790 6.183810 AGACTATCAAGAATCATGATGGCA 57.816 37.500 9.46 0.00 38.81 4.92
3552 3834 0.978907 TGATGCAGCTGGAGAGAACA 59.021 50.000 17.12 2.85 0.00 3.18
3916 4198 5.655394 AGGAGGTACAATGCCTGATATCTA 58.345 41.667 3.98 0.00 36.29 1.98
3938 4220 7.325694 TCTATTTTACTTTGTTACTCCCTCCG 58.674 38.462 0.00 0.00 0.00 4.63
3939 4221 4.961438 TTTACTTTGTTACTCCCTCCGT 57.039 40.909 0.00 0.00 0.00 4.69
3940 4222 4.525912 TTACTTTGTTACTCCCTCCGTC 57.474 45.455 0.00 0.00 0.00 4.79
3941 4223 1.622312 ACTTTGTTACTCCCTCCGTCC 59.378 52.381 0.00 0.00 0.00 4.79
3942 4224 0.978907 TTTGTTACTCCCTCCGTCCC 59.021 55.000 0.00 0.00 0.00 4.46
3943 4225 0.178926 TTGTTACTCCCTCCGTCCCA 60.179 55.000 0.00 0.00 0.00 4.37
3944 4226 0.042131 TGTTACTCCCTCCGTCCCAT 59.958 55.000 0.00 0.00 0.00 4.00
3945 4227 1.288633 TGTTACTCCCTCCGTCCCATA 59.711 52.381 0.00 0.00 0.00 2.74
3946 4228 2.292389 TGTTACTCCCTCCGTCCCATAA 60.292 50.000 0.00 0.00 0.00 1.90
3947 4229 2.970640 GTTACTCCCTCCGTCCCATAAT 59.029 50.000 0.00 0.00 0.00 1.28
3948 4230 4.154942 GTTACTCCCTCCGTCCCATAATA 58.845 47.826 0.00 0.00 0.00 0.98
3949 4231 3.562108 ACTCCCTCCGTCCCATAATAT 57.438 47.619 0.00 0.00 0.00 1.28
3950 4232 4.687262 ACTCCCTCCGTCCCATAATATA 57.313 45.455 0.00 0.00 0.00 0.86
3951 4233 5.019657 ACTCCCTCCGTCCCATAATATAA 57.980 43.478 0.00 0.00 0.00 0.98
3952 4234 5.024118 ACTCCCTCCGTCCCATAATATAAG 58.976 45.833 0.00 0.00 0.00 1.73
3953 4235 5.222484 ACTCCCTCCGTCCCATAATATAAGA 60.222 44.000 0.00 0.00 0.00 2.10
3954 4236 5.269991 TCCCTCCGTCCCATAATATAAGAG 58.730 45.833 0.00 0.00 0.00 2.85
3955 4237 5.024118 CCCTCCGTCCCATAATATAAGAGT 58.976 45.833 0.00 0.00 0.00 3.24
3956 4238 5.105310 CCCTCCGTCCCATAATATAAGAGTG 60.105 48.000 0.00 0.00 0.00 3.51
3957 4239 5.480772 CCTCCGTCCCATAATATAAGAGTGT 59.519 44.000 0.00 0.00 0.00 3.55
3958 4240 6.014499 CCTCCGTCCCATAATATAAGAGTGTT 60.014 42.308 0.00 0.00 0.00 3.32
3959 4241 7.369551 TCCGTCCCATAATATAAGAGTGTTT 57.630 36.000 0.00 0.00 0.00 2.83
3960 4242 7.798071 TCCGTCCCATAATATAAGAGTGTTTT 58.202 34.615 0.00 0.00 0.00 2.43
3961 4243 8.269317 TCCGTCCCATAATATAAGAGTGTTTTT 58.731 33.333 0.00 0.00 0.00 1.94
3962 4244 8.342634 CCGTCCCATAATATAAGAGTGTTTTTG 58.657 37.037 0.00 0.00 0.00 2.44
3963 4245 9.104965 CGTCCCATAATATAAGAGTGTTTTTGA 57.895 33.333 0.00 0.00 0.00 2.69
3965 4247 9.967451 TCCCATAATATAAGAGTGTTTTTGACA 57.033 29.630 0.00 0.00 35.42 3.58
3999 4281 8.446599 AAAAACACTCTTATATTATGGGACGG 57.553 34.615 0.00 0.00 0.00 4.79
4000 4282 6.989155 AACACTCTTATATTATGGGACGGA 57.011 37.500 0.00 0.00 0.00 4.69
4001 4283 6.591750 ACACTCTTATATTATGGGACGGAG 57.408 41.667 0.00 0.00 0.00 4.63
4002 4284 5.480772 ACACTCTTATATTATGGGACGGAGG 59.519 44.000 0.00 0.00 0.00 4.30
4003 4285 5.024118 ACTCTTATATTATGGGACGGAGGG 58.976 45.833 0.00 0.00 0.00 4.30
4004 4286 5.222484 ACTCTTATATTATGGGACGGAGGGA 60.222 44.000 0.00 0.00 0.00 4.20
4005 4287 5.269991 TCTTATATTATGGGACGGAGGGAG 58.730 45.833 0.00 0.00 0.00 4.30
4240 4522 2.158608 AGGCTAGAGAGAGAGAAGAGCC 60.159 54.545 1.71 1.71 46.79 4.70
4260 4542 2.304180 CCAAGAACTCACCCACTCAGAT 59.696 50.000 0.00 0.00 0.00 2.90
4341 4623 5.435291 CATAAGGAGAACCAGCTTCAAGAT 58.565 41.667 0.00 0.00 38.94 2.40
4507 4789 2.163412 TGTTTGACACAGAACAACCAGC 59.837 45.455 0.00 0.00 33.19 4.85
4567 4849 8.723942 ACTACAGTTTGATGAGAAATATGGAC 57.276 34.615 0.00 0.00 0.00 4.02
4887 5169 3.428589 GCAAAGTGGATGAGATGAAAGCC 60.429 47.826 0.00 0.00 0.00 4.35
4929 5211 2.103771 ACAACTCTCAGAGCTGCAAGAA 59.896 45.455 4.90 0.00 29.84 2.52
4942 5224 1.089920 GCAAGAATCACGCCAGTCAT 58.910 50.000 0.00 0.00 0.00 3.06
4965 5247 5.998454 TGCAAGCTGAGATTATTAAGCTC 57.002 39.130 13.50 13.50 45.04 4.09
4983 5265 3.882888 AGCTCATAGAAGAGAACTCCTCG 59.117 47.826 0.00 0.00 46.49 4.63
4985 5267 3.621558 TCATAGAAGAGAACTCCTCGCA 58.378 45.455 0.00 0.00 46.49 5.10
5184 5466 3.063180 CAGGCAACGAGCTTTATCAAGAG 59.937 47.826 0.00 0.00 44.79 2.85
5190 5472 5.843673 ACGAGCTTTATCAAGAGATCAGA 57.156 39.130 0.00 0.00 35.67 3.27
5424 5706 6.258507 ACAATGCTGGTCTTGAAAAATCAAAC 59.741 34.615 0.00 0.00 0.00 2.93
5427 5709 4.676924 GCTGGTCTTGAAAAATCAAACGAG 59.323 41.667 0.00 0.00 0.00 4.18
5485 5767 4.916983 ATGCAACTGCTTAAGAACAACA 57.083 36.364 6.67 0.00 42.66 3.33
5506 5788 0.737219 GCAGCCAGTGATTGATGTCC 59.263 55.000 0.00 0.00 0.00 4.02
5541 5823 1.260033 GAGATCTCGAAATTGCTGGCG 59.740 52.381 7.04 0.00 0.00 5.69
5625 5907 2.126467 GCATGCGAGAGTTCTGAGATC 58.874 52.381 0.00 0.00 0.00 2.75
5730 6012 3.405831 TGCTGTTGAGATTGAGAACAGG 58.594 45.455 11.84 0.00 44.46 4.00
5742 6024 1.349357 GAGAACAGGAGGCTGAAGGTT 59.651 52.381 0.00 0.00 0.00 3.50
5804 6086 1.768275 TGAAGTCAGTGCCTTGGAGAA 59.232 47.619 0.00 0.00 0.00 2.87
5900 6185 7.513371 TTTATCCGTACCATGTTCTTTTTGT 57.487 32.000 0.00 0.00 0.00 2.83
5912 6197 7.310609 CCATGTTCTTTTTGTATCTTCCCCATT 60.311 37.037 0.00 0.00 0.00 3.16
5919 6204 9.586435 CTTTTTGTATCTTCCCCATTTGTATTC 57.414 33.333 0.00 0.00 0.00 1.75
5921 6206 7.639113 TTGTATCTTCCCCATTTGTATTCAC 57.361 36.000 0.00 0.00 0.00 3.18
5942 6227 4.072131 ACGTTGAAGTATGATGCCAGTTT 58.928 39.130 0.00 0.00 0.00 2.66
5957 6242 7.652909 TGATGCCAGTTTATTCAACTCTTTTTG 59.347 33.333 0.00 0.00 44.60 2.44
5958 6243 5.752955 TGCCAGTTTATTCAACTCTTTTTGC 59.247 36.000 0.00 0.00 44.60 3.68
5960 6245 7.145323 GCCAGTTTATTCAACTCTTTTTGCTA 58.855 34.615 0.00 0.00 44.60 3.49
5961 6246 7.327032 GCCAGTTTATTCAACTCTTTTTGCTAG 59.673 37.037 0.00 0.00 44.60 3.42
5962 6247 8.567948 CCAGTTTATTCAACTCTTTTTGCTAGA 58.432 33.333 0.00 0.00 44.60 2.43
5963 6248 9.387123 CAGTTTATTCAACTCTTTTTGCTAGAC 57.613 33.333 0.00 0.00 44.60 2.59
5964 6249 8.283291 AGTTTATTCAACTCTTTTTGCTAGACG 58.717 33.333 0.00 0.00 42.62 4.18
5966 6251 6.619801 ATTCAACTCTTTTTGCTAGACGTT 57.380 33.333 0.00 0.00 0.00 3.99
5967 6252 6.431198 TTCAACTCTTTTTGCTAGACGTTT 57.569 33.333 0.00 0.00 0.00 3.60
5968 6253 6.431198 TCAACTCTTTTTGCTAGACGTTTT 57.569 33.333 0.00 0.00 0.00 2.43
6060 6441 5.955961 TCACTCATATGGGTCTCATTTCA 57.044 39.130 4.88 0.00 37.30 2.69
6172 6554 1.273759 AAGACATGGAGCTGCAGAGA 58.726 50.000 20.43 0.00 0.00 3.10
6341 6723 0.453950 GAGCGACGCAAACTACGAGA 60.454 55.000 23.70 0.00 0.00 4.04
6343 6725 0.453950 GCGACGCAAACTACGAGAGA 60.454 55.000 16.42 0.00 0.00 3.10
6427 6809 1.923204 CGCCTCAAGAAGAAGATCACG 59.077 52.381 0.00 0.00 0.00 4.35
6432 6814 0.253327 AAGAAGAAGATCACGGCCCC 59.747 55.000 0.00 0.00 0.00 5.80
6706 7088 3.003173 CGGCTCAGGGACCTCCAA 61.003 66.667 0.00 0.00 38.24 3.53
6823 7205 1.086067 CGCAGCTCATCGACACCAAT 61.086 55.000 0.00 0.00 0.00 3.16
7398 7785 6.628919 ACAGCGGTAAACTGTTAATCTTTT 57.371 33.333 0.00 0.00 46.01 2.27
7399 7786 6.435428 ACAGCGGTAAACTGTTAATCTTTTG 58.565 36.000 0.00 0.00 46.01 2.44
7400 7787 6.038936 ACAGCGGTAAACTGTTAATCTTTTGT 59.961 34.615 0.00 0.00 46.01 2.83
