Multiple sequence alignment - TraesCS5D01G065100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G065100 chr5D 100.000 7841 0 0 1 7841 60478939 60471099 0.000000e+00 14480.0
1 TraesCS5D01G065100 chr5D 94.913 747 33 5 3 746 565348108 565348852 0.000000e+00 1164.0
2 TraesCS5D01G065100 chr5D 94.674 751 35 5 1 750 383320887 383320141 0.000000e+00 1160.0
3 TraesCS5D01G065100 chr5D 94.118 85 5 0 1886 1970 47024521 47024605 6.390000e-26 130.0
4 TraesCS5D01G065100 chr5D 87.395 119 6 2 7127 7245 284895066 284894957 2.300000e-25 128.0
5 TraesCS5D01G065100 chr5D 90.805 87 5 3 4194 4279 257806653 257806569 6.430000e-21 113.0
6 TraesCS5D01G065100 chr5D 94.737 57 3 0 7127 7183 76689278 76689222 1.080000e-13 89.8
7 TraesCS5D01G065100 chr5B 93.291 5888 261 55 1599 7411 70266275 70272103 0.000000e+00 8562.0
8 TraesCS5D01G065100 chr5B 89.141 838 48 16 791 1599 70265423 70266246 0.000000e+00 1003.0
9 TraesCS5D01G065100 chr5B 85.593 118 8 2 7127 7244 347653339 347653231 1.790000e-21 115.0
10 TraesCS5D01G065100 chr5B 92.593 81 5 1 4197 4277 363570267 363570346 1.790000e-21 115.0
11 TraesCS5D01G065100 chr5B 77.966 118 21 5 7127 7241 697830525 697830640 1.410000e-07 69.4
12 TraesCS5D01G065100 chr5A 94.084 5375 235 35 1511 6816 48895022 48889662 0.000000e+00 8087.0
13 TraesCS5D01G065100 chr5A 94.533 750 35 5 1 745 653659924 653659176 0.000000e+00 1153.0
14 TraesCS5D01G065100 chr5A 91.903 704 37 13 797 1494 48895760 48895071 0.000000e+00 966.0
15 TraesCS5D01G065100 chr5A 92.216 334 24 2 6777 7109 48889660 48889328 9.210000e-129 472.0
16 TraesCS5D01G065100 chr5A 84.783 322 35 6 7274 7587 48889207 48888892 2.120000e-80 311.0
17 TraesCS5D01G065100 chr5A 84.314 102 6 6 7127 7228 9841960 9841869 3.010000e-14 91.6
18 TraesCS5D01G065100 chr5A 93.333 45 1 2 7577 7621 48886340 48886298 1.830000e-06 65.8
19 TraesCS5D01G065100 chr3D 95.294 765 30 6 1 763 296183118 296182358 0.000000e+00 1208.0
20 TraesCS5D01G065100 chr3D 95.099 755 30 7 1 750 484120428 484119676 0.000000e+00 1182.0
21 TraesCS5D01G065100 chr1D 94.819 772 31 7 1 766 123106853 123106085 0.000000e+00 1195.0
22 TraesCS5D01G065100 chr1D 94.800 750 33 6 1 745 361400976 361400228 0.000000e+00 1164.0
23 TraesCS5D01G065100 chr1D 92.437 119 4 4 7289 7404 22883150 22883034 1.750000e-36 165.0
24 TraesCS5D01G065100 chr1D 89.600 125 12 1 7269 7393 22966345 22966222 2.930000e-34 158.0
25 TraesCS5D01G065100 chr1D 84.404 109 11 1 4201 4303 36626168 36626060 1.390000e-17 102.0
26 TraesCS5D01G065100 chr4D 94.667 750 33 6 1 746 25216718 25215972 0.000000e+00 1157.0
27 TraesCS5D01G065100 chr4D 93.182 88 4 2 1886 1972 231221879 231221793 2.300000e-25 128.0
28 TraesCS5D01G065100 chr3A 94.548 752 34 5 1 746 724701436 724702186 0.000000e+00 1155.0
29 TraesCS5D01G065100 chr7B 85.827 508 53 12 950 1452 532796966 532796473 9.020000e-144 521.0
30 TraesCS5D01G065100 chr7B 82.404 574 79 10 933 1505 86103990 86103438 1.530000e-131 481.0
31 TraesCS5D01G065100 chr3B 81.772 395 39 20 6455 6836 347923748 347924122 4.600000e-77 300.0
32 TraesCS5D01G065100 chr1A 91.176 136 9 3 7257 7392 24130913 24130781 1.740000e-41 182.0
33 TraesCS5D01G065100 chr1A 89.630 135 12 2 7257 7391 23970390 23970258 3.760000e-38 171.0
34 TraesCS5D01G065100 chr1B 89.706 136 12 1 7257 7392 39376524 39376391 1.050000e-38 172.0
35 TraesCS5D01G065100 chr1B 95.238 105 3 2 7289 7393 38911773 38911875 1.750000e-36 165.0
36 TraesCS5D01G065100 chr1B 84.810 158 17 5 7252 7404 39394490 39394335 1.360000e-32 152.0
37 TraesCS5D01G065100 chr1B 89.583 96 8 2 1875 1970 401618944 401619037 3.840000e-23 121.0
38 TraesCS5D01G065100 chr1B 85.593 118 8 2 7127 7244 319127253 319127145 1.790000e-21 115.0
39 TraesCS5D01G065100 chr1B 83.898 118 10 4 7127 7244 211323051 211322943 3.870000e-18 104.0
40 TraesCS5D01G065100 chr4B 93.182 88 6 0 1886 1973 270831755 270831668 6.390000e-26 130.0
41 TraesCS5D01G065100 chr4B 92.135 89 7 0 1886 1974 19727401 19727489 8.260000e-25 126.0
42 TraesCS5D01G065100 chr2D 93.182 88 6 0 1886 1973 175825026 175825113 6.390000e-26 130.0
43 TraesCS5D01G065100 chr2D 90.625 96 8 1 1875 1970 270480482 270480388 8.260000e-25 126.0
44 TraesCS5D01G065100 chr2D 90.909 88 8 0 4192 4279 574823543 574823630 1.380000e-22 119.0
45 TraesCS5D01G065100 chr2D 89.655 87 7 2 4194 4279 126951345 126951260 8.320000e-20 110.0
46 TraesCS5D01G065100 chr6D 91.954 87 6 1 4193 4279 464482308 464482223 3.840000e-23 121.0
47 TraesCS5D01G065100 chr7D 85.593 118 8 6 7127 7244 60673907 60673799 1.790000e-21 115.0
48 TraesCS5D01G065100 chr2B 84.956 113 10 2 4197 4303 550810425 550810536 2.990000e-19 108.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G065100 chr5D 60471099 60478939 7840 True 14480.00 14480 100.0000 1 7841 1 chr5D.!!$R1 7840
1 TraesCS5D01G065100 chr5D 565348108 565348852 744 False 1164.00 1164 94.9130 3 746 1 chr5D.!!$F2 743
2 TraesCS5D01G065100 chr5D 383320141 383320887 746 True 1160.00 1160 94.6740 1 750 1 chr5D.!!$R5 749
3 TraesCS5D01G065100 chr5B 70265423 70272103 6680 False 4782.50 8562 91.2160 791 7411 2 chr5B.!!$F3 6620
4 TraesCS5D01G065100 chr5A 48886298 48895760 9462 True 1980.36 8087 91.2638 797 7621 5 chr5A.!!$R3 6824
5 TraesCS5D01G065100 chr5A 653659176 653659924 748 True 1153.00 1153 94.5330 1 745 1 chr5A.!!$R2 744
6 TraesCS5D01G065100 chr3D 296182358 296183118 760 True 1208.00 1208 95.2940 1 763 1 chr3D.!!$R1 762
7 TraesCS5D01G065100 chr3D 484119676 484120428 752 True 1182.00 1182 95.0990 1 750 1 chr3D.!!$R2 749
8 TraesCS5D01G065100 chr1D 123106085 123106853 768 True 1195.00 1195 94.8190 1 766 1 chr1D.!!$R4 765
9 TraesCS5D01G065100 chr1D 361400228 361400976 748 True 1164.00 1164 94.8000 1 745 1 chr1D.!!$R5 744
10 TraesCS5D01G065100 chr4D 25215972 25216718 746 True 1157.00 1157 94.6670 1 746 1 chr4D.!!$R1 745
11 TraesCS5D01G065100 chr3A 724701436 724702186 750 False 1155.00 1155 94.5480 1 746 1 chr3A.!!$F1 745
12 TraesCS5D01G065100 chr7B 86103438 86103990 552 True 481.00 481 82.4040 933 1505 1 chr7B.!!$R1 572

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
725 742 0.317770 GTGATGTGCAAACACCCACG 60.318 55.000 7.62 0.00 46.86 4.94 F
1506 1531 0.099436 GGTTGTGCTGATTGCCGATC 59.901 55.000 0.00 0.00 42.00 3.69 F
1508 1533 0.804364 TTGTGCTGATTGCCGATCAC 59.196 50.000 0.00 0.00 39.83 3.06 F
1548 1605 1.191489 TCCTGCATTCAGTCCCGTCA 61.191 55.000 0.00 0.00 38.66 4.35 F
3152 3263 0.107263 TTGGTGAAGCTGCTGTGTCA 60.107 50.000 1.35 0.00 0.00 3.58 F
3650 3772 1.296727 GGATAGCCTTGTAACCACGC 58.703 55.000 0.00 0.00 0.00 5.34 F
4533 4676 1.468565 CCAGGACATGCATTTGAAGCG 60.469 52.381 0.00 0.00 33.85 4.68 F
6115 6260 0.325602 GGATGGGGTACACGTGGAAA 59.674 55.000 21.57 1.53 0.00 3.13 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1776 1863 0.809241 CCTCGGATTCACAGAGCTGC 60.809 60.000 0.00 0.0 39.00 5.25 R
3097 3208 0.311790 AGTTGTCACATTTGGCTGCG 59.688 50.000 0.00 0.0 0.00 5.18 R
3152 3263 0.898320 AGTATGTCACCTTCGCAGCT 59.102 50.000 0.00 0.0 0.00 4.24 R
3546 3661 5.540911 ACATGTTATTCCACCTTTTTGCAG 58.459 37.500 0.00 0.0 0.00 4.41 R
4775 4918 0.106918 TGCGACTTTCACCCCAAACT 60.107 50.000 0.00 0.0 0.00 2.66 R
5378 5523 1.719780 GAAAGCGTCTTGTCACCTACG 59.280 52.381 0.00 0.0 38.34 3.51 R
6239 6384 0.167470 CGCCTTCACAACATGCTGAG 59.833 55.000 2.44 0.0 0.00 3.35 R
7678 10556 0.316360 TTTTCGGCAAACTTCGACGC 60.316 50.000 0.00 0.0 34.99 5.19 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
135 136 7.455641 GAGATCTTCGAAACTAGATCCCATA 57.544 40.000 17.33 0.00 45.05 2.74
