Multiple sequence alignment - TraesCS5D01G060200

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G060200 chr5D 100.000 2266 0 0 1 2266 56921067 56923332 0.000000e+00 4185.0
1 TraesCS5D01G060200 chr5D 100.000 503 0 0 2497 2999 56923563 56924065 0.000000e+00 929.0
2 TraesCS5D01G060200 chr5A 88.169 1682 100 38 590 2249 45281788 45283392 0.000000e+00 1912.0
3 TraesCS5D01G060200 chr5A 87.209 430 55 0 2566 2995 45283399 45283828 9.660000e-135 490.0
4 TraesCS5D01G060200 chr5B 86.396 1676 137 44 615 2263 59791136 59792747 0.000000e+00 1748.0
5 TraesCS5D01G060200 chr6B 87.500 88 11 0 101 188 554136714 554136801 5.290000e-18 102.0
6 TraesCS5D01G060200 chr3A 95.000 60 2 1 2497 2556 467060125 467060067 3.180000e-15 93.5
7 TraesCS5D01G060200 chr7D 80.180 111 20 2 85 194 435450635 435450526 6.890000e-12 82.4
8 TraesCS5D01G060200 chr7A 95.833 48 1 1 2510 2556 681261945 681261992 3.210000e-10 76.8
9 TraesCS5D01G060200 chr2D 79.817 109 17 4 2053 2160 110673732 110673836 1.150000e-09 75.0
10 TraesCS5D01G060200 chr1B 80.851 94 15 2 2054 2147 40699615 40699525 1.490000e-08 71.3
11 TraesCS5D01G060200 chr1B 91.304 46 1 3 2514 2556 491336607 491336652 3.230000e-05 60.2
12 TraesCS5D01G060200 chr1B 100.000 32 0 0 130 161 508977371 508977402 3.230000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G060200 chr5D 56921067 56924065 2998 False 2557 4185 100.000 1 2999 2 chr5D.!!$F1 2998
1 TraesCS5D01G060200 chr5A 45281788 45283828 2040 False 1201 1912 87.689 590 2995 2 chr5A.!!$F1 2405
2 TraesCS5D01G060200 chr5B 59791136 59792747 1611 False 1748 1748 86.396 615 2263 1 chr5B.!!$F1 1648

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
618 625 0.030235 CAGTGAGTGACGACCGTTCA 59.97 55.0 0.0 0.0 0.0 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2546 2597 0.036105 TAGTCTCGTACAGTGGCGGA 60.036 55.0 9.0 3.89 0.0 5.54 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.353357 TCCTTATTGGCAGCTGGATG 57.647 50.000 17.12 0.00 35.26 3.51
21 22 1.133699 TCCTTATTGGCAGCTGGATGG 60.134 52.381 17.12 0.00 35.26 3.51
22 23 1.133699 CCTTATTGGCAGCTGGATGGA 60.134 52.381 17.12 0.00 0.00 3.41
23 24 1.952296 CTTATTGGCAGCTGGATGGAC 59.048 52.381 17.12 0.00 0.00 4.02
24 25 0.179048 TATTGGCAGCTGGATGGACG 60.179 55.000 17.12 0.00 0.00 4.79
25 26 2.898920 ATTGGCAGCTGGATGGACGG 62.899 60.000 17.12 0.00 0.00 4.79
26 27 4.101448 GGCAGCTGGATGGACGGT 62.101 66.667 17.12 0.00 0.00 4.83
27 28 2.821366 GCAGCTGGATGGACGGTG 60.821 66.667 17.12 0.00 0.00 4.94
28 29 2.665000 CAGCTGGATGGACGGTGT 59.335 61.111 5.57 0.00 0.00 4.16
29 30 1.003355 CAGCTGGATGGACGGTGTT 60.003 57.895 5.57 0.00 0.00 3.32
30 31 1.021390 CAGCTGGATGGACGGTGTTC 61.021 60.000 5.57 0.00 0.00 3.18
31 32 1.003839 GCTGGATGGACGGTGTTCA 60.004 57.895 0.00 0.00 0.00 3.18
32 33 1.021390 GCTGGATGGACGGTGTTCAG 61.021 60.000 0.00 0.00 0.00 3.02
33 34 0.391661 CTGGATGGACGGTGTTCAGG 60.392 60.000 0.00 0.00 0.00 3.86
34 35 1.078426 GGATGGACGGTGTTCAGGG 60.078 63.158 0.00 0.00 0.00 4.45
35 36 1.078426 GATGGACGGTGTTCAGGGG 60.078 63.158 0.00 0.00 0.00 4.79
36 37 2.536997 GATGGACGGTGTTCAGGGGG 62.537 65.000 0.00 0.00 0.00 5.40
60 61 3.637273 GCGGTGGAGGGGTCAGTT 61.637 66.667 0.00 0.00 0.00 3.16
61 62 2.663196 CGGTGGAGGGGTCAGTTC 59.337 66.667 0.00 0.00 0.00 3.01
62 63 2.214216 CGGTGGAGGGGTCAGTTCA 61.214 63.158 0.00 0.00 0.00 3.18
63 64 1.553690 CGGTGGAGGGGTCAGTTCAT 61.554 60.000 0.00 0.00 0.00 2.57
64 65 0.035056 GGTGGAGGGGTCAGTTCATG 60.035 60.000 0.00 0.00 0.00 3.07
65 66 0.678048 GTGGAGGGGTCAGTTCATGC 60.678 60.000 0.00 0.00 0.00 4.06
66 67 0.842030 TGGAGGGGTCAGTTCATGCT 60.842 55.000 0.00 0.00 0.00 3.79
67 68 0.107459 GGAGGGGTCAGTTCATGCTC 60.107 60.000 0.00 0.00 0.00 4.26
68 69 0.460987 GAGGGGTCAGTTCATGCTCG 60.461 60.000 0.00 0.00 0.00 5.03
69 70 0.904865 AGGGGTCAGTTCATGCTCGA 60.905 55.000 0.00 0.00 0.00 4.04
70 71 0.460987 GGGGTCAGTTCATGCTCGAG 60.461 60.000 8.45 8.45 0.00 4.04
71 72 0.460987 GGGTCAGTTCATGCTCGAGG 60.461 60.000 15.58 0.00 0.00 4.63
72 73 1.086634 GGTCAGTTCATGCTCGAGGC 61.087 60.000 15.58 7.24 42.22 4.70
73 74 1.086634 GTCAGTTCATGCTCGAGGCC 61.087 60.000 15.58 0.00 40.92 5.19
74 75 1.817099 CAGTTCATGCTCGAGGCCC 60.817 63.158 15.58 0.00 40.92 5.80
75 76 2.268920 GTTCATGCTCGAGGCCCA 59.731 61.111 15.58 3.93 40.92 5.36
76 77 2.109126 GTTCATGCTCGAGGCCCAC 61.109 63.158 15.58 0.00 40.92 4.61
77 78 2.293318 TTCATGCTCGAGGCCCACT 61.293 57.895 15.58 0.00 40.92 4.00
78 79 0.975556 TTCATGCTCGAGGCCCACTA 60.976 55.000 15.58 0.00 40.92 2.74
79 80 1.068753 CATGCTCGAGGCCCACTAG 59.931 63.158 15.58 0.00 40.92 2.57
80 81 2.801631 ATGCTCGAGGCCCACTAGC 61.802 63.158 15.58 14.30 40.92 3.42
81 82 3.461773 GCTCGAGGCCCACTAGCA 61.462 66.667 15.58 0.00 33.38 3.49
82 83 2.811101 CTCGAGGCCCACTAGCAG 59.189 66.667 3.91 0.00 0.00 4.24
83 84 1.754621 CTCGAGGCCCACTAGCAGA 60.755 63.158 3.91 0.00 0.00 4.26
84 85 1.304962 TCGAGGCCCACTAGCAGAA 60.305 57.895 0.00 0.00 0.00 3.02
85 86 1.153549 CGAGGCCCACTAGCAGAAC 60.154 63.158 0.00 0.00 0.00 3.01
86 87 1.608717 CGAGGCCCACTAGCAGAACT 61.609 60.000 0.00 0.00 0.00 3.01
87 88 0.176910 GAGGCCCACTAGCAGAACTC 59.823 60.000 0.00 0.00 0.00 3.01
88 89 1.222113 GGCCCACTAGCAGAACTCC 59.778 63.158 0.00 0.00 0.00 3.85
89 90 1.222113 GCCCACTAGCAGAACTCCC 59.778 63.158 0.00 0.00 0.00 4.30
90 91 1.268283 GCCCACTAGCAGAACTCCCT 61.268 60.000 0.00 0.00 0.00 4.20
91 92 0.539051 CCCACTAGCAGAACTCCCTG 59.461 60.000 0.00 0.00 37.23 4.45
97 98 4.268687 CAGAACTCCCTGCGACAC 57.731 61.111 0.00 0.00 0.00 3.67
98 99 1.374758 CAGAACTCCCTGCGACACC 60.375 63.158 0.00 0.00 0.00 4.16
99 100 2.432628 GAACTCCCTGCGACACCG 60.433 66.667 0.00 0.00 39.16 4.94
109 110 3.382832 CGACACCGCCTCTTCCCT 61.383 66.667 0.00 0.00 0.00 4.20
110 111 2.579738 GACACCGCCTCTTCCCTC 59.420 66.667 0.00 0.00 0.00 4.30
111 112 1.985116 GACACCGCCTCTTCCCTCT 60.985 63.158 0.00 0.00 0.00 3.69
112 113 1.950973 GACACCGCCTCTTCCCTCTC 61.951 65.000 0.00 0.00 0.00 3.20