7401 7788 6.577427 CAGCGGTAAACTGTTAATCTTTTGTC 59.423 38.462 0.00 0.00 0.00 3.18
7402 7789 5.562623 GCGGTAAACTGTTAATCTTTTGTCG 59.437 40.000 0.00 0.00 0.00 4.35
7403 7790 6.652245 CGGTAAACTGTTAATCTTTTGTCGT 58.348 36.000 0.00 0.00 0.00 4.34
7404 7791 7.569226 GCGGTAAACTGTTAATCTTTTGTCGTA 60.569 37.037 0.00 0.00 0.00 3.43
7405 7792 8.437742 CGGTAAACTGTTAATCTTTTGTCGTAT 58.562 33.333 0.00 0.00 0.00 3.06
7424 7811 9.195411 TGTCGTATAAACTGTTAAATCTTTCGT 57.805 29.630 0.00 0.00 0.00 3.85
7425 7812 9.667500 GTCGTATAAACTGTTAAATCTTTCGTC 57.332 33.333 0.00 0.00 0.00 4.20
7426 7813 8.577939 TCGTATAAACTGTTAAATCTTTCGTCG 58.422 33.333 0.00 0.00 0.00 5.12
7427 7814 8.368126 CGTATAAACTGTTAAATCTTTCGTCGT 58.632 33.333 0.00 0.00 0.00 4.34
7432 7819 9.940166 AAACTGTTAAATCTTTCGTCGTAATTT 57.060 25.926 0.00 0.00 0.00 1.82
7433 7820 9.940166 AACTGTTAAATCTTTCGTCGTAATTTT 57.060 25.926 0.00 0.00 0.00 1.82
7434 7821 9.377383 ACTGTTAAATCTTTCGTCGTAATTTTG 57.623 29.630 0.00 0.00 0.00 2.44
7435 7822 9.377383 CTGTTAAATCTTTCGTCGTAATTTTGT 57.623 29.630 0.00 0.00 0.00 2.83
7436 7823 9.719279 TGTTAAATCTTTCGTCGTAATTTTGTT 57.281 25.926 0.00 0.00 0.00 2.83
7438 7825 7.529357 AAATCTTTCGTCGTAATTTTGTTCG 57.471 32.000 0.00 0.00 0.00 3.95
7439 7826 4.448005 TCTTTCGTCGTAATTTTGTTCGC 58.552 39.130 0.00 0.00 0.00 4.70
7440 7827 4.209703 TCTTTCGTCGTAATTTTGTTCGCT 59.790 37.500 0.00 0.00 0.00 4.93
7441 7828 3.693300 TCGTCGTAATTTTGTTCGCTC 57.307 42.857 0.00 0.00 0.00 5.03
7442 7829 3.051327 TCGTCGTAATTTTGTTCGCTCA 58.949 40.909 0.00 0.00 0.00 4.26
7443 7830 3.676172 TCGTCGTAATTTTGTTCGCTCAT 59.324 39.130 0.00 0.00 0.00 2.90
7444 7831 3.773549 CGTCGTAATTTTGTTCGCTCATG 59.226 43.478 0.00 0.00 0.00 3.07
7445 7832 4.665645 CGTCGTAATTTTGTTCGCTCATGT 60.666 41.667 0.00 0.00 0.00 3.21
7446 7833 5.443562 CGTCGTAATTTTGTTCGCTCATGTA 60.444 40.000 0.00 0.00 0.00 2.29
7447 7834 5.726679 GTCGTAATTTTGTTCGCTCATGTAC 59.273 40.000 0.00 0.00 0.00 2.90
7448 7835 5.405873 TCGTAATTTTGTTCGCTCATGTACA 59.594 36.000 0.00 0.00 0.00 2.90
7449 7836 6.073711 TCGTAATTTTGTTCGCTCATGTACAA 60.074 34.615 0.00 0.00 0.00 2.41
7450 7837 6.740905 CGTAATTTTGTTCGCTCATGTACAAT 59.259 34.615 0.00 0.00 31.30 2.71
7451 7838 7.270365 CGTAATTTTGTTCGCTCATGTACAATT 59.730 33.333 0.00 0.00 31.30 2.32
7452 7839 9.549509 GTAATTTTGTTCGCTCATGTACAATTA 57.450 29.630 0.00 0.00 31.30 1.40
7454 7841 8.619146 ATTTTGTTCGCTCATGTACAATTATG 57.381 30.769 0.00 0.00 31.30 1.90
7455 7842 6.976636 TTGTTCGCTCATGTACAATTATGA 57.023 33.333 0.00 0.00 32.75 2.15
7456 7843 7.552458 TTGTTCGCTCATGTACAATTATGAT 57.448 32.000 0.00 0.00 33.25 2.45
7457 7844 6.947258 TGTTCGCTCATGTACAATTATGATG 58.053 36.000 0.00 0.00 33.25 3.07
7458 7845 5.596268 TCGCTCATGTACAATTATGATGC 57.404 39.130 0.00 4.45 33.25 3.91
7459 7846 5.299949 TCGCTCATGTACAATTATGATGCT 58.700 37.500 0.00 0.00 33.25 3.79
7460 7847 5.178067 TCGCTCATGTACAATTATGATGCTG 59.822 40.000 0.00 3.05 33.25 4.41
7461 7848 5.049886 CGCTCATGTACAATTATGATGCTGT 60.050 40.000 0.00 0.00 33.25 4.40
7462 7849 6.512253 CGCTCATGTACAATTATGATGCTGTT 60.512 38.462 0.00 0.00 33.25 3.16
7463 7850 7.198390 GCTCATGTACAATTATGATGCTGTTT 58.802 34.615 0.00 0.00 33.25 2.83
7464 7851 7.703621 GCTCATGTACAATTATGATGCTGTTTT 59.296 33.333 0.00 0.00 33.25 2.43
7465 7852 9.577110 CTCATGTACAATTATGATGCTGTTTTT 57.423 29.630 0.00 0.00 33.25 1.94
7466 7853 9.571810 TCATGTACAATTATGATGCTGTTTTTC 57.428 29.630 0.00 0.00 0.00 2.29
7467 7854 9.356433 CATGTACAATTATGATGCTGTTTTTCA 57.644 29.630 0.00 0.00 0.00 2.69
7469 7856 9.926158 TGTACAATTATGATGCTGTTTTTCATT 57.074 25.926 0.00 0.00 32.58 2.57
7471 7858 8.483307 ACAATTATGATGCTGTTTTTCATTCC 57.517 30.769 0.00 0.00 32.58 3.01
7472 7859 7.550196 ACAATTATGATGCTGTTTTTCATTCCC 59.450 33.333 0.00 0.00 32.58 3.97
7473 7860 3.574284 TGATGCTGTTTTTCATTCCCG 57.426 42.857 0.00 0.00 0.00 5.14
7474 7861 2.890311 TGATGCTGTTTTTCATTCCCGT 59.110 40.909 0.00 0.00 0.00 5.28
7475 7862 3.320541 TGATGCTGTTTTTCATTCCCGTT 59.679 39.130 0.00 0.00 0.00 4.44
7476 7863 3.090952 TGCTGTTTTTCATTCCCGTTG 57.909 42.857 0.00 0.00 0.00 4.10
7477 7864 2.690497 TGCTGTTTTTCATTCCCGTTGA 59.310 40.909 0.00 0.00 0.00 3.18
7478 7865 3.049912 GCTGTTTTTCATTCCCGTTGAC 58.950 45.455 0.00 0.00 0.00 3.18
7479 7866 3.490078 GCTGTTTTTCATTCCCGTTGACA 60.490 43.478 0.00 0.00 0.00 3.58
7480 7867 4.290155 CTGTTTTTCATTCCCGTTGACAG 58.710 43.478 0.00 0.00 0.00 3.51
7481 7868 3.948473 TGTTTTTCATTCCCGTTGACAGA 59.052 39.130 0.00 0.00 0.00 3.41
7482 7869 4.036262 TGTTTTTCATTCCCGTTGACAGAG 59.964 41.667 0.00 0.00 0.00 3.35
7483 7870 2.472695 TTCATTCCCGTTGACAGAGG 57.527 50.000 0.00 0.00 0.00 3.69
7484 7871 1.348064 TCATTCCCGTTGACAGAGGT 58.652 50.000 0.00 0.00 0.00 3.85
7485 7872 2.531771 TCATTCCCGTTGACAGAGGTA 58.468 47.619 0.00 0.00 0.00 3.08
7486 7873 2.901192 TCATTCCCGTTGACAGAGGTAA 59.099 45.455 0.00 0.00 0.00 2.85
7487 7874 3.325425 TCATTCCCGTTGACAGAGGTAAA 59.675 43.478 0.00 0.00 0.00 2.01
7488 7875 2.825861 TCCCGTTGACAGAGGTAAAC 57.174 50.000 0.00 0.00 35.36 2.01
7489 7876 2.322658 TCCCGTTGACAGAGGTAAACT 58.677 47.619 0.00 0.00 36.39 2.66
7490 7877 2.036733 TCCCGTTGACAGAGGTAAACTG 59.963 50.000 0.00 0.00 36.39 3.16
7492 7879 3.463944 CCGTTGACAGAGGTAAACTGTT 58.536 45.455 0.00 0.00 46.57 3.16
7500 7887 8.378172 TGACAGAGGTAAACTGTTAATCTTTG 57.622 34.615 0.00 0.56 46.57 2.77
7503 7890 7.444487 ACAGAGGTAAACTGTTAATCTTTGGTC 59.556 37.037 0.00 0.00 44.69 4.02
7508 7895 8.173130 GGTAAACTGTTAATCTTTGGTCGTATG 58.827 37.037 0.00 0.00 0.00 2.39
7538 7925 9.372541 TGTTAATCTTTCGTCGTAATTTTGTTC 57.627 29.630 0.00 0.00 0.00 3.18
7539 7926 8.553400 GTTAATCTTTCGTCGTAATTTTGTTCG 58.447 33.333 0.00 0.00 0.00 3.95
7570 7960 8.143193 TGTACAATTCTGATGCTGTTTTTCATT 58.857 29.630 0.00 0.00 0.00 2.57
7572 7962 6.647895 ACAATTCTGATGCTGTTTTTCATTCC 59.352 34.615 0.00 0.00 0.00 3.01
7582 7972 3.447586 TGTTTTTCATTCCCGTTGGTTGA 59.552 39.130 0.00 0.00 0.00 3.18
7585 7975 2.122783 TCATTCCCGTTGGTTGATCC 57.877 50.000 0.00 0.00 0.00 3.36
7586 7976 1.352687 TCATTCCCGTTGGTTGATCCA 59.647 47.619 0.00 0.00 45.60 3.41
7599 7989 4.761739 TGGTTGATCCAGTTCATGTTCTTC 59.238 41.667 0.00 0.00 41.93 2.87
7600 7990 4.142816 GGTTGATCCAGTTCATGTTCTTCG 60.143 45.833 0.00 0.00 35.97 3.79
7602 7992 3.007940 TGATCCAGTTCATGTTCTTCGGT 59.992 43.478 0.00 0.00 0.00 4.69
7603 7993 3.485463 TCCAGTTCATGTTCTTCGGTT 57.515 42.857 0.00 0.00 0.00 4.44
7604 7994 4.610605 TCCAGTTCATGTTCTTCGGTTA 57.389 40.909 0.00 0.00 0.00 2.85
7605 7995 5.160607 TCCAGTTCATGTTCTTCGGTTAT 57.839 39.130 0.00 0.00 0.00 1.89
7606 7996 4.935205 TCCAGTTCATGTTCTTCGGTTATG 59.065 41.667 0.00 0.00 0.00 1.90
7607 7997 4.437390 CCAGTTCATGTTCTTCGGTTATGC 60.437 45.833 0.00 0.00 0.00 3.14
7608 7998 4.393062 CAGTTCATGTTCTTCGGTTATGCT 59.607 41.667 0.00 0.00 0.00 3.79