207 213 6.183360 TGCATATGAATTGCCATGGTGTTTAT 60.183 34.615 14.67 10.28 39.39 1.40
290 296 9.463902 TGACATTTATAAAACGGGGAATTAAGA 57.536 29.630 1.21 0.00 0.00 2.10
351 357 5.559427 TGATACATGCACGTAAAATTGCT 57.441 34.783 0.00 0.00 39.62 3.91
440 447 9.995003 AAATTGCCATGATCTACAAACTAAAAA 57.005 25.926 0.00 0.00 0.00 1.94
443 450 8.121305 TGCCATGATCTACAAACTAAAAATGT 57.879 30.769 0.00 0.00 0.00 2.71
639 656 9.353999 GAGATACAACATTTTTAAGCCGAAAAT 57.646 29.630 0.00 0.00 37.22 1.82
640 657 9.705290 AGATACAACATTTTTAAGCCGAAAATT 57.295 25.926 0.00 0.00 35.21 1.82
684 701 7.713073 TGTCATCTATTCATACGTGGCAAAATA 59.287 33.333 0.00 0.00 0.00 1.40
707 724 1.188219 AGTGATGGAGGCGTGTGAGT 61.188 55.000 0.00 0.00 0.00 3.41
719 736 1.330213 CGTGTGAGTGATGTGCAAACA 59.670 47.619 0.00 0.00 0.00 2.83
725 742 0.317770 GTGATGTGCAAACACCCACG 60.318 55.000 7.62 0.00 46.86 4.94
783 800 7.297936 TGAGAATAAACTACAAGGTCAGACA 57.702 36.000 2.17 0.00 0.00 3.41
784 801 7.378966 TGAGAATAAACTACAAGGTCAGACAG 58.621 38.462 2.17 0.00 0.00 3.51
785 802 7.015292 TGAGAATAAACTACAAGGTCAGACAGT 59.985 37.037 2.17 0.46 0.00 3.55
786 803 7.155328 AGAATAAACTACAAGGTCAGACAGTG 58.845 38.462 2.17 2.05 0.00 3.66
787 804 6.665992 ATAAACTACAAGGTCAGACAGTGA 57.334 37.500 2.17 0.00 0.00 3.41
788 805 5.552870 AAACTACAAGGTCAGACAGTGAT 57.447 39.130 2.17 0.00 37.56 3.06
789 806 5.552870 AACTACAAGGTCAGACAGTGATT 57.447 39.130 2.17 0.00 37.56 2.57
790 807 5.552870 ACTACAAGGTCAGACAGTGATTT 57.447 39.130 2.17 0.00 37.56 2.17
791 808 5.542779 ACTACAAGGTCAGACAGTGATTTC 58.457 41.667 2.17 0.00 37.56 2.17
792 809 3.393800 ACAAGGTCAGACAGTGATTTCG 58.606 45.455 2.17 0.00 37.56 3.46
793 810 3.181465 ACAAGGTCAGACAGTGATTTCGT 60.181 43.478 2.17 0.00 37.56 3.85
794 811 3.305398 AGGTCAGACAGTGATTTCGTC 57.695 47.619 2.17 0.00 37.56 4.20
795 812 2.028930 AGGTCAGACAGTGATTTCGTCC 60.029 50.000 2.17 0.00 37.56 4.79
849 866 2.048784 ACTCGTCGTCTCGTCCGA 60.049 61.111 0.00 0.00 32.90 4.55
1093 1116 1.625565 AGGCTCCTCTCCTCCTCCT 60.626 63.158 0.00 0.00 0.00 3.69
1094 1117 1.152546 GGCTCCTCTCCTCCTCCTC 60.153 68.421 0.00 0.00 0.00 3.71
1095 1118 1.655114 GGCTCCTCTCCTCCTCCTCT 61.655 65.000 0.00 0.00 0.00 3.69
1097 1120 0.468029 CTCCTCTCCTCCTCCTCTGC 60.468 65.000 0.00 0.00 0.00 4.26
1098 1121 1.457455 CCTCTCCTCCTCCTCTGCC 60.457 68.421 0.00 0.00 0.00 4.85
1101 1124 4.465446 TCCTCCTCCTCTGCCCCG 62.465 72.222 0.00 0.00 0.00 5.73
1103 1126 4.465446 CTCCTCCTCTGCCCCGGA 62.465 72.222 0.73 0.00 0.00 5.14
1359 1382 2.887360 GGCGCCAAGGTACTACGA 59.113 61.111 24.80 0.00 38.49 3.43
1365 1388 2.648059 GCCAAGGTACTACGACTCCTA 58.352 52.381 0.00 0.00 38.49 2.94
1425 1448 2.280457 GGATCAGCTAGCACCGCC 60.280 66.667 18.83 9.15 0.00 6.13
1446 1469 0.173481 TGCTGCTCTGTACGCTTAGG 59.827 55.000 0.00 0.00 0.00 2.69
1452 1476 2.944349 GCTCTGTACGCTTAGGTAGTCT 59.056 50.000 0.00 0.00 0.00 3.24
1463 1487 4.499183 CTTAGGTAGTCTGTTGCTTGGAG 58.501 47.826 0.00 0.00 0.00 3.86
1470 1495 1.141657 TCTGTTGCTTGGAGTTCTGCT 59.858 47.619 0.00 0.00 0.00 4.24
1481 1506 4.742201 TTCTGCTCCTGACGCGCC 62.742 66.667 5.73 0.00 0.00 6.53
1502 1527 1.588082 CTGGGTTGTGCTGATTGCC 59.412 57.895 0.00 0.00 42.00 4.52
1506 1531 0.099436 GGTTGTGCTGATTGCCGATC 59.901 55.000 0.00 0.00 42.00 3.69
1508 1533 0.804364 TTGTGCTGATTGCCGATCAC 59.196 50.000 0.00 0.00 39.83 3.06
1509 1534 1.349627 GTGCTGATTGCCGATCACG 59.650 57.895 0.00 0.00 39.83 4.35
1533 1590 2.787249 CTTTGCGATGCGGTCCTG 59.213 61.111 0.00 0.00 0.00 3.86
1545 1602 1.450312 GGTCCTGCATTCAGTCCCG 60.450 63.158 0.00 0.00 38.66 5.14
1548 1605 1.191489 TCCTGCATTCAGTCCCGTCA 61.191 55.000 0.00 0.00 38.66 4.35
1552 1609 1.271325 TGCATTCAGTCCCGTCACAAT 60.271 47.619 0.00 0.00 0.00 2.71
1562 1619 1.402720 CCCGTCACAATTGTCCAATGC 60.403 52.381 8.48 0.00 0.00 3.56
1567 1624 2.884012 TCACAATTGTCCAATGCTCGTT 59.116 40.909 8.48 0.00 0.00 3.85
1568 1625 3.058293 TCACAATTGTCCAATGCTCGTTC 60.058 43.478 8.48 0.00 0.00 3.95
1585 1642 5.004535 GCTCGTTCTTCGTTAGGATTAACAG 59.995 44.000 0.00 0.00 39.29 3.16
1621 1707 9.422681 AGCTACTGATTATTACTTCTGGACTAA 57.577 33.333 0.00 0.00 0.00 2.24
1645 1732 4.202101 TGCATTCTTGGTTTTGGTGTACAG 60.202 41.667 0.00 0.00 0.00 2.74
1663 1750 4.605640 ACAGTTGCCAATTTATGTGCTT 57.394 36.364 0.00 0.00 0.00 3.91
1971 2066 9.924650 CTTACATTTAGAAACAGTGGTAGTACT 57.075 33.333 0.00 0.00 0.00 2.73
2178 2275 2.208640 TGGAGGGGGCAAGGTACA 59.791 61.111 0.00 0.00 0.00 2.90
2538 2635 7.121168 GTCCAGGTAACATTCTGATTTCATTCA 59.879 37.037 0.00 0.00 41.41 2.57
2573 2670 3.434319 CAATGCGCGCAGGTCCTT 61.434 61.111 38.44 24.67 0.00 3.36
2574 2671 2.106074 CAATGCGCGCAGGTCCTTA 61.106 57.895 38.44 13.50 0.00 2.69
2685 2786 6.524101 TTTGTTTGCTCCTTCTTGTTAGTT 57.476 33.333 0.00 0.00 0.00 2.24
2688 2789 5.065988 TGTTTGCTCCTTCTTGTTAGTTGTC 59.934 40.000 0.00 0.00 0.00 3.18
2696 2797 5.409826 CCTTCTTGTTAGTTGTCACTCCATC 59.590 44.000 0.00 0.00 34.06 3.51
2907 3018 3.831333 ACATGAATGGTTAATGTGGCACA 59.169 39.130 24.36 24.36 33.37 4.57
2966 3077 5.854010 ATGCTATTCACCTTTACGAGAGA 57.146 39.130 0.00 0.00 0.00 3.10
3027 3138 2.175236 GCACCAGCTGTAAGGCTTC 58.825 57.895 13.81 0.00 41.00 3.86
3035 3146 4.141711 CCAGCTGTAAGGCTTCATTACCTA 60.142 45.833 13.81 0.00 41.00 3.08
3057 3168 3.838565 TCAATGCCACTGTTTCCCTTTA 58.161 40.909 0.00 0.00 0.00 1.85
3097 3208 6.407475 ACGTTTACGGTTTATGTATTGACC 57.593 37.500 7.24 0.00 44.95 4.02
3126 3237 1.948104 TGTGACAACTGAGTTTCGGG 58.052 50.000 0.00 0.00 0.00 5.14
3152 3263 0.107263 TTGGTGAAGCTGCTGTGTCA 60.107 50.000 1.35 0.00 0.00 3.58
3250 3361 8.289618 TCTTATGTTTTCAGTTCATTACACTGC 58.710 33.333 0.00 0.00 41.37 4.40
3546 3661 7.436080 GCTTTAGTACCTTGTAAAACCCAAAAC 59.564 37.037 0.00 0.00 0.00 2.43
3551 3673 4.020128 ACCTTGTAAAACCCAAAACTGCAA 60.020 37.500 0.00 0.00 0.00 4.08
3565 3687 6.238347 CCAAAACTGCAAAAAGGTGGAATAAC 60.238 38.462 0.00 0.00 0.00 1.89
3575 3697 8.887717 CAAAAAGGTGGAATAACATGTTCAAAA 58.112 29.630 15.85 0.00 0.00 2.44
3650 3772 1.296727 GGATAGCCTTGTAACCACGC 58.703 55.000 0.00 0.00 0.00 5.34
3753 3877 3.769844 ACCCAGTAACAGAGATGATCGTT 59.230 43.478 0.00 0.00 0.00 3.85
3799 3923 1.967319 ACGTGTTGCAAATGGAGAGT 58.033 45.000 0.00 0.00 0.00 3.24
3873 3997 4.495349 GCATTCATGTTCTCATCCTCAACG 60.495 45.833 0.00 0.00 31.15 4.10
3912 4036 5.821470 AGCTTCATCACATAACCATCTCTTG 59.179 40.000 0.00 0.00 0.00 3.02
4131 4264 5.952387 TCCAGAAGAGAAAAGGAATCCAAA 58.048 37.500 0.61 0.00 0.00 3.28
4146 4279 5.882557 GGAATCCAAACATTCTCTAGAAGCA 59.117 40.000 0.00 0.00 37.48 3.91
4243 4376 6.998673 AGCACCCAGGACATATTTTTATAGAC 59.001 38.462 0.00 0.00 0.00 2.59
4533 4676 1.468565 CCAGGACATGCATTTGAAGCG 60.469 52.381 0.00 0.00 33.85 4.68
4642 4785 8.917088 CAACAGGTAATTTTTGGAGATATCCAT 58.083 33.333 10.49 0.00 39.86 3.41
4679 4822 4.716794 ACCAGTTATTTTTCGGTGTGGTA 58.283 39.130 0.00 0.00 35.27 3.25
4775 4918 4.853468 TCCCATGATAGCCAAACTTGTA 57.147 40.909 0.00 0.00 0.00 2.41
4829 4972 5.880332 AGTCAAGCTAAAGAACTGTTTGTCA 59.120 36.000 0.00 0.00 0.00 3.58
4956 5099 9.758651 ATTAATTATTAATTTTTCCACGAGCCC 57.241 29.630 6.95 0.00 32.06 5.19
5209 5353 2.112190 AGTACTTCTGCTAAGGCCTCC 58.888 52.381 5.23 0.00 37.74 4.30
5338 5482 6.090483 TGTCCTTTTGTTTTGTCACTCAAA 57.910 33.333 0.00 0.00 43.24 2.69
5354 5498 7.040132 TGTCACTCAAACAACATTGGCAATATA 60.040 33.333 13.23 0.00 0.00 0.86
5355 5499 7.273381 GTCACTCAAACAACATTGGCAATATAC 59.727 37.037 13.23 0.00 0.00 1.47
5356 5500 7.176515 TCACTCAAACAACATTGGCAATATACT 59.823 33.333 13.23 0.00 0.00 2.12