113 114 1.984570 CACCGCCTCTTCCCTCTCA 60.985 63.158 0.00 0.00 0.00 3.27
114 115 1.002274 ACCGCCTCTTCCCTCTCAT 59.998 57.895 0.00 0.00 0.00 2.90
115 116 1.333636 ACCGCCTCTTCCCTCTCATG 61.334 60.000 0.00 0.00 0.00 3.07
116 117 1.333636 CCGCCTCTTCCCTCTCATGT 61.334 60.000 0.00 0.00 0.00 3.21
117 118 0.539051 CGCCTCTTCCCTCTCATGTT 59.461 55.000 0.00 0.00 0.00 2.71
118 119 1.741732 CGCCTCTTCCCTCTCATGTTG 60.742 57.143 0.00 0.00 0.00 3.33
119 120 2.016096 GCCTCTTCCCTCTCATGTTGC 61.016 57.143 0.00 0.00 0.00 4.17
120 121 1.407989 CCTCTTCCCTCTCATGTTGCC 60.408 57.143 0.00 0.00 0.00 4.52
121 122 1.558756 CTCTTCCCTCTCATGTTGCCT 59.441 52.381 0.00 0.00 0.00 4.75
122 123 1.556911 TCTTCCCTCTCATGTTGCCTC 59.443 52.381 0.00 0.00 0.00 4.70
123 124 0.620556 TTCCCTCTCATGTTGCCTCC 59.379 55.000 0.00 0.00 0.00 4.30
124 125 0.252881 TCCCTCTCATGTTGCCTCCT 60.253 55.000 0.00 0.00 0.00 3.69
125 126 0.622665 CCCTCTCATGTTGCCTCCTT 59.377 55.000 0.00 0.00 0.00 3.36
126 127 1.407989 CCCTCTCATGTTGCCTCCTTC 60.408 57.143 0.00 0.00 0.00 3.46
127 128 1.649664 CTCTCATGTTGCCTCCTTCG 58.350 55.000 0.00 0.00 0.00 3.79
128 129 0.391661 TCTCATGTTGCCTCCTTCGC 60.392 55.000 0.00 0.00 0.00 4.70
129 130 1.372087 CTCATGTTGCCTCCTTCGCC 61.372 60.000 0.00 0.00 0.00 5.54
130 131 2.436646 ATGTTGCCTCCTTCGCCG 60.437 61.111 0.00 0.00 0.00 6.46
131 132 3.976701 ATGTTGCCTCCTTCGCCGG 62.977 63.158 0.00 0.00 0.00 6.13
132 133 4.699522 GTTGCCTCCTTCGCCGGT 62.700 66.667 1.90 0.00 0.00 5.28
133 134 4.388499 TTGCCTCCTTCGCCGGTC 62.388 66.667 1.90 0.00 0.00 4.79
137 138 3.839432 CTCCTTCGCCGGTCCCTC 61.839 72.222 1.90 0.00 0.00 4.30
148 149 3.782443 GTCCCTCCGGGCGATGTT 61.782 66.667 0.00 0.00 43.94 2.71
149 150 3.467226 TCCCTCCGGGCGATGTTC 61.467 66.667 0.00 0.00 43.94 3.18
150 151 3.470888 CCCTCCGGGCGATGTTCT 61.471 66.667 0.00 0.00 35.35 3.01
151 152 2.107141 CCTCCGGGCGATGTTCTC 59.893 66.667 0.00 0.00 0.00 2.87
152 153 2.427245 CCTCCGGGCGATGTTCTCT 61.427 63.158 0.00 0.00 0.00 3.10
153 154 1.227089 CTCCGGGCGATGTTCTCTG 60.227 63.158 0.00 0.00 0.00 3.35
154 155 2.202932 CCGGGCGATGTTCTCTGG 60.203 66.667 0.00 0.00 0.00 3.86
155 156 2.892425 CGGGCGATGTTCTCTGGC 60.892 66.667 0.00 0.00 0.00 4.85
156 157 2.586792 GGGCGATGTTCTCTGGCT 59.413 61.111 0.00 0.00 0.00 4.75
157 158 1.078143 GGGCGATGTTCTCTGGCTT 60.078 57.895 0.00 0.00 0.00 4.35
158 159 1.372087 GGGCGATGTTCTCTGGCTTG 61.372 60.000 0.00 0.00 0.00 4.01
159 160 1.427020 GCGATGTTCTCTGGCTTGC 59.573 57.895 0.00 0.00 0.00 4.01
160 161 1.300971 GCGATGTTCTCTGGCTTGCA 61.301 55.000 0.00 0.00 0.00 4.08
161 162 0.725686 CGATGTTCTCTGGCTTGCAG 59.274 55.000 0.00 0.00 0.00 4.41
162 163 1.093159 GATGTTCTCTGGCTTGCAGG 58.907 55.000 0.00 0.00 0.00 4.85
163 164 0.964358 ATGTTCTCTGGCTTGCAGGC 60.964 55.000 13.24 13.24 41.77 4.85
171 172 2.598394 GCTTGCAGGCCTGAACCA 60.598 61.111 37.21 21.74 0.00 3.67
172 173 2.202395 GCTTGCAGGCCTGAACCAA 61.202 57.895 37.21 26.84 0.00 3.67
173 174 1.962144 CTTGCAGGCCTGAACCAAG 59.038 57.895 37.21 31.02 0.00 3.61
174 175 1.530013 CTTGCAGGCCTGAACCAAGG 61.530 60.000 37.21 18.27 40.63 3.61
175 176 2.005606 TTGCAGGCCTGAACCAAGGA 62.006 55.000 37.21 6.70 40.02 3.36
176 177 1.000396 GCAGGCCTGAACCAAGGAT 60.000 57.895 37.21 0.00 40.02 3.24
177 178 1.318158 GCAGGCCTGAACCAAGGATG 61.318 60.000 37.21 6.37 40.02 3.51
205 206 3.692406 GGGCGAGTCCGAGGTTGT 61.692 66.667 0.00 0.00 38.22 3.32
206 207 2.432628 GGCGAGTCCGAGGTTGTG 60.433 66.667 0.00 0.00 38.22 3.33
207 208 2.338984 GCGAGTCCGAGGTTGTGT 59.661 61.111 0.00 0.00 38.22 3.72
208 209 1.733399 GCGAGTCCGAGGTTGTGTC 60.733 63.158 0.00 0.00 38.22 3.67
209 210 1.080705 CGAGTCCGAGGTTGTGTCC 60.081 63.158 0.00 0.00 38.22 4.02
210 211 1.080705 GAGTCCGAGGTTGTGTCCG 60.081 63.158 0.00 0.00 0.00 4.79
211 212 1.803366 GAGTCCGAGGTTGTGTCCGT 61.803 60.000 0.00 0.00 0.00 4.69
212 213 1.663702 GTCCGAGGTTGTGTCCGTG 60.664 63.158 0.00 0.00 0.00 4.94
213 214 1.829096 TCCGAGGTTGTGTCCGTGA 60.829 57.895 0.00 0.00 0.00 4.35
214 215 1.663702 CCGAGGTTGTGTCCGTGAC 60.664 63.158 0.00 0.00 0.00 3.67
215 216 2.014554 CGAGGTTGTGTCCGTGACG 61.015 63.158 0.00 0.00 34.95 4.35
234 235 2.125269 CGGTTGGGGACGCTTAGG 60.125 66.667 0.00 0.00 0.00 2.69
235 236 2.271173 GGTTGGGGACGCTTAGGG 59.729 66.667 0.00 0.00 0.00 3.53
236 237 2.437895 GTTGGGGACGCTTAGGGC 60.438 66.667 0.00 0.00 37.64 5.19
245 246 2.203209 GCTTAGGGCGGTGGATGG 60.203 66.667 0.00 0.00 0.00 3.51
246 247 2.510906 CTTAGGGCGGTGGATGGG 59.489 66.667 0.00 0.00 0.00 4.00
247 248 3.093835 TTAGGGCGGTGGATGGGG 61.094 66.667 0.00 0.00 0.00 4.96
267 268 4.864334 GGCGGCACAGATGAGGGG 62.864 72.222 3.07 0.00 0.00 4.79
268 269 4.864334 GCGGCACAGATGAGGGGG 62.864 72.222 0.00 0.00 0.00 5.40
269 270 3.083349 CGGCACAGATGAGGGGGA 61.083 66.667 0.00 0.00 0.00 4.81
270 271 2.669133 CGGCACAGATGAGGGGGAA 61.669 63.158 0.00 0.00 0.00 3.97
271 272 1.225704 GGCACAGATGAGGGGGAAG 59.774 63.158 0.00 0.00 0.00 3.46
272 273 1.225704 GCACAGATGAGGGGGAAGG 59.774 63.158 0.00 0.00 0.00 3.46
273 274 1.918253 CACAGATGAGGGGGAAGGG 59.082 63.158 0.00 0.00 0.00 3.95
274 275 0.916358 CACAGATGAGGGGGAAGGGT 60.916 60.000 0.00 0.00 0.00 4.34
275 276 0.916358 ACAGATGAGGGGGAAGGGTG 60.916 60.000 0.00 0.00 0.00 4.61
276 277 1.308216 AGATGAGGGGGAAGGGTGG 60.308 63.158 0.00 0.00 0.00 4.61
277 278 1.307866 GATGAGGGGGAAGGGTGGA 60.308 63.158 0.00 0.00 0.00 4.02
278 279 1.619669 ATGAGGGGGAAGGGTGGAC 60.620 63.158 0.00 0.00 0.00 4.02
279 280 3.400054 GAGGGGGAAGGGTGGACG 61.400 72.222 0.00 0.00 0.00 4.79
280 281 3.918328 GAGGGGGAAGGGTGGACGA 62.918 68.421 0.00 0.00 0.00 4.20
281 282 2.691252 GGGGGAAGGGTGGACGAT 60.691 66.667 0.00 0.00 0.00 3.73
282 283 2.590092 GGGGAAGGGTGGACGATG 59.410 66.667 0.00 0.00 0.00 3.84
283 284 2.298661 GGGGAAGGGTGGACGATGT 61.299 63.158 0.00 0.00 0.00 3.06
284 285 1.078426 GGGAAGGGTGGACGATGTG 60.078 63.158 0.00 0.00 0.00 3.21
285 286 1.550130 GGGAAGGGTGGACGATGTGA 61.550 60.000 0.00 0.00 0.00 3.58
286 287 0.391263 GGAAGGGTGGACGATGTGAC 60.391 60.000 0.00 0.00 0.00 3.67