7609 7999 5.003804 AGTTCATGTTCTTCGGTTATGCTT 58.996 37.500 0.00 0.00 0.00 3.91
7610 8000 5.122396 AGTTCATGTTCTTCGGTTATGCTTC 59.878 40.000 0.00 0.00 0.00 3.86
7611 8001 3.938963 TCATGTTCTTCGGTTATGCTTCC 59.061 43.478 0.00 0.00 0.00 3.46
7612 8002 3.695830 TGTTCTTCGGTTATGCTTCCT 57.304 42.857 0.00 0.00 0.00 3.36
7613 8003 3.596214 TGTTCTTCGGTTATGCTTCCTC 58.404 45.455 0.00 0.00 0.00 3.71
7614 8004 2.937149 GTTCTTCGGTTATGCTTCCTCC 59.063 50.000 0.00 0.00 0.00 4.30
7615 8005 1.136305 TCTTCGGTTATGCTTCCTCCG 59.864 52.381 0.00 0.00 42.12 4.63
7616 8006 0.461339 TTCGGTTATGCTTCCTCCGC 60.461 55.000 0.00 0.00 40.81 5.54
7617 8007 1.887707 CGGTTATGCTTCCTCCGCC 60.888 63.158 0.00 0.00 35.01 6.13
7618 8008 1.526225 GGTTATGCTTCCTCCGCCC 60.526 63.158 0.00 0.00 0.00 6.13
7619 8009 1.887707 GTTATGCTTCCTCCGCCCG 60.888 63.158 0.00 0.00 0.00 6.13
7620 8010 2.061578 TTATGCTTCCTCCGCCCGA 61.062 57.895 0.00 0.00 0.00 5.14
7622 8012 1.618876 TATGCTTCCTCCGCCCGAAA 61.619 55.000 0.00 0.00 0.00 3.46
7623 8013 2.359478 GCTTCCTCCGCCCGAAAA 60.359 61.111 0.00 0.00 0.00 2.29
7626 8016 2.015081 GCTTCCTCCGCCCGAAAATAA 61.015 52.381 0.00 0.00 0.00 1.40
7627 8017 1.940613 CTTCCTCCGCCCGAAAATAAG 59.059 52.381 0.00 0.00 0.00 1.73
7628 8018 0.906775 TCCTCCGCCCGAAAATAAGT 59.093 50.000 0.00 0.00 0.00 2.24
7629 8019 1.014352 CCTCCGCCCGAAAATAAGTG 58.986 55.000 0.00 0.00 0.00 3.16
7631 8021 2.081462 CTCCGCCCGAAAATAAGTGTT 58.919 47.619 0.00 0.00 0.00 3.32
7632 8022 1.807742 TCCGCCCGAAAATAAGTGTTG 59.192 47.619 0.00 0.00 0.00 3.33
7636 8026 2.227865 GCCCGAAAATAAGTGTTGCTGA 59.772 45.455 0.00 0.00 0.00 4.26
7637 8027 3.119495 GCCCGAAAATAAGTGTTGCTGAT 60.119 43.478 0.00 0.00 0.00 2.90
7638 8028 4.618227 GCCCGAAAATAAGTGTTGCTGATT 60.618 41.667 0.00 0.00 29.37 2.57
7639 8029 5.469479 CCCGAAAATAAGTGTTGCTGATTT 58.531 37.500 0.00 0.00 39.41 2.17
7640 8030 6.616947 CCCGAAAATAAGTGTTGCTGATTTA 58.383 36.000 0.00 0.00 37.29 1.40
7641 8031 6.747280 CCCGAAAATAAGTGTTGCTGATTTAG 59.253 38.462 0.00 0.00 37.29 1.85
7642 8032 7.305474 CCGAAAATAAGTGTTGCTGATTTAGT 58.695 34.615 0.00 0.00 37.29 2.24
7643 8033 8.447833 CCGAAAATAAGTGTTGCTGATTTAGTA 58.552 33.333 0.00 0.00 37.29 1.82
7644 8034 9.988350 CGAAAATAAGTGTTGCTGATTTAGTAT 57.012 29.630 0.00 0.00 37.29 2.12
7652 8042 9.284968 AGTGTTGCTGATTTAGTATAACTTTGT 57.715 29.630 0.00 0.00 0.00 2.83
7669 8059 6.795098 ACTTTGTATTAAATCAGCGACACA 57.205 33.333 0.00 0.00 0.00 3.72
7670 8060 6.599437 ACTTTGTATTAAATCAGCGACACAC 58.401 36.000 0.00 0.00 0.00 3.82
7671 8061 6.203915 ACTTTGTATTAAATCAGCGACACACA 59.796 34.615 0.00 0.00 0.00 3.72
7672 8062 6.735678 TTGTATTAAATCAGCGACACACAT 57.264 33.333 0.00 0.00 0.00 3.21
7673 8063 6.105657 TGTATTAAATCAGCGACACACATG 57.894 37.500 0.00 0.00 0.00 3.21
7674 8064 5.641636 TGTATTAAATCAGCGACACACATGT 59.358 36.000 0.00 0.00 43.71 3.21
7675 8065 5.627499 ATTAAATCAGCGACACACATGTT 57.373 34.783 0.00 0.00 39.95 2.71
7676 8066 3.988379 AAATCAGCGACACACATGTTT 57.012 38.095 0.00 0.00 39.95 2.83
7677 8067 3.988379 AATCAGCGACACACATGTTTT 57.012 38.095 0.00 0.00 39.95 2.43
7678 8068 2.753989 TCAGCGACACACATGTTTTG 57.246 45.000 0.00 0.00 39.95 2.44
7679 8069 2.284190 TCAGCGACACACATGTTTTGA 58.716 42.857 10.58 0.00 39.95 2.69
7680 8070 2.287644 TCAGCGACACACATGTTTTGAG 59.712 45.455 10.58 5.90 39.95 3.02
7681 8071 2.287644 CAGCGACACACATGTTTTGAGA 59.712 45.455 10.58 0.00 39.95 3.27
7682 8072 3.058708 CAGCGACACACATGTTTTGAGAT 60.059 43.478 10.58 1.65 39.95 2.75
7683 8073 3.058708 AGCGACACACATGTTTTGAGATG 60.059 43.478 10.58 0.00 39.95 2.90
7684 8074 3.813800 CGACACACATGTTTTGAGATGG 58.186 45.455 10.58 0.00 39.95 3.51
7685 8075 3.498018 CGACACACATGTTTTGAGATGGA 59.502 43.478 10.58 0.00 39.95 3.41
7686 8076 4.377738 CGACACACATGTTTTGAGATGGAG 60.378 45.833 10.58 0.00 39.95 3.86
7687 8077 3.822735 ACACACATGTTTTGAGATGGAGG 59.177 43.478 10.58 0.00 34.46 4.30
7688 8078 3.192001 CACACATGTTTTGAGATGGAGGG 59.808 47.826 0.00 0.00 0.00 4.30
7689 8079 3.074390 ACACATGTTTTGAGATGGAGGGA 59.926 43.478 0.00 0.00 0.00 4.20
7690 8080 3.693085 CACATGTTTTGAGATGGAGGGAG 59.307 47.826 0.00 0.00 0.00 4.30
7691 8081 3.331889 ACATGTTTTGAGATGGAGGGAGT 59.668 43.478 0.00 0.00 0.00 3.85
7692 8082 4.536090 ACATGTTTTGAGATGGAGGGAGTA 59.464 41.667 0.00 0.00 0.00 2.59
7693 8083 4.826274 TGTTTTGAGATGGAGGGAGTAG 57.174 45.455 0.00 0.00 0.00 2.57
7694 8084 4.168101 TGTTTTGAGATGGAGGGAGTAGT 58.832 43.478 0.00 0.00 0.00 2.73
7695 8085 5.338632 TGTTTTGAGATGGAGGGAGTAGTA 58.661 41.667 0.00 0.00 0.00 1.82
7696 8086 5.964477 TGTTTTGAGATGGAGGGAGTAGTAT 59.036 40.000 0.00 0.00 0.00 2.12
7697 8087 6.127054 TGTTTTGAGATGGAGGGAGTAGTATG 60.127 42.308 0.00 0.00 0.00 2.39
7698 8088 5.403558 TTGAGATGGAGGGAGTAGTATGA 57.596 43.478 0.00 0.00 0.00 2.15
7699 8089 5.403558 TGAGATGGAGGGAGTAGTATGAA 57.596 43.478 0.00 0.00 0.00 2.57
7700 8090 5.970289 TGAGATGGAGGGAGTAGTATGAAT 58.030 41.667 0.00 0.00 0.00 2.57
7701 8091 5.777223 TGAGATGGAGGGAGTAGTATGAATG 59.223 44.000 0.00 0.00 0.00 2.67
7702 8092 5.970289 AGATGGAGGGAGTAGTATGAATGA 58.030 41.667 0.00 0.00 0.00 2.57
7703 8093 6.385443 AGATGGAGGGAGTAGTATGAATGAA 58.615 40.000 0.00 0.00 0.00 2.57
7704 8094 7.021873 AGATGGAGGGAGTAGTATGAATGAAT 58.978 38.462 0.00 0.00 0.00 2.57
7705 8095 8.180165 AGATGGAGGGAGTAGTATGAATGAATA 58.820 37.037 0.00 0.00 0.00 1.75
7706 8096 8.923838 ATGGAGGGAGTAGTATGAATGAATAT 57.076 34.615 0.00 0.00 0.00 1.28
7707 8097 8.138928 TGGAGGGAGTAGTATGAATGAATATG 57.861 38.462 0.00 0.00 0.00 1.78
7708 8098 7.734865 TGGAGGGAGTAGTATGAATGAATATGT 59.265 37.037 0.00 0.00 0.00 2.29
7709 8099 9.256228 GGAGGGAGTAGTATGAATGAATATGTA 57.744 37.037 0.00 0.00 0.00 2.29
7711 8101 9.830186 AGGGAGTAGTATGAATGAATATGTAGT 57.170 33.333 0.00 0.00 0.00 2.73
7712 8102 9.862371 GGGAGTAGTATGAATGAATATGTAGTG 57.138 37.037 0.00 0.00 0.00 2.74
7716 8106 9.640963 GTAGTATGAATGAATATGTAGTGACCC 57.359 37.037 0.00 0.00 0.00 4.46
7717 8107 7.680730 AGTATGAATGAATATGTAGTGACCCC 58.319 38.462 0.00 0.00 0.00 4.95
7718 8108 5.304686 TGAATGAATATGTAGTGACCCCC 57.695 43.478 0.00 0.00 0.00 5.40
7750 8140 8.169910 TGAAAATATTTTGCAATGAAATCGCAG 58.830 29.630 17.98 0.00 36.91 5.18
7754 8144 1.249469 TGCAATGAAATCGCAGGCCA 61.249 50.000 5.01 0.00 0.00 5.36
7755 8145 0.108709 GCAATGAAATCGCAGGCCAA 60.109 50.000 5.01 0.00 0.00 4.52
7757 8147 1.473677 CAATGAAATCGCAGGCCAAGA 59.526 47.619 5.01 0.43 0.00 3.02
7766 8156 1.101331 GCAGGCCAAGATCTTTGGAG 58.899 55.000 21.24 13.46 42.06 3.86
7767 8157 1.615384 GCAGGCCAAGATCTTTGGAGT 60.615 52.381 21.24 9.17 42.06 3.85
7768 8158 2.800250 CAGGCCAAGATCTTTGGAGTT 58.200 47.619 21.24 8.05 42.06 3.01
7769 8159 3.160269 CAGGCCAAGATCTTTGGAGTTT 58.840 45.455 21.24 6.28 42.06 2.66
7770 8160 3.057033 CAGGCCAAGATCTTTGGAGTTTG 60.057 47.826 21.24 12.04 42.06 2.93
