Multiple sequence alignment - TraesCS5D01G060300

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G060300 chr5D 100.000 4190 0 0 1 4190 56954125 56949936 0.000000e+00 7738.0
1 TraesCS5D01G060300 chr5D 80.528 303 40 14 6 297 527926840 527926546 9.120000e-52 215.0
2 TraesCS5D01G060300 chr5D 80.838 167 18 9 2685 2846 456341900 456341743 7.360000e-23 119.0
3 TraesCS5D01G060300 chr5D 86.441 59 8 0 2685 2743 340511768 340511826 9.720000e-07 65.8
4 TraesCS5D01G060300 chr5B 90.450 1623 105 26 1399 3012 59927859 59926278 0.000000e+00 2093.0
5 TraesCS5D01G060300 chr5B 87.883 685 33 14 304 965 59929015 59928358 0.000000e+00 760.0
6 TraesCS5D01G060300 chr5B 87.916 571 62 7 3389 3956 59922236 59921670 0.000000e+00 665.0
7 TraesCS5D01G060300 chr5B 91.466 457 18 10 967 1418 59928312 59927872 3.580000e-170 608.0
8 TraesCS5D01G060300 chr5B 91.906 383 19 4 3013 3390 59926195 59925820 3.710000e-145 525.0
9 TraesCS5D01G060300 chr5B 81.250 160 18 8 2685 2841 558121109 558120959 7.360000e-23 119.0
10 TraesCS5D01G060300 chr5B 86.441 59 8 0 2685 2743 399300108 399300166 9.720000e-07 65.8
11 TraesCS5D01G060300 chr5A 90.839 1288 77 15 1284 2565 45371754 45370502 0.000000e+00 1687.0
12 TraesCS5D01G060300 chr5A 84.915 1001 76 30 297 1278 45372738 45371794 0.000000e+00 942.0
13 TraesCS5D01G060300 chr5A 86.702 564 66 6 3399 3956 45369105 45368545 5.950000e-173 617.0
14 TraesCS5D01G060300 chr5A 88.462 416 16 16 2597 3010 45370499 45370114 1.360000e-129 473.0
15 TraesCS5D01G060300 chr5A 84.956 226 20 7 3015 3231 45370034 45369814 2.540000e-52 217.0
16 TraesCS5D01G060300 chr5A 80.838 167 18 9 2685 2846 574197553 574197396 7.360000e-23 119.0
17 TraesCS5D01G060300 chr5A 86.441 59 8 0 2685 2743 441478547 441478605 9.720000e-07 65.8
18 TraesCS5D01G060300 chr2D 89.933 298 17 2 1 297 528073990 528074275 5.120000e-99 372.0
19 TraesCS5D01G060300 chr4D 88.889 315 16 9 1 301 464357531 464357840 1.840000e-98 370.0
20 TraesCS5D01G060300 chr3D 91.703 229 18 1 3952 4180 484803905 484804132 2.430000e-82 316.0
21 TraesCS5D01G060300 chr3D 92.417 211 16 0 3953 4163 70280435 70280645 6.810000e-78 302.0
22 TraesCS5D01G060300 chr3D 89.868 227 22 1 3943 4168 571607245 571607019 1.470000e-74 291.0
23 TraesCS5D01G060300 chr3B 85.484 310 33 9 1 299 504992690 504992382 3.150000e-81 313.0
24 TraesCS5D01G060300 chr1D 92.925 212 15 0 3953 4164 18864767 18864556 4.070000e-80 309.0
25 TraesCS5D01G060300 chr1D 92.857 210 15 0 3953 4162 234737270 234737061 5.260000e-79 305.0
26 TraesCS5D01G060300 chr1D 92.857 210 15 0 3953 4162 482993879 482994088 5.260000e-79 305.0
27 TraesCS5D01G060300 chr1D 90.090 111 11 0 6 116 28611392 28611502 1.210000e-30 145.0
28 TraesCS5D01G060300 chr6A 91.364 220 15 3 3946 4163 558457489 558457706 8.810000e-77 298.0
29 TraesCS5D01G060300 chr6A 91.364 220 15 3 3946 4163 558460809 558461026 8.810000e-77 298.0
30 TraesCS5D01G060300 chr6A 88.889 99 11 0 1 99 119948052 119947954 5.690000e-24 122.0
31 TraesCS5D01G060300 chrUn 90.909 220 16 3 3949 4166 138272147 138271930 4.100000e-75 292.0
32 TraesCS5D01G060300 chrUn 80.528 303 40 14 6 297 290614777 290614483 9.120000e-52 215.0
33 TraesCS5D01G060300 chr7D 92.973 185 11 2 115 298 81136753 81136570 6.900000e-68 268.0
34 TraesCS5D01G060300 chr7D 91.892 185 13 2 115 298 81560530 81560347 1.490000e-64 257.0
35 TraesCS5D01G060300 chr7D 91.848 184 13 2 115 297 81468534 81468716 5.380000e-64 255.0
36 TraesCS5D01G060300 chr3A 92.199 141 10 1 152 292 86561479 86561618 9.190000e-47 198.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G060300 chr5D 56949936 56954125 4189 True 7738.0 7738 100.0000 1 4190 1 chr5D.!!$R1 4189
1 TraesCS5D01G060300 chr5B 59921670 59929015 7345 True 930.2 2093 89.9242 304 3956 5 chr5B.!!$R2 3652
2 TraesCS5D01G060300 chr5A 45368545 45372738 4193 True 787.2 1687 87.1748 297 3956 5 chr5A.!!$R2 3659
3 TraesCS5D01G060300 chr6A 558457489 558461026 3537 False 298.0 298 91.3640 3946 4163 2 chr6A.!!$F1 217

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
79 80 0.107643 GCCCTGGAGATAGAGCAACC 59.892 60.0 0.00 0.00 0.00 3.77 F
93 94 0.174162 GCAACCATCATGCCTTGGTC 59.826 55.0 13.16 1.85 45.44 4.02 F
1221 1303 0.037326 TTCCACCGCTGAGCTTACAG 60.037 55.0 1.78 0.00 40.43 2.74 F
2078 2237 0.107654 GATTGGTTCCAGGAGGGTCG 60.108 60.0 0.00 0.00 38.11 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1202 1284 0.037326 CTGTAAGCTCAGCGGTGGAA 60.037 55.0 15.67 0.0 0.0 3.53 R
1622 1781 0.105246 AGCCCCCATTGGTTGTTTCA 60.105 50.0 1.20 0.0 0.0 2.69 R
2484 2652 0.103937 GTCCCTTCTCCTCTGCATCG 59.896 60.0 0.00 0.0 0.0 3.84 R
3872 8239 0.583438 CACAGCTTCAAGTGTCCACG 59.417 55.0 0.00 0.0 36.2 4.94 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 5.026462 CGCCTTATACGAGAATGTATACCG 58.974 45.833 0.00 0.00 37.10 4.02
24 25 4.797349 GCCTTATACGAGAATGTATACCGC 59.203 45.833 0.00 0.00 37.10 5.68
25 26 5.392811 GCCTTATACGAGAATGTATACCGCT 60.393 44.000 0.00 0.00 37.10 5.52
26 27 6.028368 CCTTATACGAGAATGTATACCGCTG 58.972 44.000 0.00 0.00 37.10 5.18
27 28 6.128090 CCTTATACGAGAATGTATACCGCTGA 60.128 42.308 0.00 0.00 37.10 4.26
28 29 5.700722 ATACGAGAATGTATACCGCTGAA 57.299 39.130 0.00 0.00 33.37 3.02
29 30 3.703420 ACGAGAATGTATACCGCTGAAC 58.297 45.455 0.00 0.00 0.00 3.18
30 31 3.380637 ACGAGAATGTATACCGCTGAACT 59.619 43.478 0.00 0.00 0.00 3.01
31 32 3.731216 CGAGAATGTATACCGCTGAACTG 59.269 47.826 0.00 0.00 0.00 3.16
32 33 4.683832 GAGAATGTATACCGCTGAACTGT 58.316 43.478 0.00 0.00 0.00 3.55
33 34 5.086104 AGAATGTATACCGCTGAACTGTT 57.914 39.130 0.00 0.00 0.00 3.16
34 35 6.216801 AGAATGTATACCGCTGAACTGTTA 57.783 37.500 0.00 0.00 0.00 2.41
35 36 6.636705 AGAATGTATACCGCTGAACTGTTAA 58.363 36.000 0.00 0.00 0.00 2.01
36 37 6.534079 AGAATGTATACCGCTGAACTGTTAAC 59.466 38.462 0.00 0.00 0.00 2.01
37 38 5.395682 TGTATACCGCTGAACTGTTAACT 57.604 39.130 7.22 0.00 0.00 2.24
38 39 5.786311 TGTATACCGCTGAACTGTTAACTT 58.214 37.500 7.22 0.00 0.00 2.66
39 40 6.225318 TGTATACCGCTGAACTGTTAACTTT 58.775 36.000 7.22 0.00 0.00 2.66
40 41 7.377398 TGTATACCGCTGAACTGTTAACTTTA 58.623 34.615 7.22 0.00 0.00 1.85
41 42 8.036575 TGTATACCGCTGAACTGTTAACTTTAT 58.963 33.333 7.22 0.00 0.00 1.40
42 43 5.607119 ACCGCTGAACTGTTAACTTTATG 57.393 39.130 7.22 0.00 0.00 1.90
43 44 4.454504 ACCGCTGAACTGTTAACTTTATGG 59.545 41.667 7.22 1.80 0.00 2.74
44 45 4.693566 CCGCTGAACTGTTAACTTTATGGA 59.306 41.667 7.22 0.00 0.00 3.41
45 46 5.163854 CCGCTGAACTGTTAACTTTATGGAG 60.164 44.000 7.22 0.00 0.00 3.86
46 47 5.631992 GCTGAACTGTTAACTTTATGGAGC 58.368 41.667 7.22 2.59 0.00 4.70
47 48 5.392057 GCTGAACTGTTAACTTTATGGAGCC 60.392 44.000 7.22 0.00 0.00 4.70
48 49 5.626142 TGAACTGTTAACTTTATGGAGCCA 58.374 37.500 7.22 0.00 0.00 4.75
49 50 5.472137 TGAACTGTTAACTTTATGGAGCCAC 59.528 40.000 7.22 0.00 0.00 5.01
50 51 4.332828 ACTGTTAACTTTATGGAGCCACC 58.667 43.478 7.22 0.00 39.54 4.61
51 52 3.340034 TGTTAACTTTATGGAGCCACCG 58.660 45.455 7.22 0.00 42.61 4.94
52 53 3.244630 TGTTAACTTTATGGAGCCACCGT 60.245 43.478 7.22 0.00 42.61 4.83
53 54 1.821216 AACTTTATGGAGCCACCGTG 58.179 50.000 0.00 0.00 42.61 4.94
54 55 0.676782 ACTTTATGGAGCCACCGTGC 60.677 55.000 0.00 0.00 42.61 5.34
55 56 0.392998 CTTTATGGAGCCACCGTGCT 60.393 55.000 0.00 0.00 46.37 4.40
71 72 2.912542 CTCGGCGCCCTGGAGATA 60.913 66.667 23.46 0.00 0.00 1.98
72 73 2.912542 TCGGCGCCCTGGAGATAG 60.913 66.667 23.46 2.86 0.00 2.08