5589 5734 9.678941 CAGAACCTCTTATACTTTTGGTTTTTC 57.321 33.333 0.00 0.00 37.83 2.29
5636 5781 5.932303 TCTTTGCTGAGGTGTGAATACTAAC 59.068 40.000 0.00 0.00 0.00 2.34
5688 5833 2.162681 CTCATTGTTCCCCTTGTGACC 58.837 52.381 0.00 0.00 0.00 4.02
5973 6118 1.935873 CACCATCATTACAGGCAGACG 59.064 52.381 0.00 0.00 0.00 4.18
6115 6260 0.325602 GGATGGGGTACACGTGGAAA 59.674 55.000 21.57 1.53 0.00 3.13
6138 6283 2.092968 TGGTCAGCCTGTCATGGTTATC 60.093 50.000 0.00 0.00 35.27 1.75
6160 6305 3.681034 CGAAGCAATGAAGATGGAGGTCT 60.681 47.826 0.00 0.00 0.00 3.85
6164 6309 4.012374 GCAATGAAGATGGAGGTCTGAAA 58.988 43.478 0.00 0.00 0.00 2.69
6165 6310 4.460382 GCAATGAAGATGGAGGTCTGAAAA 59.540 41.667 0.00 0.00 0.00 2.29
6190 6335 4.887071 ACTTGCTGATGGTGTCTTGTAAAA 59.113 37.500 0.00 0.00 0.00 1.52
6218 6363 8.692110 TTGATCAAATTAATCAATGCTGACAC 57.308 30.769 5.45 0.00 38.02 3.67
6239 6384 7.226720 TGACACAACTCTCTTGTATTCCTTTTC 59.773 37.037 0.00 0.00 0.00 2.29
6246 6391 6.715280 TCTCTTGTATTCCTTTTCTCAGCAT 58.285 36.000 0.00 0.00 0.00 3.79
6282 6427 4.087182 CTCGGGCAGGTTATATAGAAGGA 58.913 47.826 0.00 0.00 0.00 3.36
6422 6567 4.905429 ACAAAGTGTATGCCATGTCTACA 58.095 39.130 0.00 0.00 0.00 2.74
6427 6572 5.744171 AGTGTATGCCATGTCTACATTTGA 58.256 37.500 0.00 0.00 33.61 2.69
6428 6573 5.819379 AGTGTATGCCATGTCTACATTTGAG 59.181 40.000 0.00 0.00 33.61 3.02
6429 6574 5.817296 GTGTATGCCATGTCTACATTTGAGA 59.183 40.000 0.00 0.00 33.61 3.27
6449 6598 9.928618 TTTGAGAATATATTTTGTCCCATACCA 57.071 29.630 0.00 0.00 0.00 3.25
6489 6638 7.118496 AGTATTCACACCTAGAAGATTGGAG 57.882 40.000 0.00 0.00 0.00 3.86
6490 6639 6.670027 AGTATTCACACCTAGAAGATTGGAGT 59.330 38.462 0.00 0.00 0.00 3.85
6491 6640 7.839705 AGTATTCACACCTAGAAGATTGGAGTA 59.160 37.037 0.00 0.00 0.00 2.59
6499 6648 8.454106 CACCTAGAAGATTGGAGTAATTTGTTG 58.546 37.037 0.00 0.00 0.00 3.33
6520 6669 8.770438 TGTTGCCATTTATGTAAAATTTCTCC 57.230 30.769 0.00 0.00 0.00 3.71
6527 6676 9.708222 CATTTATGTAAAATTTCTCCGTCTCTG 57.292 33.333 0.00 0.00 0.00 3.35
6529 6678 8.703604 TTATGTAAAATTTCTCCGTCTCTGAG 57.296 34.615 0.00 0.00 0.00 3.35
6568 6717 7.275779 ACAGTAGTGTTCGACAATGTGAATATC 59.724 37.037 0.00 0.00 30.30 1.63
6578 6727 9.430623 TCGACAATGTGAATATCTTGAGTTAAA 57.569 29.630 0.00 0.00 0.00 1.52
6596 6745 5.826208 AGTTAAAAGAAACAGTGGTGGTAGG 59.174 40.000 0.00 0.00 0.00 3.18
6600 6749 1.980036 GAAACAGTGGTGGTAGGGGTA 59.020 52.381 0.00 0.00 0.00 3.69
6630 6780 1.904032 CTCCTGGAGGCTGGAGTTC 59.096 63.158 16.19 0.00 43.49 3.01
6634 6784 0.401738 CTGGAGGCTGGAGTTCCAAA 59.598 55.000 1.99 0.00 46.97 3.28
6715 6868 8.480643 AATAAAATCAAACGTCTCAGGAGTAG 57.519 34.615 0.00 0.00 0.00 2.57
6725 6878 5.007823 ACGTCTCAGGAGTAGATAATGTTCG 59.992 44.000 0.00 0.00 0.00 3.95
6732 6885 7.224753 TCAGGAGTAGATAATGTTCGCATTTTC 59.775 37.037 0.00 1.25 44.77 2.29
6751 6904 0.673437 CCAACACCGGAAAATGTGCT 59.327 50.000 9.46 0.00 35.90 4.40
6753 6906 0.673437 AACACCGGAAAATGTGCTGG 59.327 50.000 9.46 0.00 35.90 4.85
6783 6941 9.063615 TCAGTATACAACTATAATCGCTTCTCA 57.936 33.333 5.50 0.00 35.76 3.27
6805 6963 2.493278 GGTGATTCCCCATCAACTTGTG 59.507 50.000 0.00 0.00 45.26 3.33
6836 7036 4.478206 TTCTCCAGGATAAGAGCACAAG 57.522 45.455 0.00 0.00 0.00 3.16
6875 7075 5.378230 TTGGAGCCACATATCAGAATTCT 57.622 39.130 0.88 0.88 0.00 2.40
6948 7148 9.551734 TGGAGATCATTCTGTGACTAAATAATG 57.448 33.333 0.00 0.00 40.28 1.90
6961 7161 8.364142 GTGACTAAATAATGCTAGGTGATCTCT 58.636 37.037 0.00 0.00 0.00 3.10
7018 7218 5.405571 CCATTTCCTGTATAGCGTGTACATC 59.594 44.000 0.00 0.00 32.13 3.06
7038 7238 0.241749 AATGTCAGTGGCATTGTGCG 59.758 50.000 21.82 0.00 46.21 5.34
7045 7245 2.095314 CAGTGGCATTGTGCGATGTAAA 60.095 45.455 1.24 0.00 46.21 2.01
7070 7270 5.718649 ATCATGTGAGTATGTAACGCAAC 57.281 39.130 0.00 0.00 39.78 4.17
7074 7274 3.185594 TGTGAGTATGTAACGCAACTTGC 59.814 43.478 3.44 3.44 39.78 4.01
7084 7284 2.049802 CAACTTGCCTGCCTTGCG 60.050 61.111 0.00 0.00 0.00 4.85
7119 7319 7.424738 CGTGAATCTTCTTGATTGAGAAATTCG 59.575 37.037 0.00 0.00 44.70 3.34
7140 7340 3.670055 CGATGATCCAACAACAACAAAGC 59.330 43.478 0.00 0.00 0.00 3.51
7149 7349 6.048509 CCAACAACAACAAAGCCTTTAATCT 58.951 36.000 0.00 0.00 0.00 2.40
7162 7362 5.011023 AGCCTTTAATCTCAAACAAGTTGGG 59.989 40.000 7.96 0.00 39.30 4.12
7165 7365 6.492087 CCTTTAATCTCAAACAAGTTGGGGTA 59.508 38.462 7.96 0.00 38.37 3.69
7174 7374 2.188817 CAAGTTGGGGTAGGCTAGAGT 58.811 52.381 0.00 0.00 0.00 3.24
7175 7375 2.572104 CAAGTTGGGGTAGGCTAGAGTT 59.428 50.000 0.00 0.00 0.00 3.01
7180 7380 2.838202 TGGGGTAGGCTAGAGTTGAAAG 59.162 50.000 0.00 0.00 0.00 2.62
7181 7381 2.420269 GGGGTAGGCTAGAGTTGAAAGC 60.420 54.545 0.00 0.00 35.47 3.51
7198 7398 5.826643 TGAAAGCCTAACACCCATAAGATT 58.173 37.500 0.00 0.00 0.00 2.40
7209 7409 5.646360 ACACCCATAAGATTTCGTAACCAAG 59.354 40.000 0.00 0.00 0.00 3.61
7223 7423 3.963733 CCAAGCTCATGGTTCTGGA 57.036 52.632 0.00 0.00 35.65 3.86
7244 7478 4.754114 GGAACATGGATAGCTAGCTTTCAG 59.246 45.833 28.91 21.48 0.00 3.02
7251 7485 6.109359 TGGATAGCTAGCTTTCAGAAGTTTC 58.891 40.000 28.91 14.25 35.25 2.78
7284 7560 5.604010 GCTAGAGCTGCAATTTAGGTATG 57.396 43.478 1.02 0.00 38.21 2.39
7287 7563 4.202441 AGAGCTGCAATTTAGGTATGGTG 58.798 43.478 1.02 0.00 0.00 4.17
7288 7564 4.080356 AGAGCTGCAATTTAGGTATGGTGA 60.080 41.667 1.02 0.00 0.00 4.02
7299 7575 7.875327 TTTAGGTATGGTGAAAAGAATAGGC 57.125 36.000 0.00 0.00 0.00 3.93
7387 7695 1.134220 GGGCTGGACGACAATGGATTA 60.134 52.381 0.00 0.00 0.00 1.75
7395 7703 5.943416 TGGACGACAATGGATTAGTGAAATT 59.057 36.000 0.00 0.00 0.00 1.82
7396 7704 6.128035 TGGACGACAATGGATTAGTGAAATTG 60.128 38.462 0.00 0.00 34.99 2.32
7397 7705 6.128007 GGACGACAATGGATTAGTGAAATTGT 60.128 38.462 0.00 0.00 42.53 2.71
7414 7722 7.333672 GTGAAATTGTAGGATTAGGTTCGAACT 59.666 37.037 26.32 15.23 0.00 3.01
7418 7726 5.717119 TGTAGGATTAGGTTCGAACTTGAC 58.283 41.667 26.32 14.42 0.00 3.18
7420 7728 5.223449 AGGATTAGGTTCGAACTTGACAA 57.777 39.130 26.32 11.84 0.00 3.18
7422 7730 5.469084 AGGATTAGGTTCGAACTTGACAAAC 59.531 40.000 26.32 10.04 0.00 2.93
7426 7734 2.861935 GGTTCGAACTTGACAAACTCGA 59.138 45.455 26.32 14.20 36.80 4.04
7430 7738 4.556233 TCGAACTTGACAAACTCGATGAT 58.444 39.130 14.20 0.00 33.87 2.45
7439 7747 4.836825 ACAAACTCGATGATCCAGAATGT 58.163 39.130 0.00 0.00 0.00 2.71
7447 7755 7.390440 ACTCGATGATCCAGAATGTTGTTTTTA 59.610 33.333 0.00 0.00 0.00 1.52
7448 7756 8.279970 TCGATGATCCAGAATGTTGTTTTTAT 57.720 30.769 0.00 0.00 0.00 1.40
7449 7757 9.389755 TCGATGATCCAGAATGTTGTTTTTATA 57.610 29.630 0.00 0.00 0.00 0.98
7523 7832 8.824159 TTTGATAATTTTCTTGGAAATGCGAA 57.176 26.923 0.00 0.00 30.06 4.70
7569 7878 9.678260 TTTTCTTTTTGGAAAATGAGGATCAAA 57.322 25.926 0.00 0.00 39.91 2.69
7609 10487 6.326583 ACAAGCTAATCACAGTAGGCCTATAA 59.673 38.462 17.38 0.00 0.00 0.98
7614 10492 6.500589 AATCACAGTAGGCCTATAACACAT 57.499 37.500 17.38 1.60 0.00 3.21
7616 10494 7.612065 ATCACAGTAGGCCTATAACACATAA 57.388 36.000 17.38 0.00 0.00 1.90
7617 10495 7.426606 TCACAGTAGGCCTATAACACATAAA 57.573 36.000 17.38 0.00 0.00 1.40
7618 10496 8.029782 TCACAGTAGGCCTATAACACATAAAT 57.970 34.615 17.38 0.00 0.00 1.40
7619 10497 8.148351 TCACAGTAGGCCTATAACACATAAATC 58.852 37.037 17.38 0.00 0.00 2.17
7620 10498 7.931407 CACAGTAGGCCTATAACACATAAATCA 59.069 37.037 17.38 0.00 0.00 2.57
7621 10499 7.931948 ACAGTAGGCCTATAACACATAAATCAC 59.068 37.037 17.38 0.00 0.00 3.06
7622 10500 8.150945 CAGTAGGCCTATAACACATAAATCACT 58.849 37.037 17.38 1.36 0.00 3.41
7623 10501 8.368668 AGTAGGCCTATAACACATAAATCACTC 58.631 37.037 17.38 0.00 0.00 3.51