7771 8161 2.353109 GGCCAAGATCTTTGGAGTTTGC 60.353 50.000 21.24 8.80 42.06 3.68
7772 8162 2.353109 GCCAAGATCTTTGGAGTTTGCC 60.353 50.000 21.24 4.75 42.06 4.52
7773 8163 2.892852 CCAAGATCTTTGGAGTTTGCCA 59.107 45.455 4.86 0.00 42.06 4.92
7774 8164 3.512724 CCAAGATCTTTGGAGTTTGCCAT 59.487 43.478 4.86 0.00 42.06 4.40
7775 8165 4.491676 CAAGATCTTTGGAGTTTGCCATG 58.508 43.478 4.86 0.00 37.86 3.66
7776 8166 4.038271 AGATCTTTGGAGTTTGCCATGA 57.962 40.909 0.00 0.00 37.86 3.07
7777 8167 4.607239 AGATCTTTGGAGTTTGCCATGAT 58.393 39.130 0.00 0.00 37.86 2.45
7778 8168 4.643784 AGATCTTTGGAGTTTGCCATGATC 59.356 41.667 13.92 13.92 42.35 2.92
7779 8169 4.038271 TCTTTGGAGTTTGCCATGATCT 57.962 40.909 0.00 0.00 37.86 2.75
7780 8170 4.410099 TCTTTGGAGTTTGCCATGATCTT 58.590 39.130 0.00 0.00 37.86 2.40
7781 8171 4.834496 TCTTTGGAGTTTGCCATGATCTTT 59.166 37.500 0.00 0.00 37.86 2.52
7782 8172 5.305128 TCTTTGGAGTTTGCCATGATCTTTT 59.695 36.000 0.00 0.00 37.86 2.27
7783 8173 5.549742 TTGGAGTTTGCCATGATCTTTTT 57.450 34.783 0.00 0.00 37.86 1.94
7839 8229 5.009854 ACAAAATGGACTCACAAGTTTGG 57.990 39.130 0.00 0.00 35.28 3.28
7850 8240 1.342975 ACAAGTTTGGGCTTCAGGGTT 60.343 47.619 0.00 0.00 0.00 4.11
7851 8241 1.069049 CAAGTTTGGGCTTCAGGGTTG 59.931 52.381 0.00 0.00 0.00 3.77
7868 8258 1.862827 GTTGTTTAGAACGACCGCTGT 59.137 47.619 0.00 0.00 39.43 4.40
7916 8306 4.705507 ACCATGTAACTATCACACGTCTCT 59.294 41.667 0.00 0.00 0.00 3.10
7918 8308 4.959596 TGTAACTATCACACGTCTCTCC 57.040 45.455 0.00 0.00 0.00 3.71
7919 8309 4.586884 TGTAACTATCACACGTCTCTCCT 58.413 43.478 0.00 0.00 0.00 3.69
7920 8310 5.008331 TGTAACTATCACACGTCTCTCCTT 58.992 41.667 0.00 0.00 0.00 3.36
7921 8311 4.442375 AACTATCACACGTCTCTCCTTG 57.558 45.455 0.00 0.00 0.00 3.61
7922 8312 3.687125 ACTATCACACGTCTCTCCTTGA 58.313 45.455 0.00 0.00 0.00 3.02
7923 8313 4.274147 ACTATCACACGTCTCTCCTTGAT 58.726 43.478 0.00 0.00 0.00 2.57
7924 8314 3.516981 ATCACACGTCTCTCCTTGATG 57.483 47.619 0.00 0.00 0.00 3.07
7926 8316 0.109086 ACACGTCTCTCCTTGATGCG 60.109 55.000 0.00 0.00 0.00 4.73
7927 8317 0.803768 CACGTCTCTCCTTGATGCGG 60.804 60.000 0.00 0.00 0.00 5.69
7943 8333 1.741401 CGGTTGATGCGGCTCTTGA 60.741 57.895 0.00 0.00 0.00 3.02
7944 8334 1.796796 GGTTGATGCGGCTCTTGAC 59.203 57.895 0.00 0.00 0.00 3.18
7964 8371 2.036217 ACGTCTTTGATGTCAACGGGTA 59.964 45.455 9.63 0.00 35.28 3.69
7965 8372 2.410730 CGTCTTTGATGTCAACGGGTAC 59.589 50.000 0.00 0.00 35.28 3.34
7980 8387 2.704464 GGTACCTCGCCCTTTATTGT 57.296 50.000 4.06 0.00 0.00 2.71
7981 8388 2.558378 GGTACCTCGCCCTTTATTGTC 58.442 52.381 4.06 0.00 0.00 3.18
7982 8389 2.093341 GGTACCTCGCCCTTTATTGTCA 60.093 50.000 4.06 0.00 0.00 3.58
7983 8390 2.109425 ACCTCGCCCTTTATTGTCAC 57.891 50.000 0.00 0.00 0.00 3.67
7984 8391 1.006832 CCTCGCCCTTTATTGTCACG 58.993 55.000 0.00 0.00 0.00 4.35
7985 8392 1.674817 CCTCGCCCTTTATTGTCACGT 60.675 52.381 0.00 0.00 0.00 4.49
7986 8393 2.073816 CTCGCCCTTTATTGTCACGTT 58.926 47.619 0.00 0.00 0.00 3.99
7987 8394 1.801771 TCGCCCTTTATTGTCACGTTG 59.198 47.619 0.00 0.00 0.00 4.10
7988 8395 1.801771 CGCCCTTTATTGTCACGTTGA 59.198 47.619 0.00 0.00 0.00 3.18
7989 8396 2.224549 CGCCCTTTATTGTCACGTTGAA 59.775 45.455 0.00 0.00 0.00 2.69
7990 8397 3.119990 CGCCCTTTATTGTCACGTTGAAT 60.120 43.478 0.00 0.00 0.00 2.57
8007 8414 5.284079 GTTGAATTGTTGATGCTTCTGTGT 58.716 37.500 0.88 0.00 0.00 3.72
8017 8424 3.500448 TGCTTCTGTGTATGAAACCCA 57.500 42.857 0.00 0.00 0.00 4.51
8052 8600 1.126846 GAATCTGTTGGCGTGTCTTCG 59.873 52.381 0.00 0.00 0.00 3.79
8062 8610 1.132643 GCGTGTCTTCGGTCTCATAGT 59.867 52.381 0.00 0.00 0.00 2.12
8074 8622 2.625790 GTCTCATAGTACAGCTCCCTGG 59.374 54.545 0.00 0.00 43.53 4.45
8082 8630 0.109342 ACAGCTCCCTGGTTTGTGAG 59.891 55.000 0.00 0.00 43.53 3.51
8104 8652 2.429610 GAGTCCCGCACCTGTTTCTATA 59.570 50.000 0.00 0.00 0.00 1.31
8139 8687 1.680249 GCCTCCTGGAGAAAGCGAAAT 60.680 52.381 25.18 0.00 34.57 2.17
8140 8688 2.420129 GCCTCCTGGAGAAAGCGAAATA 60.420 50.000 25.18 0.00 34.57 1.40
8150 8701 5.334879 GGAGAAAGCGAAATATGTGTGTTGT 60.335 40.000 0.00 0.00 0.00 3.32
8160 8711 1.374560 TGTGTGTTGTGTAGTGTGGC 58.625 50.000 0.00 0.00 0.00 5.01
8161 8712 0.661020 GTGTGTTGTGTAGTGTGGCC 59.339 55.000 0.00 0.00 0.00 5.36
8162 8713 0.253327 TGTGTTGTGTAGTGTGGCCA 59.747 50.000 0.00 0.00 0.00 5.36
8163 8714 0.944386 GTGTTGTGTAGTGTGGCCAG 59.056 55.000 5.11 0.00 0.00 4.85
8164 8715 0.179032 TGTTGTGTAGTGTGGCCAGG 60.179 55.000 5.11 0.00 0.00 4.45
8165 8716 0.889186 GTTGTGTAGTGTGGCCAGGG 60.889 60.000 5.11 0.00 0.00 4.45
8166 8717 2.063015 TTGTGTAGTGTGGCCAGGGG 62.063 60.000 5.11 0.00 0.00 4.79
8167 8718 2.205749 TGTAGTGTGGCCAGGGGA 59.794 61.111 5.11 0.00 0.00 4.81
8168 8719 1.462432 TGTAGTGTGGCCAGGGGAA 60.462 57.895 5.11 0.00 0.00 3.97
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 8.282455 ACGACAGAAACAGAGAAAGATAGATA 57.718 34.615 0.00 0.00 0.00 1.98
10 11 7.164230 ACGACAGAAACAGAGAAAGATAGAT 57.836 36.000 0.00 0.00 0.00 1.98
11 12 6.576662 ACGACAGAAACAGAGAAAGATAGA 57.423 37.500 0.00 0.00 0.00 1.98
12 13 6.090088 CCAACGACAGAAACAGAGAAAGATAG 59.910 42.308 0.00 0.00 0.00 2.08
13 14 5.926542 CCAACGACAGAAACAGAGAAAGATA 59.073 40.000 0.00 0.00 0.00 1.98
19 20 3.194861 CAACCAACGACAGAAACAGAGA 58.805 45.455 0.00 0.00 0.00 3.10
22 23 1.268539 GCCAACCAACGACAGAAACAG 60.269 52.381 0.00 0.00 0.00 3.16
32 33 1.264288 GACAAGAGAAGCCAACCAACG 59.736 52.381 0.00 0.00 0.00 4.10
55 56 0.253347 ATGGAAGGAGAAGGAGGGCA 60.253 55.000 0.00 0.00 0.00 5.36
266 272 5.482526 TGGATTTACCAGAACACTGCTACTA 59.517 40.000 0.00 0.00 44.64 1.82
269 275 4.901197 TGGATTTACCAGAACACTGCTA 57.099 40.909 0.00 0.00 44.64 3.49
305 311 1.269723 CCCGGAGAAAAAGTTGAAGCC 59.730 52.381 0.73 0.00 0.00 4.35
350 356 6.555315 ACACGAAATTTTCATGGATTCTAGC 58.445 36.000 9.72 0.00 0.00 3.42
410 421 1.135859 GCTCAGAAACGTGCCAAGATG 60.136 52.381 0.00 0.00 0.00 2.90
496 507 4.037923 TGACTTTTGGTTTGAGATGAAGCC 59.962 41.667 0.00 0.00 0.00 4.35
540 551 2.029623 GTATGACCGCACTAAGAGGGA 58.970 52.381 0.00 0.00 42.23 4.20
549 560 4.604976 AGTATCTTTACGTATGACCGCAC 58.395 43.478 0.00 0.00 33.32 5.34
553 564 7.934457 TGTTAGGAGTATCTTTACGTATGACC 58.066 38.462 0.00 0.00 33.32 4.02
555 566 9.793252 GTTTGTTAGGAGTATCTTTACGTATGA 57.207 33.333 0.00 0.00 33.32 2.15
652 663 1.914389 GCGCACAACGGTCAAAAAC 59.086 52.632 0.30 0.00 43.93 2.43
718 734 1.509548 AATTGCAGTAGGGGGTGGCT 61.510 55.000 0.00 0.00 0.00 4.75
719 735 0.614697 AAATTGCAGTAGGGGGTGGC 60.615 55.000 0.00 0.00 0.00 5.01
721 737 2.094675 CAGAAATTGCAGTAGGGGGTG 58.905 52.381 0.00 0.00 0.00 4.61
722 738 1.710809 ACAGAAATTGCAGTAGGGGGT 59.289 47.619 0.00 0.00 0.00 4.95
725 741 3.274288 GGAGACAGAAATTGCAGTAGGG 58.726 50.000 0.00 0.00 0.00 3.53