73 74 2.912542 CGGCGCCCTGGAGATAGA 60.913 66.667 23.46 0.00 0.00 1.98
74 75 2.925262 CGGCGCCCTGGAGATAGAG 61.925 68.421 23.46 0.00 0.00 2.43
75 76 2.341911 GCGCCCTGGAGATAGAGC 59.658 66.667 0.00 0.00 0.00 4.09
76 77 2.502492 GCGCCCTGGAGATAGAGCA 61.502 63.158 0.00 0.00 0.00 4.26
77 78 2.032860 GCGCCCTGGAGATAGAGCAA 62.033 60.000 0.00 0.00 0.00 3.91
78 79 0.249657 CGCCCTGGAGATAGAGCAAC 60.250 60.000 0.00 0.00 0.00 4.17
79 80 0.107643 GCCCTGGAGATAGAGCAACC 59.892 60.000 0.00 0.00 0.00 3.77
80 81 1.500474 CCCTGGAGATAGAGCAACCA 58.500 55.000 0.00 0.00 0.00 3.67
81 82 2.053244 CCCTGGAGATAGAGCAACCAT 58.947 52.381 0.00 0.00 0.00 3.55
82 83 2.038295 CCCTGGAGATAGAGCAACCATC 59.962 54.545 0.00 0.00 0.00 3.51
83 84 2.702478 CCTGGAGATAGAGCAACCATCA 59.298 50.000 0.00 0.00 0.00 3.07
84 85 3.327172 CCTGGAGATAGAGCAACCATCAT 59.673 47.826 0.00 0.00 0.00 2.45
85 86 4.316645 CTGGAGATAGAGCAACCATCATG 58.683 47.826 0.00 0.00 0.00 3.07
86 87 3.072944 GGAGATAGAGCAACCATCATGC 58.927 50.000 0.00 0.00 44.15 4.06
87 88 3.072944 GAGATAGAGCAACCATCATGCC 58.927 50.000 0.00 0.00 44.91 4.40
88 89 2.709934 AGATAGAGCAACCATCATGCCT 59.290 45.455 0.00 0.00 44.91 4.75
89 90 3.137913 AGATAGAGCAACCATCATGCCTT 59.862 43.478 0.00 0.00 44.91 4.35
90 91 1.471119 AGAGCAACCATCATGCCTTG 58.529 50.000 0.00 0.00 44.91 3.61
91 92 0.458669 GAGCAACCATCATGCCTTGG 59.541 55.000 7.40 7.40 44.91 3.61
93 94 0.174162 GCAACCATCATGCCTTGGTC 59.826 55.000 13.16 1.85 45.44 4.02
94 95 1.843368 CAACCATCATGCCTTGGTCT 58.157 50.000 13.16 4.26 45.44 3.85
95 96 1.747355 CAACCATCATGCCTTGGTCTC 59.253 52.381 13.16 0.00 45.44 3.36
96 97 0.994247 ACCATCATGCCTTGGTCTCA 59.006 50.000 8.49 0.00 42.61 3.27
97 98 1.355381 ACCATCATGCCTTGGTCTCAA 59.645 47.619 8.49 0.00 42.61 3.02
98 99 2.225091 ACCATCATGCCTTGGTCTCAAA 60.225 45.455 8.49 0.00 42.61 2.69
99 100 2.165030 CCATCATGCCTTGGTCTCAAAC 59.835 50.000 0.00 0.00 31.77 2.93
100 101 2.957402 TCATGCCTTGGTCTCAAACT 57.043 45.000 0.00 0.00 31.77 2.66
101 102 2.783135 TCATGCCTTGGTCTCAAACTC 58.217 47.619 0.00 0.00 31.77 3.01
102 103 2.373169 TCATGCCTTGGTCTCAAACTCT 59.627 45.455 0.00 0.00 31.77 3.24
103 104 3.152341 CATGCCTTGGTCTCAAACTCTT 58.848 45.455 0.00 0.00 31.77 2.85
104 105 3.297134 TGCCTTGGTCTCAAACTCTTT 57.703 42.857 0.00 0.00 31.77 2.52
105 106 3.631250 TGCCTTGGTCTCAAACTCTTTT 58.369 40.909 0.00 0.00 31.77 2.27
106 107 3.381272 TGCCTTGGTCTCAAACTCTTTTG 59.619 43.478 0.00 0.00 43.17 2.44
107 108 3.243535 GCCTTGGTCTCAAACTCTTTTGG 60.244 47.826 0.00 0.00 42.23 3.28
108 109 3.243535 CCTTGGTCTCAAACTCTTTTGGC 60.244 47.826 0.00 0.00 42.23 4.52
109 110 3.297134 TGGTCTCAAACTCTTTTGGCT 57.703 42.857 0.00 0.00 42.23 4.75
110 111 3.631250 TGGTCTCAAACTCTTTTGGCTT 58.369 40.909 0.00 0.00 42.23 4.35
111 112 4.787551 TGGTCTCAAACTCTTTTGGCTTA 58.212 39.130 0.00 0.00 42.23 3.09
112 113 4.821805 TGGTCTCAAACTCTTTTGGCTTAG 59.178 41.667 0.00 0.00 42.23 2.18
113 114 4.822350 GGTCTCAAACTCTTTTGGCTTAGT 59.178 41.667 0.00 0.00 42.23 2.24
114 115 5.299531 GGTCTCAAACTCTTTTGGCTTAGTT 59.700 40.000 0.00 0.00 42.23 2.24
115 116 6.183360 GGTCTCAAACTCTTTTGGCTTAGTTT 60.183 38.462 0.00 0.00 42.23 2.66
116 117 7.258441 GTCTCAAACTCTTTTGGCTTAGTTTT 58.742 34.615 0.00 0.00 42.23 2.43
117 118 7.759886 GTCTCAAACTCTTTTGGCTTAGTTTTT 59.240 33.333 0.00 0.00 42.23 1.94
118 119 7.759433 TCTCAAACTCTTTTGGCTTAGTTTTTG 59.241 33.333 0.00 0.00 42.23 2.44
119 120 6.816140 TCAAACTCTTTTGGCTTAGTTTTTGG 59.184 34.615 0.00 0.00 42.23 3.28
120 121 4.693283 ACTCTTTTGGCTTAGTTTTTGGC 58.307 39.130 0.00 0.00 0.00 4.52
121 122 4.161377 ACTCTTTTGGCTTAGTTTTTGGCA 59.839 37.500 0.00 0.00 34.48 4.92
122 123 5.163311 ACTCTTTTGGCTTAGTTTTTGGCAT 60.163 36.000 0.00 0.00 36.21 4.40
123 124 6.041523 ACTCTTTTGGCTTAGTTTTTGGCATA 59.958 34.615 0.00 0.00 36.21 3.14
124 125 6.454795 TCTTTTGGCTTAGTTTTTGGCATAG 58.545 36.000 0.00 0.00 36.21 2.23
125 126 5.799827 TTTGGCTTAGTTTTTGGCATAGT 57.200 34.783 0.00 0.00 36.21 2.12
126 127 5.799827 TTGGCTTAGTTTTTGGCATAGTT 57.200 34.783 0.00 0.00 36.21 2.24
127 128 5.799827 TGGCTTAGTTTTTGGCATAGTTT 57.200 34.783 0.00 0.00 0.00 2.66
128 129 6.902771 TGGCTTAGTTTTTGGCATAGTTTA 57.097 33.333 0.00 0.00 0.00 2.01
129 130 6.919721 TGGCTTAGTTTTTGGCATAGTTTAG 58.080 36.000 0.00 0.00 0.00 1.85
130 131 5.805486 GGCTTAGTTTTTGGCATAGTTTAGC 59.195 40.000 0.00 0.00 0.00 3.09
131 132 6.350194 GGCTTAGTTTTTGGCATAGTTTAGCT 60.350 38.462 0.00 0.00 0.00 3.32
132 133 7.090808 GCTTAGTTTTTGGCATAGTTTAGCTT 58.909 34.615 0.00 0.00 0.00 3.74
133 134 7.062255 GCTTAGTTTTTGGCATAGTTTAGCTTG 59.938 37.037 0.00 0.00 0.00 4.01
134 135 5.230182 AGTTTTTGGCATAGTTTAGCTTGC 58.770 37.500 0.00 0.00 33.51 4.01
135 136 3.866883 TTTGGCATAGTTTAGCTTGCC 57.133 42.857 16.40 16.40 44.36 4.52
136 137 2.806945 TGGCATAGTTTAGCTTGCCT 57.193 45.000 22.07 5.37 44.39 4.75
137 138 3.924114 TGGCATAGTTTAGCTTGCCTA 57.076 42.857 22.07 8.98 44.39 3.93
138 139 3.808728 TGGCATAGTTTAGCTTGCCTAG 58.191 45.455 22.07 0.00 44.39 3.02
155 156 2.828145 GCTCATGCTCCCCTCTCC 59.172 66.667 0.00 0.00 36.03 3.71
156 157 2.817056 GCTCATGCTCCCCTCTCCC 61.817 68.421 0.00 0.00 36.03 4.30
157 158 2.040464 TCATGCTCCCCTCTCCCC 60.040 66.667 0.00 0.00 0.00 4.81
158 159 2.040043 CATGCTCCCCTCTCCCCT 60.040 66.667 0.00 0.00 0.00 4.79
159 160 2.040043 ATGCTCCCCTCTCCCCTG 60.040 66.667 0.00 0.00 0.00 4.45
160 161 2.965927 ATGCTCCCCTCTCCCCTGT 61.966 63.158 0.00 0.00 0.00 4.00
161 162 2.285743 GCTCCCCTCTCCCCTGTT 60.286 66.667 0.00 0.00 0.00 3.16
162 163 2.371259 GCTCCCCTCTCCCCTGTTC 61.371 68.421 0.00 0.00 0.00 3.18
163 164 1.394151 CTCCCCTCTCCCCTGTTCT 59.606 63.158 0.00 0.00 0.00 3.01
164 165 0.689412 CTCCCCTCTCCCCTGTTCTC 60.689 65.000 0.00 0.00 0.00 2.87
165 166 1.156322 TCCCCTCTCCCCTGTTCTCT 61.156 60.000 0.00 0.00 0.00 3.10
166 167 0.689412 CCCCTCTCCCCTGTTCTCTC 60.689 65.000 0.00 0.00 0.00 3.20
167 168 0.338120 CCCTCTCCCCTGTTCTCTCT 59.662 60.000 0.00 0.00 0.00 3.10
168 169 1.273552 CCCTCTCCCCTGTTCTCTCTT 60.274 57.143 0.00 0.00 0.00 2.85
169 170 2.107366 CCTCTCCCCTGTTCTCTCTTC 58.893 57.143 0.00 0.00 0.00 2.87
170 171 2.107366 CTCTCCCCTGTTCTCTCTTCC 58.893 57.143 0.00 0.00 0.00 3.46
171 172 1.433199 TCTCCCCTGTTCTCTCTTCCA 59.567 52.381 0.00 0.00 0.00 3.53
172 173 1.830477 CTCCCCTGTTCTCTCTTCCAG 59.170 57.143 0.00 0.00 0.00 3.86
173 174 0.908198 CCCCTGTTCTCTCTTCCAGG 59.092 60.000 0.00 0.00 43.34 4.45
174 175 0.251634 CCCTGTTCTCTCTTCCAGGC 59.748 60.000 0.00 0.00 42.55 4.85
175 176 1.274712 CCTGTTCTCTCTTCCAGGCT 58.725 55.000 0.00 0.00 38.19 4.58
176 177 1.627834 CCTGTTCTCTCTTCCAGGCTT 59.372 52.381 0.00 0.00 38.19 4.35
177 178 2.354604 CCTGTTCTCTCTTCCAGGCTTC 60.355 54.545 0.00 0.00 38.19 3.86
178 179 2.566724 CTGTTCTCTCTTCCAGGCTTCT 59.433 50.000 0.00 0.00 0.00 2.85
179 180 2.564947 TGTTCTCTCTTCCAGGCTTCTC 59.435 50.000 0.00 0.00 0.00 2.87
180 181 2.564947 GTTCTCTCTTCCAGGCTTCTCA 59.435 50.000 0.00 0.00 0.00 3.27
181 182 3.113191 TCTCTCTTCCAGGCTTCTCAT 57.887 47.619 0.00 0.00 0.00 2.90
182 183 2.765135 TCTCTCTTCCAGGCTTCTCATG 59.235 50.000 0.00 0.00 0.00 3.07
189 190 1.093159 CAGGCTTCTCATGGACTTGC 58.907 55.000 0.00 0.00 0.00 4.01
190 191 0.694771 AGGCTTCTCATGGACTTGCA 59.305 50.000 0.00 0.00 0.00 4.08
191 192 0.807496 GGCTTCTCATGGACTTGCAC 59.193 55.000 0.00 0.00 0.00 4.57
192 193 0.807496 GCTTCTCATGGACTTGCACC 59.193 55.000 0.00 0.00 0.00 5.01