7624 10502 6.223852 AGGCCTATAACACATAAATCACTCG 58.776 40.000 1.29 0.00 0.00 4.18
7625 10503 6.041637 AGGCCTATAACACATAAATCACTCGA 59.958 38.462 1.29 0.00 0.00 4.04
7626 10504 6.704493 GGCCTATAACACATAAATCACTCGAA 59.296 38.462 0.00 0.00 0.00 3.71
7627 10505 7.387948 GGCCTATAACACATAAATCACTCGAAT 59.612 37.037 0.00 0.00 0.00 3.34
7628 10506 9.419297 GCCTATAACACATAAATCACTCGAATA 57.581 33.333 0.00 0.00 0.00 1.75
7641 10519 8.824159 AATCACTCGAATATAATCTTGGACTG 57.176 34.615 0.00 0.00 0.00 3.51
7642 10520 7.348080 TCACTCGAATATAATCTTGGACTGT 57.652 36.000 0.00 0.00 0.00 3.55
7643 10521 7.782049 TCACTCGAATATAATCTTGGACTGTT 58.218 34.615 0.00 0.00 0.00 3.16
7644 10522 7.706607 TCACTCGAATATAATCTTGGACTGTTG 59.293 37.037 0.00 0.00 0.00 3.33
7645 10523 6.986817 ACTCGAATATAATCTTGGACTGTTGG 59.013 38.462 0.00 0.00 0.00 3.77
7646 10524 6.288294 TCGAATATAATCTTGGACTGTTGGG 58.712 40.000 0.00 0.00 0.00 4.12
7647 10525 6.099125 TCGAATATAATCTTGGACTGTTGGGA 59.901 38.462 0.00 0.00 0.00 4.37
7648 10526 6.202954 CGAATATAATCTTGGACTGTTGGGAC 59.797 42.308 0.00 0.00 0.00 4.46
7649 10527 6.831664 ATATAATCTTGGACTGTTGGGACT 57.168 37.500 0.00 0.00 0.00 3.85
7650 10528 7.931015 ATATAATCTTGGACTGTTGGGACTA 57.069 36.000 0.00 0.00 0.00 2.59
7651 10529 4.993705 AATCTTGGACTGTTGGGACTAA 57.006 40.909 0.00 0.00 0.00 2.24
7652 10530 4.993705 ATCTTGGACTGTTGGGACTAAA 57.006 40.909 0.00 0.00 0.00 1.85
7653 10531 4.781775 TCTTGGACTGTTGGGACTAAAA 57.218 40.909 0.00 0.00 0.00 1.52
7654 10532 5.319043 TCTTGGACTGTTGGGACTAAAAT 57.681 39.130 0.00 0.00 0.00 1.82
7655 10533 5.701224 TCTTGGACTGTTGGGACTAAAATT 58.299 37.500 0.00 0.00 0.00 1.82
7656 10534 5.534654 TCTTGGACTGTTGGGACTAAAATTG 59.465 40.000 0.00 0.00 0.00 2.32
7657 10535 3.572255 TGGACTGTTGGGACTAAAATTGC 59.428 43.478 0.00 0.00 0.00 3.56
7658 10536 3.572255 GGACTGTTGGGACTAAAATTGCA 59.428 43.478 0.00 0.00 0.00 4.08
7659 10537 4.038642 GGACTGTTGGGACTAAAATTGCAA 59.961 41.667 0.00 0.00 0.00 4.08
7660 10538 5.200368 ACTGTTGGGACTAAAATTGCAAG 57.800 39.130 4.94 0.00 0.00 4.01
7661 10539 4.892934 ACTGTTGGGACTAAAATTGCAAGA 59.107 37.500 4.94 0.00 0.00 3.02
7662 10540 5.362430 ACTGTTGGGACTAAAATTGCAAGAA 59.638 36.000 4.94 0.00 0.00 2.52
7663 10541 6.127196 ACTGTTGGGACTAAAATTGCAAGAAA 60.127 34.615 4.94 0.00 0.00 2.52
7664 10542 6.644347 TGTTGGGACTAAAATTGCAAGAAAA 58.356 32.000 4.94 0.00 0.00 2.29
7665 10543 6.760770 TGTTGGGACTAAAATTGCAAGAAAAG 59.239 34.615 4.94 2.76 0.00 2.27
7666 10544 6.723298 TGGGACTAAAATTGCAAGAAAAGA 57.277 33.333 4.94 0.00 0.00 2.52
7667 10545 7.118496 TGGGACTAAAATTGCAAGAAAAGAA 57.882 32.000 4.94 0.00 0.00 2.52
7668 10546 6.983890 TGGGACTAAAATTGCAAGAAAAGAAC 59.016 34.615 4.94 1.39 0.00 3.01
7669 10547 7.147742 TGGGACTAAAATTGCAAGAAAAGAACT 60.148 33.333 4.94 0.00 0.00 3.01
7670 10548 7.382488 GGGACTAAAATTGCAAGAAAAGAACTC 59.618 37.037 4.94 0.00 0.00 3.01
7671 10549 7.382488 GGACTAAAATTGCAAGAAAAGAACTCC 59.618 37.037 4.94 0.54 0.00 3.85
7672 10550 7.781056 ACTAAAATTGCAAGAAAAGAACTCCA 58.219 30.769 4.94 0.00 0.00 3.86
7673 10551 6.908870 AAAATTGCAAGAAAAGAACTCCAC 57.091 33.333 4.94 0.00 0.00 4.02
7674 10552 5.596836 AATTGCAAGAAAAGAACTCCACA 57.403 34.783 4.94 0.00 0.00 4.17
7675 10553 5.596836 ATTGCAAGAAAAGAACTCCACAA 57.403 34.783 4.94 0.00 0.00 3.33
7676 10554 5.596836 TTGCAAGAAAAGAACTCCACAAT 57.403 34.783 0.00 0.00 0.00 2.71
7677 10555 5.596836 TGCAAGAAAAGAACTCCACAATT 57.403 34.783 0.00 0.00 0.00 2.32
7678 10556 5.350633 TGCAAGAAAAGAACTCCACAATTG 58.649 37.500 3.24 3.24 0.00 2.32
7679 10557 4.209911 GCAAGAAAAGAACTCCACAATTGC 59.790 41.667 5.05 0.00 33.44 3.56
7680 10558 4.228912 AGAAAAGAACTCCACAATTGCG 57.771 40.909 5.05 0.00 0.00 4.85
7681 10559 3.632145 AGAAAAGAACTCCACAATTGCGT 59.368 39.130 5.05 0.00 0.00 5.24
7682 10560 3.626028 AAAGAACTCCACAATTGCGTC 57.374 42.857 5.05 0.00 0.00 5.19
7683 10561 1.148310 AGAACTCCACAATTGCGTCG 58.852 50.000 5.05 0.00 0.00 5.12
7684 10562 1.144969 GAACTCCACAATTGCGTCGA 58.855 50.000 5.05 0.00 0.00 4.20
7685 10563 1.529438 GAACTCCACAATTGCGTCGAA 59.471 47.619 5.05 0.00 0.00 3.71
7686 10564 1.148310 ACTCCACAATTGCGTCGAAG 58.852 50.000 5.05 0.00 0.00 3.79
7687 10565 1.148310 CTCCACAATTGCGTCGAAGT 58.852 50.000 5.05 0.00 0.00 3.01
7688 10566 1.531149 CTCCACAATTGCGTCGAAGTT 59.469 47.619 5.05 0.00 0.00 2.66
7689 10567 1.944024 TCCACAATTGCGTCGAAGTTT 59.056 42.857 5.05 0.00 0.00 2.66
7690 10568 2.043411 CCACAATTGCGTCGAAGTTTG 58.957 47.619 5.05 5.01 0.00 2.93
7691 10569 1.447938 CACAATTGCGTCGAAGTTTGC 59.552 47.619 5.05 0.00 0.00 3.68
7692 10570 1.052287 CAATTGCGTCGAAGTTTGCC 58.948 50.000 0.00 0.00 0.00 4.52
7693 10571 0.385473 AATTGCGTCGAAGTTTGCCG 60.385 50.000 0.00 0.00 0.00 5.69
7694 10572 1.225376 ATTGCGTCGAAGTTTGCCGA 61.225 50.000 0.00 0.00 0.00 5.54
7695 10573 1.429927 TTGCGTCGAAGTTTGCCGAA 61.430 50.000 0.00 0.00 36.50 4.30
7696 10574 1.277440 GCGTCGAAGTTTGCCGAAA 59.723 52.632 0.00 0.00 36.50 3.46
7697 10575 0.316360 GCGTCGAAGTTTGCCGAAAA 60.316 50.000 0.00 0.00 36.50 2.29
7705 10583 2.793278 GTTTGCCGAAAACCACTGAT 57.207 45.000 3.14 0.00 42.06 2.90
7706 10584 3.092334 GTTTGCCGAAAACCACTGATT 57.908 42.857 3.14 0.00 42.06 2.57
7707 10585 3.453424 GTTTGCCGAAAACCACTGATTT 58.547 40.909 3.14 0.00 42.06 2.17
7708 10586 3.810310 TTGCCGAAAACCACTGATTTT 57.190 38.095 0.00 0.00 31.96 1.82
7709 10587 3.363341 TGCCGAAAACCACTGATTTTC 57.637 42.857 0.00 0.00 40.92 2.29
7716 10594 6.068473 GAAAACCACTGATTTTCGGTTAGT 57.932 37.500 0.00 0.00 40.84 2.24
7717 10595 6.459670 AAAACCACTGATTTTCGGTTAGTT 57.540 33.333 0.00 0.00 40.84 2.24
7718 10596 6.459670 AAACCACTGATTTTCGGTTAGTTT 57.540 33.333 0.00 7.87 40.84 2.66
7719 10597 6.459670 AACCACTGATTTTCGGTTAGTTTT 57.540 33.333 0.00 0.00 39.94 2.43
7720 10598 6.459670 ACCACTGATTTTCGGTTAGTTTTT 57.540 33.333 0.00 0.00 32.75 1.94
7746 10624 9.467258 TTTTCTGAAAGCACTAAAATCTCATTG 57.533 29.630 2.75 0.00 0.00 2.82
7747 10625 7.984422 TCTGAAAGCACTAAAATCTCATTGA 57.016 32.000 0.00 0.00 0.00 2.57
7748 10626 8.037382 TCTGAAAGCACTAAAATCTCATTGAG 57.963 34.615 7.38 7.38 0.00 3.02
7749 10627 7.879677 TCTGAAAGCACTAAAATCTCATTGAGA 59.120 33.333 18.29 18.29 43.20 3.27
7750 10628 8.037382 TGAAAGCACTAAAATCTCATTGAGAG 57.963 34.615 20.35 9.81 42.26 3.20
7751 10629 6.434018 AAGCACTAAAATCTCATTGAGAGC 57.566 37.500 20.35 15.65 42.26 4.09
7752 10630 4.569966 AGCACTAAAATCTCATTGAGAGCG 59.430 41.667 20.35 9.72 42.26 5.03
7753 10631 4.331168 GCACTAAAATCTCATTGAGAGCGT 59.669 41.667 20.35 10.69 42.26 5.07
7754 10632 5.163814 GCACTAAAATCTCATTGAGAGCGTT 60.164 40.000 20.35 15.38 42.26 4.84
7755 10633 6.621596 GCACTAAAATCTCATTGAGAGCGTTT 60.622 38.462 20.35 19.45 42.26 3.60
7756 10634 7.301054 CACTAAAATCTCATTGAGAGCGTTTT 58.699 34.615 20.35 20.93 42.26 2.43
7757 10635 7.269937 CACTAAAATCTCATTGAGAGCGTTTTG 59.730 37.037 23.95 21.24 42.26 2.44
7758 10636 5.947228 AAATCTCATTGAGAGCGTTTTGA 57.053 34.783 20.35 0.00 42.26 2.69
7759 10637 5.947228 AATCTCATTGAGAGCGTTTTGAA 57.053 34.783 20.35 0.00 42.26 2.69
7760 10638 5.947228 ATCTCATTGAGAGCGTTTTGAAA 57.053 34.783 20.35 0.00 42.26 2.69
7761 10639 5.348418 TCTCATTGAGAGCGTTTTGAAAG 57.652 39.130 12.38 0.00 44.35 2.62
7762 10640 4.214119 TCTCATTGAGAGCGTTTTGAAAGG 59.786 41.667 12.38 0.00 44.35 3.11
7763 10641 4.133820 TCATTGAGAGCGTTTTGAAAGGA 58.866 39.130 0.74 0.00 0.00 3.36
7764 10642 4.578516 TCATTGAGAGCGTTTTGAAAGGAA 59.421 37.500 0.74 0.00 0.00 3.36
7765 10643 4.974368 TTGAGAGCGTTTTGAAAGGAAA 57.026 36.364 0.74 0.00 0.00 3.13
7766 10644 4.974368 TGAGAGCGTTTTGAAAGGAAAA 57.026 36.364 0.74 0.00 0.00 2.29