801 832 6.687081 ATGAACGAAACCAAAACTAGACAA 57.313 33.333 0.00 0.00 0.00 3.18
812 847 7.573096 GCAGAAGATTTCTTATGAACGAAACCA 60.573 37.037 16.83 0.00 45.26 3.67
885 920 1.507140 AGATCTATTCCCGGCCAACA 58.493 50.000 2.24 0.00 0.00 3.33
895 930 8.254508 AGAAATCGGCCTACATAAGATCTATTC 58.745 37.037 0.00 0.00 0.00 1.75
968 1003 0.390860 AGAGAGCGCAACAGAACAGT 59.609 50.000 11.47 0.00 0.00 3.55
1083 1118 4.226384 AGAGGTTTTCTTGGAGCCATTTT 58.774 39.130 0.00 0.00 29.61 1.82
1123 1158 4.772100 TCTCAACAGATATGACCACAGTGA 59.228 41.667 0.62 0.00 0.00 3.41
1128 1163 6.577103 TGAAGATCTCAACAGATATGACCAC 58.423 40.000 0.00 0.00 39.71 4.16
1401 1488 3.623060 ACAACATTATAACAGGCAGAGCG 59.377 43.478 0.00 0.00 0.00 5.03
1735 2012 2.148916 ACAGTGTCACATGTGGTACG 57.851 50.000 25.16 19.11 0.00 3.67
2077 2359 4.098044 TCCACGTAAATGTTGCAAAAGGAA 59.902 37.500 0.00 0.00 0.00 3.36
2353 2635 7.939039 TCATCCAAATCTAACTGGTATTCATCC 59.061 37.037 0.00 0.00 34.11 3.51
2730 3012 1.566018 AAACCGCGGCTTCTTTCTCG 61.566 55.000 28.58 0.00 0.00 4.04
2745 3027 2.340337 GATTGCTGGCATTGTGAAACC 58.660 47.619 0.00 0.00 34.36 3.27
2887 3169 2.106166 CCTGATTAGCCCTCTCAAGCAT 59.894 50.000 0.00 0.00 0.00 3.79
2904 3186 1.005097 AGCTCCACATGCAAATCCTGA 59.995 47.619 0.00 0.00 0.00 3.86
3039 3321 0.250901 AAGACAGCCGTGCCATTTCT 60.251 50.000 0.00 0.00 0.00 2.52
3243 3525 4.679373 AATTATCTCATCCTGCAGACGT 57.321 40.909 17.39 0.00 0.00 4.34
3508 3790 5.940192 TTCTCAACATACAACGCTTTCAT 57.060 34.783 0.00 0.00 0.00 2.57
3552 3834 6.211986 TCTCCAAATGAGCATTTTTCTCCATT 59.788 34.615 5.75 0.00 41.18 3.16
3916 4198 5.872963 ACGGAGGGAGTAACAAAGTAAAAT 58.127 37.500 0.00 0.00 0.00 1.82
3928 4210 4.687262 ATATTATGGGACGGAGGGAGTA 57.313 45.455 0.00 0.00 0.00 2.59
3929 4211 3.562108 ATATTATGGGACGGAGGGAGT 57.438 47.619 0.00 0.00 0.00 3.85
3930 4212 5.269991 TCTTATATTATGGGACGGAGGGAG 58.730 45.833 0.00 0.00 0.00 4.30
3931 4213 5.222484 ACTCTTATATTATGGGACGGAGGGA 60.222 44.000 0.00 0.00 0.00 4.20
3932 4214 5.024118 ACTCTTATATTATGGGACGGAGGG 58.976 45.833 0.00 0.00 0.00 4.30
3933 4215 5.480772 ACACTCTTATATTATGGGACGGAGG 59.519 44.000 0.00 0.00 0.00 4.30
3934 4216 6.591750 ACACTCTTATATTATGGGACGGAG 57.408 41.667 0.00 0.00 0.00 4.63
3935 4217 6.989155 AACACTCTTATATTATGGGACGGA 57.011 37.500 0.00 0.00 0.00 4.69
3936 4218 8.342634 CAAAAACACTCTTATATTATGGGACGG 58.657 37.037 0.00 0.00 0.00 4.79
3937 4219 9.104965 TCAAAAACACTCTTATATTATGGGACG 57.895 33.333 0.00 0.00 0.00 4.79
3939 4221 9.967451 TGTCAAAAACACTCTTATATTATGGGA 57.033 29.630 0.00 0.00 31.20 4.37
3974 4256 8.269317 TCCGTCCCATAATATAAGAGTGTTTTT 58.731 33.333 0.00 0.00 0.00 1.94
3975 4257 7.798071 TCCGTCCCATAATATAAGAGTGTTTT 58.202 34.615 0.00 0.00 0.00 2.43
3976 4258 7.369551 TCCGTCCCATAATATAAGAGTGTTT 57.630 36.000 0.00 0.00 0.00 2.83
3977 4259 6.014499 CCTCCGTCCCATAATATAAGAGTGTT 60.014 42.308 0.00 0.00 0.00 3.32
3978 4260 5.480772 CCTCCGTCCCATAATATAAGAGTGT 59.519 44.000 0.00 0.00 0.00 3.55
3979 4261 5.105310 CCCTCCGTCCCATAATATAAGAGTG 60.105 48.000 0.00 0.00 0.00 3.51
3980 4262 5.024118 CCCTCCGTCCCATAATATAAGAGT 58.976 45.833 0.00 0.00 0.00 3.24
3981 4263 5.269991 TCCCTCCGTCCCATAATATAAGAG 58.730 45.833 0.00 0.00 0.00 2.85
3982 4264 5.222484 ACTCCCTCCGTCCCATAATATAAGA 60.222 44.000 0.00 0.00 0.00 2.10
3983 4265 5.024118 ACTCCCTCCGTCCCATAATATAAG 58.976 45.833 0.00 0.00 0.00 1.73
3984 4266 5.019657 ACTCCCTCCGTCCCATAATATAA 57.980 43.478 0.00 0.00 0.00 0.98
3985 4267 4.687262 ACTCCCTCCGTCCCATAATATA 57.313 45.455 0.00 0.00 0.00 0.86
3986 4268 3.562108 ACTCCCTCCGTCCCATAATAT 57.438 47.619 0.00 0.00 0.00 1.28
3987 4269 3.400322 ACTACTCCCTCCGTCCCATAATA 59.600 47.826 0.00 0.00 0.00 0.98
3988 4270 2.179424 ACTACTCCCTCCGTCCCATAAT 59.821 50.000 0.00 0.00 0.00 1.28
3989 4271 1.572415 ACTACTCCCTCCGTCCCATAA 59.428 52.381 0.00 0.00 0.00 1.90
3990 4272 1.229131 ACTACTCCCTCCGTCCCATA 58.771 55.000 0.00 0.00 0.00 2.74
3991 4273 0.338814 AACTACTCCCTCCGTCCCAT 59.661 55.000 0.00 0.00 0.00 4.00
3992 4274 0.324091 GAACTACTCCCTCCGTCCCA 60.324 60.000 0.00 0.00 0.00 4.37
3993 4275 0.324091 TGAACTACTCCCTCCGTCCC 60.324 60.000 0.00 0.00 0.00 4.46
3994 4276 1.777941 ATGAACTACTCCCTCCGTCC 58.222 55.000 0.00 0.00 0.00 4.79
3995 4277 2.496470 ACAATGAACTACTCCCTCCGTC 59.504 50.000 0.00 0.00 0.00 4.79
3996 4278 2.537143 ACAATGAACTACTCCCTCCGT 58.463 47.619 0.00 0.00 0.00 4.69
3997 4279 4.730949 TTACAATGAACTACTCCCTCCG 57.269 45.455 0.00 0.00 0.00 4.63
3998 4280 4.816925 GCATTACAATGAACTACTCCCTCC 59.183 45.833 6.13 0.00 38.70 4.30
3999 4281 5.675538 AGCATTACAATGAACTACTCCCTC 58.324 41.667 6.13 0.00 38.70 4.30
4000 4282 5.700402 AGCATTACAATGAACTACTCCCT 57.300 39.130 6.13 0.00 38.70 4.20
4001 4283 7.859325 TTTAGCATTACAATGAACTACTCCC 57.141 36.000 6.13 0.00 38.70 4.30
4002 4284 7.910683 GCTTTTAGCATTACAATGAACTACTCC 59.089 37.037 6.13 0.00 41.89 3.85
4003 4285 7.636359 CGCTTTTAGCATTACAATGAACTACTC 59.364 37.037 6.13 0.00 42.58 2.59
4004 4286 7.333423 TCGCTTTTAGCATTACAATGAACTACT 59.667 33.333 6.13 0.00 42.58 2.57
4005 4287 7.461107 TCGCTTTTAGCATTACAATGAACTAC 58.539 34.615 6.13 0.00 42.58 2.73
4180 4462 1.392510 GACCGCTTCATTACGAACCAC 59.607 52.381 0.00 0.00 0.00 4.16
4197 4479 5.469084 CCTTAACAGTTCCTGTAGTTTGACC 59.531 44.000 0.00 0.00 44.62 4.02
4240 4522 3.692257 ATCTGAGTGGGTGAGTTCTTG 57.308 47.619 0.00 0.00 0.00 3.02
4260 4542 4.709886 TGTATAGCACTGAACTGAGCCTTA 59.290 41.667 0.00 0.00 0.00 2.69
4341 4623 3.490439 TCAACAATCTTGTGCTCCTCA 57.510 42.857 0.00 0.00 41.31 3.86
4507 4789 3.356529 ACCAATCCCTTCAGTAAGCTG 57.643 47.619 0.00 0.00 43.87 4.24
4567 4849 3.054139 TCAACCTTCATCAGATCCAAGGG 60.054 47.826 17.26 3.97 39.93 3.95
4842 5124 0.031917 TACGGGCCTCCACATCCTTA 60.032 55.000 0.84 0.00 0.00 2.69
4848 5130 3.697747 CGGTTACGGGCCTCCACA 61.698 66.667 0.84 0.00 36.18 4.17
4887 5169 3.060473 GTCGAACCAAGAACTTTGACTCG 60.060 47.826 0.00 0.00 30.76 4.18
4929 5211 0.806868 CTTGCAATGACTGGCGTGAT 59.193 50.000 0.00 0.00 0.00 3.06
4942 5224 5.882000 TGAGCTTAATAATCTCAGCTTGCAA 59.118 36.000 0.00 0.00 42.80 4.08
4965 5247 3.243367 CCTGCGAGGAGTTCTCTTCTATG 60.243 52.174 9.57 0.00 37.67 2.23
4983 5265 3.507622 AGTCATAAAGTTTTCCTGCCTGC 59.492 43.478 0.00 0.00 0.00 4.85
4985 5267 4.985538 TGAGTCATAAAGTTTTCCTGCCT 58.014 39.130 0.00 0.00 0.00 4.75
5083 5365 5.004922 TCGTGAAGGCTTTTGAAAACAAT 57.995 34.783 0.00 0.00 0.00 2.71
5184 5466 5.177326 AGCTTCTTGTTCATCAGTCTGATC 58.823 41.667 12.62 2.92 34.28 2.92
5190 5472 2.555757 GCCAAGCTTCTTGTTCATCAGT 59.444 45.455 0.00 0.00 0.00 3.41
5424 5706 2.035632 AGCTCCTCCCTTAACATCTCG 58.964 52.381 0.00 0.00 0.00 4.04
5427 5709 3.055094 TGTGAAGCTCCTCCCTTAACATC 60.055 47.826 0.00 0.00 30.52 3.06
5485 5767 2.089980 GACATCAATCACTGGCTGCTT 58.910 47.619 0.00 0.00 0.00 3.91