193 194 1.883638 GCTTCTCATGGACTTGCACCA 60.884 52.381 0.00 0.00 41.83 4.17
194 195 1.808945 CTTCTCATGGACTTGCACCAC 59.191 52.381 0.00 0.00 40.36 4.16
195 196 0.320683 TCTCATGGACTTGCACCACG 60.321 55.000 0.00 0.00 40.36 4.94
196 197 1.300971 CTCATGGACTTGCACCACGG 61.301 60.000 0.00 0.00 40.36 4.94
197 198 1.600636 CATGGACTTGCACCACGGT 60.601 57.895 0.00 0.00 40.36 4.83
209 210 3.135414 CACCACGGTGCAAAATATGAG 57.865 47.619 2.68 0.00 39.39 2.90
210 211 1.472480 ACCACGGTGCAAAATATGAGC 59.528 47.619 1.68 0.00 0.00 4.26
211 212 1.202290 CCACGGTGCAAAATATGAGCC 60.202 52.381 1.68 0.00 0.00 4.70
212 213 1.102978 ACGGTGCAAAATATGAGCCC 58.897 50.000 0.00 0.00 0.00 5.19
213 214 0.385390 CGGTGCAAAATATGAGCCCC 59.615 55.000 0.00 0.00 0.00 5.80
214 215 1.484038 GGTGCAAAATATGAGCCCCA 58.516 50.000 0.00 0.00 0.00 4.96
215 216 2.041701 GGTGCAAAATATGAGCCCCAT 58.958 47.619 0.00 0.00 39.25 4.00
216 217 2.224113 GGTGCAAAATATGAGCCCCATG 60.224 50.000 0.00 0.00 36.71 3.66
217 218 2.431782 GTGCAAAATATGAGCCCCATGT 59.568 45.455 0.00 0.00 36.71 3.21
218 219 3.636300 GTGCAAAATATGAGCCCCATGTA 59.364 43.478 0.00 0.00 36.71 2.29
219 220 3.636300 TGCAAAATATGAGCCCCATGTAC 59.364 43.478 0.00 0.00 36.71 2.90
220 221 3.005791 GCAAAATATGAGCCCCATGTACC 59.994 47.826 0.00 0.00 36.71 3.34
221 222 2.859165 AATATGAGCCCCATGTACCG 57.141 50.000 0.00 0.00 36.71 4.02
222 223 2.024176 ATATGAGCCCCATGTACCGA 57.976 50.000 0.00 0.00 36.71 4.69
223 224 2.024176 TATGAGCCCCATGTACCGAT 57.976 50.000 0.00 0.00 36.71 4.18
224 225 0.687354 ATGAGCCCCATGTACCGATC 59.313 55.000 0.00 0.00 33.39 3.69
225 226 0.398522 TGAGCCCCATGTACCGATCT 60.399 55.000 0.00 0.00 0.00 2.75
226 227 0.759346 GAGCCCCATGTACCGATCTT 59.241 55.000 0.00 0.00 0.00 2.40
227 228 1.968493 GAGCCCCATGTACCGATCTTA 59.032 52.381 0.00 0.00 0.00 2.10
228 229 2.567615 GAGCCCCATGTACCGATCTTAT 59.432 50.000 0.00 0.00 0.00 1.73
229 230 2.303022 AGCCCCATGTACCGATCTTATG 59.697 50.000 0.00 0.00 0.00 1.90
230 231 2.301870 GCCCCATGTACCGATCTTATGA 59.698 50.000 0.00 0.00 0.00 2.15
231 232 3.055094 GCCCCATGTACCGATCTTATGAT 60.055 47.826 0.00 0.00 35.26 2.45
232 233 4.759782 CCCCATGTACCGATCTTATGATC 58.240 47.826 8.26 8.26 44.14 2.92
233 234 4.383118 CCCCATGTACCGATCTTATGATCC 60.383 50.000 11.82 0.81 44.61 3.36
234 235 4.467795 CCCATGTACCGATCTTATGATCCT 59.532 45.833 11.82 2.11 44.61 3.24
235 236 5.046304 CCCATGTACCGATCTTATGATCCTT 60.046 44.000 11.82 3.37 44.61 3.36
236 237 6.467677 CCATGTACCGATCTTATGATCCTTT 58.532 40.000 11.82 1.32 44.61 3.11
237 238 6.369890 CCATGTACCGATCTTATGATCCTTTG 59.630 42.308 11.82 3.03 44.61 2.77
238 239 5.853936 TGTACCGATCTTATGATCCTTTGG 58.146 41.667 11.82 9.76 44.61 3.28
239 240 3.744660 ACCGATCTTATGATCCTTTGGC 58.255 45.455 11.82 0.00 44.61 4.52
240 241 3.392616 ACCGATCTTATGATCCTTTGGCT 59.607 43.478 11.82 0.00 44.61 4.75
241 242 4.141390 ACCGATCTTATGATCCTTTGGCTT 60.141 41.667 11.82 0.00 44.61 4.35
242 243 4.453819 CCGATCTTATGATCCTTTGGCTTC 59.546 45.833 11.82 0.00 44.61 3.86
243 244 4.151335 CGATCTTATGATCCTTTGGCTTCG 59.849 45.833 11.82 0.00 44.61 3.79
244 245 3.808728 TCTTATGATCCTTTGGCTTCGG 58.191 45.455 0.00 0.00 0.00 4.30
245 246 1.967319 TATGATCCTTTGGCTTCGGC 58.033 50.000 0.00 0.00 40.88 5.54
263 264 7.084486 GCTTCGGCCTTTTGAAATATATAAGG 58.916 38.462 0.00 6.80 38.68 2.69
264 265 7.255486 GCTTCGGCCTTTTGAAATATATAAGGT 60.255 37.037 0.00 0.00 38.08 3.50
265 266 9.280174 CTTCGGCCTTTTGAAATATATAAGGTA 57.720 33.333 0.00 0.00 38.08 3.08
266 267 8.842358 TCGGCCTTTTGAAATATATAAGGTAG 57.158 34.615 0.00 7.14 38.08 3.18
267 268 8.653191 TCGGCCTTTTGAAATATATAAGGTAGA 58.347 33.333 0.00 8.75 38.08 2.59
268 269 9.280174 CGGCCTTTTGAAATATATAAGGTAGAA 57.720 33.333 0.00 0.00 38.08 2.10
358 359 1.065418 CCGGTAGCCCATGAAAACTCT 60.065 52.381 0.00 0.00 0.00 3.24
418 419 1.227002 GAACTGCCCTCGACCGATC 60.227 63.158 0.00 0.00 0.00 3.69
478 480 4.687215 CCGCCGCCGATGGATGAT 62.687 66.667 0.00 0.00 36.29 2.45
479 481 3.417224 CGCCGCCGATGGATGATG 61.417 66.667 0.00 0.00 36.29 3.07
480 482 3.052082 GCCGCCGATGGATGATGG 61.052 66.667 0.00 0.00 0.00 3.51
481 483 2.427320 CCGCCGATGGATGATGGT 59.573 61.111 0.00 0.00 0.00 3.55
482 484 1.962822 CCGCCGATGGATGATGGTG 60.963 63.158 0.00 0.00 0.00 4.17
483 485 1.069596 CGCCGATGGATGATGGTGA 59.930 57.895 0.00 0.00 33.86 4.02
599 601 4.432712 GCCAAAACTGAACATGTCAAACT 58.567 39.130 0.00 0.00 35.22 2.66
604 606 4.558538 ACTGAACATGTCAAACTTGCTC 57.441 40.909 0.00 0.00 35.22 4.26
611 616 2.022934 TGTCAAACTTGCTCACATGCA 58.977 42.857 0.00 0.00 41.65 3.96
612 617 2.624364 TGTCAAACTTGCTCACATGCAT 59.376 40.909 0.00 0.00 42.96 3.96
613 618 2.984471 GTCAAACTTGCTCACATGCATG 59.016 45.455 25.09 25.09 42.96 4.06
614 619 1.724623 CAAACTTGCTCACATGCATGC 59.275 47.619 26.53 11.82 42.96 4.06
615 620 0.963225 AACTTGCTCACATGCATGCA 59.037 45.000 26.53 25.04 42.96 3.96
616 621 1.182667 ACTTGCTCACATGCATGCAT 58.817 45.000 27.46 27.46 42.96 3.96
645 650 0.819259 TGTTGAGCTGGGCTTGACAC 60.819 55.000 0.00 0.00 39.88 3.67
713 718 0.389166 GCCCGATCGCCTAAGATCTG 60.389 60.000 10.32 0.00 43.52 2.90
784 789 1.515519 GCTTACACGCCGACGATCA 60.516 57.895 0.00 0.00 43.93 2.92
785 790 1.740043 GCTTACACGCCGACGATCAC 61.740 60.000 0.00 0.00 43.93 3.06
804 833 2.606725 CACTCATGATCGAACCTTGCTC 59.393 50.000 0.00 0.00 0.00 4.26
824 854 2.126071 GCCTCTGAGTACGCGCAA 60.126 61.111 5.73 0.00 0.00 4.85
825 855 1.519455 GCCTCTGAGTACGCGCAAT 60.519 57.895 5.73 0.00 0.00 3.56
826 856 0.248907 GCCTCTGAGTACGCGCAATA 60.249 55.000 5.73 0.00 0.00 1.90
827 857 1.603172 GCCTCTGAGTACGCGCAATAT 60.603 52.381 5.73 0.00 0.00 1.28
830 860 3.304458 CCTCTGAGTACGCGCAATATACA 60.304 47.826 5.73 3.31 0.00 2.29
832 862 4.866921 TCTGAGTACGCGCAATATACAAT 58.133 39.130 5.73 0.00 0.00 2.71
833 863 4.679654 TCTGAGTACGCGCAATATACAATG 59.320 41.667 5.73 0.00 0.00 2.82
834 864 4.612943 TGAGTACGCGCAATATACAATGA 58.387 39.130 5.73 0.00 0.00 2.57
835 865 5.044558 TGAGTACGCGCAATATACAATGAA 58.955 37.500 5.73 0.00 0.00 2.57
836 866 5.694458 TGAGTACGCGCAATATACAATGAAT 59.306 36.000 5.73 0.00 0.00 2.57
837 867 6.864165 TGAGTACGCGCAATATACAATGAATA 59.136 34.615 5.73 0.00 0.00 1.75
838 868 7.061789 TGAGTACGCGCAATATACAATGAATAG 59.938 37.037 5.73 0.00 0.00 1.73
854 884 5.537300 TGAATAGTGATCTCTGGGTAAGC 57.463 43.478 7.56 0.00 0.00 3.09
855 885 4.962362 TGAATAGTGATCTCTGGGTAAGCA 59.038 41.667 7.56 0.00 0.00 3.91
921 951 3.245443 GGCGACGATTATCACGACA 57.755 52.632 0.00 0.00 33.73 4.35
922 952 1.552226 GGCGACGATTATCACGACAA 58.448 50.000 0.00 0.00 33.73 3.18
923 953 1.517276 GGCGACGATTATCACGACAAG 59.483 52.381 0.00 0.00 33.73 3.16
925 955 2.793585 GCGACGATTATCACGACAAGGA 60.794 50.000 0.00 0.00 34.70 3.36
926 956 2.782192 CGACGATTATCACGACAAGGAC 59.218 50.000 0.00 0.00 34.70 3.85
927 957 3.487042 CGACGATTATCACGACAAGGACT 60.487 47.826 0.00 0.00 34.70 3.85
965 995 4.801891 TGTTGCTAGTTAGGTCGTACTTG 58.198 43.478 0.00 0.00 0.00 3.16
991 1065 0.543749 AGGTGAGAGCCATTACCTGC 59.456 55.000 1.81 0.00 41.76 4.85
1063 1137 4.780815 TCCAGTTCAGTCAAATCAACAGT 58.219 39.130 0.00 0.00 0.00 3.55
1133 1213 1.954382 GTTCTGAACCCACCCAACTTC 59.046 52.381 9.38 0.00 0.00 3.01
1182 1264 3.899981 TTGCAACTCGCCGCTCCAT 62.900 57.895 0.00 0.00 41.33 3.41
1183 1265 3.567797 GCAACTCGCCGCTCCATC 61.568 66.667 0.00 0.00 32.94 3.51
1184 1266 2.892425 CAACTCGCCGCTCCATCC 60.892 66.667 0.00 0.00 0.00 3.51