287 288 0.608640 GAAGGGTGGACGATGTGACT 59.391 55.000 0.00 0.00 0.00 3.41
288 289 0.321671 AAGGGTGGACGATGTGACTG 59.678 55.000 0.00 0.00 0.00 3.51
289 290 1.741770 GGGTGGACGATGTGACTGC 60.742 63.158 0.00 0.00 0.00 4.40
290 291 1.293498 GGTGGACGATGTGACTGCT 59.707 57.895 0.00 0.00 0.00 4.24
291 292 0.737715 GGTGGACGATGTGACTGCTC 60.738 60.000 0.00 0.00 0.00 4.26
292 293 1.073216 GTGGACGATGTGACTGCTCG 61.073 60.000 0.00 2.27 38.34 5.03
293 294 1.517257 GGACGATGTGACTGCTCGG 60.517 63.158 0.00 0.00 36.74 4.63
294 295 1.506718 GACGATGTGACTGCTCGGA 59.493 57.895 0.00 0.00 36.74 4.55
295 296 0.101399 GACGATGTGACTGCTCGGAT 59.899 55.000 0.00 0.00 36.74 4.18
296 297 0.179127 ACGATGTGACTGCTCGGATG 60.179 55.000 0.00 0.00 36.74 3.51
297 298 1.485838 CGATGTGACTGCTCGGATGC 61.486 60.000 0.00 0.00 0.00 3.91
298 299 0.460811 GATGTGACTGCTCGGATGCA 60.461 55.000 0.00 0.00 41.05 3.96
306 307 1.097232 TGCTCGGATGCAGAAAATGG 58.903 50.000 0.00 0.00 38.12 3.16
307 308 1.098050 GCTCGGATGCAGAAAATGGT 58.902 50.000 0.00 0.00 0.00 3.55
308 309 1.202222 GCTCGGATGCAGAAAATGGTG 60.202 52.381 0.00 0.00 0.00 4.17
309 310 1.402968 CTCGGATGCAGAAAATGGTGG 59.597 52.381 0.00 0.00 0.00 4.61
310 311 1.004161 TCGGATGCAGAAAATGGTGGA 59.996 47.619 0.00 0.00 0.00 4.02
311 312 1.133025 CGGATGCAGAAAATGGTGGAC 59.867 52.381 0.00 0.00 0.00 4.02
312 313 1.133025 GGATGCAGAAAATGGTGGACG 59.867 52.381 0.00 0.00 0.00 4.79
313 314 2.083774 GATGCAGAAAATGGTGGACGA 58.916 47.619 0.00 0.00 0.00 4.20
314 315 1.974265 TGCAGAAAATGGTGGACGAA 58.026 45.000 0.00 0.00 0.00 3.85
315 316 1.606668 TGCAGAAAATGGTGGACGAAC 59.393 47.619 0.00 0.00 0.00 3.95
316 317 1.399727 GCAGAAAATGGTGGACGAACG 60.400 52.381 0.00 0.00 0.00 3.95
317 318 1.871039 CAGAAAATGGTGGACGAACGT 59.129 47.619 0.00 0.00 0.00 3.99
318 319 1.871039 AGAAAATGGTGGACGAACGTG 59.129 47.619 4.19 0.00 0.00 4.49
319 320 0.948678 AAAATGGTGGACGAACGTGG 59.051 50.000 4.19 0.00 0.00 4.94
320 321 0.107081 AAATGGTGGACGAACGTGGA 59.893 50.000 4.19 0.00 0.00 4.02
321 322 0.107081 AATGGTGGACGAACGTGGAA 59.893 50.000 4.19 0.00 0.00 3.53
322 323 0.320421 ATGGTGGACGAACGTGGAAG 60.320 55.000 4.19 0.00 0.00 3.46
323 324 1.666872 GGTGGACGAACGTGGAAGG 60.667 63.158 4.19 0.00 0.00 3.46
324 325 1.364901 GTGGACGAACGTGGAAGGA 59.635 57.895 4.19 0.00 0.00 3.36
325 326 0.249573 GTGGACGAACGTGGAAGGAA 60.250 55.000 4.19 0.00 0.00 3.36
326 327 0.032952 TGGACGAACGTGGAAGGAAG 59.967 55.000 4.19 0.00 0.00 3.46
327 328 0.669625 GGACGAACGTGGAAGGAAGG 60.670 60.000 4.19 0.00 0.00 3.46
328 329 1.289800 GACGAACGTGGAAGGAAGGC 61.290 60.000 4.19 0.00 0.00 4.35
329 330 2.380410 CGAACGTGGAAGGAAGGCG 61.380 63.158 0.00 0.00 0.00 5.52
330 331 1.005394 GAACGTGGAAGGAAGGCGA 60.005 57.895 0.00 0.00 0.00 5.54
331 332 0.391263 GAACGTGGAAGGAAGGCGAT 60.391 55.000 0.00 0.00 0.00 4.58
332 333 0.673644 AACGTGGAAGGAAGGCGATG 60.674 55.000 0.00 0.00 0.00 3.84
333 334 1.218047 CGTGGAAGGAAGGCGATGA 59.782 57.895 0.00 0.00 0.00 2.92
334 335 0.807667 CGTGGAAGGAAGGCGATGAG 60.808 60.000 0.00 0.00 0.00 2.90
335 336 0.250513 GTGGAAGGAAGGCGATGAGT 59.749 55.000 0.00 0.00 0.00 3.41
336 337 0.984230 TGGAAGGAAGGCGATGAGTT 59.016 50.000 0.00 0.00 0.00 3.01
337 338 1.351017 TGGAAGGAAGGCGATGAGTTT 59.649 47.619 0.00 0.00 0.00 2.66
338 339 1.740025 GGAAGGAAGGCGATGAGTTTG 59.260 52.381 0.00 0.00 0.00 2.93
339 340 2.615493 GGAAGGAAGGCGATGAGTTTGA 60.615 50.000 0.00 0.00 0.00 2.69
340 341 2.100605 AGGAAGGCGATGAGTTTGAC 57.899 50.000 0.00 0.00 0.00 3.18
341 342 0.721718 GGAAGGCGATGAGTTTGACG 59.278 55.000 0.00 0.00 0.00 4.35
342 343 0.721718 GAAGGCGATGAGTTTGACGG 59.278 55.000 0.00 0.00 0.00 4.79
343 344 0.320374 AAGGCGATGAGTTTGACGGA 59.680 50.000 0.00 0.00 0.00 4.69
344 345 0.389948 AGGCGATGAGTTTGACGGAC 60.390 55.000 0.00 0.00 0.00 4.79
345 346 0.389948 GGCGATGAGTTTGACGGACT 60.390 55.000 0.00 0.00 0.00 3.85
346 347 1.135199 GGCGATGAGTTTGACGGACTA 60.135 52.381 0.00 0.00 0.00 2.59
347 348 2.186076 GCGATGAGTTTGACGGACTAG 58.814 52.381 0.00 0.00 0.00 2.57
348 349 2.798680 CGATGAGTTTGACGGACTAGG 58.201 52.381 0.00 0.00 0.00 3.02
349 350 2.541556 GATGAGTTTGACGGACTAGGC 58.458 52.381 0.00 0.00 0.00 3.93
350 351 0.606604 TGAGTTTGACGGACTAGGCC 59.393 55.000 3.74 3.74 0.00 5.19
351 352 0.606604 GAGTTTGACGGACTAGGCCA 59.393 55.000 16.92 0.00 0.00 5.36
352 353 1.207329 GAGTTTGACGGACTAGGCCAT 59.793 52.381 16.92 0.00 0.00 4.40
353 354 1.628846 AGTTTGACGGACTAGGCCATT 59.371 47.619 16.92 0.00 0.00 3.16
354 355 2.039879 AGTTTGACGGACTAGGCCATTT 59.960 45.455 16.92 0.00 0.00 2.32
355 356 2.817844 GTTTGACGGACTAGGCCATTTT 59.182 45.455 16.92 0.00 0.00 1.82
356 357 2.107950 TGACGGACTAGGCCATTTTG 57.892 50.000 16.92 0.00 0.00 2.44
357 358 1.339631 TGACGGACTAGGCCATTTTGG 60.340 52.381 16.92 0.00 41.55 3.28
358 359 0.696501 ACGGACTAGGCCATTTTGGT 59.303 50.000 16.92 0.00 40.46 3.67
359 360 1.094785 CGGACTAGGCCATTTTGGTG 58.905 55.000 16.92 0.00 40.46 4.17
360 361 1.613255 CGGACTAGGCCATTTTGGTGT 60.613 52.381 16.92 0.00 40.46 4.16
361 362 2.355310 CGGACTAGGCCATTTTGGTGTA 60.355 50.000 16.92 0.00 40.46 2.90
362 363 3.692690 GGACTAGGCCATTTTGGTGTAA 58.307 45.455 10.77 0.00 40.46 2.41
363 364 4.278310 GGACTAGGCCATTTTGGTGTAAT 58.722 43.478 10.77 0.00 40.46 1.89
364 365 4.709886 GGACTAGGCCATTTTGGTGTAATT 59.290 41.667 10.77 0.00 40.46 1.40
365 366 5.394115 GGACTAGGCCATTTTGGTGTAATTG 60.394 44.000 10.77 0.00 40.46 2.32
366 367 3.979101 AGGCCATTTTGGTGTAATTGG 57.021 42.857 5.01 0.00 40.46 3.16
367 368 2.571202 AGGCCATTTTGGTGTAATTGGG 59.429 45.455 5.01 0.00 40.46 4.12
368 369 2.569404 GGCCATTTTGGTGTAATTGGGA 59.431 45.455 0.00 0.00 40.46 4.37
369 370 3.199727 GGCCATTTTGGTGTAATTGGGAT 59.800 43.478 0.00 0.00 40.46 3.85
370 371 4.407296 GGCCATTTTGGTGTAATTGGGATA 59.593 41.667 0.00 0.00 40.46 2.59
371 372 5.453198 GGCCATTTTGGTGTAATTGGGATAG 60.453 44.000 0.00 0.00 40.46 2.08
372 373 5.453198 GCCATTTTGGTGTAATTGGGATAGG 60.453 44.000 0.00 0.00 40.46 2.57