7767 10645 5.514274 TGAGAGCGTTTTGAAAGGAAAAT 57.486 34.783 0.74 0.00 0.00 1.82
7768 10646 5.901552 TGAGAGCGTTTTGAAAGGAAAATT 58.098 33.333 0.74 0.00 0.00 1.82
7769 10647 5.748152 TGAGAGCGTTTTGAAAGGAAAATTG 59.252 36.000 0.74 0.00 0.00 2.32
7770 10648 5.901552 AGAGCGTTTTGAAAGGAAAATTGA 58.098 33.333 0.74 0.00 0.00 2.57
7771 10649 5.748630 AGAGCGTTTTGAAAGGAAAATTGAC 59.251 36.000 0.74 0.00 0.00 3.18
7772 10650 5.415221 AGCGTTTTGAAAGGAAAATTGACA 58.585 33.333 0.74 0.00 0.00 3.58
7773 10651 5.872070 AGCGTTTTGAAAGGAAAATTGACAA 59.128 32.000 0.00 0.00 0.00 3.18
7774 10652 6.538381 AGCGTTTTGAAAGGAAAATTGACAAT 59.462 30.769 0.00 0.00 0.00 2.71
7775 10653 6.628461 GCGTTTTGAAAGGAAAATTGACAATG 59.372 34.615 0.34 0.00 0.00 2.82
7776 10654 7.125113 CGTTTTGAAAGGAAAATTGACAATGG 58.875 34.615 0.34 0.00 0.00 3.16
7777 10655 7.416817 GTTTTGAAAGGAAAATTGACAATGGG 58.583 34.615 0.34 0.00 0.00 4.00
7778 10656 5.226194 TGAAAGGAAAATTGACAATGGGG 57.774 39.130 0.34 0.00 0.00 4.96
7779 10657 3.701205 AAGGAAAATTGACAATGGGGC 57.299 42.857 0.34 0.00 0.00 5.80
7780 10658 1.908619 AGGAAAATTGACAATGGGGCC 59.091 47.619 0.34 0.00 0.00 5.80
7781 10659 1.065491 GGAAAATTGACAATGGGGCCC 60.065 52.381 18.17 18.17 0.00 5.80
7782 10660 0.612744 AAAATTGACAATGGGGCCCG 59.387 50.000 19.83 6.19 0.00 6.13
7783 10661 1.264045 AAATTGACAATGGGGCCCGG 61.264 55.000 19.83 12.76 0.00 5.73
7822 10700 4.035102 GGAAGGGGCGGCTGTTCT 62.035 66.667 9.56 0.00 0.00 3.01
7823 10701 2.747855 GAAGGGGCGGCTGTTCTG 60.748 66.667 9.56 0.00 0.00 3.02
7824 10702 4.351054 AAGGGGCGGCTGTTCTGG 62.351 66.667 9.56 0.00 0.00 3.86
7826 10704 4.344865 GGGGCGGCTGTTCTGGAA 62.345 66.667 9.56 0.00 0.00 3.53
7827 10705 2.747855 GGGCGGCTGTTCTGGAAG 60.748 66.667 9.56 0.00 0.00 3.46
7828 10706 2.347490 GGCGGCTGTTCTGGAAGA 59.653 61.111 0.00 0.00 44.68 2.87
7839 10717 2.317371 TCTGGAAGAGCTTCTGGAGT 57.683 50.000 9.82 0.00 38.67 3.85
7840 10718 3.458044 TCTGGAAGAGCTTCTGGAGTA 57.542 47.619 9.82 0.00 38.67 2.59
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
55 56 8.726988 TCTTCAATCGGATTTTTCGTTTAAGAT 58.273 29.630 0.00 0.00 0.00 2.40
207 213 6.883756 TGAAACATATCATGGCAACTTCAGTA 59.116 34.615 0.00 0.00 37.61 2.74
290 296 4.277476 TGGTTCATGACAAGTCCAGTTTT 58.723 39.130 0.00 0.00 0.00 2.43
296 302 7.681939 TTAGTTTATGGTTCATGACAAGTCC 57.318 36.000 0.00 0.00 0.00 3.85
379 386 3.788227 TGGCAACTCCAGTACTTTGAT 57.212 42.857 8.83 0.00 40.72 2.57
440 447 5.789643 AAACTAAAGTTGCCATGTGACAT 57.210 34.783 0.00 0.00 38.44 3.06
443 450 5.278758 GGCTTAAACTAAAGTTGCCATGTGA 60.279 40.000 14.54 0.00 41.51 3.58
479 486 4.144297 AGTTGCCATGATGTTTACACTGT 58.856 39.130 0.00 0.00 0.00 3.55
518 531 5.163488 ACCCTATGTTGATATGTTTCGACGA 60.163 40.000 0.00 0.00 33.42 4.20
538 551 4.773149 ACGAGATCTTCAAAACTAGACCCT 59.227 41.667 0.00 0.00 0.00 4.34
684 701 1.066858 CACACGCCTCCATCACTACTT 60.067 52.381 0.00 0.00 0.00 2.24
707 724 2.028936 CGTGGGTGTTTGCACATCA 58.971 52.632 0.00 0.00 46.95 3.07
725 742 2.125202 AAAAGCTAACGCCCACACGC 62.125 55.000 0.00 0.00 36.60 5.34
759 776 7.015292 ACTGTCTGACCTTGTAGTTTATTCTCA 59.985 37.037 5.17 0.00 0.00 3.27
762 779 7.152645 TCACTGTCTGACCTTGTAGTTTATTC 58.847 38.462 5.17 0.00 0.00 1.75
763 780 7.062749 TCACTGTCTGACCTTGTAGTTTATT 57.937 36.000 5.17 0.00 0.00 1.40
764 781 6.665992 TCACTGTCTGACCTTGTAGTTTAT 57.334 37.500 5.17 0.00 0.00 1.40
765 782 6.665992 ATCACTGTCTGACCTTGTAGTTTA 57.334 37.500 5.17 0.00 0.00 2.01
766 783 5.552870 ATCACTGTCTGACCTTGTAGTTT 57.447 39.130 5.17 0.00 0.00 2.66
767 784 5.552870 AATCACTGTCTGACCTTGTAGTT 57.447 39.130 5.17 0.00 0.00 2.24
768 785 5.542779 GAAATCACTGTCTGACCTTGTAGT 58.457 41.667 5.17 0.00 0.00 2.73
769 786 4.623167 CGAAATCACTGTCTGACCTTGTAG 59.377 45.833 5.17 0.00 0.00 2.74
770 787 4.038763 ACGAAATCACTGTCTGACCTTGTA 59.961 41.667 5.17 0.00 0.00 2.41
771 788 3.181465 ACGAAATCACTGTCTGACCTTGT 60.181 43.478 5.17 0.00 0.00 3.16
772 789 3.393800 ACGAAATCACTGTCTGACCTTG 58.606 45.455 5.17 2.50 0.00 3.61
773 790 3.555168 GGACGAAATCACTGTCTGACCTT 60.555 47.826 5.17 0.00 33.21 3.50
774 791 2.028930 GGACGAAATCACTGTCTGACCT 60.029 50.000 5.17 0.00 33.21 3.85
775 792 2.338500 GGACGAAATCACTGTCTGACC 58.662 52.381 5.17 0.00 33.21 4.02
776 793 2.338500 GGGACGAAATCACTGTCTGAC 58.662 52.381 0.00 0.00 33.21 3.51
777 794 1.275291 GGGGACGAAATCACTGTCTGA 59.725 52.381 0.00 0.00 33.21 3.27
778 795 1.276421 AGGGGACGAAATCACTGTCTG 59.724 52.381 0.00 0.00 33.21 3.51
779 796 1.550976 GAGGGGACGAAATCACTGTCT 59.449 52.381 0.00 0.00 33.21 3.41
780 797 1.405661 GGAGGGGACGAAATCACTGTC 60.406 57.143 0.00 0.00 0.00 3.51
781 798 0.613777 GGAGGGGACGAAATCACTGT 59.386 55.000 0.00 0.00 0.00 3.55
782 799 0.460284 CGGAGGGGACGAAATCACTG 60.460 60.000 0.00 0.00 0.00 3.66
783 800 0.613853 TCGGAGGGGACGAAATCACT 60.614 55.000 0.00 0.00 37.42 3.41
784 801 0.459759 GTCGGAGGGGACGAAATCAC 60.460 60.000 0.00 0.00 42.55 3.06
785 802 0.901114 TGTCGGAGGGGACGAAATCA 60.901 55.000 0.00 0.00 42.55 2.57
786 803 0.464452 ATGTCGGAGGGGACGAAATC 59.536 55.000 0.00 0.00 42.55 2.17
787 804 0.464452 GATGTCGGAGGGGACGAAAT 59.536 55.000 0.00 0.00 42.55 2.17
788 805 1.895238 GATGTCGGAGGGGACGAAA 59.105 57.895 0.00 0.00 42.55 3.46
789 806 2.412323 CGATGTCGGAGGGGACGAA 61.412 63.158 0.00 0.00 42.55 3.85
790 807 2.827190 CGATGTCGGAGGGGACGA 60.827 66.667 0.00 0.00 39.83 4.20
791 808 4.570663 GCGATGTCGGAGGGGACG 62.571 72.222 4.44 0.00 39.83 4.79
792 809 3.148279 AGCGATGTCGGAGGGGAC 61.148 66.667 4.44 0.00 40.23 4.46
793 810 3.147595 CAGCGATGTCGGAGGGGA 61.148 66.667 4.44 0.00 40.23 4.81
794 811 4.227134 CCAGCGATGTCGGAGGGG 62.227 72.222 0.00 0.00 40.23 4.79
795 812 2.635229 CTTCCAGCGATGTCGGAGGG 62.635 65.000 0.00 0.00 40.23 4.30
849 866 1.198759 ATAAGCGTGGTGACTGGGGT 61.199 55.000 0.00 0.00 0.00 4.95
1121 1144 2.432628 GCACCTTCTCCACCGTCG 60.433 66.667 0.00 0.00 0.00 5.12
1359 1382 3.775654 GCCGCTGCAGGTAGGAGT 61.776 66.667 17.12 0.00 38.09 3.85
1403 1426 1.113517 GGTGCTAGCTGATCCGGGTA 61.114 60.000 17.23 0.00 0.00 3.69
1425 1448 1.923204 CTAAGCGTACAGAGCAGCAAG 59.077 52.381 0.00 0.00 37.01 4.01
1446 1469 3.743396 CAGAACTCCAAGCAACAGACTAC 59.257 47.826 0.00 0.00 0.00 2.73
1452 1476 1.597742 GAGCAGAACTCCAAGCAACA 58.402 50.000 0.00 0.00 39.75 3.33
1463 1487 3.482783 GCGCGTCAGGAGCAGAAC 61.483 66.667 8.43 0.00 41.59 3.01
1481 1506 1.973281 AATCAGCACAACCCAGCGG 60.973 57.895 0.00 0.00 35.48 5.52
1487 1512 4.635654 GTGATCGGCAATCAGCACAACC 62.636 54.545 1.54 0.00 45.06 3.77
1502 1527 1.120551 CGCAAAGCAAAAACGTGATCG 59.879 47.619 0.00 0.00 43.34 3.69
1506 1531 1.395820 GCATCGCAAAGCAAAAACGTG 60.396 47.619 0.00 0.00 0.00 4.49
1508 1533 0.179302 CGCATCGCAAAGCAAAAACG 60.179 50.000 0.00 0.00 0.00 3.60
1509 1534 0.161446 CCGCATCGCAAAGCAAAAAC 59.839 50.000 0.00 0.00 0.00 2.43
1533 1590 1.453155 ATTGTGACGGGACTGAATGC 58.547 50.000 0.00 0.00 0.00 3.56
1536 1593 2.489971 GACAATTGTGACGGGACTGAA 58.510 47.619 17.58 0.00 0.00 3.02
1537 1594 1.270625 GGACAATTGTGACGGGACTGA 60.271 52.381 17.58 0.00 0.00 3.41
1545 1602 2.226437 ACGAGCATTGGACAATTGTGAC 59.774 45.455 17.58 9.33 0.00 3.67
1548 1605 3.149196 AGAACGAGCATTGGACAATTGT 58.851 40.909 11.78 11.78 0.00 2.71
1552 1609 1.798223 CGAAGAACGAGCATTGGACAA 59.202 47.619 0.00 0.00 45.77 3.18
1562 1619 5.004535 GCTGTTAATCCTAACGAAGAACGAG 59.995 44.000 0.00 0.00 45.77 4.18
1567 1624 7.491372 CAGTTATGCTGTTAATCCTAACGAAGA 59.509 37.037 0.00 0.00 40.38 2.87
1568 1625 7.491372 TCAGTTATGCTGTTAATCCTAACGAAG 59.509 37.037 0.00 0.00 45.23 3.79
1585 1642 9.482627 AGTAATAATCAGTAGCTTCAGTTATGC 57.517 33.333 0.00 0.00 0.00 3.14