1185 1267 3.390521 AACTCGCCGCTCCATCCA 61.391 61.111 0.00 0.00 0.00 3.41
1186 1268 2.735772 AACTCGCCGCTCCATCCAT 61.736 57.895 0.00 0.00 0.00 3.41
1201 1283 0.332293 TCCATTCCATCCTGCTGCAA 59.668 50.000 3.02 0.00 0.00 4.08
1202 1284 1.063492 TCCATTCCATCCTGCTGCAAT 60.063 47.619 3.02 0.00 0.00 3.56
1205 1287 1.477553 TTCCATCCTGCTGCAATTCC 58.522 50.000 3.02 0.00 0.00 3.01
1212 1294 2.180017 GCTGCAATTCCACCGCTG 59.820 61.111 0.00 0.00 0.00 5.18
1219 1301 1.398390 CAATTCCACCGCTGAGCTTAC 59.602 52.381 1.78 0.00 0.00 2.34
1220 1302 0.613260 ATTCCACCGCTGAGCTTACA 59.387 50.000 1.78 0.00 0.00 2.41
1221 1303 0.037326 TTCCACCGCTGAGCTTACAG 60.037 55.000 1.78 0.00 40.43 2.74
1225 1307 3.298958 CGCTGAGCTTACAGGGGA 58.701 61.111 1.78 0.00 43.74 4.81
1382 1507 8.309656 AGAGTGTACCAAACTATACCTGTTTAC 58.690 37.037 0.00 0.00 36.07 2.01
1395 1520 9.909644 CTATACCTGTTTACCTACACATATGAC 57.090 37.037 10.38 0.00 0.00 3.06
1509 1668 2.095212 GTGAGCGAGTGTGTCTCATACA 60.095 50.000 0.00 0.00 42.88 2.29
1546 1705 2.202932 CGTCCCGGCAGATTGGAG 60.203 66.667 0.00 0.00 0.00 3.86
1599 1758 3.461773 CCGTCCTCATCACCGCCT 61.462 66.667 0.00 0.00 0.00 5.52
1604 1763 0.178767 TCCTCATCACCGCCTGATTG 59.821 55.000 0.00 0.00 37.53 2.67
1608 1767 1.485895 TCATCACCGCCTGATTGATCA 59.514 47.619 0.00 0.00 37.53 2.92
1616 1775 4.096984 ACCGCCTGATTGATCATCTTTTTC 59.903 41.667 0.00 0.00 36.02 2.29
1617 1776 4.337555 CCGCCTGATTGATCATCTTTTTCT 59.662 41.667 0.00 0.00 36.02 2.52
1620 1779 6.471519 CGCCTGATTGATCATCTTTTTCTTTC 59.528 38.462 0.00 0.00 36.02 2.62
1621 1780 7.545489 GCCTGATTGATCATCTTTTTCTTTCT 58.455 34.615 0.00 0.00 36.02 2.52
1622 1781 8.033626 GCCTGATTGATCATCTTTTTCTTTCTT 58.966 33.333 0.00 0.00 36.02 2.52
1623 1782 9.355215 CCTGATTGATCATCTTTTTCTTTCTTG 57.645 33.333 0.00 0.00 36.02 3.02
1631 1790 8.702163 TCATCTTTTTCTTTCTTGAAACAACC 57.298 30.769 0.00 0.00 35.91 3.77
1632 1791 8.310382 TCATCTTTTTCTTTCTTGAAACAACCA 58.690 29.630 0.00 0.00 35.91 3.67
1638 1797 4.100808 TCTTTCTTGAAACAACCAATGGGG 59.899 41.667 3.55 0.00 44.81 4.96
1643 1802 1.184970 AAACAACCAATGGGGGCTCG 61.185 55.000 3.55 0.00 42.91 5.03
1689 1848 3.127533 GCATGTGGCGTGTCCCTC 61.128 66.667 0.00 0.00 0.00 4.30
1755 1914 3.250323 CGTCGTCATGCAGAGCCG 61.250 66.667 0.00 0.00 0.00 5.52
1811 1970 2.340809 CGCCGTGGTTCCAGTACA 59.659 61.111 0.00 0.00 0.00 2.90
1822 1981 1.154338 CCAGTACACCGTCGTCGAC 60.154 63.158 15.51 15.51 39.71 4.20
1858 2017 2.232399 GTCGAGAGGGACCTATTCTCC 58.768 57.143 12.52 0.00 35.11 3.71
1888 2047 4.875713 GGAATGCCGGCGGATGGT 62.876 66.667 33.44 11.23 0.00 3.55
1927 2086 1.118356 AGGAGGATAAGCAGCGAGGG 61.118 60.000 0.00 0.00 0.00 4.30
2062 2221 1.546476 GAGTCCTCTGTGGTCACGATT 59.454 52.381 0.00 0.00 37.07 3.34
2078 2237 0.107654 GATTGGTTCCAGGAGGGTCG 60.108 60.000 0.00 0.00 38.11 4.79
2161 2320 3.869272 CTGCCGCTGATCCGCAAC 61.869 66.667 9.90 0.98 0.00 4.17
2166 2325 3.430862 GCTGATCCGCAACCGCAA 61.431 61.111 4.00 0.00 38.40 4.85
2180 2339 3.334054 GCAAGGAGGCCAGGGACT 61.334 66.667 5.01 0.00 43.88 3.85
2415 2574 1.066645 ACCGGATTAACACCTTCGTCC 60.067 52.381 9.46 0.00 0.00 4.79
2435 2603 4.022155 GTCCTACTTCGAGTTTCCTTGACT 60.022 45.833 0.00 0.00 30.49 3.41
2436 2604 4.217983 TCCTACTTCGAGTTTCCTTGACTC 59.782 45.833 0.00 0.00 40.05 3.36
2437 2605 4.218852 CCTACTTCGAGTTTCCTTGACTCT 59.781 45.833 3.17 0.00 41.02 3.24
2438 2606 4.674281 ACTTCGAGTTTCCTTGACTCTT 57.326 40.909 3.17 0.00 41.02 2.85
2439 2607 4.372656 ACTTCGAGTTTCCTTGACTCTTG 58.627 43.478 3.17 0.00 41.02 3.02
2440 2608 3.386768 TCGAGTTTCCTTGACTCTTGG 57.613 47.619 3.17 0.00 41.02 3.61
2441 2609 2.037251 TCGAGTTTCCTTGACTCTTGGG 59.963 50.000 3.17 0.00 41.02 4.12
2442 2610 2.155279 GAGTTTCCTTGACTCTTGGGC 58.845 52.381 0.00 0.00 40.24 5.36
2443 2611 1.202940 AGTTTCCTTGACTCTTGGGCC 60.203 52.381 0.00 0.00 0.00 5.80
2444 2612 1.149101 TTTCCTTGACTCTTGGGCCT 58.851 50.000 4.53 0.00 0.00 5.19
2445 2613 0.693049 TTCCTTGACTCTTGGGCCTC 59.307 55.000 4.53 0.00 0.00 4.70
2446 2614 0.178891 TCCTTGACTCTTGGGCCTCT 60.179 55.000 4.53 0.00 0.00 3.69
2469 2637 2.437359 GCCGCCATTGCTGACTCT 60.437 61.111 0.00 0.00 34.43 3.24
2470 2638 2.467826 GCCGCCATTGCTGACTCTC 61.468 63.158 0.00 0.00 34.43 3.20
2484 2652 2.095008 TGACTCTCTGTTCTGCGTGATC 60.095 50.000 0.00 0.00 0.00 2.92
2570 2738 6.071952 CCACTGCAACAAAGTATGTAATTCCT 60.072 38.462 0.00 0.00 42.99 3.36
2590 2758 4.767255 CCCTCCGCAGCTTCGCTT 62.767 66.667 0.00 0.00 36.40 4.68
2605 2778 2.447250 TCGCTTTAGTCGCTACGAATG 58.553 47.619 0.00 0.00 37.72 2.67
2620 2793 7.456684 GCTACGAATGCGATCTTCAATATAT 57.543 36.000 0.00 0.00 41.64 0.86
2621 2794 8.561932 GCTACGAATGCGATCTTCAATATATA 57.438 34.615 0.00 0.00 41.64 0.86
2622 2795 9.020813 GCTACGAATGCGATCTTCAATATATAA 57.979 33.333 0.00 0.00 41.64 0.98
2625 2798 9.077674 ACGAATGCGATCTTCAATATATAACTC 57.922 33.333 0.00 0.00 41.64 3.01
2626 2799 9.295214 CGAATGCGATCTTCAATATATAACTCT 57.705 33.333 0.00 0.00 40.82 3.24
2630 2803 9.574458 TGCGATCTTCAATATATAACTCTTAGC 57.426 33.333 0.00 0.00 0.00 3.09
2631 2804 9.574458 GCGATCTTCAATATATAACTCTTAGCA 57.426 33.333 0.00 0.00 0.00 3.49
2880 3054 2.202349 GCCATTCACGACTTGCGC 60.202 61.111 0.00 0.00 46.04 6.09
2920 3094 4.392445 CCAGAATTGAGCTGAGAGACTTTG 59.608 45.833 0.00 0.00 35.39 2.77
2955 3129 6.197282 GCTTTACTTTGTTCAGAGAAGTTTGC 59.803 38.462 0.00 0.00 35.43 3.68
3057 3314 5.687285 CACATTTGAAAGTAGTTCTTGTGGC 59.313 40.000 0.00 0.00 37.94 5.01
3070 3331 9.937175 GTAGTTCTTGTGGCTATCAAAATATTC 57.063 33.333 0.00 0.00 0.00 1.75
3073 3334 9.241317 GTTCTTGTGGCTATCAAAATATTCATG 57.759 33.333 0.00 0.00 0.00 3.07
3161 3425 9.898152 TTTCCAAATTGATGGTATTATTTTCCC 57.102 29.630 0.00 0.00 41.46 3.97
3307 3572 5.186603 TCACAGCTAAGTGATGTCATCTCTT 59.813 40.000 25.53 25.53 44.25 2.85
3327 3592 5.200483 TCTTTTGTGTGGTCTCATTTTCCT 58.800 37.500 0.00 0.00 0.00 3.36
3337 3602 7.723616 TGTGGTCTCATTTTCCTTCTTATCAAA 59.276 33.333 0.00 0.00 0.00 2.69
3338 3603 8.743714 GTGGTCTCATTTTCCTTCTTATCAAAT 58.256 33.333 0.00 0.00 0.00 2.32
3339 3604 9.973661 TGGTCTCATTTTCCTTCTTATCAAATA 57.026 29.630 0.00 0.00 0.00 1.40
3396 3661 9.216087 GTTTGTTTTTATTTGTTGTACATTGGC 57.784 29.630 0.00 0.00 0.00 4.52
3397 3662 8.492673 TTGTTTTTATTTGTTGTACATTGGCA 57.507 26.923 0.00 0.00 0.00 4.92
3401 7761 8.668510 TTTTATTTGTTGTACATTGGCATGTT 57.331 26.923 0.00 0.00 41.16 2.71
3413 7773 0.878416 GGCATGTTTACTTCCGCACA 59.122 50.000 0.00 0.00 0.00 4.57
3463 7827 1.666553 CGTTGAGGGCGTGCAGTTA 60.667 57.895 0.00 0.00 0.00 2.24
3522 7886 0.537143 GACATGCAACTGTCCACCCA 60.537 55.000 8.95 0.00 39.72 4.51
3525 7889 2.224992 ACATGCAACTGTCCACCCATTA 60.225 45.455 0.00 0.00 0.00 1.90
3573 7938 2.354805 CCCACACTAGAACAACCCTAGC 60.355 54.545 0.00 0.00 37.67 3.42
3609 7974 0.035458 GTGTAGTTGCAGTCAGGGCT 59.965 55.000 0.00 0.00 0.00 5.19
3612 7977 2.571653 TGTAGTTGCAGTCAGGGCTAAT 59.428 45.455 0.00 0.00 0.00 1.73
3633 7998 2.213499 ACTTGCAGTTGTGTGTCTAGC 58.787 47.619 0.00 0.00 0.00 3.42
3640 8005 2.143925 GTTGTGTGTCTAGCAAGGGAC 58.856 52.381 0.00 0.00 0.00 4.46
3664 8029 4.087892 CTGCCCACCCCTCGACAG 62.088 72.222 0.00 0.00 0.00 3.51
3694 8059 2.091102 CTGCAACCCCAGCACCAAAG 62.091 60.000 0.00 0.00 37.02 2.77
3695 8060 2.133641 GCAACCCCAGCACCAAAGT 61.134 57.895 0.00 0.00 0.00 2.66
3697 8062 1.247567 CAACCCCAGCACCAAAGTAG 58.752 55.000 0.00 0.00 0.00 2.57