373 374 5.070313 CCATTTTGGTGTAATTGGGATAGGG 59.930 44.000 0.00 0.00 31.35 3.53
374 375 4.957606 TTTGGTGTAATTGGGATAGGGT 57.042 40.909 0.00 0.00 0.00 4.34
375 376 4.513406 TTGGTGTAATTGGGATAGGGTC 57.487 45.455 0.00 0.00 0.00 4.46
387 388 4.073293 GGATAGGGTCCACATGTGTTAG 57.927 50.000 23.79 9.50 46.96 2.34
388 389 3.709653 GGATAGGGTCCACATGTGTTAGA 59.290 47.826 23.79 11.73 46.96 2.10
389 390 4.348168 GGATAGGGTCCACATGTGTTAGAT 59.652 45.833 23.79 9.52 46.96 1.98
390 391 3.634397 AGGGTCCACATGTGTTAGATG 57.366 47.619 23.79 8.05 0.00 2.90
391 392 2.912956 AGGGTCCACATGTGTTAGATGT 59.087 45.455 23.79 0.21 34.24 3.06
392 393 3.009723 GGGTCCACATGTGTTAGATGTG 58.990 50.000 23.79 10.97 46.92 3.21
397 398 3.673902 CACATGTGTTAGATGTGGTGGA 58.326 45.455 18.03 0.00 44.68 4.02
398 399 3.436704 CACATGTGTTAGATGTGGTGGAC 59.563 47.826 18.03 0.00 44.68 4.02
399 400 2.448926 TGTGTTAGATGTGGTGGACG 57.551 50.000 0.00 0.00 0.00 4.79
400 401 1.076332 GTGTTAGATGTGGTGGACGC 58.924 55.000 0.00 0.00 0.00 5.19
401 402 0.389296 TGTTAGATGTGGTGGACGCG 60.389 55.000 3.53 3.53 0.00 6.01
402 403 0.108992 GTTAGATGTGGTGGACGCGA 60.109 55.000 15.93 0.00 0.00 5.87
403 404 0.108992 TTAGATGTGGTGGACGCGAC 60.109 55.000 15.93 6.56 0.00 5.19
404 405 0.963856 TAGATGTGGTGGACGCGACT 60.964 55.000 15.93 0.00 0.00 4.18
405 406 0.963856 AGATGTGGTGGACGCGACTA 60.964 55.000 15.93 0.00 0.00 2.59
406 407 0.525668 GATGTGGTGGACGCGACTAG 60.526 60.000 15.93 0.00 0.00 2.57
407 408 0.963856 ATGTGGTGGACGCGACTAGA 60.964 55.000 15.93 0.00 0.00 2.43
408 409 1.174078 TGTGGTGGACGCGACTAGAA 61.174 55.000 15.93 0.00 0.00 2.10
409 410 0.456312 GTGGTGGACGCGACTAGAAG 60.456 60.000 15.93 0.00 0.00 2.85
410 411 0.892358 TGGTGGACGCGACTAGAAGT 60.892 55.000 15.93 0.00 0.00 3.01
411 412 0.179169 GGTGGACGCGACTAGAAGTC 60.179 60.000 15.93 0.00 41.71 3.01
413 414 1.432657 GGACGCGACTAGAAGTCCC 59.567 63.158 15.93 0.00 45.39 4.46
414 415 1.432657 GACGCGACTAGAAGTCCCC 59.567 63.158 15.93 0.00 42.12 4.81
415 416 1.303888 ACGCGACTAGAAGTCCCCA 60.304 57.895 15.93 0.00 42.12 4.96
416 417 0.683504 ACGCGACTAGAAGTCCCCAT 60.684 55.000 15.93 0.00 42.12 4.00
417 418 1.315690 CGCGACTAGAAGTCCCCATA 58.684 55.000 0.00 0.00 42.12 2.74
418 419 1.001597 CGCGACTAGAAGTCCCCATAC 60.002 57.143 0.00 0.00 42.12 2.39
419 420 1.340568 GCGACTAGAAGTCCCCATACC 59.659 57.143 0.00 0.00 42.12 2.73
420 421 1.962100 CGACTAGAAGTCCCCATACCC 59.038 57.143 0.00 0.00 42.12 3.69
421 422 1.962100 GACTAGAAGTCCCCATACCCG 59.038 57.143 0.00 0.00 39.28 5.28
422 423 0.680061 CTAGAAGTCCCCATACCCGC 59.320 60.000 0.00 0.00 0.00 6.13
423 424 0.761702 TAGAAGTCCCCATACCCGCC 60.762 60.000 0.00 0.00 0.00 6.13
424 425 3.094498 AAGTCCCCATACCCGCCC 61.094 66.667 0.00 0.00 0.00 6.13
425 426 3.954740 AAGTCCCCATACCCGCCCA 62.955 63.158 0.00 0.00 0.00 5.36
426 427 3.413300 GTCCCCATACCCGCCCAA 61.413 66.667 0.00 0.00 0.00 4.12
427 428 2.614331 TCCCCATACCCGCCCAAA 60.614 61.111 0.00 0.00 0.00 3.28
428 429 2.009882 TCCCCATACCCGCCCAAAT 61.010 57.895 0.00 0.00 0.00 2.32
429 430 1.075600 CCCCATACCCGCCCAAATT 60.076 57.895 0.00 0.00 0.00 1.82
430 431 0.689412 CCCCATACCCGCCCAAATTT 60.689 55.000 0.00 0.00 0.00 1.82
431 432 1.411787 CCCCATACCCGCCCAAATTTA 60.412 52.381 0.00 0.00 0.00 1.40
432 433 1.684450 CCCATACCCGCCCAAATTTAC 59.316 52.381 0.00 0.00 0.00 2.01
433 434 1.335496 CCATACCCGCCCAAATTTACG 59.665 52.381 0.00 0.00 0.00 3.18
434 435 1.026584 ATACCCGCCCAAATTTACGC 58.973 50.000 0.00 0.00 0.00 4.42
435 436 1.031029 TACCCGCCCAAATTTACGCC 61.031 55.000 0.00 0.00 0.00 5.68
436 437 2.101380 CCGCCCAAATTTACGCCG 59.899 61.111 0.00 0.00 0.00 6.46
437 438 2.101380 CGCCCAAATTTACGCCGG 59.899 61.111 0.00 0.00 0.00 6.13
438 439 2.400158 CGCCCAAATTTACGCCGGA 61.400 57.895 5.05 0.00 0.00 5.14
439 440 1.720694 CGCCCAAATTTACGCCGGAT 61.721 55.000 5.05 0.00 0.00 4.18
440 441 1.310904 GCCCAAATTTACGCCGGATA 58.689 50.000 5.05 0.00 0.00 2.59
441 442 1.883926 GCCCAAATTTACGCCGGATAT 59.116 47.619 5.05 0.00 0.00 1.63
442 443 2.351350 GCCCAAATTTACGCCGGATATG 60.351 50.000 5.05 0.00 0.00 1.78
443 444 3.142951 CCCAAATTTACGCCGGATATGA 58.857 45.455 5.05 0.00 0.00 2.15
444 445 3.188460 CCCAAATTTACGCCGGATATGAG 59.812 47.826 5.05 0.00 0.00 2.90
445 446 3.813166 CCAAATTTACGCCGGATATGAGT 59.187 43.478 5.05 0.00 0.00 3.41
446 447 4.274950 CCAAATTTACGCCGGATATGAGTT 59.725 41.667 5.05 0.00 0.00 3.01
447 448 5.204833 CAAATTTACGCCGGATATGAGTTG 58.795 41.667 5.05 0.00 0.00 3.16
448 449 3.530265 TTTACGCCGGATATGAGTTGT 57.470 42.857 5.05 0.00 0.00 3.32
449 450 2.502213 TACGCCGGATATGAGTTGTG 57.498 50.000 5.05 0.00 0.00 3.33
450 451 0.179084 ACGCCGGATATGAGTTGTGG 60.179 55.000 5.05 0.00 0.00 4.17
451 452 1.498865 CGCCGGATATGAGTTGTGGC 61.499 60.000 5.05 0.00 37.66 5.01
452 453 0.179045 GCCGGATATGAGTTGTGGCT 60.179 55.000 5.05 0.00 38.00 4.75
453 454 1.586422 CCGGATATGAGTTGTGGCTG 58.414 55.000 0.00 0.00 0.00 4.85
454 455 1.138859 CCGGATATGAGTTGTGGCTGA 59.861 52.381 0.00 0.00 0.00 4.26
455 456 2.477825 CGGATATGAGTTGTGGCTGAG 58.522 52.381 0.00 0.00 0.00 3.35
456 457 2.216898 GGATATGAGTTGTGGCTGAGC 58.783 52.381 0.00 0.00 0.00 4.26
457 458 2.158842 GGATATGAGTTGTGGCTGAGCT 60.159 50.000 3.72 0.00 0.00 4.09
458 459 3.070159 GGATATGAGTTGTGGCTGAGCTA 59.930 47.826 3.72 0.00 0.00 3.32
459 460 4.262808 GGATATGAGTTGTGGCTGAGCTAT 60.263 45.833 3.72 0.00 0.00 2.97
460 461 5.047021 GGATATGAGTTGTGGCTGAGCTATA 60.047 44.000 3.72 0.00 0.00 1.31
461 462 3.808466 TGAGTTGTGGCTGAGCTATAG 57.192 47.619 3.72 0.00 0.00 1.31
462 463 3.099905 TGAGTTGTGGCTGAGCTATAGT 58.900 45.455 3.72 0.00 0.00 2.12
463 464 3.131223 TGAGTTGTGGCTGAGCTATAGTC 59.869 47.826 3.72 4.24 0.00 2.59
464 465 3.099905 AGTTGTGGCTGAGCTATAGTCA 58.900 45.455 3.72 0.90 0.00 3.41
465 466 3.708631 AGTTGTGGCTGAGCTATAGTCAT 59.291 43.478 3.72 0.00 31.69 3.06
466 467 4.163078 AGTTGTGGCTGAGCTATAGTCATT 59.837 41.667 3.72 0.00 31.69 2.57
467 468 4.760530 TGTGGCTGAGCTATAGTCATTT 57.239 40.909 3.72 0.00 31.69 2.32
468 469 5.869649 TGTGGCTGAGCTATAGTCATTTA 57.130 39.130 3.72 0.00 31.69 1.40