1621 1707 4.343526 TGTACACCAAAACCAAGAATGCAT 59.656 37.500 0.00 0.00 0.00 3.96
1645 1732 3.574614 ACGAAGCACATAAATTGGCAAC 58.425 40.909 0.00 0.00 0.00 4.17
1663 1750 2.612721 CCATCATGACACACCTCAACGA 60.613 50.000 0.00 0.00 0.00 3.85
1697 1784 8.874156 AGAACATATATATGTCAGGCTTCAGAA 58.126 33.333 25.01 0.00 45.55 3.02
1698 1785 8.427902 AGAACATATATATGTCAGGCTTCAGA 57.572 34.615 25.01 0.00 45.55 3.27
1712 1799 8.978472 GGTGGATAGCCTACAAGAACATATATA 58.022 37.037 0.00 0.00 34.31 0.86
1755 1842 1.198767 CGAAATCTGCGCTCTCTGAG 58.801 55.000 9.73 0.00 0.00 3.35
1776 1863 0.809241 CCTCGGATTCACAGAGCTGC 60.809 60.000 0.00 0.00 39.00 5.25
1785 1872 0.974010 ACGTTAGCCCCTCGGATTCA 60.974 55.000 0.00 0.00 0.00 2.57
1789 1876 1.488390 ATAAACGTTAGCCCCTCGGA 58.512 50.000 0.00 0.00 0.00 4.55
1791 1878 1.937899 CCAATAAACGTTAGCCCCTCG 59.062 52.381 0.00 0.00 0.00 4.63
1979 2075 9.908152 TTAGAACATATTGTCCGATGTATACAG 57.092 33.333 11.91 0.00 35.21 2.74
2178 2275 3.306472 TTGTAACAAAGCCTTCCCAGT 57.694 42.857 0.00 0.00 0.00 4.00
2210 2307 6.271488 TCCACTCTGCATAAAATTGGAAAG 57.729 37.500 0.00 0.00 0.00 2.62
2247 2344 1.068472 ACAAGAGAACCTACGACTGCG 60.068 52.381 0.00 0.00 44.79 5.18
2538 2635 5.622914 CGCATTGAGAAAAGGATTGTGGAAT 60.623 40.000 0.00 0.00 0.00 3.01
2634 2731 8.355913 CAGTAGATATCAGACTGAAACTGCATA 58.644 37.037 23.68 0.00 42.65 3.14
2685 2786 2.200373 TCGAGTCTGATGGAGTGACA 57.800 50.000 0.00 0.00 33.56 3.58
2688 2789 3.790152 TCATTCGAGTCTGATGGAGTG 57.210 47.619 3.63 0.00 0.00 3.51
2740 2841 9.243105 ACAAAATGGCAAGTATAAGTTCACTAT 57.757 29.630 0.00 0.00 0.00 2.12
2741 2842 8.630054 ACAAAATGGCAAGTATAAGTTCACTA 57.370 30.769 0.00 0.00 0.00 2.74
2742 2843 7.524717 ACAAAATGGCAAGTATAAGTTCACT 57.475 32.000 0.00 0.00 0.00 3.41
2743 2844 8.587952 AAACAAAATGGCAAGTATAAGTTCAC 57.412 30.769 0.00 0.00 0.00 3.18
3027 3138 6.455360 AAACAGTGGCATTGATAGGTAATG 57.545 37.500 17.47 0.00 38.30 1.90
3035 3146 2.610438 AGGGAAACAGTGGCATTGAT 57.390 45.000 17.47 1.31 0.00 2.57
3057 3168 9.008289 CCGTAAACGTTAAATGTTACTTTGTTT 57.992 29.630 0.00 0.00 37.74 2.83
3082 3193 2.032924 GGCTGCGGTCAATACATAAACC 59.967 50.000 0.00 0.00 0.00 3.27
3097 3208 0.311790 AGTTGTCACATTTGGCTGCG 59.688 50.000 0.00 0.00 0.00 5.18
3126 3237 2.033049 CAGCAGCTTCACCAATATGAGC 59.967 50.000 0.00 0.00 0.00 4.26
3152 3263 0.898320 AGTATGTCACCTTCGCAGCT 59.102 50.000 0.00 0.00 0.00 4.24
3546 3661 5.540911 ACATGTTATTCCACCTTTTTGCAG 58.459 37.500 0.00 0.00 0.00 4.41
3551 3673 8.264347 AGTTTTGAACATGTTATTCCACCTTTT 58.736 29.630 11.95 0.00 0.00 2.27
3565 3687 4.667668 GCTCGTCTGCTAGTTTTGAACATG 60.668 45.833 0.00 0.00 0.00 3.21
3575 3697 0.322997 ACTCAGGCTCGTCTGCTAGT 60.323 55.000 0.00 0.00 34.91 2.57
3678 3800 2.627699 GAGAGGGAGAGTATGGAAGCTG 59.372 54.545 0.00 0.00 0.00 4.24
3753 3877 2.038952 CCACTCCACAAGATCTTGACCA 59.961 50.000 36.15 19.57 42.93 4.02
3799 3923 1.419012 CTCCTGAGATAATGGCAGGCA 59.581 52.381 0.00 0.00 46.82 4.75
3912 4036 5.479716 AAGCATAACACAAATACGGCTAC 57.520 39.130 0.00 0.00 0.00 3.58
4031 4156 6.852420 TTGCTTACTCACTAATAGACCTGT 57.148 37.500 0.00 0.00 0.00 4.00
4131 4264 4.348486 TCTGGTCTGCTTCTAGAGAATGT 58.652 43.478 0.00 0.00 33.01 2.71
4146 4279 7.232534 TGTTAAATGCATAAAAGGTTCTGGTCT 59.767 33.333 0.00 0.00 0.00 3.85
4264 4397 0.895530 ACTCCGAGCGAATTTCTGGA 59.104 50.000 0.00 0.00 0.00 3.86
4775 4918 0.106918 TGCGACTTTCACCCCAAACT 60.107 50.000 0.00 0.00 0.00 2.66
4829 4972 7.448469 GTGATGGGCATATATACCTGAAAGTTT 59.552 37.037 1.92 0.00 0.00 2.66
4903 5046 8.424918 CAGCAGATAGAGGAAACTAAAGGATAA 58.575 37.037 0.00 0.00 44.43 1.75
5338 5482 9.970395 CAATATCAAGTATATTGCCAATGTTGT 57.030 29.630 0.00 0.00 46.40 3.32
5354 5498 8.946085 ACGAACAAACATATGTCAATATCAAGT 58.054 29.630 9.23 0.00 31.81 3.16
5378 5523 1.719780 GAAAGCGTCTTGTCACCTACG 59.280 52.381 0.00 0.00 38.34 3.51
5520 5665 2.968574 TGAAGTAGCCTCCATCAGATCC 59.031 50.000 0.00 0.00 0.00 3.36
5589 5734 5.121221 AGCTTCCAAGGTTTTACAATTCG 57.879 39.130 0.00 0.00 31.69 3.34
5688 5833 2.934364 GCCATCTTCAGTCTGGTCACAG 60.934 54.545 0.00 0.00 46.30 3.66
5820 5965 3.210074 ACCTCCATAGAAGGTATCAGGGT 59.790 47.826 0.00 0.00 33.61 4.34
5894 6039 0.239347 CTGAAAACAGCAGCGGAAGG 59.761 55.000 0.00 0.00 0.00 3.46
5916 6061 7.080099 GCCAGATGTGTATATGTTTGCTATTG 58.920 38.462 0.00 0.00 0.00 1.90
5973 6118 5.114780 TCAAGTAAATGCTCAGCTCTCATC 58.885 41.667 0.00 0.00 0.00 2.92
6115 6260 0.700564 ACCATGACAGGCTGACCATT 59.299 50.000 23.66 7.18 39.06 3.16
6138 6283 2.611292 GACCTCCATCTTCATTGCTTCG 59.389 50.000 0.00 0.00 0.00 3.79
6164 6309 3.701040 ACAAGACACCATCAGCAAGTTTT 59.299 39.130 0.00 0.00 0.00 2.43
6165 6310 3.290710 ACAAGACACCATCAGCAAGTTT 58.709 40.909 0.00 0.00 0.00 2.66
6176 6321 9.829507 ATTTGATCAAAATTTTACAAGACACCA 57.170 25.926 23.91 0.00 34.72 4.17
6205 6350 4.283363 AGAGAGTTGTGTCAGCATTGAT 57.717 40.909 0.00 0.00 35.39 2.57
6218 6363 7.360776 GCTGAGAAAAGGAATACAAGAGAGTTG 60.361 40.741 0.00 0.00 0.00 3.16
6239 6384 0.167470 CGCCTTCACAACATGCTGAG 59.833 55.000 2.44 0.00 0.00 3.35
6246 6391 2.664851 CGAGGCGCCTTCACAACA 60.665 61.111 33.34 0.00 0.00 3.33
6282 6427 1.609501 TCCAGCGGTAGCCTTCAGT 60.610 57.895 0.00 0.00 46.67 3.41
6440 6589 3.849574 TCAAGACTTCCAATGGTATGGGA 59.150 43.478 0.00 0.00 41.05 4.37
6449 6598 7.389053 GTGTGAATACTTCTCAAGACTTCCAAT 59.611 37.037 0.00 0.00 35.25 3.16
6450 6599 6.706270 GTGTGAATACTTCTCAAGACTTCCAA 59.294 38.462 0.00 0.00 35.25 3.53
6473 6622 8.454106 CAACAAATTACTCCAATCTTCTAGGTG 58.546 37.037 0.00 0.00 0.00 4.00
6499 6648 7.480810 AGACGGAGAAATTTTACATAAATGGC 58.519 34.615 0.00 0.00 0.00 4.40
6520 6669 1.173043 AGTTCAGCTCCTCAGAGACG 58.827 55.000 0.00 0.00 43.39 4.18
6527 6676 5.164954 CACTACTGTTTAGTTCAGCTCCTC 58.835 45.833 0.00 0.00 38.36 3.71
6529 6678 4.884247 ACACTACTGTTTAGTTCAGCTCC 58.116 43.478 0.00 0.00 38.36 4.70
6568 6717 6.127730 ACCACCACTGTTTCTTTTAACTCAAG 60.128 38.462 0.00 0.00 0.00 3.02
6578 6727 1.423921 CCCCTACCACCACTGTTTCTT 59.576 52.381 0.00 0.00 0.00 2.52
6596 6745 4.226620 TCCAGGAGAAAATAAGGTGTACCC 59.773 45.833 0.00 0.00 36.42 3.69
6600 6749 3.308473 GCCTCCAGGAGAAAATAAGGTGT 60.308 47.826 19.21 0.00 37.39 4.16
6630 6780 0.253327 GGCTCTCTAGGTGGGTTTGG 59.747 60.000 0.00 0.00 0.00 3.28
6634 6784 1.016415 TTAGGGCTCTCTAGGTGGGT 58.984 55.000 0.00 0.00 0.00 4.51
6697 6850 6.377429 ACATTATCTACTCCTGAGACGTTTGA 59.623 38.462 0.22 0.00 0.00 2.69
6715 6868 5.288472 GGTGTTGGAAAATGCGAACATTATC 59.712 40.000 0.00 0.00 45.90 1.75
6732 6885 0.673437 AGCACATTTTCCGGTGTTGG 59.327 50.000 0.00 0.00 37.35 3.77
6751 6904 7.330946 GCGATTATAGTTGTATACTGAATGCCA 59.669 37.037 4.17 0.00 37.73 4.92
6753 6906 8.467402 AGCGATTATAGTTGTATACTGAATGC 57.533 34.615 4.17 0.00 37.73 3.56
6783 6941 2.379907 ACAAGTTGATGGGGAATCACCT 59.620 45.455 10.54 0.00 45.17 4.00
6836 7036 3.091545 TCCAATTTCTGGGTTCATCAGC 58.908 45.455 0.00 0.00 46.44 4.26
6948 7148 6.538742 CAGCTATACTAGAGAGATCACCTAGC 59.461 46.154 12.89 6.08 34.70 3.42
6961 7161 9.845740 GAAGATATGATCTCCAGCTATACTAGA 57.154 37.037 0.00 0.00 39.08 2.43
7045 7245 6.735678 TGCGTTACATACTCACATGATTTT 57.264 33.333 0.00 0.00 0.00 1.82
7070 7270 2.049802 CAACGCAAGGCAGGCAAG 60.050 61.111 0.00 0.00 46.39 4.01
7074 7274 2.192861 TTGGACAACGCAAGGCAGG 61.193 57.895 0.00 0.00 46.39 4.85
7084 7284 4.272504 TCAAGAAGATTCACGTTGGACAAC 59.727 41.667 5.14 5.14 37.92 3.32
7099 7299 8.728337 ATCATCGAATTTCTCAATCAAGAAGA 57.272 30.769 0.00 0.00 36.66 2.87
7119 7319 3.989817 GGCTTTGTTGTTGTTGGATCATC 59.010 43.478 0.00 0.00 0.00 2.92