3709 8074 4.057432 CACCAAAGTAGCCCAAATTGTTG 58.943 43.478 0.00 0.00 34.25 3.33
3716 8081 1.000274 AGCCCAAATTGTTGTCGCTTC 60.000 47.619 0.00 0.00 35.84 3.86
3860 8227 3.614092 CATTCTAGTTGAGGGTGTGCAT 58.386 45.455 0.00 0.00 0.00 3.96
3862 8229 3.334583 TCTAGTTGAGGGTGTGCATTC 57.665 47.619 0.00 0.00 0.00 2.67
3863 8230 2.906389 TCTAGTTGAGGGTGTGCATTCT 59.094 45.455 0.00 0.00 0.00 2.40
3866 8233 4.098914 AGTTGAGGGTGTGCATTCTTAA 57.901 40.909 0.00 0.00 0.00 1.85
3867 8234 3.821033 AGTTGAGGGTGTGCATTCTTAAC 59.179 43.478 0.00 0.00 0.00 2.01
3868 8235 3.788227 TGAGGGTGTGCATTCTTAACT 57.212 42.857 0.00 0.00 0.00 2.24
3869 8236 4.098914 TGAGGGTGTGCATTCTTAACTT 57.901 40.909 0.00 0.00 0.00 2.66
3870 8237 5.235850 TGAGGGTGTGCATTCTTAACTTA 57.764 39.130 0.00 0.00 0.00 2.24
3872 8239 4.010349 AGGGTGTGCATTCTTAACTTAGC 58.990 43.478 0.00 0.00 0.00 3.09
3873 8240 3.181510 GGGTGTGCATTCTTAACTTAGCG 60.182 47.826 0.00 0.00 0.00 4.26
3874 8241 3.435671 GGTGTGCATTCTTAACTTAGCGT 59.564 43.478 0.00 0.00 0.00 5.07
3875 8242 4.394795 GTGTGCATTCTTAACTTAGCGTG 58.605 43.478 0.00 0.00 0.00 5.34
3876 8243 3.435327 TGTGCATTCTTAACTTAGCGTGG 59.565 43.478 0.00 0.00 0.00 4.94
3887 8254 1.461127 CTTAGCGTGGACACTTGAAGC 59.539 52.381 0.56 0.00 0.00 3.86
3936 8303 1.341080 CCACCCCTCAACAAAATGCT 58.659 50.000 0.00 0.00 0.00 3.79
3943 8310 4.321230 CCCCTCAACAAAATGCTAGTTGTC 60.321 45.833 0.00 0.00 42.33 3.18
3971 8338 1.589113 GACGAGACTTGCCTGCTCT 59.411 57.895 0.00 0.00 0.00 4.09
3974 8341 1.153667 GAGACTTGCCTGCTCTCCG 60.154 63.158 0.00 0.00 0.00 4.63
3975 8342 2.817396 GACTTGCCTGCTCTCCGC 60.817 66.667 0.00 0.00 39.77 5.54
3977 8344 4.749310 CTTGCCTGCTCTCCGCGT 62.749 66.667 4.92 0.00 43.27 6.01
4020 8387 3.062909 GCGTACGTGGCTTGATTTGATTA 59.937 43.478 17.90 0.00 0.00 1.75
4021 8388 4.436317 GCGTACGTGGCTTGATTTGATTAA 60.436 41.667 17.90 0.00 0.00 1.40
4024 8391 6.032042 CGTACGTGGCTTGATTTGATTAAAAC 59.968 38.462 7.22 0.00 0.00 2.43
4124 8491 4.780815 CCATAGAATAAAGTGGGAGCACA 58.219 43.478 0.00 0.00 0.00 4.57
4125 8492 5.380043 CCATAGAATAAAGTGGGAGCACAT 58.620 41.667 0.00 0.00 0.00 3.21
4154 8521 4.120755 GGGAGGGAGCAGGCAAGG 62.121 72.222 0.00 0.00 0.00 3.61
4163 8530 4.883354 CAGGCAAGGCGGATCCCC 62.883 72.222 6.06 8.69 34.51 4.81
4166 8533 3.140814 GCAAGGCGGATCCCCAAC 61.141 66.667 18.32 6.33 34.51 3.77
4167 8534 2.440247 CAAGGCGGATCCCCAACC 60.440 66.667 18.32 10.06 34.51 3.77
4174 8541 4.815108 GATCCCCAACCCCCGCAC 62.815 72.222 0.00 0.00 0.00 5.34
4179 8546 4.924187 CCAACCCCCGCACCCAAA 62.924 66.667 0.00 0.00 0.00 3.28
4180 8547 3.611674 CAACCCCCGCACCCAAAC 61.612 66.667 0.00 0.00 0.00 2.93
4181 8548 4.144727 AACCCCCGCACCCAAACA 62.145 61.111 0.00 0.00 0.00 2.83
4182 8549 3.680920 AACCCCCGCACCCAAACAA 62.681 57.895 0.00 0.00 0.00 2.83
4183 8550 3.611674 CCCCCGCACCCAAACAAC 61.612 66.667 0.00 0.00 0.00 3.32
4184 8551 2.520741 CCCCGCACCCAAACAACT 60.521 61.111 0.00 0.00 0.00 3.16
4185 8552 2.561037 CCCCGCACCCAAACAACTC 61.561 63.158 0.00 0.00 0.00 3.01
4187 8554 1.654220 CCGCACCCAAACAACTCAG 59.346 57.895 0.00 0.00 0.00 3.35
4189 8556 0.738389 CGCACCCAAACAACTCAGTT 59.262 50.000 0.00 0.00 0.00 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.026462 CGGTATACATTCTCGTATAAGGCG 58.974 45.833 5.01 0.00 36.38 5.52
1 2 4.797349 GCGGTATACATTCTCGTATAAGGC 59.203 45.833 5.01 0.00 36.38 4.35
2 3 6.028368 CAGCGGTATACATTCTCGTATAAGG 58.972 44.000 5.01 0.00 36.38 2.69
3 4 6.839033 TCAGCGGTATACATTCTCGTATAAG 58.161 40.000 5.01 0.00 36.38 1.73
4 5 6.806388 TCAGCGGTATACATTCTCGTATAA 57.194 37.500 5.01 0.00 36.38 0.98
5 6 6.429078 AGTTCAGCGGTATACATTCTCGTATA 59.571 38.462 5.01 0.00 34.03 1.47
6 7 5.241064 AGTTCAGCGGTATACATTCTCGTAT 59.759 40.000 5.01 0.00 36.13 3.06
7 8 4.577693 AGTTCAGCGGTATACATTCTCGTA 59.422 41.667 5.01 0.00 0.00 3.43
8 9 3.380637 AGTTCAGCGGTATACATTCTCGT 59.619 43.478 5.01 0.00 0.00 4.18
9 10 3.731216 CAGTTCAGCGGTATACATTCTCG 59.269 47.826 5.01 0.00 0.00 4.04
10 11 4.683832 ACAGTTCAGCGGTATACATTCTC 58.316 43.478 5.01 0.00 0.00 2.87
11 12 4.737855 ACAGTTCAGCGGTATACATTCT 57.262 40.909 5.01 0.00 0.00 2.40
12 13 6.534079 AGTTAACAGTTCAGCGGTATACATTC 59.466 38.462 8.61 0.00 0.00 2.67
13 14 6.403878 AGTTAACAGTTCAGCGGTATACATT 58.596 36.000 8.61 0.00 0.00 2.71
14 15 5.974108 AGTTAACAGTTCAGCGGTATACAT 58.026 37.500 8.61 0.00 0.00 2.29
15 16 5.395682 AGTTAACAGTTCAGCGGTATACA 57.604 39.130 8.61 0.00 0.00 2.29
16 17 6.716898 AAAGTTAACAGTTCAGCGGTATAC 57.283 37.500 8.61 0.00 0.00 1.47
17 18 7.493320 CCATAAAGTTAACAGTTCAGCGGTATA 59.507 37.037 8.61 0.00 0.00 1.47
18 19 6.315393 CCATAAAGTTAACAGTTCAGCGGTAT 59.685 38.462 8.61 0.00 0.00 2.73
19 20 5.640357 CCATAAAGTTAACAGTTCAGCGGTA 59.360 40.000 8.61 0.00 0.00 4.02
20 21 4.454504 CCATAAAGTTAACAGTTCAGCGGT 59.545 41.667 8.61 0.00 0.00 5.68
21 22 4.693566 TCCATAAAGTTAACAGTTCAGCGG 59.306 41.667 8.61 0.00 0.00 5.52
22 23 5.671329 GCTCCATAAAGTTAACAGTTCAGCG 60.671 44.000 8.61 0.00 0.00 5.18
23 24 5.392057 GGCTCCATAAAGTTAACAGTTCAGC 60.392 44.000 8.61 6.00 0.00 4.26
24 25 5.705441 TGGCTCCATAAAGTTAACAGTTCAG 59.295 40.000 8.61 0.00 0.00 3.02
25 26 5.472137 GTGGCTCCATAAAGTTAACAGTTCA 59.528 40.000 8.61 0.00 0.00 3.18
26 27 5.106277 GGTGGCTCCATAAAGTTAACAGTTC 60.106 44.000 8.61 0.00 35.97 3.01
27 28 4.765339 GGTGGCTCCATAAAGTTAACAGTT 59.235 41.667 8.61 4.18 35.97 3.16
28 29 4.332828 GGTGGCTCCATAAAGTTAACAGT 58.667 43.478 8.61 0.00 35.97 3.55
29 30 3.374058 CGGTGGCTCCATAAAGTTAACAG 59.626 47.826 8.61 0.00 35.57 3.16
30 31 3.244630 ACGGTGGCTCCATAAAGTTAACA 60.245 43.478 8.61 0.00 35.57 2.41
31 32 3.126343 CACGGTGGCTCCATAAAGTTAAC 59.874 47.826 6.39 0.00 35.57 2.01
32 33 3.340034 CACGGTGGCTCCATAAAGTTAA 58.660 45.455 6.39 0.00 35.57 2.01
33 34 2.937873 GCACGGTGGCTCCATAAAGTTA 60.938 50.000 10.60 0.00 35.57 2.24
34 35 1.821216 CACGGTGGCTCCATAAAGTT 58.179 50.000 6.39 0.00 35.57 2.66
35 36 0.676782 GCACGGTGGCTCCATAAAGT 60.677 55.000 10.60 0.00 35.57 2.66
36 37 0.392998 AGCACGGTGGCTCCATAAAG 60.393 55.000 10.60 0.00 41.05 1.85
37 38 1.682849 AGCACGGTGGCTCCATAAA 59.317 52.632 10.60 0.00 41.05 1.40
38 39 3.399046 AGCACGGTGGCTCCATAA 58.601 55.556 10.60 0.00 41.05 1.90
54 55 2.912542 TATCTCCAGGGCGCCGAG 60.913 66.667 22.54 21.16 0.00 4.63
55 56 2.912542 CTATCTCCAGGGCGCCGA 60.913 66.667 22.54 12.35 0.00 5.54
56 57 2.912542 TCTATCTCCAGGGCGCCG 60.913 66.667 22.54 7.47 0.00 6.46
57 58 3.055580 CTCTATCTCCAGGGCGCC 58.944 66.667 21.18 21.18 0.00 6.53
58 59 2.032860 TTGCTCTATCTCCAGGGCGC 62.033 60.000 0.00 0.00 45.59 6.53
59 60 0.249657 GTTGCTCTATCTCCAGGGCG 60.250 60.000 0.00 0.00 45.59 6.13
60 61 0.107643 GGTTGCTCTATCTCCAGGGC 59.892 60.000 0.00 0.00 42.76 5.19
61 62 1.500474 TGGTTGCTCTATCTCCAGGG 58.500 55.000 0.00 0.00 0.00 4.45
62 63 2.702478 TGATGGTTGCTCTATCTCCAGG 59.298 50.000 7.16 0.00 35.48 4.45
63 64 4.316645 CATGATGGTTGCTCTATCTCCAG 58.683 47.826 0.00 0.00 35.48 3.86
64 65 3.495629 GCATGATGGTTGCTCTATCTCCA 60.496 47.826 0.00 0.00 37.14 3.86
65 66 3.072944 GCATGATGGTTGCTCTATCTCC 58.927 50.000 0.00 0.00 37.14 3.71
66 67 3.072944 GGCATGATGGTTGCTCTATCTC 58.927 50.000 0.00 0.00 40.03 2.75
67 68 2.709934 AGGCATGATGGTTGCTCTATCT 59.290 45.455 0.00 0.00 40.03 1.98
68 69 3.137446 AGGCATGATGGTTGCTCTATC 57.863 47.619 0.00 0.00 40.03 2.08
69 70 3.220110 CAAGGCATGATGGTTGCTCTAT 58.780 45.455 0.00 0.00 40.03 1.98
70 71 2.646930 CAAGGCATGATGGTTGCTCTA 58.353 47.619 0.00 0.00 40.03 2.43