5625 5907 6.102663 CACCTCCTTCTGTACTATTTCACTG 58.897 44.000 0.00 0.00 0.00 3.66
5730 6012 0.687354 TCAGGTCAACCTTCAGCCTC 59.313 55.000 0.00 0.00 46.09 4.70
5804 6086 0.755327 GGCCAGTGACAGGGTTTGTT 60.755 55.000 0.00 0.00 41.05 2.83
5869 6151 5.437289 ACATGGTACGGATAAAATGCATG 57.563 39.130 0.00 0.00 0.00 4.06
5900 6185 5.996644 ACGTGAATACAAATGGGGAAGATA 58.003 37.500 0.00 0.00 0.00 1.98
5912 6197 6.183360 GGCATCATACTTCAACGTGAATACAA 60.183 38.462 0.00 0.00 35.59 2.41
5919 6204 3.002791 ACTGGCATCATACTTCAACGTG 58.997 45.455 0.00 0.00 0.00 4.49
5921 6206 4.685169 AAACTGGCATCATACTTCAACG 57.315 40.909 0.00 0.00 0.00 4.10
5942 6227 7.724305 AACGTCTAGCAAAAAGAGTTGAATA 57.276 32.000 0.00 0.00 0.00 1.75
6043 6424 4.037208 GGCAAGTGAAATGAGACCCATATG 59.963 45.833 0.00 0.00 34.45 1.78
6172 6554 2.568062 TGCTTTGATGGTTCCATGCAAT 59.432 40.909 9.21 0.00 0.00 3.56
6341 6723 3.199508 AGCTGTATGTCCTTGAGCATTCT 59.800 43.478 0.00 0.00 31.80 2.40
6343 6725 3.641434 AGCTGTATGTCCTTGAGCATT 57.359 42.857 0.00 0.00 31.80 3.56
6432 6814 3.554692 GCATCTTGTCGTCGGGCG 61.555 66.667 0.00 0.00 43.01 6.13
6610 6992 4.265056 GTGGTGACCACGGGCCTT 62.265 66.667 20.19 0.00 44.95 4.35
6622 7004 4.624364 TGCGGCTCTGTGGTGGTG 62.624 66.667 0.00 0.00 0.00 4.17
6706 7088 0.267054 TCAGCTCCTGGAGGATGGAT 59.733 55.000 24.43 0.00 44.46 3.41
6823 7205 1.900016 CTTGGTCAGCAGCTTGCCA 60.900 57.895 10.01 10.01 46.52 4.92
7398 7785 9.195411 ACGAAAGATTTAACAGTTTATACGACA 57.805 29.630 0.00 0.00 0.00 4.35
7399 7786 9.667500 GACGAAAGATTTAACAGTTTATACGAC 57.332 33.333 0.00 0.00 0.00 4.34
7400 7787 8.577939 CGACGAAAGATTTAACAGTTTATACGA 58.422 33.333 0.00 0.00 0.00 3.43
7401 7788 8.368126 ACGACGAAAGATTTAACAGTTTATACG 58.632 33.333 0.00 0.00 0.00 3.06
7406 7793 9.940166 AAATTACGACGAAAGATTTAACAGTTT 57.060 25.926 0.00 0.00 0.00 2.66
7407 7794 9.940166 AAAATTACGACGAAAGATTTAACAGTT 57.060 25.926 0.00 0.00 0.00 3.16
7408 7795 9.377383 CAAAATTACGACGAAAGATTTAACAGT 57.623 29.630 0.00 0.00 0.00 3.55
7409 7796 9.377383 ACAAAATTACGACGAAAGATTTAACAG 57.623 29.630 0.00 0.00 0.00 3.16
7410 7797 9.719279 AACAAAATTACGACGAAAGATTTAACA 57.281 25.926 0.00 0.00 0.00 2.41
7412 7799 9.094459 CGAACAAAATTACGACGAAAGATTTAA 57.906 29.630 0.00 0.00 0.00 1.52
7413 7800 7.266756 GCGAACAAAATTACGACGAAAGATTTA 59.733 33.333 0.00 0.00 0.00 1.40
7414 7801 6.085849 GCGAACAAAATTACGACGAAAGATTT 59.914 34.615 0.00 0.00 0.00 2.17
7415 7802 5.562623 GCGAACAAAATTACGACGAAAGATT 59.437 36.000 0.00 0.00 0.00 2.40
7416 7803 5.077424 GCGAACAAAATTACGACGAAAGAT 58.923 37.500 0.00 0.00 0.00 2.40
7417 7804 4.209703 AGCGAACAAAATTACGACGAAAGA 59.790 37.500 0.00 0.00 0.00 2.52
7418 7805 4.451557 AGCGAACAAAATTACGACGAAAG 58.548 39.130 0.00 0.00 0.00 2.62
7419 7806 4.025896 TGAGCGAACAAAATTACGACGAAA 60.026 37.500 0.00 0.00 0.00 3.46
7420 7807 3.490155 TGAGCGAACAAAATTACGACGAA 59.510 39.130 0.00 0.00 0.00 3.85
7421 7808 3.051327 TGAGCGAACAAAATTACGACGA 58.949 40.909 0.00 0.00 0.00 4.20
7422 7809 3.427516 TGAGCGAACAAAATTACGACG 57.572 42.857 0.00 0.00 0.00 5.12
7423 7810 4.708601 ACATGAGCGAACAAAATTACGAC 58.291 39.130 0.00 0.00 0.00 4.34
7424 7811 5.405873 TGTACATGAGCGAACAAAATTACGA 59.594 36.000 0.00 0.00 0.00 3.43
7425 7812 5.613812 TGTACATGAGCGAACAAAATTACG 58.386 37.500 0.00 0.00 0.00 3.18
7426 7813 8.447787 AATTGTACATGAGCGAACAAAATTAC 57.552 30.769 0.00 0.00 35.63 1.89
7428 7815 9.075519 CATAATTGTACATGAGCGAACAAAATT 57.924 29.630 0.00 0.00 35.63 1.82
7429 7816 8.458052 TCATAATTGTACATGAGCGAACAAAAT 58.542 29.630 0.00 0.00 35.63 1.82
7430 7817 7.811653 TCATAATTGTACATGAGCGAACAAAA 58.188 30.769 0.00 0.00 35.63 2.44
7431 7818 7.371126 TCATAATTGTACATGAGCGAACAAA 57.629 32.000 0.00 0.00 35.63 2.83
7432 7819 6.976636 TCATAATTGTACATGAGCGAACAA 57.023 33.333 0.00 2.47 36.37 2.83
7433 7820 6.511605 GCATCATAATTGTACATGAGCGAACA 60.512 38.462 0.00 0.00 34.79 3.18
7434 7821 5.848036 GCATCATAATTGTACATGAGCGAAC 59.152 40.000 0.00 0.00 34.79 3.95
7435 7822 5.759763 AGCATCATAATTGTACATGAGCGAA 59.240 36.000 0.00 0.00 34.79 4.70
7436 7823 5.178067 CAGCATCATAATTGTACATGAGCGA 59.822 40.000 0.00 0.00 34.79 4.93
7437 7824 5.049886 ACAGCATCATAATTGTACATGAGCG 60.050 40.000 0.00 0.00 34.79 5.03
7438 7825 6.309712 ACAGCATCATAATTGTACATGAGC 57.690 37.500 0.00 3.85 34.79 4.26
7439 7826 9.577110 AAAAACAGCATCATAATTGTACATGAG 57.423 29.630 0.00 0.00 34.79 2.90
7440 7827 9.571810 GAAAAACAGCATCATAATTGTACATGA 57.428 29.630 0.00 0.00 35.72 3.07
7441 7828 9.356433 TGAAAAACAGCATCATAATTGTACATG 57.644 29.630 0.00 0.00 0.00 3.21
7443 7830 9.926158 AATGAAAAACAGCATCATAATTGTACA 57.074 25.926 0.00 0.00 33.60 2.90
7445 7832 9.585099 GGAATGAAAAACAGCATCATAATTGTA 57.415 29.630 0.00 0.00 33.60 2.41
7446 7833 7.550196 GGGAATGAAAAACAGCATCATAATTGT 59.450 33.333 0.00 0.00 33.60 2.71
7447 7834 7.254185 CGGGAATGAAAAACAGCATCATAATTG 60.254 37.037 0.00 0.00 33.60 2.32
7448 7835 6.757947 CGGGAATGAAAAACAGCATCATAATT 59.242 34.615 0.00 0.00 33.60 1.40
7449 7836 6.127366 ACGGGAATGAAAAACAGCATCATAAT 60.127 34.615 0.00 0.00 33.60 1.28
7450 7837 5.184864 ACGGGAATGAAAAACAGCATCATAA 59.815 36.000 0.00 0.00 33.60 1.90
7451 7838 4.704540 ACGGGAATGAAAAACAGCATCATA 59.295 37.500 0.00 0.00 33.60 2.15
7452 7839 3.511146 ACGGGAATGAAAAACAGCATCAT 59.489 39.130 0.00 0.00 35.39 2.45
7453 7840 2.890311 ACGGGAATGAAAAACAGCATCA 59.110 40.909 0.00 0.00 0.00 3.07
7454 7841 3.575965 ACGGGAATGAAAAACAGCATC 57.424 42.857 0.00 0.00 0.00 3.91
7455 7842 3.320541 TCAACGGGAATGAAAAACAGCAT 59.679 39.130 0.00 0.00 0.00 3.79
7456 7843 2.690497 TCAACGGGAATGAAAAACAGCA 59.310 40.909 0.00 0.00 0.00 4.41
7457 7844 3.049912 GTCAACGGGAATGAAAAACAGC 58.950 45.455 0.00 0.00 0.00 4.40
7458 7845 4.036262 TCTGTCAACGGGAATGAAAAACAG 59.964 41.667 0.00 0.00 0.00 3.16
7459 7846 3.948473 TCTGTCAACGGGAATGAAAAACA 59.052 39.130 0.00 0.00 0.00 2.83
7460 7847 4.537015 CTCTGTCAACGGGAATGAAAAAC 58.463 43.478 0.00 0.00 0.00 2.43
7461 7848 3.568007 CCTCTGTCAACGGGAATGAAAAA 59.432 43.478 0.00 0.00 0.00 1.94
7462 7849 3.146066 CCTCTGTCAACGGGAATGAAAA 58.854 45.455 0.00 0.00 0.00 2.29
7463 7850 2.105821 ACCTCTGTCAACGGGAATGAAA 59.894 45.455 0.00 0.00 0.00 2.69
7464 7851 1.697432 ACCTCTGTCAACGGGAATGAA 59.303 47.619 0.00 0.00 0.00 2.57
7465 7852 1.348064 ACCTCTGTCAACGGGAATGA 58.652 50.000 0.00 0.00 0.00 2.57
7466 7853 3.328382 TTACCTCTGTCAACGGGAATG 57.672 47.619 0.00 0.00 0.00 2.67
7467 7854 3.326880 AGTTTACCTCTGTCAACGGGAAT 59.673 43.478 0.00 0.00 34.49 3.01
7468 7855 2.701951 AGTTTACCTCTGTCAACGGGAA 59.298 45.455 0.00 0.00 34.49 3.97
7469 7856 2.036733 CAGTTTACCTCTGTCAACGGGA 59.963 50.000 0.00 0.00 34.49 5.14
7470 7857 2.224209 ACAGTTTACCTCTGTCAACGGG 60.224 50.000 0.00 0.00 41.52 5.28
7471 7858 3.107642 ACAGTTTACCTCTGTCAACGG 57.892 47.619 0.00 0.00 41.52 4.44