469 470 6.425210 TGTGGCTGAGCTATAGTCATTTAT 57.575 37.500 3.72 0.00 31.69 1.40
470 471 6.459066 TGTGGCTGAGCTATAGTCATTTATC 58.541 40.000 3.72 0.00 31.69 1.75
471 472 6.268617 TGTGGCTGAGCTATAGTCATTTATCT 59.731 38.462 3.72 0.00 31.69 1.98
472 473 6.589523 GTGGCTGAGCTATAGTCATTTATCTG 59.410 42.308 3.72 0.00 31.69 2.90
473 474 6.105333 GGCTGAGCTATAGTCATTTATCTGG 58.895 44.000 3.72 0.00 0.00 3.86
474 475 6.105333 GCTGAGCTATAGTCATTTATCTGGG 58.895 44.000 0.00 0.00 0.00 4.45
475 476 6.295575 GCTGAGCTATAGTCATTTATCTGGGT 60.296 42.308 0.00 0.00 0.00 4.51
476 477 6.997655 TGAGCTATAGTCATTTATCTGGGTG 58.002 40.000 0.84 0.00 0.00 4.61
477 478 6.014242 TGAGCTATAGTCATTTATCTGGGTGG 60.014 42.308 0.84 0.00 0.00 4.61
478 479 5.249393 AGCTATAGTCATTTATCTGGGTGGG 59.751 44.000 0.84 0.00 0.00 4.61
479 480 2.736670 AGTCATTTATCTGGGTGGGC 57.263 50.000 0.00 0.00 0.00 5.36
480 481 1.215423 AGTCATTTATCTGGGTGGGCC 59.785 52.381 0.00 0.00 0.00 5.80
481 482 1.064017 GTCATTTATCTGGGTGGGCCA 60.064 52.381 0.00 0.00 36.17 5.36
482 483 1.643286 TCATTTATCTGGGTGGGCCAA 59.357 47.619 8.40 0.00 36.17 4.52
483 484 2.043664 TCATTTATCTGGGTGGGCCAAA 59.956 45.455 8.40 0.00 36.17 3.28
484 485 2.704190 TTTATCTGGGTGGGCCAAAA 57.296 45.000 8.40 0.00 36.17 2.44
485 486 1.931635 TTATCTGGGTGGGCCAAAAC 58.068 50.000 8.40 1.39 36.17 2.43
486 487 0.780637 TATCTGGGTGGGCCAAAACA 59.219 50.000 8.40 6.86 36.17 2.83
487 488 0.105246 ATCTGGGTGGGCCAAAACAA 60.105 50.000 8.40 0.00 36.17 2.83
488 489 0.325671 TCTGGGTGGGCCAAAACAAA 60.326 50.000 8.40 0.00 36.17 2.83
489 490 0.543749 CTGGGTGGGCCAAAACAAAA 59.456 50.000 8.40 0.00 36.17 2.44
490 491 0.991920 TGGGTGGGCCAAAACAAAAA 59.008 45.000 8.40 0.00 36.17 1.94
491 492 1.566231 TGGGTGGGCCAAAACAAAAAT 59.434 42.857 8.40 0.00 36.17 1.82
492 493 2.226330 GGGTGGGCCAAAACAAAAATC 58.774 47.619 8.40 0.00 36.17 2.17
493 494 2.158682 GGGTGGGCCAAAACAAAAATCT 60.159 45.455 8.40 0.00 36.17 2.40
494 495 3.550820 GGTGGGCCAAAACAAAAATCTT 58.449 40.909 8.40 0.00 34.09 2.40
495 496 3.314913 GGTGGGCCAAAACAAAAATCTTG 59.685 43.478 8.40 0.00 34.09 3.02
496 497 3.944650 GTGGGCCAAAACAAAAATCTTGT 59.055 39.130 8.40 0.00 0.00 3.16
497 498 3.944015 TGGGCCAAAACAAAAATCTTGTG 59.056 39.130 2.13 0.00 32.22 3.33
498 499 3.243035 GGGCCAAAACAAAAATCTTGTGC 60.243 43.478 4.39 0.00 32.22 4.57
499 500 3.376546 GGCCAAAACAAAAATCTTGTGCA 59.623 39.130 0.00 0.00 32.22 4.57
500 501 4.496175 GGCCAAAACAAAAATCTTGTGCAG 60.496 41.667 0.00 0.00 32.22 4.41
501 502 4.590226 CCAAAACAAAAATCTTGTGCAGC 58.410 39.130 0.00 0.00 32.22 5.25
502 503 4.333372 CCAAAACAAAAATCTTGTGCAGCT 59.667 37.500 0.00 0.00 32.22 4.24
503 504 5.260140 CAAAACAAAAATCTTGTGCAGCTG 58.740 37.500 10.11 10.11 32.22 4.24
504 505 3.102052 ACAAAAATCTTGTGCAGCTGG 57.898 42.857 17.12 0.00 0.00 4.85
505 506 2.224113 ACAAAAATCTTGTGCAGCTGGG 60.224 45.455 17.12 0.00 0.00 4.45
506 507 0.319405 AAAATCTTGTGCAGCTGGGC 59.681 50.000 17.12 1.74 0.00 5.36
507 508 1.538687 AAATCTTGTGCAGCTGGGCC 61.539 55.000 17.12 0.00 0.00 5.80
508 509 2.436596 AATCTTGTGCAGCTGGGCCT 62.437 55.000 17.12 0.00 0.00 5.19
509 510 3.371063 CTTGTGCAGCTGGGCCTG 61.371 66.667 17.12 5.32 35.93 4.85
510 511 4.980702 TTGTGCAGCTGGGCCTGG 62.981 66.667 17.12 2.60 33.44 4.45
547 548 3.139565 GGCCTAGCCCTAACTCCG 58.860 66.667 0.00 0.00 44.06 4.63
548 549 2.422165 GCCTAGCCCTAACTCCGC 59.578 66.667 0.00 0.00 0.00 5.54
549 550 3.139565 CCTAGCCCTAACTCCGCC 58.860 66.667 0.00 0.00 0.00 6.13
550 551 1.760875 CCTAGCCCTAACTCCGCCA 60.761 63.158 0.00 0.00 0.00 5.69
551 552 1.442148 CTAGCCCTAACTCCGCCAC 59.558 63.158 0.00 0.00 0.00 5.01
552 553 1.001248 TAGCCCTAACTCCGCCACT 59.999 57.895 0.00 0.00 0.00 4.00
553 554 1.327690 TAGCCCTAACTCCGCCACTG 61.328 60.000 0.00 0.00 0.00 3.66
554 555 2.584608 CCCTAACTCCGCCACTGG 59.415 66.667 0.00 0.00 0.00 4.00
555 556 1.987855 CCCTAACTCCGCCACTGGA 60.988 63.158 0.00 0.00 36.37 3.86
556 557 1.338136 CCCTAACTCCGCCACTGGAT 61.338 60.000 0.00 0.00 37.41 3.41
557 558 0.105039 CCTAACTCCGCCACTGGATC 59.895 60.000 0.00 0.00 37.41 3.36
558 559 1.115467 CTAACTCCGCCACTGGATCT 58.885 55.000 0.00 0.00 37.41 2.75
559 560 1.482593 CTAACTCCGCCACTGGATCTT 59.517 52.381 0.00 0.00 37.41 2.40
560 561 0.693049 AACTCCGCCACTGGATCTTT 59.307 50.000 0.00 0.00 37.41 2.52
561 562 1.568504 ACTCCGCCACTGGATCTTTA 58.431 50.000 0.00 0.00 37.41 1.85
562 563 1.482593 ACTCCGCCACTGGATCTTTAG 59.517 52.381 0.00 0.00 37.41 1.85
563 564 0.830648 TCCGCCACTGGATCTTTAGG 59.169 55.000 0.00 0.00 31.53 2.69
564 565 0.541863 CCGCCACTGGATCTTTAGGT 59.458 55.000 0.00 0.00 0.00 3.08
565 566 1.473434 CCGCCACTGGATCTTTAGGTC 60.473 57.143 0.00 0.00 0.00 3.85
566 567 1.802880 CGCCACTGGATCTTTAGGTCG 60.803 57.143 0.00 0.00 0.00 4.79
567 568 1.473434 GCCACTGGATCTTTAGGTCGG 60.473 57.143 0.00 0.00 0.00 4.79
568 569 1.831736 CCACTGGATCTTTAGGTCGGT 59.168 52.381 0.00 0.00 0.00 4.69
569 570 3.028850 CCACTGGATCTTTAGGTCGGTA 58.971 50.000 0.00 0.00 0.00 4.02
570 571 3.641906 CCACTGGATCTTTAGGTCGGTAT 59.358 47.826 0.00 0.00 0.00 2.73
571 572 4.501571 CCACTGGATCTTTAGGTCGGTATG 60.502 50.000 0.00 0.00 0.00 2.39
572 573 4.341235 CACTGGATCTTTAGGTCGGTATGA 59.659 45.833 0.00 0.00 0.00 2.15
573 574 4.585162 ACTGGATCTTTAGGTCGGTATGAG 59.415 45.833 0.00 0.00 0.00 2.90
574 575 3.895656 TGGATCTTTAGGTCGGTATGAGG 59.104 47.826 0.00 0.00 0.00 3.86
575 576 4.150359 GGATCTTTAGGTCGGTATGAGGA 58.850 47.826 0.00 0.00 0.00 3.71
576 577 4.218852 GGATCTTTAGGTCGGTATGAGGAG 59.781 50.000 0.00 0.00 0.00 3.69
577 578 2.957006 TCTTTAGGTCGGTATGAGGAGC 59.043 50.000 0.00 0.00 0.00 4.70
578 579 1.700955 TTAGGTCGGTATGAGGAGCC 58.299 55.000 0.00 0.00 0.00 4.70
579 580 0.851469 TAGGTCGGTATGAGGAGCCT 59.149 55.000 0.00 0.00 0.00 4.58
580 581 0.468400 AGGTCGGTATGAGGAGCCTC 60.468 60.000 9.61 9.61 43.01 4.70
581 582 0.468400 GGTCGGTATGAGGAGCCTCT 60.468 60.000 16.87 6.02 43.12 3.69
582 583 0.955905 GTCGGTATGAGGAGCCTCTC 59.044 60.000 16.87 7.90 43.12 3.20