71 72 1.471119 CAAGGCATGATGGTTGCTCT 58.529 50.000 0.00 0.00 40.03 4.09
72 73 0.458669 CCAAGGCATGATGGTTGCTC 59.541 55.000 0.00 0.00 40.03 4.26
73 74 2.587080 CCAAGGCATGATGGTTGCT 58.413 52.632 0.00 0.00 40.03 3.91
78 79 2.133281 TTGAGACCAAGGCATGATGG 57.867 50.000 0.00 3.81 42.60 3.51
79 80 3.087031 AGTTTGAGACCAAGGCATGATG 58.913 45.455 0.00 0.00 33.23 3.07
80 81 3.009916 AGAGTTTGAGACCAAGGCATGAT 59.990 43.478 0.00 0.00 33.23 2.45
81 82 2.373169 AGAGTTTGAGACCAAGGCATGA 59.627 45.455 0.00 0.00 33.23 3.07
82 83 2.787994 AGAGTTTGAGACCAAGGCATG 58.212 47.619 0.00 0.00 33.23 4.06
83 84 3.515602 AAGAGTTTGAGACCAAGGCAT 57.484 42.857 0.00 0.00 33.23 4.40
84 85 3.297134 AAAGAGTTTGAGACCAAGGCA 57.703 42.857 0.00 0.00 33.23 4.75
85 86 3.243535 CCAAAAGAGTTTGAGACCAAGGC 60.244 47.826 0.81 0.00 45.99 4.35
86 87 3.243535 GCCAAAAGAGTTTGAGACCAAGG 60.244 47.826 0.81 0.00 45.99 3.61
87 88 3.633986 AGCCAAAAGAGTTTGAGACCAAG 59.366 43.478 0.81 0.00 45.99 3.61
88 89 3.631250 AGCCAAAAGAGTTTGAGACCAA 58.369 40.909 0.81 0.00 45.99 3.67
89 90 3.297134 AGCCAAAAGAGTTTGAGACCA 57.703 42.857 0.81 0.00 45.99 4.02
90 91 4.822350 ACTAAGCCAAAAGAGTTTGAGACC 59.178 41.667 0.81 0.00 45.99 3.85
91 92 6.378710 AACTAAGCCAAAAGAGTTTGAGAC 57.621 37.500 0.81 0.00 45.99 3.36
92 93 7.404671 AAAACTAAGCCAAAAGAGTTTGAGA 57.595 32.000 0.81 0.00 45.99 3.27
93 94 7.010460 CCAAAAACTAAGCCAAAAGAGTTTGAG 59.990 37.037 0.81 0.00 45.99 3.02
94 95 6.816140 CCAAAAACTAAGCCAAAAGAGTTTGA 59.184 34.615 0.81 0.00 45.99 2.69
95 96 6.456853 GCCAAAAACTAAGCCAAAAGAGTTTG 60.457 38.462 0.01 0.00 40.36 2.93
96 97 5.584649 GCCAAAAACTAAGCCAAAAGAGTTT 59.415 36.000 0.00 0.00 42.45 2.66
97 98 5.116180 GCCAAAAACTAAGCCAAAAGAGTT 58.884 37.500 0.00 0.00 33.60 3.01
98 99 4.161377 TGCCAAAAACTAAGCCAAAAGAGT 59.839 37.500 0.00 0.00 0.00 3.24
99 100 4.692228 TGCCAAAAACTAAGCCAAAAGAG 58.308 39.130 0.00 0.00 0.00 2.85
100 101 4.744795 TGCCAAAAACTAAGCCAAAAGA 57.255 36.364 0.00 0.00 0.00 2.52
101 102 6.223120 ACTATGCCAAAAACTAAGCCAAAAG 58.777 36.000 0.00 0.00 0.00 2.27
102 103 6.168270 ACTATGCCAAAAACTAAGCCAAAA 57.832 33.333 0.00 0.00 0.00 2.44
103 104 5.799827 ACTATGCCAAAAACTAAGCCAAA 57.200 34.783 0.00 0.00 0.00 3.28
104 105 5.799827 AACTATGCCAAAAACTAAGCCAA 57.200 34.783 0.00 0.00 0.00 4.52
105 106 5.799827 AAACTATGCCAAAAACTAAGCCA 57.200 34.783 0.00 0.00 0.00 4.75
106 107 5.805486 GCTAAACTATGCCAAAAACTAAGCC 59.195 40.000 0.00 0.00 0.00 4.35
107 108 6.621613 AGCTAAACTATGCCAAAAACTAAGC 58.378 36.000 0.00 0.00 0.00 3.09
108 109 7.062255 GCAAGCTAAACTATGCCAAAAACTAAG 59.938 37.037 0.00 0.00 32.73 2.18
109 110 6.866248 GCAAGCTAAACTATGCCAAAAACTAA 59.134 34.615 0.00 0.00 32.73 2.24
110 111 6.386654 GCAAGCTAAACTATGCCAAAAACTA 58.613 36.000 0.00 0.00 32.73 2.24
111 112 5.230182 GCAAGCTAAACTATGCCAAAAACT 58.770 37.500 0.00 0.00 32.73 2.66
112 113 5.515548 GCAAGCTAAACTATGCCAAAAAC 57.484 39.130 0.00 0.00 32.73 2.43
138 139 2.817056 GGGAGAGGGGAGCATGAGC 61.817 68.421 0.00 0.00 42.56 4.26
139 140 2.146061 GGGGAGAGGGGAGCATGAG 61.146 68.421 0.00 0.00 0.00 2.90
140 141 2.040464 GGGGAGAGGGGAGCATGA 60.040 66.667 0.00 0.00 0.00 3.07
141 142 2.040043 AGGGGAGAGGGGAGCATG 60.040 66.667 0.00 0.00 0.00 4.06
142 143 2.040043 CAGGGGAGAGGGGAGCAT 60.040 66.667 0.00 0.00 0.00 3.79
143 144 3.194025 AACAGGGGAGAGGGGAGCA 62.194 63.158 0.00 0.00 0.00 4.26
144 145 2.285743 AACAGGGGAGAGGGGAGC 60.286 66.667 0.00 0.00 0.00 4.70
145 146 0.689412 GAGAACAGGGGAGAGGGGAG 60.689 65.000 0.00 0.00 0.00 4.30
146 147 1.156322 AGAGAACAGGGGAGAGGGGA 61.156 60.000 0.00 0.00 0.00 4.81
147 148 0.689412 GAGAGAACAGGGGAGAGGGG 60.689 65.000 0.00 0.00 0.00 4.79
148 149 0.338120 AGAGAGAACAGGGGAGAGGG 59.662 60.000 0.00 0.00 0.00 4.30
149 150 2.107366 GAAGAGAGAACAGGGGAGAGG 58.893 57.143 0.00 0.00 0.00 3.69
150 151 2.107366 GGAAGAGAGAACAGGGGAGAG 58.893 57.143 0.00 0.00 0.00 3.20
151 152 1.433199 TGGAAGAGAGAACAGGGGAGA 59.567 52.381 0.00 0.00 0.00 3.71
152 153 1.830477 CTGGAAGAGAGAACAGGGGAG 59.170 57.143 0.00 0.00 34.07 4.30
153 154 1.553417 CCTGGAAGAGAGAACAGGGGA 60.553 57.143 0.00 0.00 45.21 4.81
154 155 0.908198 CCTGGAAGAGAGAACAGGGG 59.092 60.000 0.00 0.00 45.21 4.79
157 158 2.566724 AGAAGCCTGGAAGAGAGAACAG 59.433 50.000 0.00 0.00 34.07 3.16
158 159 2.564947 GAGAAGCCTGGAAGAGAGAACA 59.435 50.000 0.00 0.00 34.07 3.18
159 160 2.564947 TGAGAAGCCTGGAAGAGAGAAC 59.435 50.000 0.00 0.00 34.07 3.01
160 161 2.894731 TGAGAAGCCTGGAAGAGAGAA 58.105 47.619 0.00 0.00 34.07 2.87
161 162 2.612285 TGAGAAGCCTGGAAGAGAGA 57.388 50.000 0.00 0.00 34.07 3.10
162 163 2.158928 CCATGAGAAGCCTGGAAGAGAG 60.159 54.545 0.00 0.00 34.07 3.20
163 164 1.836166 CCATGAGAAGCCTGGAAGAGA 59.164 52.381 0.00 0.00 34.07 3.10
164 165 1.836166 TCCATGAGAAGCCTGGAAGAG 59.164 52.381 0.00 0.00 36.15 2.85
165 166 1.556911 GTCCATGAGAAGCCTGGAAGA 59.443 52.381 0.00 0.00 40.61 2.87
166 167 1.558756 AGTCCATGAGAAGCCTGGAAG 59.441 52.381 0.00 0.00 40.61 3.46
167 168 1.661463 AGTCCATGAGAAGCCTGGAA 58.339 50.000 0.00 0.00 40.61 3.53
168 169 1.280133 CAAGTCCATGAGAAGCCTGGA 59.720 52.381 0.00 0.00 36.73 3.86
169 170 1.747709 CAAGTCCATGAGAAGCCTGG 58.252 55.000 0.00 0.00 0.00 4.45
170 171 1.093159 GCAAGTCCATGAGAAGCCTG 58.907 55.000 0.00 0.00 0.00 4.85
171 172 0.694771 TGCAAGTCCATGAGAAGCCT 59.305 50.000 0.00 0.00 0.00 4.58
172 173 0.807496 GTGCAAGTCCATGAGAAGCC 59.193 55.000 0.00 0.00 0.00 4.35
173 174 0.807496 GGTGCAAGTCCATGAGAAGC 59.193 55.000 0.00 0.00 0.00 3.86
174 175 1.808945 GTGGTGCAAGTCCATGAGAAG 59.191 52.381 0.00 0.00 37.30 2.85
175 176 1.877680 CGTGGTGCAAGTCCATGAGAA 60.878 52.381 8.07 0.00 42.63 2.87
176 177 0.320683 CGTGGTGCAAGTCCATGAGA 60.321 55.000 8.07 0.00 42.63 3.27
177 178 1.300971 CCGTGGTGCAAGTCCATGAG 61.301 60.000 14.11 2.89 42.63 2.90
178 179 1.302431 CCGTGGTGCAAGTCCATGA 60.302 57.895 14.11 0.00 42.63 3.07
179 180 1.600636 ACCGTGGTGCAAGTCCATG 60.601 57.895 7.00 7.00 40.50 3.66
180 181 1.600636 CACCGTGGTGCAAGTCCAT 60.601 57.895 6.03 0.00 39.39 3.41
181 182 2.203139 CACCGTGGTGCAAGTCCA 60.203 61.111 6.03 0.00 39.39 4.02
190 191 1.472480 GCTCATATTTTGCACCGTGGT 59.528 47.619 0.00 0.00 0.00 4.16
191 192 1.202290 GGCTCATATTTTGCACCGTGG 60.202 52.381 0.00 0.00 0.00 4.94
192 193 1.202290 GGGCTCATATTTTGCACCGTG 60.202 52.381 0.00 0.00 0.00 4.94
193 194 1.102978 GGGCTCATATTTTGCACCGT 58.897 50.000 0.00 0.00 0.00 4.83
194 195 0.385390 GGGGCTCATATTTTGCACCG 59.615 55.000 0.00 0.00 40.66 4.94
196 197 2.431782 ACATGGGGCTCATATTTTGCAC 59.568 45.455 0.00 0.00 34.12 4.57
197 198 2.749600 ACATGGGGCTCATATTTTGCA 58.250 42.857 0.00 0.00 34.12 4.08
198 199 3.005791 GGTACATGGGGCTCATATTTTGC 59.994 47.826 0.00 0.00 34.12 3.68
199 200 3.253188 CGGTACATGGGGCTCATATTTTG 59.747 47.826 0.00 0.00 34.12 2.44
200 201 3.137544 TCGGTACATGGGGCTCATATTTT 59.862 43.478 0.00 0.00 34.12 1.82
201 202 2.708861 TCGGTACATGGGGCTCATATTT 59.291 45.455 0.00 0.00 34.12 1.40
202 203 2.334977 TCGGTACATGGGGCTCATATT 58.665 47.619 0.00 0.00 34.12 1.28
203 204 2.024176 TCGGTACATGGGGCTCATAT 57.976 50.000 0.00 0.00 34.12 1.78
204 205 1.899814 GATCGGTACATGGGGCTCATA 59.100 52.381 0.00 0.00 34.12 2.15
205 206 0.687354 GATCGGTACATGGGGCTCAT 59.313 55.000 0.00 0.00 36.31 2.90
206 207 0.398522 AGATCGGTACATGGGGCTCA 60.399 55.000 0.00 0.00 0.00 4.26
207 208 0.759346 AAGATCGGTACATGGGGCTC 59.241 55.000 0.00 0.00 0.00 4.70
208 209 2.097110 TAAGATCGGTACATGGGGCT 57.903 50.000 0.00 0.00 0.00 5.19