7140 7340 5.304357 ACCCCAACTTGTTTGAGATTAAAGG 59.696 40.000 0.00 0.00 37.39 3.11
7149 7349 1.497286 AGCCTACCCCAACTTGTTTGA 59.503 47.619 0.00 0.00 37.39 2.69
7174 7374 5.249780 TCTTATGGGTGTTAGGCTTTCAA 57.750 39.130 0.00 0.00 0.00 2.69
7175 7375 4.919774 TCTTATGGGTGTTAGGCTTTCA 57.080 40.909 0.00 0.00 0.00 2.69
7180 7380 4.196971 ACGAAATCTTATGGGTGTTAGGC 58.803 43.478 0.00 0.00 0.00 3.93
7181 7381 6.259387 GGTTACGAAATCTTATGGGTGTTAGG 59.741 42.308 0.00 0.00 0.00 2.69
7182 7382 6.819649 TGGTTACGAAATCTTATGGGTGTTAG 59.180 38.462 0.00 0.00 0.00 2.34
7183 7383 6.709281 TGGTTACGAAATCTTATGGGTGTTA 58.291 36.000 0.00 0.00 0.00 2.41
7184 7384 5.562635 TGGTTACGAAATCTTATGGGTGTT 58.437 37.500 0.00 0.00 0.00 3.32
7185 7385 5.168647 TGGTTACGAAATCTTATGGGTGT 57.831 39.130 0.00 0.00 0.00 4.16
7186 7386 5.448632 GCTTGGTTACGAAATCTTATGGGTG 60.449 44.000 0.00 0.00 0.00 4.61
7187 7387 4.638865 GCTTGGTTACGAAATCTTATGGGT 59.361 41.667 0.00 0.00 0.00 4.51
7209 7409 1.747355 CCATGTTCCAGAACCATGAGC 59.253 52.381 17.23 0.00 40.46 4.26
7222 7422 5.605534 TCTGAAAGCTAGCTATCCATGTTC 58.394 41.667 19.70 16.01 0.00 3.18
7223 7423 5.620738 TCTGAAAGCTAGCTATCCATGTT 57.379 39.130 19.70 6.46 0.00 2.71
7244 7478 6.532302 GCTCTAGCTACCTAAGTTGAAACTTC 59.468 42.308 11.56 0.00 42.07 3.01
7264 7498 5.130311 TCACCATACCTAAATTGCAGCTCTA 59.870 40.000 0.00 0.00 0.00 2.43
7265 7499 4.080356 TCACCATACCTAAATTGCAGCTCT 60.080 41.667 0.00 0.00 0.00 4.09
7387 7695 6.942976 TCGAACCTAATCCTACAATTTCACT 58.057 36.000 0.00 0.00 0.00 3.41
7395 7703 5.244402 TGTCAAGTTCGAACCTAATCCTACA 59.756 40.000 24.22 13.79 0.00 2.74
7396 7704 5.717119 TGTCAAGTTCGAACCTAATCCTAC 58.283 41.667 24.22 11.65 0.00 3.18
7397 7705 5.988310 TGTCAAGTTCGAACCTAATCCTA 57.012 39.130 24.22 1.71 0.00 2.94
7414 7722 4.535526 TCTGGATCATCGAGTTTGTCAA 57.464 40.909 0.00 0.00 0.00 3.18
7418 7726 5.122869 ACAACATTCTGGATCATCGAGTTTG 59.877 40.000 0.00 0.00 0.00 2.93
7420 7728 4.836825 ACAACATTCTGGATCATCGAGTT 58.163 39.130 0.00 0.00 0.00 3.01
7422 7730 5.808042 AAACAACATTCTGGATCATCGAG 57.192 39.130 0.00 0.00 0.00 4.04
7496 7805 9.434420 TCGCATTTCCAAGAAAATTATCAAATT 57.566 25.926 0.00 0.00 36.87 1.82
7498 7807 8.707839 GTTCGCATTTCCAAGAAAATTATCAAA 58.292 29.630 0.00 0.00 0.00 2.69
7499 7808 8.087750 AGTTCGCATTTCCAAGAAAATTATCAA 58.912 29.630 0.00 0.00 0.00 2.57
7506 7815 4.338118 AGACAGTTCGCATTTCCAAGAAAA 59.662 37.500 0.00 0.00 0.00 2.29
7507 7816 3.882888 AGACAGTTCGCATTTCCAAGAAA 59.117 39.130 0.00 0.00 0.00 2.52
7508 7817 3.250762 CAGACAGTTCGCATTTCCAAGAA 59.749 43.478 0.00 0.00 0.00 2.52
7509 7818 2.807967 CAGACAGTTCGCATTTCCAAGA 59.192 45.455 0.00 0.00 0.00 3.02
7510 7819 2.095567 CCAGACAGTTCGCATTTCCAAG 60.096 50.000 0.00 0.00 0.00 3.61
7520 7829 3.354089 AAAATGCAACCAGACAGTTCG 57.646 42.857 0.00 0.00 0.00 3.95
7543 7852 9.678260 TTTGATCCTCATTTTCCAAAAAGAAAA 57.322 25.926 2.27 2.27 46.63 2.29
7546 7855 7.790027 TGTTTGATCCTCATTTTCCAAAAAGA 58.210 30.769 0.00 0.00 0.00 2.52
7547 7856 8.436046 TTGTTTGATCCTCATTTTCCAAAAAG 57.564 30.769 0.00 0.00 0.00 2.27
7548 7857 8.263640 TCTTGTTTGATCCTCATTTTCCAAAAA 58.736 29.630 0.00 0.00 0.00 1.94
7566 7875 6.498304 AGCTTGTGTTTAGTCATCTTGTTTG 58.502 36.000 0.00 0.00 0.00 2.93
7569 7878 7.661437 TGATTAGCTTGTGTTTAGTCATCTTGT 59.339 33.333 0.00 0.00 0.00 3.16
7571 7880 7.661437 TGTGATTAGCTTGTGTTTAGTCATCTT 59.339 33.333 0.00 0.00 0.00 2.40
7572 7881 7.161404 TGTGATTAGCTTGTGTTTAGTCATCT 58.839 34.615 0.00 0.00 0.00 2.90
7573 7882 7.118390 ACTGTGATTAGCTTGTGTTTAGTCATC 59.882 37.037 0.00 0.00 0.00 2.92
7575 7884 6.288294 ACTGTGATTAGCTTGTGTTTAGTCA 58.712 36.000 0.00 0.00 0.00 3.41
7616 10494 8.424918 ACAGTCCAAGATTATATTCGAGTGATT 58.575 33.333 8.54 0.00 0.00 2.57
7617 10495 7.957002 ACAGTCCAAGATTATATTCGAGTGAT 58.043 34.615 8.54 0.00 0.00 3.06
7618 10496 7.348080 ACAGTCCAAGATTATATTCGAGTGA 57.652 36.000 8.54 0.00 0.00 3.41
7619 10497 7.042456 CCAACAGTCCAAGATTATATTCGAGTG 60.042 40.741 1.56 1.56 0.00 3.51
7620 10498 6.986817 CCAACAGTCCAAGATTATATTCGAGT 59.013 38.462 0.00 0.00 0.00 4.18
7621 10499 6.425114 CCCAACAGTCCAAGATTATATTCGAG 59.575 42.308 0.00 0.00 0.00 4.04
7622 10500 6.099125 TCCCAACAGTCCAAGATTATATTCGA 59.901 38.462 0.00 0.00 0.00 3.71
7623 10501 6.202954 GTCCCAACAGTCCAAGATTATATTCG 59.797 42.308 0.00 0.00 0.00 3.34
7624 10502 7.283329 AGTCCCAACAGTCCAAGATTATATTC 58.717 38.462 0.00 0.00 0.00 1.75
7625 10503 7.213178 AGTCCCAACAGTCCAAGATTATATT 57.787 36.000 0.00 0.00 0.00 1.28
7626 10504 6.831664 AGTCCCAACAGTCCAAGATTATAT 57.168 37.500 0.00 0.00 0.00 0.86
7627 10505 7.743116 TTAGTCCCAACAGTCCAAGATTATA 57.257 36.000 0.00 0.00 0.00 0.98
7628 10506 6.636454 TTAGTCCCAACAGTCCAAGATTAT 57.364 37.500 0.00 0.00 0.00 1.28
7629 10507 6.442541 TTTAGTCCCAACAGTCCAAGATTA 57.557 37.500 0.00 0.00 0.00 1.75
7630 10508 4.993705 TTAGTCCCAACAGTCCAAGATT 57.006 40.909 0.00 0.00 0.00 2.40
7631 10509 4.993705 TTTAGTCCCAACAGTCCAAGAT 57.006 40.909 0.00 0.00 0.00 2.40
7632 10510 4.781775 TTTTAGTCCCAACAGTCCAAGA 57.218 40.909 0.00 0.00 0.00 3.02
7633 10511 5.772521 CAATTTTAGTCCCAACAGTCCAAG 58.227 41.667 0.00 0.00 0.00 3.61
7634 10512 4.038642 GCAATTTTAGTCCCAACAGTCCAA 59.961 41.667 0.00 0.00 0.00 3.53
7635 10513 3.572255 GCAATTTTAGTCCCAACAGTCCA 59.428 43.478 0.00 0.00 0.00 4.02
7636 10514 3.572255 TGCAATTTTAGTCCCAACAGTCC 59.428 43.478 0.00 0.00 0.00 3.85
7637 10515 4.846779 TGCAATTTTAGTCCCAACAGTC 57.153 40.909 0.00 0.00 0.00 3.51
7638 10516 4.892934 TCTTGCAATTTTAGTCCCAACAGT 59.107 37.500 0.00 0.00 0.00 3.55
7639 10517 5.452078 TCTTGCAATTTTAGTCCCAACAG 57.548 39.130 0.00 0.00 0.00 3.16
7640 10518 5.860941 TTCTTGCAATTTTAGTCCCAACA 57.139 34.783 0.00 0.00 0.00 3.33
7641 10519 6.983890 TCTTTTCTTGCAATTTTAGTCCCAAC 59.016 34.615 0.00 0.00 0.00 3.77
7642 10520 7.118496 TCTTTTCTTGCAATTTTAGTCCCAA 57.882 32.000 0.00 0.00 0.00 4.12
7643 10521 6.723298 TCTTTTCTTGCAATTTTAGTCCCA 57.277 33.333 0.00 0.00 0.00 4.37
7644 10522 7.210174 AGTTCTTTTCTTGCAATTTTAGTCCC 58.790 34.615 0.00 0.00 0.00 4.46
7645 10523 7.382488 GGAGTTCTTTTCTTGCAATTTTAGTCC 59.618 37.037 0.00 0.87 0.00 3.85
7646 10524 7.920682 TGGAGTTCTTTTCTTGCAATTTTAGTC 59.079 33.333 0.00 0.00 0.00 2.59
7647 10525 7.706607 GTGGAGTTCTTTTCTTGCAATTTTAGT 59.293 33.333 0.00 0.00 0.00 2.24
7648 10526 7.706179 TGTGGAGTTCTTTTCTTGCAATTTTAG 59.294 33.333 0.00 0.00 0.00 1.85
7649 10527 7.551585 TGTGGAGTTCTTTTCTTGCAATTTTA 58.448 30.769 0.00 0.00 0.00 1.52
7650 10528 6.405538 TGTGGAGTTCTTTTCTTGCAATTTT 58.594 32.000 0.00 0.00 0.00 1.82
7651 10529 5.976458 TGTGGAGTTCTTTTCTTGCAATTT 58.024 33.333 0.00 0.00 0.00 1.82
7652 10530 5.596836 TGTGGAGTTCTTTTCTTGCAATT 57.403 34.783 0.00 0.00 0.00 2.32
7653 10531 5.596836 TTGTGGAGTTCTTTTCTTGCAAT 57.403 34.783 0.00 0.00 0.00 3.56
7654 10532 5.596836 ATTGTGGAGTTCTTTTCTTGCAA 57.403 34.783 0.00 0.00 0.00 4.08
7655 10533 5.350633 CAATTGTGGAGTTCTTTTCTTGCA 58.649 37.500 0.00 0.00 0.00 4.08
7656 10534 4.209911 GCAATTGTGGAGTTCTTTTCTTGC 59.790 41.667 7.40 0.00 0.00 4.01
7657 10535 4.442073 CGCAATTGTGGAGTTCTTTTCTTG 59.558 41.667 11.28 0.00 0.00 3.02
7658 10536 4.097892 ACGCAATTGTGGAGTTCTTTTCTT 59.902 37.500 22.27 0.00 0.00 2.52
7659 10537 3.632145 ACGCAATTGTGGAGTTCTTTTCT 59.368 39.130 22.27 0.00 0.00 2.52
7660 10538 3.964909 ACGCAATTGTGGAGTTCTTTTC 58.035 40.909 22.27 0.00 0.00 2.29
7661 10539 3.548014 CGACGCAATTGTGGAGTTCTTTT 60.548 43.478 22.27 0.00 0.00 2.27
7662 10540 2.032030 CGACGCAATTGTGGAGTTCTTT 60.032 45.455 22.27 0.00 0.00 2.52
7663 10541 1.531149 CGACGCAATTGTGGAGTTCTT 59.469 47.619 22.27 0.00 0.00 2.52