583 584 0.847373 TCGGTATGAGGAGCCTCTCT 59.153 55.000 16.87 7.56 43.12 3.10
584 585 0.958091 CGGTATGAGGAGCCTCTCTG 59.042 60.000 16.87 9.00 43.12 3.35
585 586 1.752436 CGGTATGAGGAGCCTCTCTGT 60.752 57.143 16.87 4.34 43.12 3.41
586 587 1.686052 GGTATGAGGAGCCTCTCTGTG 59.314 57.143 16.87 0.00 43.12 3.66
587 588 2.383855 GTATGAGGAGCCTCTCTGTGT 58.616 52.381 16.87 0.70 43.12 3.72
588 589 1.484038 ATGAGGAGCCTCTCTGTGTC 58.516 55.000 16.87 0.00 43.12 3.67
615 622 1.817357 TATCAGTGAGTGACGACCGT 58.183 50.000 0.00 0.00 38.28 4.83
616 623 0.959553 ATCAGTGAGTGACGACCGTT 59.040 50.000 0.00 0.00 38.28 4.44
618 625 0.030235 CAGTGAGTGACGACCGTTCA 59.970 55.000 0.00 0.00 0.00 3.18
743 752 2.104281 CACTGCATGGATGGATGAGAGA 59.896 50.000 0.00 0.00 0.00 3.10
812 821 7.176165 CACATCATCCAGCATATCCATAACTTT 59.824 37.037 0.00 0.00 0.00 2.66
930 942 2.489329 GCCACTGCAAGCAAGAAAGATA 59.511 45.455 0.00 0.00 37.60 1.98
958 970 3.474570 CGCAAGGAGGGAGGGAGG 61.475 72.222 0.00 0.00 0.00 4.30
996 1009 0.745845 GCAGACCCCAGCACACATAG 60.746 60.000 0.00 0.00 0.00 2.23
1004 1017 1.147473 CAGCACACATAGACACGCAA 58.853 50.000 0.00 0.00 0.00 4.85
1006 1019 0.443869 GCACACATAGACACGCAAGG 59.556 55.000 0.00 0.00 46.39 3.61
1027 1040 4.731313 GGGGGAGGTCTGAATTGATAAT 57.269 45.455 0.00 0.00 0.00 1.28
1028 1041 5.843019 GGGGGAGGTCTGAATTGATAATA 57.157 43.478 0.00 0.00 0.00 0.98
1029 1042 5.810095 GGGGGAGGTCTGAATTGATAATAG 58.190 45.833 0.00 0.00 0.00 1.73
1030 1043 5.249420 GGGGAGGTCTGAATTGATAATAGC 58.751 45.833 0.00 0.00 0.00 2.97
1083 1097 3.855858 TGCGAATCTGTATGTGTGCTAA 58.144 40.909 0.00 0.00 0.00 3.09
1084 1098 4.441792 TGCGAATCTGTATGTGTGCTAAT 58.558 39.130 0.00 0.00 0.00 1.73
1085 1099 4.507756 TGCGAATCTGTATGTGTGCTAATC 59.492 41.667 0.00 0.00 0.00 1.75
1086 1100 4.747108 GCGAATCTGTATGTGTGCTAATCT 59.253 41.667 0.00 0.00 0.00 2.40
1087 1101 5.332883 GCGAATCTGTATGTGTGCTAATCTG 60.333 44.000 0.00 0.00 0.00 2.90
1149 1163 1.202651 ACAAGGTCGGTCTGTTTCTGG 60.203 52.381 0.00 0.00 0.00 3.86
1180 1194 4.655762 TGTGATCTTCTAATGACGGAGG 57.344 45.455 0.00 0.00 0.00 4.30
1228 1242 1.021968 CAAGCTGCAGCATAGCATCA 58.978 50.000 38.24 0.00 44.68 3.07
1229 1243 1.404035 CAAGCTGCAGCATAGCATCAA 59.596 47.619 38.24 0.00 44.68 2.57
1298 1312 2.996395 CAGCATCTGCCTGGAGGT 59.004 61.111 0.00 0.00 43.38 3.85
1528 1542 4.664677 GCGTCTGTCAGGTGCCGT 62.665 66.667 0.00 0.00 0.00 5.68
1583 1600 4.452733 CCTTCACGGGCCGGACTC 62.453 72.222 31.78 0.00 0.00 3.36
1612 1629 2.426381 GGCGGCAACTTCTACTACTACT 59.574 50.000 3.07 0.00 0.00 2.57
1614 1631 4.497173 GGCGGCAACTTCTACTACTACTAC 60.497 50.000 3.07 0.00 0.00 2.73
1615 1632 4.784710 GCGGCAACTTCTACTACTACTACG 60.785 50.000 0.00 0.00 0.00 3.51
1617 1634 5.501574 CGGCAACTTCTACTACTACTACGAC 60.502 48.000 0.00 0.00 0.00 4.34
1619 1636 6.128172 GGCAACTTCTACTACTACTACGACAA 60.128 42.308 0.00 0.00 0.00 3.18
1620 1637 6.740453 GCAACTTCTACTACTACTACGACAAC 59.260 42.308 0.00 0.00 0.00 3.32
1621 1638 6.639671 ACTTCTACTACTACTACGACAACG 57.360 41.667 0.00 0.00 45.75 4.10
1848 1868 1.448717 GGCGTTCCTCTGCTTCCTC 60.449 63.158 0.00 0.00 0.00 3.71
1880 1900 2.220133 GCTCTGCAGAAAACGACGTAAA 59.780 45.455 18.85 0.00 0.00 2.01
1914 1937 1.067199 GCAGGAGCGTTGCATTTTCG 61.067 55.000 5.44 0.00 41.17 3.46
1987 2033 2.485657 GCCGGAAAACCCCAATGAAAAA 60.486 45.455 5.05 0.00 0.00 1.94
1988 2034 3.135225 CCGGAAAACCCCAATGAAAAAC 58.865 45.455 0.00 0.00 0.00 2.43
1990 2036 4.192317 CGGAAAACCCCAATGAAAAACAA 58.808 39.130 0.00 0.00 0.00 2.83
1992 2038 4.336993 GGAAAACCCCAATGAAAAACAACC 59.663 41.667 0.00 0.00 0.00 3.77
1993 2039 2.900716 ACCCCAATGAAAAACAACCG 57.099 45.000 0.00 0.00 0.00 4.44
1995 2041 1.202580 CCCCAATGAAAAACAACCGCA 60.203 47.619 0.00 0.00 0.00 5.69
1997 2043 3.306364 CCCCAATGAAAAACAACCGCATA 60.306 43.478 0.00 0.00 0.00 3.14
1998 2044 3.677596 CCCAATGAAAAACAACCGCATAC 59.322 43.478 0.00 0.00 0.00 2.39
1999 2045 3.363426 CCAATGAAAAACAACCGCATACG 59.637 43.478 0.00 0.00 39.67 3.06
2046 2092 2.350804 GGTCGAAAGGTTAAATCTCGCC 59.649 50.000 0.00 0.00 0.00 5.54
2110 2156 4.278170 AGTCAATCTCATGCCGTTGAAAAA 59.722 37.500 7.68 0.00 32.93 1.94
2129 2175 0.879090 AAATGCGTCGGTTCCTTTCC 59.121 50.000 0.00 0.00 0.00 3.13
2130 2176 0.958876 AATGCGTCGGTTCCTTTCCC 60.959 55.000 0.00 0.00 0.00 3.97
2132 2178 1.740664 GCGTCGGTTCCTTTCCCTC 60.741 63.158 0.00 0.00 0.00 4.30
2136 2183 0.178915 TCGGTTCCTTTCCCTCCAGA 60.179 55.000 0.00 0.00 0.00 3.86
2141 2188 3.348119 GTTCCTTTCCCTCCAGACATTC 58.652 50.000 0.00 0.00 0.00 2.67
2142 2189 2.631384 TCCTTTCCCTCCAGACATTCA 58.369 47.619 0.00 0.00 0.00 2.57
2148 2195 2.025981 TCCCTCCAGACATTCAACATGG 60.026 50.000 0.00 0.00 0.00 3.66
2150 2197 3.054434 CCCTCCAGACATTCAACATGGTA 60.054 47.826 0.00 0.00 32.68 3.25
2170 2217 3.404869 ACAGATGAGGATACCACTCCA 57.595 47.619 0.00 0.00 37.81 3.86
2180 2227 3.369576 GGATACCACTCCAACACTTCCTC 60.370 52.174 0.00 0.00 35.24 3.71
2182 2229 1.694696 ACCACTCCAACACTTCCTCTC 59.305 52.381 0.00 0.00 0.00 3.20
2209 2256 2.832129 TGTCGTTATCTTTGAGCCCTCT 59.168 45.455 0.00 0.00 0.00 3.69
2216 2267 1.211456 CTTTGAGCCCTCTCTCCCAT 58.789 55.000 0.00 0.00 40.03 4.00
2239 2290 4.044571 TCAGGAGTCAATTGAGGGGAATTT 59.955 41.667 8.80 0.00 0.00 1.82
2241 2292 5.591877 CAGGAGTCAATTGAGGGGAATTTAG 59.408 44.000 8.80 0.00 0.00 1.85
2249 2300 0.917333 AGGGGAATTTAGCCACGGGA 60.917 55.000 0.00 0.00 32.78 5.14
2263 2314 4.021925 GGGACCAACGGCAGAGCT 62.022 66.667 0.00 0.00 0.00 4.09
2264 2315 2.656069 GGGACCAACGGCAGAGCTA 61.656 63.158 0.00 0.00 0.00 3.32
2265 2316 1.522569 GGACCAACGGCAGAGCTAT 59.477 57.895 0.00 0.00 0.00 2.97
2519 2570 4.634199 CCCCCAACAATCATATTTCATGC 58.366 43.478 0.00 0.00 0.00 4.06
2520 2571 4.345837 CCCCCAACAATCATATTTCATGCT 59.654 41.667 0.00 0.00 0.00 3.79
2521 2572 5.510179 CCCCCAACAATCATATTTCATGCTC 60.510 44.000 0.00 0.00 0.00 4.26
2522 2573 5.303589 CCCCAACAATCATATTTCATGCTCT 59.696 40.000 0.00 0.00 0.00 4.09
2523 2574 6.213677 CCCAACAATCATATTTCATGCTCTG 58.786 40.000 0.00 0.00 0.00 3.35