209 210 2.301870 TCATAAGATCGGTACATGGGGC 59.698 50.000 0.00 0.00 0.00 5.80
210 211 4.759782 GATCATAAGATCGGTACATGGGG 58.240 47.826 0.00 0.00 41.12 4.96
222 223 4.392940 CCGAAGCCAAAGGATCATAAGAT 58.607 43.478 0.00 0.00 37.13 2.40
223 224 3.808728 CCGAAGCCAAAGGATCATAAGA 58.191 45.455 0.00 0.00 0.00 2.10
224 225 2.291741 GCCGAAGCCAAAGGATCATAAG 59.708 50.000 0.00 0.00 0.00 1.73
225 226 2.297701 GCCGAAGCCAAAGGATCATAA 58.702 47.619 0.00 0.00 0.00 1.90
226 227 1.967319 GCCGAAGCCAAAGGATCATA 58.033 50.000 0.00 0.00 0.00 2.15
227 228 2.799176 GCCGAAGCCAAAGGATCAT 58.201 52.632 0.00 0.00 0.00 2.45
228 229 4.319133 GCCGAAGCCAAAGGATCA 57.681 55.556 0.00 0.00 0.00 2.92
238 239 7.084486 CCTTATATATTTCAAAAGGCCGAAGC 58.916 38.462 0.00 0.00 38.76 3.86
239 240 8.166422 ACCTTATATATTTCAAAAGGCCGAAG 57.834 34.615 10.07 0.00 40.33 3.79
240 241 9.280174 CTACCTTATATATTTCAAAAGGCCGAA 57.720 33.333 10.07 0.00 40.33 4.30
241 242 8.653191 TCTACCTTATATATTTCAAAAGGCCGA 58.347 33.333 10.07 5.51 40.33 5.54
242 243 8.842358 TCTACCTTATATATTTCAAAAGGCCG 57.158 34.615 10.07 3.74 40.33 6.13
295 296 7.543359 TTGATTGGTCCTCTTGATGATTTTT 57.457 32.000 0.00 0.00 0.00 1.94
338 339 1.065418 AGAGTTTTCATGGGCTACCGG 60.065 52.381 0.00 0.00 40.75 5.28
358 359 0.038166 GGGCAAGGGATCAACAGTCA 59.962 55.000 0.00 0.00 0.00 3.41
418 419 2.951726 TCTTGCATCTCTCACGTCTTG 58.048 47.619 0.00 0.00 0.00 3.02
556 558 1.331756 GGCTATGTTTGGAGACATGCG 59.668 52.381 0.00 0.00 40.33 4.73
614 619 1.792301 CTCAACACGGAGCAGCATG 59.208 57.895 0.00 0.00 40.87 4.06
615 620 4.291047 CTCAACACGGAGCAGCAT 57.709 55.556 0.00 0.00 0.00 3.79
621 626 2.738213 AAGCCCAGCTCAACACGGAG 62.738 60.000 0.00 0.00 38.25 4.63
645 650 2.579787 GGATGAGCGTCACGTCCG 60.580 66.667 0.00 0.00 34.43 4.79
705 710 6.791867 TCCGAGAAGATTTTCCAGATCTTA 57.208 37.500 0.00 0.00 42.34 2.10
713 718 4.152580 GTCACTGTTCCGAGAAGATTTTCC 59.847 45.833 0.00 0.00 33.64 3.13
784 789 2.499289 AGAGCAAGGTTCGATCATGAGT 59.501 45.455 0.09 0.00 0.00 3.41
785 790 2.864946 CAGAGCAAGGTTCGATCATGAG 59.135 50.000 0.09 0.00 0.00 2.90
804 833 2.103143 CGCGTACTCAGAGGCCAG 59.897 66.667 5.01 0.00 0.00 4.85
824 854 9.331466 ACCCAGAGATCACTATTCATTGTATAT 57.669 33.333 0.00 0.00 0.00 0.86
825 855 8.727100 ACCCAGAGATCACTATTCATTGTATA 57.273 34.615 0.00 0.00 0.00 1.47
826 856 7.623999 ACCCAGAGATCACTATTCATTGTAT 57.376 36.000 0.00 0.00 0.00 2.29
827 857 8.547481 TTACCCAGAGATCACTATTCATTGTA 57.453 34.615 0.00 0.00 0.00 2.41
830 860 6.100279 TGCTTACCCAGAGATCACTATTCATT 59.900 38.462 0.00 0.00 0.00 2.57
832 862 4.962362 TGCTTACCCAGAGATCACTATTCA 59.038 41.667 0.00 0.00 0.00 2.57
833 863 5.537300 TGCTTACCCAGAGATCACTATTC 57.463 43.478 0.00 0.00 0.00 1.75
834 864 5.663106 TCTTGCTTACCCAGAGATCACTATT 59.337 40.000 0.00 0.00 0.00 1.73
835 865 5.069781 GTCTTGCTTACCCAGAGATCACTAT 59.930 44.000 0.00 0.00 0.00 2.12
836 866 4.402793 GTCTTGCTTACCCAGAGATCACTA 59.597 45.833 0.00 0.00 0.00 2.74
837 867 3.196685 GTCTTGCTTACCCAGAGATCACT 59.803 47.826 0.00 0.00 0.00 3.41
838 868 3.526534 GTCTTGCTTACCCAGAGATCAC 58.473 50.000 0.00 0.00 0.00 3.06
873 903 0.322098 CGCCACCTGGGAAACATACA 60.322 55.000 0.00 0.00 40.01 2.29
874 904 1.029947 CCGCCACCTGGGAAACATAC 61.030 60.000 0.00 0.00 40.01 2.39
875 905 1.301623 CCGCCACCTGGGAAACATA 59.698 57.895 0.00 0.00 40.01 2.29
876 906 2.035626 CCGCCACCTGGGAAACAT 59.964 61.111 0.00 0.00 40.01 2.71
898 928 1.656263 TGATAATCGTCGCCGTCGC 60.656 57.895 0.00 0.00 35.26 5.19
921 951 4.465632 TTACACACGCATCATAGTCCTT 57.534 40.909 0.00 0.00 0.00 3.36
922 952 4.141937 ACATTACACACGCATCATAGTCCT 60.142 41.667 0.00 0.00 0.00 3.85
923 953 4.119862 ACATTACACACGCATCATAGTCC 58.880 43.478 0.00 0.00 0.00 3.85
925 955 4.201812 GCAACATTACACACGCATCATAGT 60.202 41.667 0.00 0.00 0.00 2.12
926 956 4.034394 AGCAACATTACACACGCATCATAG 59.966 41.667 0.00 0.00 0.00 2.23
927 957 3.938334 AGCAACATTACACACGCATCATA 59.062 39.130 0.00 0.00 0.00 2.15
965 995 4.262249 GGTAATGGCTCTCACCTCTCATAC 60.262 50.000 0.00 0.00 0.00 2.39
991 1065 0.036952 ACTGGATCAACAGACAGCGG 60.037 55.000 6.04 0.00 40.97 5.52
1063 1137 2.369860 AGCCTAGCAGCAGCATATTGTA 59.630 45.455 3.17 0.00 45.49 2.41
1182 1264 0.332293 TTGCAGCAGGATGGAATGGA 59.668 50.000 0.00 0.00 35.86 3.41
1183 1265 1.410004 ATTGCAGCAGGATGGAATGG 58.590 50.000 3.46 0.00 39.44 3.16
1184 1266 2.223971 GGAATTGCAGCAGGATGGAATG 60.224 50.000 5.06 0.00 39.93 2.67
1185 1267 2.037144 GGAATTGCAGCAGGATGGAAT 58.963 47.619 0.00 0.00 42.27 3.01
1186 1268 1.272592 TGGAATTGCAGCAGGATGGAA 60.273 47.619 0.00 0.00 35.86 3.53
1201 1283 0.613260 TGTAAGCTCAGCGGTGGAAT 59.387 50.000 15.67 1.72 0.00 3.01
1202 1284 0.037326 CTGTAAGCTCAGCGGTGGAA 60.037 55.000 15.67 0.00 0.00 3.53
1205 1287 1.448540 CCCTGTAAGCTCAGCGGTG 60.449 63.158 8.67 8.67 34.47 4.94
1212 1294 3.515901 TCTCTTTCTTCCCCTGTAAGCTC 59.484 47.826 0.00 0.00 0.00 4.09
1219 1301 2.224621 TGCAACTCTCTTTCTTCCCCTG 60.225 50.000 0.00 0.00 0.00 4.45
1220 1302 2.039613 CTGCAACTCTCTTTCTTCCCCT 59.960 50.000 0.00 0.00 0.00 4.79
1221 1303 2.431454 CTGCAACTCTCTTTCTTCCCC 58.569 52.381 0.00 0.00 0.00 4.81
1224 1306 3.249559 CACACCTGCAACTCTCTTTCTTC 59.750 47.826 0.00 0.00 0.00 2.87
1225 1307 3.209410 CACACCTGCAACTCTCTTTCTT 58.791 45.455 0.00 0.00 0.00 2.52
1382 1507 2.733552 GCAGATGCGTCATATGTGTAGG 59.266 50.000 8.99 0.00 35.75 3.18
1395 1520 0.449388 GACCAGAAAAGGCAGATGCG 59.551 55.000 0.00 0.00 43.26 4.73
1471 1630 2.071540 TCACTCGCTGCAAAGAGAATG 58.928 47.619 20.76 11.79 37.87 2.67
1509 1668 3.181454 ACGAACTGGTTCATTGTTCCTCT 60.181 43.478 12.94 0.00 39.46 3.69
1546 1705 3.499737 CGTCTCCCATGTTGCCGC 61.500 66.667 0.00 0.00 0.00 6.53
1608 1767 9.671279 ATTGGTTGTTTCAAGAAAGAAAAAGAT 57.329 25.926 6.69 0.00 39.05 2.40
1616 1775 4.379652 CCCCATTGGTTGTTTCAAGAAAG 58.620 43.478 1.20 0.00 0.00 2.62
1617 1776 3.135530 CCCCCATTGGTTGTTTCAAGAAA 59.864 43.478 1.20 0.00 0.00 2.52
1620 1779 1.270785 GCCCCCATTGGTTGTTTCAAG 60.271 52.381 1.20 0.00 0.00 3.02
1621 1780 0.761802 GCCCCCATTGGTTGTTTCAA 59.238 50.000 1.20 0.00 0.00 2.69
1622 1781 0.105246 AGCCCCCATTGGTTGTTTCA 60.105 50.000 1.20 0.00 0.00 2.69
1623 1782 0.608130 GAGCCCCCATTGGTTGTTTC 59.392 55.000 1.20 0.00 0.00 2.78
1624 1783 1.184970 CGAGCCCCCATTGGTTGTTT 61.185 55.000 1.20 0.00 0.00 2.83
1625 1784 1.606313 CGAGCCCCCATTGGTTGTT 60.606 57.895 1.20 0.00 0.00 2.83
1626 1785 2.035626 CGAGCCCCCATTGGTTGT 59.964 61.111 1.20 0.00 0.00 3.32
1631 1790 1.529244 GATTCCCGAGCCCCCATTG 60.529 63.158 0.00 0.00 0.00 2.82
1632 1791 2.768022 GGATTCCCGAGCCCCCATT 61.768 63.158 0.00 0.00 0.00 3.16
1654 1813 6.127814 CCACATGCAAGAATCAGACAATAAGT 60.128 38.462 0.00 0.00 0.00 2.24
1655 1814 6.263344 CCACATGCAAGAATCAGACAATAAG 58.737 40.000 0.00 0.00 0.00 1.73
1656 1815 5.393352 GCCACATGCAAGAATCAGACAATAA 60.393 40.000 0.00 0.00 40.77 1.40
1657 1816 4.096833 GCCACATGCAAGAATCAGACAATA 59.903 41.667 0.00 0.00 40.77 1.90
1658 1817 3.119245 GCCACATGCAAGAATCAGACAAT 60.119 43.478 0.00 0.00 40.77 2.71
1659 1818 2.229543 GCCACATGCAAGAATCAGACAA 59.770 45.455 0.00 0.00 40.77 3.18
1662 1821 1.089112 CGCCACATGCAAGAATCAGA 58.911 50.000 0.00 0.00 41.33 3.27
1685 1844 4.821589 GTCTTCGCCGCTGGAGGG 62.822 72.222 0.00 0.00 0.00 4.30
1822 1981 3.873828 GACCGAGTAGTCGTCTTCG 57.126 57.895 18.23 5.52 45.30 3.79
1939 2098 4.421479 CTTCGGAGCGCGGTCACT 62.421 66.667 35.80 12.40 0.00 3.41