7664 10542 1.148310 CGACGCAATTGTGGAGTTCT 58.852 50.000 22.27 0.51 0.00 3.01
7665 10543 1.144969 TCGACGCAATTGTGGAGTTC 58.855 50.000 22.27 10.08 0.00 3.01
7666 10544 1.531149 CTTCGACGCAATTGTGGAGTT 59.469 47.619 22.27 1.66 0.00 3.01
7667 10545 1.148310 CTTCGACGCAATTGTGGAGT 58.852 50.000 22.27 10.24 0.00 3.85
7668 10546 1.148310 ACTTCGACGCAATTGTGGAG 58.852 50.000 22.27 15.10 0.00 3.86
7669 10547 1.588674 AACTTCGACGCAATTGTGGA 58.411 45.000 22.27 8.70 0.00 4.02
7670 10548 2.043411 CAAACTTCGACGCAATTGTGG 58.957 47.619 22.27 10.12 0.00 4.17
7671 10549 1.447938 GCAAACTTCGACGCAATTGTG 59.552 47.619 17.32 17.32 0.00 3.33
7672 10550 1.599419 GGCAAACTTCGACGCAATTGT 60.599 47.619 7.40 0.00 0.00 2.71
7673 10551 1.052287 GGCAAACTTCGACGCAATTG 58.948 50.000 0.00 0.00 0.00 2.32
7674 10552 0.385473 CGGCAAACTTCGACGCAATT 60.385 50.000 0.00 0.00 0.00 2.32
7675 10553 1.206578 CGGCAAACTTCGACGCAAT 59.793 52.632 0.00 0.00 0.00 3.56
7676 10554 1.429927 TTCGGCAAACTTCGACGCAA 61.430 50.000 0.00 0.00 34.99 4.85
7677 10555 1.429927 TTTCGGCAAACTTCGACGCA 61.430 50.000 0.00 0.00 34.99 5.24
7678 10556 0.316360 TTTTCGGCAAACTTCGACGC 60.316 50.000 0.00 0.00 34.99 5.19
7679 10557 1.382163 GTTTTCGGCAAACTTCGACG 58.618 50.000 0.00 0.00 41.58 5.12
7680 10558 1.064357 TGGTTTTCGGCAAACTTCGAC 59.936 47.619 3.42 0.00 43.95 4.20
7681 10559 1.064357 GTGGTTTTCGGCAAACTTCGA 59.936 47.619 3.42 0.00 43.95 3.71
7682 10560 1.064952 AGTGGTTTTCGGCAAACTTCG 59.935 47.619 3.42 0.00 43.95 3.79
7683 10561 2.098443 TCAGTGGTTTTCGGCAAACTTC 59.902 45.455 3.42 0.00 43.95 3.01
7684 10562 2.096248 TCAGTGGTTTTCGGCAAACTT 58.904 42.857 3.42 0.00 43.95 2.66
7685 10563 1.757682 TCAGTGGTTTTCGGCAAACT 58.242 45.000 3.42 0.00 43.95 2.66
7686 10564 2.793278 ATCAGTGGTTTTCGGCAAAC 57.207 45.000 0.00 0.00 43.78 2.93
7687 10565 3.810310 AAATCAGTGGTTTTCGGCAAA 57.190 38.095 0.00 0.00 0.00 3.68
7688 10566 3.712187 GAAAATCAGTGGTTTTCGGCAA 58.288 40.909 22.36 0.00 36.28 4.52
7689 10567 3.363341 GAAAATCAGTGGTTTTCGGCA 57.637 42.857 22.36 0.00 36.28 5.69
7693 10571 6.068473 ACTAACCGAAAATCAGTGGTTTTC 57.932 37.500 25.46 25.46 41.80 2.29
7694 10572 6.459670 AACTAACCGAAAATCAGTGGTTTT 57.540 33.333 13.94 13.94 41.80 2.43
7695 10573 6.459670 AAACTAACCGAAAATCAGTGGTTT 57.540 33.333 0.00 0.00 41.80 3.27
7696 10574 6.459670 AAAACTAACCGAAAATCAGTGGTT 57.540 33.333 0.79 0.79 46.04 3.67
7697 10575 6.459670 AAAAACTAACCGAAAATCAGTGGT 57.540 33.333 0.00 0.00 35.90 4.16
7720 10598 9.467258 CAATGAGATTTTAGTGCTTTCAGAAAA 57.533 29.630 0.00 0.00 0.00 2.29
7721 10599 8.849168 TCAATGAGATTTTAGTGCTTTCAGAAA 58.151 29.630 0.00 0.00 0.00 2.52
7722 10600 8.394971 TCAATGAGATTTTAGTGCTTTCAGAA 57.605 30.769 0.00 0.00 0.00 3.02
7723 10601 7.879677 TCTCAATGAGATTTTAGTGCTTTCAGA 59.120 33.333 9.18 0.00 33.35 3.27
7724 10602 8.037382 TCTCAATGAGATTTTAGTGCTTTCAG 57.963 34.615 9.18 0.00 33.35 3.02
7725 10603 7.361542 GCTCTCAATGAGATTTTAGTGCTTTCA 60.362 37.037 13.93 0.00 45.39 2.69
7726 10604 6.966066 GCTCTCAATGAGATTTTAGTGCTTTC 59.034 38.462 13.93 0.00 45.39 2.62
7727 10605 6.402983 CGCTCTCAATGAGATTTTAGTGCTTT 60.403 38.462 13.93 0.00 45.39 3.51
7728 10606 5.064452 CGCTCTCAATGAGATTTTAGTGCTT 59.936 40.000 13.93 0.00 45.39 3.91
7729 10607 4.569966 CGCTCTCAATGAGATTTTAGTGCT 59.430 41.667 13.93 0.00 45.39 4.40
7730 10608 4.331168 ACGCTCTCAATGAGATTTTAGTGC 59.669 41.667 13.93 10.44 45.39 4.40
7731 10609 6.414408 AACGCTCTCAATGAGATTTTAGTG 57.586 37.500 13.93 10.45 45.39 2.74
7732 10610 7.173218 TCAAAACGCTCTCAATGAGATTTTAGT 59.827 33.333 13.93 6.86 45.39 2.24
7733 10611 7.521529 TCAAAACGCTCTCAATGAGATTTTAG 58.478 34.615 13.93 11.52 45.39 1.85
7734 10612 7.433708 TCAAAACGCTCTCAATGAGATTTTA 57.566 32.000 13.93 0.62 45.39 1.52
7735 10613 6.317789 TCAAAACGCTCTCAATGAGATTTT 57.682 33.333 13.93 13.99 45.39 1.82
7736 10614 5.947228 TCAAAACGCTCTCAATGAGATTT 57.053 34.783 13.93 8.78 45.39 2.17
7737 10615 5.947228 TTCAAAACGCTCTCAATGAGATT 57.053 34.783 13.93 2.54 45.39 2.40
7738 10616 5.106396 CCTTTCAAAACGCTCTCAATGAGAT 60.106 40.000 13.93 0.00 45.39 2.75
7739 10617 4.214119 CCTTTCAAAACGCTCTCAATGAGA 59.786 41.667 12.87 12.87 45.39 3.27
7740 10618 4.214119 TCCTTTCAAAACGCTCTCAATGAG 59.786 41.667 3.38 3.38 45.33 2.90
7741 10619 4.133820 TCCTTTCAAAACGCTCTCAATGA 58.866 39.130 0.00 0.00 0.00 2.57
7742 10620 4.488126 TCCTTTCAAAACGCTCTCAATG 57.512 40.909 0.00 0.00 0.00 2.82
7743 10621 5.514274 TTTCCTTTCAAAACGCTCTCAAT 57.486 34.783 0.00 0.00 0.00 2.57
7744 10622 4.974368 TTTCCTTTCAAAACGCTCTCAA 57.026 36.364 0.00 0.00 0.00 3.02
7745 10623 4.974368 TTTTCCTTTCAAAACGCTCTCA 57.026 36.364 0.00 0.00 0.00 3.27
7746 10624 5.977129 TCAATTTTCCTTTCAAAACGCTCTC 59.023 36.000 0.00 0.00 0.00 3.20
7747 10625 5.748630 GTCAATTTTCCTTTCAAAACGCTCT 59.251 36.000 0.00 0.00 0.00 4.09
7748 10626 5.518487 TGTCAATTTTCCTTTCAAAACGCTC 59.482 36.000 0.00 0.00 0.00 5.03
7749 10627 5.415221 TGTCAATTTTCCTTTCAAAACGCT 58.585 33.333 0.00 0.00 0.00 5.07
7750 10628 5.710613 TGTCAATTTTCCTTTCAAAACGC 57.289 34.783 0.00 0.00 0.00 4.84
7751 10629 7.125113 CCATTGTCAATTTTCCTTTCAAAACG 58.875 34.615 0.00 0.00 0.00 3.60
7752 10630 7.416817 CCCATTGTCAATTTTCCTTTCAAAAC 58.583 34.615 0.00 0.00 0.00 2.43
7753 10631 6.545298 CCCCATTGTCAATTTTCCTTTCAAAA 59.455 34.615 0.00 0.00 0.00 2.44
7754 10632 6.060788 CCCCATTGTCAATTTTCCTTTCAAA 58.939 36.000 0.00 0.00 0.00 2.69
7755 10633 5.619220 CCCCATTGTCAATTTTCCTTTCAA 58.381 37.500 0.00 0.00 0.00 2.69
7756 10634 4.504689 GCCCCATTGTCAATTTTCCTTTCA 60.505 41.667 0.00 0.00 0.00 2.69
7757 10635 4.002982 GCCCCATTGTCAATTTTCCTTTC 58.997 43.478 0.00 0.00 0.00 2.62
7758 10636 3.244875 GGCCCCATTGTCAATTTTCCTTT 60.245 43.478 0.00 0.00 0.00 3.11
7759 10637 2.305635 GGCCCCATTGTCAATTTTCCTT 59.694 45.455 0.00 0.00 0.00 3.36
7760 10638 1.908619 GGCCCCATTGTCAATTTTCCT 59.091 47.619 0.00 0.00 0.00 3.36
7761 10639 1.065491 GGGCCCCATTGTCAATTTTCC 60.065 52.381 12.23 0.00 0.00 3.13
7762 10640 1.405391 CGGGCCCCATTGTCAATTTTC 60.405 52.381 18.66 0.00 0.00 2.29
7763 10641 0.612744 CGGGCCCCATTGTCAATTTT 59.387 50.000 18.66 0.00 0.00 1.82
7764 10642 1.264045 CCGGGCCCCATTGTCAATTT 61.264 55.000 18.66 0.00 0.00 1.82
7765 10643 1.685421 CCGGGCCCCATTGTCAATT 60.685 57.895 18.66 0.00 0.00 2.32
7766 10644 2.043046 CCGGGCCCCATTGTCAAT 60.043 61.111 18.66 0.00 0.00 2.57
7805 10683 4.035102 AGAACAGCCGCCCCTTCC 62.035 66.667 0.00 0.00 0.00 3.46
7806 10684 2.747855 CAGAACAGCCGCCCCTTC 60.748 66.667 0.00 0.00 0.00 3.46
7807 10685 4.351054 CCAGAACAGCCGCCCCTT 62.351 66.667 0.00 0.00 0.00 3.95
7809 10687 4.344865 TTCCAGAACAGCCGCCCC 62.345 66.667 0.00 0.00 0.00 5.80
7810 10688 2.747855 CTTCCAGAACAGCCGCCC 60.748 66.667 0.00 0.00 0.00 6.13
7811 10689 1.743252 CTCTTCCAGAACAGCCGCC 60.743 63.158 0.00 0.00 0.00 6.13
7812 10690 2.394563 GCTCTTCCAGAACAGCCGC 61.395 63.158 0.00 0.00 0.00 6.53
7813 10691 0.321122 AAGCTCTTCCAGAACAGCCG 60.321 55.000 4.30 0.00 33.58 5.52
7814 10692 1.003003 AGAAGCTCTTCCAGAACAGCC 59.997 52.381 6.04 0.00 40.33 4.85
7815 10693 2.075338 CAGAAGCTCTTCCAGAACAGC 58.925 52.381 6.04 0.00 40.33 4.40
7816 10694 2.301296 TCCAGAAGCTCTTCCAGAACAG 59.699 50.000 6.04 0.00 40.33 3.16
7817 10695 2.301296 CTCCAGAAGCTCTTCCAGAACA 59.699 50.000 6.04 0.00 40.33 3.18
7818 10696 2.301583 ACTCCAGAAGCTCTTCCAGAAC 59.698 50.000 6.04 0.00 40.33 3.01
7819 10697 2.614259 ACTCCAGAAGCTCTTCCAGAA 58.386 47.619 6.04 0.00 40.33 3.02
7820 10698 2.317371 ACTCCAGAAGCTCTTCCAGA 57.683 50.000 6.04 3.24 40.33 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.