2524 2575 5.690409 CCAACAATCATATTTCATGCTCTGC 59.310 40.000 0.00 0.00 0.00 4.26
2525 2576 5.449107 ACAATCATATTTCATGCTCTGCC 57.551 39.130 0.00 0.00 0.00 4.85
2526 2577 4.280174 ACAATCATATTTCATGCTCTGCCC 59.720 41.667 0.00 0.00 0.00 5.36
2527 2578 2.867624 TCATATTTCATGCTCTGCCCC 58.132 47.619 0.00 0.00 0.00 5.80
2528 2579 1.891150 CATATTTCATGCTCTGCCCCC 59.109 52.381 0.00 0.00 0.00 5.40
2529 2580 1.225373 TATTTCATGCTCTGCCCCCT 58.775 50.000 0.00 0.00 0.00 4.79
2530 2581 0.396695 ATTTCATGCTCTGCCCCCTG 60.397 55.000 0.00 0.00 0.00 4.45
2531 2582 3.650298 TTCATGCTCTGCCCCCTGC 62.650 63.158 0.00 0.00 41.77 4.85
2535 2586 4.453892 GCTCTGCCCCCTGCCATT 62.454 66.667 0.00 0.00 40.16 3.16
2536 2587 2.123982 CTCTGCCCCCTGCCATTC 60.124 66.667 0.00 0.00 40.16 2.67
2537 2588 2.614969 TCTGCCCCCTGCCATTCT 60.615 61.111 0.00 0.00 40.16 2.40
2538 2589 2.123982 CTGCCCCCTGCCATTCTC 60.124 66.667 0.00 0.00 40.16 2.87
2539 2590 2.614969 TGCCCCCTGCCATTCTCT 60.615 61.111 0.00 0.00 40.16 3.10
2540 2591 2.123982 GCCCCCTGCCATTCTCTG 60.124 66.667 0.00 0.00 0.00 3.35
2541 2592 2.123982 CCCCCTGCCATTCTCTGC 60.124 66.667 0.00 0.00 0.00 4.26
2542 2593 2.687610 CCCCCTGCCATTCTCTGCT 61.688 63.158 0.00 0.00 0.00 4.24
2543 2594 1.348008 CCCCCTGCCATTCTCTGCTA 61.348 60.000 0.00 0.00 0.00 3.49
2544 2595 0.108207 CCCCTGCCATTCTCTGCTAG 59.892 60.000 0.00 0.00 0.00 3.42
2545 2596 0.534652 CCCTGCCATTCTCTGCTAGC 60.535 60.000 8.10 8.10 0.00 3.42
2546 2597 0.469070 CCTGCCATTCTCTGCTAGCT 59.531 55.000 17.23 0.00 0.00 3.32
2547 2598 1.540797 CCTGCCATTCTCTGCTAGCTC 60.541 57.143 17.23 0.00 0.00 4.09
2548 2599 0.467384 TGCCATTCTCTGCTAGCTCC 59.533 55.000 17.23 0.00 0.00 4.70
2549 2600 0.599728 GCCATTCTCTGCTAGCTCCG 60.600 60.000 17.23 4.62 0.00 4.63
2550 2601 0.599728 CCATTCTCTGCTAGCTCCGC 60.600 60.000 17.23 0.00 0.00 5.54
2551 2602 0.599728 CATTCTCTGCTAGCTCCGCC 60.600 60.000 17.23 0.00 0.00 6.13
2552 2603 1.045350 ATTCTCTGCTAGCTCCGCCA 61.045 55.000 17.23 0.00 0.00 5.69
2553 2604 1.949847 TTCTCTGCTAGCTCCGCCAC 61.950 60.000 17.23 0.00 0.00 5.01
2554 2605 2.363018 TCTGCTAGCTCCGCCACT 60.363 61.111 17.23 0.00 0.00 4.00
2555 2606 2.202851 CTGCTAGCTCCGCCACTG 60.203 66.667 17.23 0.00 0.00 3.66
2556 2607 2.997315 TGCTAGCTCCGCCACTGT 60.997 61.111 17.23 0.00 0.00 3.55
2557 2608 1.667154 CTGCTAGCTCCGCCACTGTA 61.667 60.000 17.23 0.00 0.00 2.74
2558 2609 1.227002 GCTAGCTCCGCCACTGTAC 60.227 63.158 7.70 0.00 0.00 2.90
2559 2610 1.064296 CTAGCTCCGCCACTGTACG 59.936 63.158 0.00 0.00 0.00 3.67
2560 2611 1.374343 CTAGCTCCGCCACTGTACGA 61.374 60.000 0.00 0.00 0.00 3.43
2561 2612 1.374343 TAGCTCCGCCACTGTACGAG 61.374 60.000 0.00 2.19 0.00 4.18
2562 2613 2.697761 GCTCCGCCACTGTACGAGA 61.698 63.158 4.20 0.47 0.00 4.04
2563 2614 1.136984 CTCCGCCACTGTACGAGAC 59.863 63.158 4.20 0.00 0.00 3.36
2564 2615 1.303074 TCCGCCACTGTACGAGACT 60.303 57.895 4.20 0.00 0.00 3.24
2565 2616 0.036105 TCCGCCACTGTACGAGACTA 60.036 55.000 4.20 0.00 0.00 2.59
2566 2617 0.806868 CCGCCACTGTACGAGACTAA 59.193 55.000 4.20 0.00 0.00 2.24
2567 2618 1.404391 CCGCCACTGTACGAGACTAAT 59.596 52.381 4.20 0.00 0.00 1.73
2576 2627 4.018490 TGTACGAGACTAATGGTTGGCTA 58.982 43.478 0.00 0.00 0.00 3.93
2580 2631 3.707793 GAGACTAATGGTTGGCTAGTCG 58.292 50.000 4.35 0.00 44.10 4.18
2583 2634 2.829720 ACTAATGGTTGGCTAGTCGTCA 59.170 45.455 0.00 0.00 0.00 4.35
2585 2636 3.350219 AATGGTTGGCTAGTCGTCAAT 57.650 42.857 0.00 0.00 39.79 2.57
2606 2657 4.648626 GCTGAGCACCAGGCCACA 62.649 66.667 5.01 0.00 46.50 4.17
2607 2658 2.113774 CTGAGCACCAGGCCACAA 59.886 61.111 5.01 0.00 46.50 3.33
2612 2663 3.677648 CACCAGGCCACAAGCTGC 61.678 66.667 5.01 0.00 43.05 5.25
2614 2665 3.371063 CCAGGCCACAAGCTGCTG 61.371 66.667 5.01 0.00 43.05 4.41
2615 2666 4.052229 CAGGCCACAAGCTGCTGC 62.052 66.667 5.01 7.62 43.05 5.25
2617 2668 3.608662 GGCCACAAGCTGCTGCAA 61.609 61.111 18.42 0.00 43.05 4.08
2635 2686 2.036346 GCAATGAAAGGGCAGTCTTTGT 59.964 45.455 4.11 0.00 37.13 2.83
2664 2715 0.322277 ATGCAGTCTTGAGGGCACTG 60.322 55.000 0.00 0.00 39.34 3.66
2668 2719 0.972883 AGTCTTGAGGGCACTGAGAC 59.027 55.000 17.42 17.42 37.03 3.36
2679 2730 0.873054 CACTGAGACAAAGCTGGCAG 59.127 55.000 10.94 10.94 30.13 4.85
2693 2744 1.486310 CTGGCAGACAGGGTAATGCTA 59.514 52.381 9.42 0.72 43.70 3.49
2701 2752 4.900815 GGTAATGCTACCAGCCCC 57.099 61.111 0.00 0.00 46.23 5.80
2720 2771 2.249413 CTCCTGGCAAGGCGATCAGT 62.249 60.000 0.56 0.00 44.11 3.41
2731 2782 3.855630 CGATCAGTCGTGAGGATCC 57.144 57.895 2.48 2.48 42.78 3.36
2744 2795 4.698575 GTGAGGATCCTGTTATGAAGGAC 58.301 47.826 22.02 0.00 46.51 3.85
2745 2796 4.162320 GTGAGGATCCTGTTATGAAGGACA 59.838 45.833 22.02 2.81 46.51 4.02
2746 2797 4.782691 TGAGGATCCTGTTATGAAGGACAA 59.217 41.667 22.02 0.00 46.51 3.18
2749 2800 2.972625 TCCTGTTATGAAGGACAAGCG 58.027 47.619 0.00 0.00 38.96 4.68
2773 2824 5.625150 AGAAGAACAATCTACACTTTGGCT 58.375 37.500 0.00 0.00 33.77 4.75
2781 2832 4.389576 CACTTTGGCTCCGCGTGC 62.390 66.667 4.92 9.24 0.00 5.34
2802 2853 2.412847 CGCTTTCCAGATTTTGTCGGTC 60.413 50.000 0.00 0.00 0.00 4.79
2806 2857 1.616865 TCCAGATTTTGTCGGTCGAGT 59.383 47.619 0.00 0.00 0.00 4.18
2811 2862 4.684703 CAGATTTTGTCGGTCGAGTACTTT 59.315 41.667 0.00 0.00 0.00 2.66
2812 2863 4.684703 AGATTTTGTCGGTCGAGTACTTTG 59.315 41.667 0.00 0.00 0.00 2.77
2835 2886 1.660560 GCGAGCCCATGATTTGCACT 61.661 55.000 0.00 0.00 0.00 4.40
2843 2894 3.091545 CCATGATTTGCACTTGGTAGGT 58.908 45.455 0.00 0.00 0.00 3.08
2845 2896 2.422597 TGATTTGCACTTGGTAGGTCG 58.577 47.619 0.00 0.00 0.00 4.79
2848 2899 2.851263 TTGCACTTGGTAGGTCGAAT 57.149 45.000 0.00 0.00 0.00 3.34
2850 2901 2.422597 TGCACTTGGTAGGTCGAATTG 58.577 47.619 0.00 0.00 0.00 2.32
2871 2922 2.629051 GACGAGTATTCCCCACTTTGG 58.371 52.381 0.00 0.00 37.25 3.28
2878 2929 1.217916 TTCCCCACTTTGGTGACAGA 58.782 50.000 0.00 0.00 45.61 3.41
2880 2931 1.351017 TCCCCACTTTGGTGACAGATC 59.649 52.381 0.00 0.00 45.61 2.75
2890 2941 2.292455 TGGTGACAGATCCAGGAGATGA 60.292 50.000 10.12 0.00 31.85 2.92