2019 2178 3.443925 CCTCTGACGCCAGCGAGA 61.444 66.667 20.32 10.96 42.83 4.04
2050 2209 0.470341 TGGAACCAATCGTGACCACA 59.530 50.000 0.85 0.00 30.09 4.17
2062 2221 2.606519 CCGACCCTCCTGGAACCA 60.607 66.667 0.00 0.00 38.00 3.67
2158 2317 3.058160 CTGGCCTCCTTGCGGTTG 61.058 66.667 3.32 0.00 0.00 3.77
2159 2318 4.351054 CCTGGCCTCCTTGCGGTT 62.351 66.667 3.32 0.00 0.00 4.44
2162 2321 4.785453 GTCCCTGGCCTCCTTGCG 62.785 72.222 3.32 0.00 0.00 4.85
2166 2325 1.623625 CTAGAGTCCCTGGCCTCCT 59.376 63.158 3.32 0.00 0.00 3.69
2180 2339 1.035932 GCGCTGTGGTAGGACCTAGA 61.036 60.000 0.00 0.00 39.58 2.43
2303 2462 4.695231 CGTCACGTCGGCGGAGTT 62.695 66.667 16.39 0.00 43.45 3.01
2398 2557 4.732672 AGTAGGACGAAGGTGTTAATCC 57.267 45.455 0.00 0.00 0.00 3.01
2405 2564 1.811359 ACTCGAAGTAGGACGAAGGTG 59.189 52.381 0.00 0.00 38.05 4.00
2415 2574 5.379732 AGAGTCAAGGAAACTCGAAGTAG 57.620 43.478 0.00 0.00 46.23 2.57
2435 2603 1.380302 GCCAAGAAGAGGCCCAAGA 59.620 57.895 0.00 0.00 46.50 3.02
2436 2604 4.009015 GCCAAGAAGAGGCCCAAG 57.991 61.111 0.00 0.00 46.50 3.61
2442 2610 1.379044 AATGGCGGCCAAGAAGAGG 60.379 57.895 27.70 0.00 36.95 3.69
2443 2611 1.805254 CAATGGCGGCCAAGAAGAG 59.195 57.895 27.70 8.44 36.95 2.85
2444 2612 2.342650 GCAATGGCGGCCAAGAAGA 61.343 57.895 27.70 0.27 36.95 2.87
2445 2613 2.182537 GCAATGGCGGCCAAGAAG 59.817 61.111 27.70 16.32 36.95 2.85
2469 2637 1.913317 CATCGATCACGCAGAACAGA 58.087 50.000 0.00 0.00 39.58 3.41
2470 2638 0.299895 GCATCGATCACGCAGAACAG 59.700 55.000 0.00 0.00 39.58 3.16
2484 2652 0.103937 GTCCCTTCTCCTCTGCATCG 59.896 60.000 0.00 0.00 0.00 3.84
2570 2738 3.129300 CGAAGCTGCGGAGGGATA 58.871 61.111 6.07 0.00 0.00 2.59
2605 2778 9.574458 TGCTAAGAGTTATATATTGAAGATCGC 57.426 33.333 0.00 0.00 0.00 4.58
2613 2786 8.479313 TCGCCATTGCTAAGAGTTATATATTG 57.521 34.615 0.00 0.00 34.43 1.90
2620 2793 3.466836 CCATCGCCATTGCTAAGAGTTA 58.533 45.455 0.00 0.00 34.43 2.24
2621 2794 2.292267 CCATCGCCATTGCTAAGAGTT 58.708 47.619 0.00 0.00 34.43 3.01
2622 2795 1.959042 CCATCGCCATTGCTAAGAGT 58.041 50.000 0.00 0.00 34.43 3.24
2625 2798 1.159713 TCGCCATCGCCATTGCTAAG 61.160 55.000 0.00 0.00 35.26 2.18
2626 2799 0.534877 ATCGCCATCGCCATTGCTAA 60.535 50.000 0.00 0.00 35.26 3.09
2627 2800 0.950555 GATCGCCATCGCCATTGCTA 60.951 55.000 0.00 0.00 35.26 3.49
2628 2801 2.203252 ATCGCCATCGCCATTGCT 60.203 55.556 0.00 0.00 35.26 3.91
2629 2802 2.253452 GATCGCCATCGCCATTGC 59.747 61.111 0.00 0.00 35.26 3.56
2630 2803 2.552768 CGATCGCCATCGCCATTG 59.447 61.111 0.26 0.00 45.28 2.82
2659 2832 2.009774 AGAATTCGATGCCAAGAACGG 58.990 47.619 0.00 0.00 0.00 4.44
2880 3054 6.764308 ATTCTGGGTCATTTGAACTGTATG 57.236 37.500 0.00 0.00 31.02 2.39
2920 3094 4.385244 ACAAAGTAAAGCGATCACGAAC 57.615 40.909 0.00 0.00 42.66 3.95
2978 3153 9.878667 TGACTTGTCAAATTCCTAAATACGATA 57.121 29.630 0.44 0.00 0.00 2.92
2992 3167 9.220767 GATTCTTAGTAGGTTGACTTGTCAAAT 57.779 33.333 16.46 11.35 0.00 2.32
3245 3510 8.741603 TCATCTAGATCTGATCATTTTTGCAA 57.258 30.769 19.12 0.00 0.00 4.08
3246 3511 8.208903 TCTCATCTAGATCTGATCATTTTTGCA 58.791 33.333 19.12 0.00 0.00 4.08
3247 3512 8.497554 GTCTCATCTAGATCTGATCATTTTTGC 58.502 37.037 19.12 0.00 36.36 3.68
3248 3513 9.767228 AGTCTCATCTAGATCTGATCATTTTTG 57.233 33.333 19.12 9.92 36.36 2.44
3251 3516 9.767228 CAAAGTCTCATCTAGATCTGATCATTT 57.233 33.333 19.12 2.06 36.36 2.32
3307 3572 5.200483 AGAAGGAAAATGAGACCACACAAA 58.800 37.500 0.00 0.00 0.00 2.83
3390 3655 2.094803 TGCGGAAGTAAACATGCCAATG 60.095 45.455 0.00 0.00 39.89 2.82
3391 3656 2.094752 GTGCGGAAGTAAACATGCCAAT 60.095 45.455 0.00 0.00 0.00 3.16
3393 3658 0.878416 GTGCGGAAGTAAACATGCCA 59.122 50.000 0.00 0.00 0.00 4.92
3394 3659 0.878416 TGTGCGGAAGTAAACATGCC 59.122 50.000 0.00 0.00 0.00 4.40
3396 3661 2.159627 GGAGTGTGCGGAAGTAAACATG 59.840 50.000 0.00 0.00 36.27 3.21
3397 3662 2.224426 TGGAGTGTGCGGAAGTAAACAT 60.224 45.455 0.00 0.00 36.27 2.71
3401 7761 0.753867 TGTGGAGTGTGCGGAAGTAA 59.246 50.000 0.00 0.00 0.00 2.24
3413 7773 1.470051 GGGTTGTTTGTGTGTGGAGT 58.530 50.000 0.00 0.00 0.00 3.85
3449 7813 1.004918 ACTGTAACTGCACGCCCTC 60.005 57.895 0.00 0.00 0.00 4.30
3454 7818 1.736645 CCCCGACTGTAACTGCACG 60.737 63.158 0.00 0.00 0.00 5.34
3463 7827 1.412453 TAAGTGTTGGCCCCGACTGT 61.412 55.000 0.00 0.00 0.00 3.55
3525 7889 8.296000 GGTTGCAAAAGTGGCATTTTAAATATT 58.704 29.630 8.47 0.00 41.58 1.28
3584 7949 1.291877 GACTGCAACTACACGCCCAG 61.292 60.000 0.00 0.00 0.00 4.45
3588 7953 1.291877 CCCTGACTGCAACTACACGC 61.292 60.000 0.00 0.00 0.00 5.34
3593 7958 4.030913 AGTATTAGCCCTGACTGCAACTA 58.969 43.478 0.00 0.00 0.00 2.24
3599 7964 3.201290 CTGCAAGTATTAGCCCTGACTG 58.799 50.000 0.00 0.00 0.00 3.51
3633 7998 1.588082 GGCAGTTGCATGTCCCTTG 59.412 57.895 6.43 0.00 44.36 3.61
3640 8005 3.384532 GGGGTGGGCAGTTGCATG 61.385 66.667 6.43 0.00 44.36 4.06
3644 8009 3.636231 TCGAGGGGTGGGCAGTTG 61.636 66.667 0.00 0.00 0.00 3.16
3664 8029 1.210155 GGTTGCAGACGTGGCATTC 59.790 57.895 11.79 8.53 41.58 2.67
3694 8059 1.539827 AGCGACAACAATTTGGGCTAC 59.460 47.619 0.78 0.00 41.88 3.58
3695 8060 1.904287 AGCGACAACAATTTGGGCTA 58.096 45.000 0.78 0.00 41.88 3.93
3697 8062 1.418373 GAAGCGACAACAATTTGGGC 58.582 50.000 0.78 0.00 37.00 5.36
3860 8227 4.595762 AGTGTCCACGCTAAGTTAAGAA 57.404 40.909 0.00 0.00 34.49 2.52
3862 8229 4.304110 TCAAGTGTCCACGCTAAGTTAAG 58.696 43.478 0.00 0.00 35.32 1.85
3863 8230 4.325028 TCAAGTGTCCACGCTAAGTTAA 57.675 40.909 0.00 0.00 35.32 2.01
3866 8233 2.755650 CTTCAAGTGTCCACGCTAAGT 58.244 47.619 0.00 0.00 35.32 2.24
3867 8234 1.461127 GCTTCAAGTGTCCACGCTAAG 59.539 52.381 0.00 0.00 35.32 2.18
3868 8235 1.070134 AGCTTCAAGTGTCCACGCTAA 59.930 47.619 0.00 0.00 35.32 3.09
3869 8236 0.679505 AGCTTCAAGTGTCCACGCTA 59.320 50.000 0.00 0.00 35.32 4.26
3870 8237 0.882042 CAGCTTCAAGTGTCCACGCT 60.882 55.000 0.00 0.00 38.54 5.07
3872 8239 0.583438 CACAGCTTCAAGTGTCCACG 59.417 55.000 0.00 0.00 36.20 4.94
3873 8240 1.331756 CACACAGCTTCAAGTGTCCAC 59.668 52.381 4.67 0.00 46.44 4.02
3874 8241 1.065491 ACACACAGCTTCAAGTGTCCA 60.065 47.619 4.67 0.00 46.44 4.02
3875 8242 1.668419 ACACACAGCTTCAAGTGTCC 58.332 50.000 4.67 0.00 46.44 4.02
3887 8254 1.880675 AGTCCGACACTAGACACACAG 59.119 52.381 0.00 0.00 35.38 3.66
3936 8303 1.152074 TCCGGGGGTTGGACAACTA 60.152 57.895 14.14 0.00 40.94 2.24
3943 8310 4.078516 GTCTCGTCCGGGGGTTGG 62.079 72.222 0.00 0.00 0.00 3.77
4020 8387 1.002659 GGCCGGGCCTTATTTTGTTTT 59.997 47.619 30.86 0.00 46.69 2.43
4021 8388 0.611200 GGCCGGGCCTTATTTTGTTT 59.389 50.000 30.86 0.00 46.69 2.83
4098 8465 3.817647 CTCCCACTTTATTCTATGGCTGC 59.182 47.826 0.00 0.00 0.00 5.25
4101 8468 3.565902 GTGCTCCCACTTTATTCTATGGC 59.434 47.826 0.00 0.00 38.93 4.40
4104 8471 7.170965 CCATATGTGCTCCCACTTTATTCTAT 58.829 38.462 1.24 0.00 42.54 1.98
4108 8475 4.167892 TCCCATATGTGCTCCCACTTTATT 59.832 41.667 1.24 0.00 42.54 1.40
4111 8478 1.922447 TCCCATATGTGCTCCCACTTT 59.078 47.619 1.24 0.00 42.54 2.66
4124 8491 0.848203 CCCTCCCCATGCTCCCATAT 60.848 60.000 0.00 0.00 0.00 1.78
4125 8492 1.464001 CCCTCCCCATGCTCCCATA 60.464 63.158 0.00 0.00 0.00 2.74
4163 8530 3.611674 GTTTGGGTGCGGGGGTTG 61.612 66.667 0.00 0.00 0.00 3.77
4166 8533 3.611674 GTTGTTTGGGTGCGGGGG 61.612 66.667 0.00 0.00 0.00 5.40
4167 8534 2.520741 AGTTGTTTGGGTGCGGGG 60.521 61.111 0.00 0.00 0.00 5.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.