7472 7859 6.645415 AGATTAACAGTTTACCTCTGTCAACG 59.355 38.462 0.00 0.00 44.03 4.10
7473 7860 7.964604 AGATTAACAGTTTACCTCTGTCAAC 57.035 36.000 0.00 0.00 44.03 3.18
7474 7861 8.836413 CAAAGATTAACAGTTTACCTCTGTCAA 58.164 33.333 0.00 0.00 44.03 3.18
7475 7862 7.444183 CCAAAGATTAACAGTTTACCTCTGTCA 59.556 37.037 0.00 0.00 44.03 3.58
7476 7863 7.444487 ACCAAAGATTAACAGTTTACCTCTGTC 59.556 37.037 0.00 0.00 44.03 3.51
7477 7864 7.287810 ACCAAAGATTAACAGTTTACCTCTGT 58.712 34.615 0.00 0.00 46.30 3.41
7478 7865 7.360101 CGACCAAAGATTAACAGTTTACCTCTG 60.360 40.741 0.00 0.00 38.68 3.35
7479 7866 6.649557 CGACCAAAGATTAACAGTTTACCTCT 59.350 38.462 0.00 0.00 0.00 3.69
7480 7867 6.426025 ACGACCAAAGATTAACAGTTTACCTC 59.574 38.462 0.00 0.00 0.00 3.85
7481 7868 6.293698 ACGACCAAAGATTAACAGTTTACCT 58.706 36.000 0.00 0.00 0.00 3.08
7482 7869 6.549912 ACGACCAAAGATTAACAGTTTACC 57.450 37.500 0.00 0.00 0.00 2.85
7483 7870 8.928733 TCATACGACCAAAGATTAACAGTTTAC 58.071 33.333 0.00 0.00 0.00 2.01
7484 7871 9.491675 TTCATACGACCAAAGATTAACAGTTTA 57.508 29.630 0.00 0.00 0.00 2.01
7485 7872 7.972832 TCATACGACCAAAGATTAACAGTTT 57.027 32.000 0.00 0.00 0.00 2.66
7486 7873 7.660208 AGTTCATACGACCAAAGATTAACAGTT 59.340 33.333 0.00 0.00 0.00 3.16
7487 7874 7.117812 CAGTTCATACGACCAAAGATTAACAGT 59.882 37.037 0.00 0.00 0.00 3.55
7488 7875 7.117812 ACAGTTCATACGACCAAAGATTAACAG 59.882 37.037 0.00 0.00 0.00 3.16
7489 7876 6.932400 ACAGTTCATACGACCAAAGATTAACA 59.068 34.615 0.00 0.00 0.00 2.41
7490 7877 7.360575 ACAGTTCATACGACCAAAGATTAAC 57.639 36.000 0.00 0.00 0.00 2.01
7491 7878 7.972832 AACAGTTCATACGACCAAAGATTAA 57.027 32.000 0.00 0.00 0.00 1.40
7492 7879 9.661563 ATTAACAGTTCATACGACCAAAGATTA 57.338 29.630 0.00 0.00 0.00 1.75
7500 7887 6.309737 ACGAAAGATTAACAGTTCATACGACC 59.690 38.462 0.00 0.00 0.00 4.79
7503 7890 6.033196 ACGACGAAAGATTAACAGTTCATACG 59.967 38.462 0.00 0.00 0.00 3.06
7508 7895 9.590088 AAAATTACGACGAAAGATTAACAGTTC 57.410 29.630 0.00 0.00 0.00 3.01
7538 7925 3.558829 AGCATCAGAATTGTACATGAGCG 59.441 43.478 0.00 0.00 0.00 5.03
7539 7926 4.334759 ACAGCATCAGAATTGTACATGAGC 59.665 41.667 0.00 3.85 0.00 4.26
7582 7972 3.703001 ACCGAAGAACATGAACTGGAT 57.297 42.857 0.00 0.00 0.00 3.41
7585 7975 4.393062 AGCATAACCGAAGAACATGAACTG 59.607 41.667 0.00 0.00 0.00 3.16
7586 7976 4.579869 AGCATAACCGAAGAACATGAACT 58.420 39.130 0.00 0.00 0.00 3.01
7599 7989 1.887707 GGCGGAGGAAGCATAACCG 60.888 63.158 0.00 0.00 45.26 4.44
7600 7990 1.526225 GGGCGGAGGAAGCATAACC 60.526 63.158 0.00 0.00 36.08 2.85
7602 7992 1.618876 TTCGGGCGGAGGAAGCATAA 61.619 55.000 0.00 0.00 36.08 1.90
7603 7993 1.618876 TTTCGGGCGGAGGAAGCATA 61.619 55.000 0.00 0.00 36.08 3.14
7604 7994 2.478335 TTTTCGGGCGGAGGAAGCAT 62.478 55.000 0.00 0.00 36.08 3.79
7605 7995 2.478335 ATTTTCGGGCGGAGGAAGCA 62.478 55.000 0.00 0.00 36.08 3.91
7606 7996 0.463116 TATTTTCGGGCGGAGGAAGC 60.463 55.000 0.00 0.00 0.00 3.86
7607 7997 1.940613 CTTATTTTCGGGCGGAGGAAG 59.059 52.381 0.00 0.00 0.00 3.46
7608 7998 1.279846 ACTTATTTTCGGGCGGAGGAA 59.720 47.619 0.00 0.00 0.00 3.36
7609 7999 0.906775 ACTTATTTTCGGGCGGAGGA 59.093 50.000 0.00 0.00 0.00 3.71
7610 8000 1.014352 CACTTATTTTCGGGCGGAGG 58.986 55.000 0.00 0.00 0.00 4.30
7611 8001 1.734163 ACACTTATTTTCGGGCGGAG 58.266 50.000 0.00 0.00 0.00 4.63
7612 8002 1.807742 CAACACTTATTTTCGGGCGGA 59.192 47.619 0.00 0.00 0.00 5.54
7613 8003 1.731098 GCAACACTTATTTTCGGGCGG 60.731 52.381 0.00 0.00 0.00 6.13
7614 8004 1.199097 AGCAACACTTATTTTCGGGCG 59.801 47.619 0.00 0.00 0.00 6.13
7615 8005 2.227865 TCAGCAACACTTATTTTCGGGC 59.772 45.455 0.00 0.00 0.00 6.13
7616 8006 4.701956 ATCAGCAACACTTATTTTCGGG 57.298 40.909 0.00 0.00 0.00 5.14
7617 8007 7.305474 ACTAAATCAGCAACACTTATTTTCGG 58.695 34.615 0.00 0.00 34.69 4.30
7618 8008 9.988350 ATACTAAATCAGCAACACTTATTTTCG 57.012 29.630 0.00 0.00 34.69 3.46
7626 8016 9.284968 ACAAAGTTATACTAAATCAGCAACACT 57.715 29.630 0.00 0.00 0.00 3.55
7643 8033 8.941977 TGTGTCGCTGATTTAATACAAAGTTAT 58.058 29.630 0.00 0.00 0.00 1.89
7644 8034 8.225107 GTGTGTCGCTGATTTAATACAAAGTTA 58.775 33.333 0.00 0.00 0.00 2.24
7645 8035 7.075741 GTGTGTCGCTGATTTAATACAAAGTT 58.924 34.615 0.00 0.00 0.00 2.66
7646 8036 6.203915 TGTGTGTCGCTGATTTAATACAAAGT 59.796 34.615 0.00 0.00 0.00 2.66
7647 8037 6.598525 TGTGTGTCGCTGATTTAATACAAAG 58.401 36.000 0.00 0.00 0.00 2.77
7648 8038 6.546972 TGTGTGTCGCTGATTTAATACAAA 57.453 33.333 0.00 0.00 0.00 2.83
7649 8039 6.148645 ACATGTGTGTCGCTGATTTAATACAA 59.851 34.615 0.00 0.00 31.41 2.41
7650 8040 5.641636 ACATGTGTGTCGCTGATTTAATACA 59.358 36.000 0.00 0.00 31.41 2.29
7651 8041 6.106877 ACATGTGTGTCGCTGATTTAATAC 57.893 37.500 0.00 0.00 31.41 1.89
7652 8042 6.735678 AACATGTGTGTCGCTGATTTAATA 57.264 33.333 0.00 0.00 37.67 0.98
7653 8043 5.627499 AACATGTGTGTCGCTGATTTAAT 57.373 34.783 0.00 0.00 37.67 1.40
7654 8044 5.431420 AAACATGTGTGTCGCTGATTTAA 57.569 34.783 0.00 0.00 37.67 1.52
7655 8045 5.008118 TCAAAACATGTGTGTCGCTGATTTA 59.992 36.000 0.00 0.00 37.67 1.40
7656 8046 3.988379 AAACATGTGTGTCGCTGATTT 57.012 38.095 0.00 0.00 37.67 2.17
7657 8047 3.314913 TCAAAACATGTGTGTCGCTGATT 59.685 39.130 0.00 0.00 37.67 2.57
7658 8048 2.877786 TCAAAACATGTGTGTCGCTGAT 59.122 40.909 0.00 0.00 37.67 2.90
7659 8049 2.284190 TCAAAACATGTGTGTCGCTGA 58.716 42.857 0.00 0.00 37.67 4.26
7660 8050 2.287644 TCTCAAAACATGTGTGTCGCTG 59.712 45.455 0.00 0.00 37.67 5.18
7661 8051 2.560504 TCTCAAAACATGTGTGTCGCT 58.439 42.857 0.00 0.00 37.67 4.93
7662 8052 3.228749 CATCTCAAAACATGTGTGTCGC 58.771 45.455 0.00 0.00 37.67 5.19
7663 8053 3.498018 TCCATCTCAAAACATGTGTGTCG 59.502 43.478 0.00 0.00 37.67 4.35
7664 8054 4.083110 CCTCCATCTCAAAACATGTGTGTC 60.083 45.833 0.00 0.00 37.67 3.67
7665 8055 3.822735 CCTCCATCTCAAAACATGTGTGT 59.177 43.478 0.00 0.00 41.28 3.72
7666 8056 3.192001 CCCTCCATCTCAAAACATGTGTG 59.808 47.826 0.00 0.66 0.00 3.82
7667 8057 3.074390 TCCCTCCATCTCAAAACATGTGT 59.926 43.478 0.00 0.00 0.00 3.72
7668 8058 3.689347 TCCCTCCATCTCAAAACATGTG 58.311 45.455 0.00 0.00 0.00 3.21
7669 8059 3.331889 ACTCCCTCCATCTCAAAACATGT 59.668 43.478 0.00 0.00 0.00 3.21
7670 8060 3.960571 ACTCCCTCCATCTCAAAACATG 58.039 45.455 0.00 0.00 0.00 3.21
7671 8061 4.785376 ACTACTCCCTCCATCTCAAAACAT 59.215 41.667 0.00 0.00 0.00 2.71
7672 8062 4.168101 ACTACTCCCTCCATCTCAAAACA 58.832 43.478 0.00 0.00 0.00 2.83
7673 8063 4.828072 ACTACTCCCTCCATCTCAAAAC 57.172 45.455 0.00 0.00 0.00 2.43
7674 8064 6.202331 TCATACTACTCCCTCCATCTCAAAA 58.798 40.000 0.00 0.00 0.00 2.44
7675 8065 5.777449 TCATACTACTCCCTCCATCTCAAA 58.223 41.667 0.00 0.00 0.00 2.69
7676 8066 5.403558 TCATACTACTCCCTCCATCTCAA 57.596 43.478 0.00 0.00 0.00 3.02
7677 8067 5.403558 TTCATACTACTCCCTCCATCTCA 57.596 43.478 0.00 0.00 0.00 3.27
7678 8068 6.013379 TCATTCATACTACTCCCTCCATCTC 58.987 44.000 0.00 0.00 0.00 2.75
7679 8069 5.970289 TCATTCATACTACTCCCTCCATCT 58.030 41.667 0.00 0.00 0.00 2.90
7680 8070 6.672266 TTCATTCATACTACTCCCTCCATC 57.328 41.667 0.00 0.00 0.00 3.51
7681 8071 8.766476 CATATTCATTCATACTACTCCCTCCAT 58.234 37.037 0.00 0.00 0.00 3.41
7682 8072 7.734865 ACATATTCATTCATACTACTCCCTCCA 59.265 37.037 0.00 0.00 0.00 3.86
7683 8073 8.140112 ACATATTCATTCATACTACTCCCTCC 57.860 38.462 0.00 0.00 0.00 4.30
7685 8075 9.830186 ACTACATATTCATTCATACTACTCCCT 57.170 33.333 0.00 0.00 0.00 4.20
7686 8076 9.862371 CACTACATATTCATTCATACTACTCCC 57.138 37.037 0.00 0.00 0.00 4.30
7690 8080 9.640963 GGGTCACTACATATTCATTCATACTAC 57.359 37.037 0.00 0.00 0.00 2.73
7691 8081 8.812972 GGGGTCACTACATATTCATTCATACTA 58.187 37.037 0.00 0.00 0.00 1.82
7692 8082 7.256691 GGGGGTCACTACATATTCATTCATACT 60.257 40.741 0.00 0.00 0.00 2.12
7693 8083 6.879458 GGGGGTCACTACATATTCATTCATAC 59.121 42.308 0.00 0.00 0.00 2.39
7694 8084 7.016153 GGGGGTCACTACATATTCATTCATA 57.984 40.000 0.00 0.00 0.00 2.15
7695 8085 5.880901 GGGGGTCACTACATATTCATTCAT 58.119 41.667 0.00 0.00 0.00 2.57
7696 8086 5.304686 GGGGGTCACTACATATTCATTCA 57.695 43.478 0.00 0.00 0.00 2.57
7715 8105 6.293004 TGCAAAATATTTTCAACTAGGGGG 57.707 37.500 10.53 0.00 0.00 5.40
7716 8106 8.040132 TCATTGCAAAATATTTTCAACTAGGGG 58.960 33.333 19.17 6.43 0.00 4.79
7717 8107 9.434420 TTCATTGCAAAATATTTTCAACTAGGG 57.566 29.630 19.17 6.95 0.00 3.53
7737 8127 1.473677 TCTTGGCCTGCGATTTCATTG 59.526 47.619 3.32 0.00 0.00 2.82
7750 8140 2.353109 GCAAACTCCAAAGATCTTGGCC 60.353 50.000 9.17 0.00 39.38 5.36
7754 8144 4.410099 TCATGGCAAACTCCAAAGATCTT 58.590 39.130 0.88 0.88 39.96 2.40
7755 8145 4.038271 TCATGGCAAACTCCAAAGATCT 57.962 40.909 0.00 0.00 39.96 2.75
7757 8147 4.607239 AGATCATGGCAAACTCCAAAGAT 58.393 39.130 0.00 0.00 39.96 2.40
7784 8174 2.402564 TCATGGCAAACCCCTCAAAAA 58.597 42.857 0.00 0.00 33.59 1.94
7785 8175 2.094100 TCATGGCAAACCCCTCAAAA 57.906 45.000 0.00 0.00 33.59 2.44
7786 8176 2.178580 GATCATGGCAAACCCCTCAAA 58.821 47.619 0.00 0.00 33.59 2.69
7787 8177 1.358787 AGATCATGGCAAACCCCTCAA 59.641 47.619 0.00 0.00 33.59 3.02
7788 8178 1.002069 AGATCATGGCAAACCCCTCA 58.998 50.000 0.00 0.00 33.59 3.86
7789 8179 2.439507 TCTAGATCATGGCAAACCCCTC 59.560 50.000 0.00 0.00 33.59 4.30
7790 8180 2.492025 TCTAGATCATGGCAAACCCCT 58.508 47.619 0.00 0.00 33.59 4.79
7791 8181 3.297134 TTCTAGATCATGGCAAACCCC 57.703 47.619 0.00 0.00 33.59 4.95
7792 8182 4.440663 GCTTTTCTAGATCATGGCAAACCC 60.441 45.833 0.00 0.00 33.59 4.11
7793 8183 4.400567 AGCTTTTCTAGATCATGGCAAACC 59.599 41.667 0.00 0.00 0.00 3.27
7794 8184 5.573337 AGCTTTTCTAGATCATGGCAAAC 57.427 39.130 0.00 0.00 0.00 2.93
7839 8229 2.225727 CGTTCTAAACAACCCTGAAGCC 59.774 50.000 0.00 0.00 0.00 4.35
7850 8240 2.228138 AACAGCGGTCGTTCTAAACA 57.772 45.000 0.00 0.00 0.00 2.83
7851 8241 2.349155 CCAAACAGCGGTCGTTCTAAAC 60.349 50.000 0.00 0.00 0.00 2.01
7868 8258 3.922640 GTTGCGCCCAAGCCCAAA 61.923 61.111 4.18 0.00 38.46 3.28
7916 8306 1.368345 CGCATCAACCGCATCAAGGA 61.368 55.000 0.00 0.00 0.00 3.36
7918 8308 1.063006 CCGCATCAACCGCATCAAG 59.937 57.895 0.00 0.00 0.00 3.02
7919 8309 3.050166 GCCGCATCAACCGCATCAA 62.050 57.895 0.00 0.00 0.00 2.57
7920 8310 3.507924 GCCGCATCAACCGCATCA 61.508 61.111 0.00 0.00 0.00 3.07
7921 8311 3.173390 GAGCCGCATCAACCGCATC 62.173 63.158 0.00 0.00 0.00 3.91
7922 8312 3.204827 GAGCCGCATCAACCGCAT 61.205 61.111 0.00 0.00 0.00 4.73
7923 8313 3.899981 AAGAGCCGCATCAACCGCA 62.900 57.895 0.00 0.00 0.00 5.69
7924 8314 3.127533 AAGAGCCGCATCAACCGC 61.128 61.111 0.00 0.00 0.00 5.68
7926 8316 1.796796 GTCAAGAGCCGCATCAACC 59.203 57.895 0.00 0.00 0.00 3.77
7927 8317 1.291877 ACGTCAAGAGCCGCATCAAC 61.292 55.000 0.00 0.00 0.00 3.18
7943 8333 1.202604 ACCCGTTGACATCAAAGACGT 60.203 47.619 8.84 0.00 37.49 4.34
7944 8334 1.508632 ACCCGTTGACATCAAAGACG 58.491 50.000 8.84 3.78 37.49 4.18
7964 8371 1.674817 CGTGACAATAAAGGGCGAGGT 60.675 52.381 0.00 0.00 0.00 3.85
7965 8372 1.006832 CGTGACAATAAAGGGCGAGG 58.993 55.000 0.00 0.00 0.00 4.63
7967 8374 1.801771 CAACGTGACAATAAAGGGCGA 59.198 47.619 0.00 0.00 0.00 5.54
7968 8375 1.801771 TCAACGTGACAATAAAGGGCG 59.198 47.619 0.00 0.00 0.00 6.13
7969 8376 3.907894 TTCAACGTGACAATAAAGGGC 57.092 42.857 0.00 0.00 0.00 5.19
7970 8377 5.768317 ACAATTCAACGTGACAATAAAGGG 58.232 37.500 0.00 0.00 0.00 3.95
7971 8378 6.915300 TCAACAATTCAACGTGACAATAAAGG 59.085 34.615 0.00 0.00 0.00 3.11
7972 8379 7.906611 TCAACAATTCAACGTGACAATAAAG 57.093 32.000 0.00 0.00 0.00 1.85
7973 8380 7.096271 GCATCAACAATTCAACGTGACAATAAA 60.096 33.333 0.00 0.00 0.00 1.40
7974 8381 6.362016 GCATCAACAATTCAACGTGACAATAA 59.638 34.615 0.00 0.00 0.00 1.40
7975 8382 5.855925 GCATCAACAATTCAACGTGACAATA 59.144 36.000 0.00 0.00 0.00 1.90
7976 8383 4.681025 GCATCAACAATTCAACGTGACAAT 59.319 37.500 0.00 0.00 0.00 2.71
7980 8387 4.275689 AGAAGCATCAACAATTCAACGTGA 59.724 37.500 0.00 0.00 0.00 4.35
7981 8388 4.380678 CAGAAGCATCAACAATTCAACGTG 59.619 41.667 0.00 0.00 0.00 4.49
7982 8389 4.036734 ACAGAAGCATCAACAATTCAACGT 59.963 37.500 0.00 0.00 0.00 3.99
7983 8390 4.380678 CACAGAAGCATCAACAATTCAACG 59.619 41.667 0.00 0.00 0.00 4.10
7984 8391 5.284079 ACACAGAAGCATCAACAATTCAAC 58.716 37.500 0.00 0.00 0.00 3.18
7985 8392 5.518848 ACACAGAAGCATCAACAATTCAA 57.481 34.783 0.00 0.00 0.00 2.69
7986 8393 6.430616 TCATACACAGAAGCATCAACAATTCA 59.569 34.615 0.00 0.00 0.00 2.57
7987 8394 6.845302 TCATACACAGAAGCATCAACAATTC 58.155 36.000 0.00 0.00 0.00 2.17
7988 8395 6.822667 TCATACACAGAAGCATCAACAATT 57.177 33.333 0.00 0.00 0.00 2.32
7989 8396 6.822667 TTCATACACAGAAGCATCAACAAT 57.177 33.333 0.00 0.00 0.00 2.71
7990 8397 6.437928 GTTTCATACACAGAAGCATCAACAA 58.562 36.000 0.00 0.00 0.00 2.83
8007 8414 4.461081 GCACACACCTTTATGGGTTTCATA 59.539 41.667 0.00 0.00 41.11 2.15
8017 8424 3.009723 CAGATTCCGCACACACCTTTAT 58.990 45.455 0.00 0.00 0.00 1.40
8052 8600 2.625790 CAGGGAGCTGTACTATGAGACC 59.374 54.545 0.00 0.00 0.00 3.85
8062 8610 1.347707 CTCACAAACCAGGGAGCTGTA 59.652 52.381 0.00 0.00 0.00 2.74
8074 8622 1.070786 TGCGGGACTCCTCACAAAC 59.929 57.895 0.00 0.00 0.00 2.93
8082 8630 1.671379 GAAACAGGTGCGGGACTCC 60.671 63.158 0.00 0.00 0.00 3.85
8112 8660 0.984230 TTCTCCAGGAGGCGAAACAT 59.016 50.000 17.10 0.00 35.76 2.71
8113 8661 0.762418 TTTCTCCAGGAGGCGAAACA 59.238 50.000 17.10 0.00 42.17 2.83
8114 8662 1.443802 CTTTCTCCAGGAGGCGAAAC 58.556 55.000 17.10 0.00 42.17 2.78
8120 8668 2.409948 ATTTCGCTTTCTCCAGGAGG 57.590 50.000 17.10 1.56 0.00 4.30
8139 8687 3.135225 GCCACACTACACAACACACATA 58.865 45.455 0.00 0.00 0.00 2.29
8140 8688 1.946768 GCCACACTACACAACACACAT 59.053 47.619 0.00 0.00 0.00 3.21
8150 8701 1.462432 TTCCCCTGGCCACACTACA 60.462 57.895 0.00 0.00 0.00 2.74


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.