2916 2967 3.589988 CTGCTTAAGTGGGTACAGAGTG 58.410 50.000 4.02 0.00 0.00 3.51
2928 2979 0.398522 ACAGAGTGGTGGAGGTGACA 60.399 55.000 0.00 0.00 0.00 3.58
2988 3039 3.610669 CTCAGCCTAGCCGCCGAT 61.611 66.667 0.00 0.00 0.00 4.18
2995 3046 1.527433 CCTAGCCGCCGATCTGATCA 61.527 60.000 17.19 0.00 0.00 2.92
2996 3047 0.315251 CTAGCCGCCGATCTGATCAA 59.685 55.000 17.19 0.00 0.00 2.57
2997 3048 0.969149 TAGCCGCCGATCTGATCAAT 59.031 50.000 17.19 0.00 0.00 2.57
2998 3049 0.107456 AGCCGCCGATCTGATCAATT 59.893 50.000 17.19 0.00 0.00 2.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.658285 CATCCAGCTGCCAATAAGGAA 58.342 47.619 8.66 0.00 41.22 3.36
4 5 1.746861 CGTCCATCCAGCTGCCAATAA 60.747 52.381 8.66 0.00 0.00 1.40
5 6 0.179048 CGTCCATCCAGCTGCCAATA 60.179 55.000 8.66 0.00 0.00 1.90
6 7 1.452651 CGTCCATCCAGCTGCCAAT 60.453 57.895 8.66 0.00 0.00 3.16
7 8 2.046023 CGTCCATCCAGCTGCCAA 60.046 61.111 8.66 0.00 0.00 4.52
8 9 4.100084 CCGTCCATCCAGCTGCCA 62.100 66.667 8.66 0.00 0.00 4.92
9 10 4.101448 ACCGTCCATCCAGCTGCC 62.101 66.667 8.66 0.00 0.00 4.85
10 11 2.821366 CACCGTCCATCCAGCTGC 60.821 66.667 8.66 0.00 0.00 5.25
11 12 1.003355 AACACCGTCCATCCAGCTG 60.003 57.895 6.78 6.78 0.00 4.24
12 13 1.296715 GAACACCGTCCATCCAGCT 59.703 57.895 0.00 0.00 0.00 4.24
13 14 1.003839 TGAACACCGTCCATCCAGC 60.004 57.895 0.00 0.00 0.00 4.85
14 15 0.391661 CCTGAACACCGTCCATCCAG 60.392 60.000 0.00 0.00 0.00 3.86
15 16 1.676968 CCTGAACACCGTCCATCCA 59.323 57.895 0.00 0.00 0.00 3.41
16 17 1.078426 CCCTGAACACCGTCCATCC 60.078 63.158 0.00 0.00 0.00 3.51
17 18 1.078426 CCCCTGAACACCGTCCATC 60.078 63.158 0.00 0.00 0.00 3.51
18 19 2.602676 CCCCCTGAACACCGTCCAT 61.603 63.158 0.00 0.00 0.00 3.41
19 20 3.246112 CCCCCTGAACACCGTCCA 61.246 66.667 0.00 0.00 0.00 4.02
43 44 3.607370 GAACTGACCCCTCCACCGC 62.607 68.421 0.00 0.00 0.00 5.68
44 45 1.553690 ATGAACTGACCCCTCCACCG 61.554 60.000 0.00 0.00 0.00 4.94
45 46 0.035056 CATGAACTGACCCCTCCACC 60.035 60.000 0.00 0.00 0.00 4.61
46 47 0.678048 GCATGAACTGACCCCTCCAC 60.678 60.000 0.00 0.00 0.00 4.02
47 48 0.842030 AGCATGAACTGACCCCTCCA 60.842 55.000 0.00 0.00 0.00 3.86
48 49 0.107459 GAGCATGAACTGACCCCTCC 60.107 60.000 0.00 0.00 0.00 4.30
49 50 0.460987 CGAGCATGAACTGACCCCTC 60.461 60.000 0.00 0.00 0.00 4.30
50 51 0.904865 TCGAGCATGAACTGACCCCT 60.905 55.000 0.00 0.00 0.00 4.79
51 52 0.460987 CTCGAGCATGAACTGACCCC 60.461 60.000 0.00 0.00 0.00 4.95
52 53 0.460987 CCTCGAGCATGAACTGACCC 60.461 60.000 6.99 0.00 0.00 4.46
53 54 1.086634 GCCTCGAGCATGAACTGACC 61.087 60.000 6.99 0.00 42.97 4.02
54 55 1.086634 GGCCTCGAGCATGAACTGAC 61.087 60.000 6.99 0.00 46.50 3.51
55 56 1.219124 GGCCTCGAGCATGAACTGA 59.781 57.895 6.99 0.00 46.50 3.41
56 57 1.817099 GGGCCTCGAGCATGAACTG 60.817 63.158 6.99 0.00 46.50 3.16
57 58 2.293318 TGGGCCTCGAGCATGAACT 61.293 57.895 6.99 0.00 46.50 3.01
58 59 2.109126 GTGGGCCTCGAGCATGAAC 61.109 63.158 6.99 0.00 46.50 3.18
59 60 0.975556 TAGTGGGCCTCGAGCATGAA 60.976 55.000 6.99 0.00 46.50 2.57
60 61 1.381191 TAGTGGGCCTCGAGCATGA 60.381 57.895 6.99 0.00 46.50 3.07
61 62 1.068753 CTAGTGGGCCTCGAGCATG 59.931 63.158 6.99 0.00 46.50 4.06
62 63 2.801631 GCTAGTGGGCCTCGAGCAT 61.802 63.158 28.31 3.03 46.50 3.79
63 64 3.461773 GCTAGTGGGCCTCGAGCA 61.462 66.667 28.31 0.00 46.50 4.26
64 65 3.438017 CTGCTAGTGGGCCTCGAGC 62.438 68.421 27.12 27.12 42.60 5.03
65 66 1.323271 TTCTGCTAGTGGGCCTCGAG 61.323 60.000 5.13 5.13 0.00 4.04
66 67 1.304962 TTCTGCTAGTGGGCCTCGA 60.305 57.895 4.53 0.00 0.00 4.04
67 68 1.153549 GTTCTGCTAGTGGGCCTCG 60.154 63.158 4.53 0.00 0.00 4.63
68 69 0.176910 GAGTTCTGCTAGTGGGCCTC 59.823 60.000 4.53 0.00 0.00 4.70
69 70 1.268283 GGAGTTCTGCTAGTGGGCCT 61.268 60.000 4.53 0.00 0.00 5.19
70 71 1.222113 GGAGTTCTGCTAGTGGGCC 59.778 63.158 0.00 0.00 0.00 5.80
71 72 1.222113 GGGAGTTCTGCTAGTGGGC 59.778 63.158 0.00 0.00 0.00 5.36
72 73 0.539051 CAGGGAGTTCTGCTAGTGGG 59.461 60.000 0.00 0.00 0.00 4.61
80 81 1.374758 GGTGTCGCAGGGAGTTCTG 60.375 63.158 0.00 0.00 37.79 3.02
81 82 2.932234 CGGTGTCGCAGGGAGTTCT 61.932 63.158 0.00 0.00 0.00 3.01
82 83 2.432628 CGGTGTCGCAGGGAGTTC 60.433 66.667 0.00 0.00 0.00 3.01
92 93 3.358076 GAGGGAAGAGGCGGTGTCG 62.358 68.421 0.00 0.00 39.81 4.35
93 94 1.950973 GAGAGGGAAGAGGCGGTGTC 61.951 65.000 0.00 0.00 0.00 3.67
94 95 1.985116 GAGAGGGAAGAGGCGGTGT 60.985 63.158 0.00 0.00 0.00 4.16
95 96 1.333636 ATGAGAGGGAAGAGGCGGTG 61.334 60.000 0.00 0.00 0.00 4.94
96 97 1.002274 ATGAGAGGGAAGAGGCGGT 59.998 57.895 0.00 0.00 0.00 5.68
97 98 1.333636 ACATGAGAGGGAAGAGGCGG 61.334 60.000 0.00 0.00 0.00 6.13
98 99 0.539051 AACATGAGAGGGAAGAGGCG 59.461 55.000 0.00 0.00 0.00 5.52
99 100 2.016096 GCAACATGAGAGGGAAGAGGC 61.016 57.143 0.00 0.00 0.00 4.70
100 101 1.407989 GGCAACATGAGAGGGAAGAGG 60.408 57.143 0.00 0.00 0.00 3.69
101 102 1.558756 AGGCAACATGAGAGGGAAGAG 59.441 52.381 0.00 0.00 41.41 2.85
102 103 1.556911 GAGGCAACATGAGAGGGAAGA 59.443 52.381 0.00 0.00 41.41 2.87
103 104 1.407989 GGAGGCAACATGAGAGGGAAG 60.408 57.143 0.00 0.00 41.41 3.46
104 105 0.620556 GGAGGCAACATGAGAGGGAA 59.379 55.000 0.00 0.00 41.41 3.97
105 106 0.252881 AGGAGGCAACATGAGAGGGA 60.253 55.000 0.00 0.00 41.41 4.20
106 107 0.622665 AAGGAGGCAACATGAGAGGG 59.377 55.000 0.00 0.00 41.41 4.30
107 108 1.741732 CGAAGGAGGCAACATGAGAGG 60.742 57.143 0.00 0.00 41.41 3.69
108 109 1.649664 CGAAGGAGGCAACATGAGAG 58.350 55.000 0.00 0.00 41.41 3.20
109 110 0.391661 GCGAAGGAGGCAACATGAGA 60.392 55.000 0.00 0.00 41.41 3.27
110 111 1.372087 GGCGAAGGAGGCAACATGAG 61.372 60.000 0.00 0.00 41.41 2.90
111 112 1.377202 GGCGAAGGAGGCAACATGA 60.377 57.895 0.00 0.00 41.41 3.07
112 113 2.753966 CGGCGAAGGAGGCAACATG 61.754 63.158 0.00 0.00 41.41 3.21
113 114 2.436646 CGGCGAAGGAGGCAACAT 60.437 61.111 0.00 0.00 41.41 2.71
114 115 4.697756 CCGGCGAAGGAGGCAACA 62.698 66.667 9.30 0.00 41.41 3.33
115 116 4.699522 ACCGGCGAAGGAGGCAAC 62.700 66.667 9.30 0.00 36.37 4.17
116 117 4.388499 GACCGGCGAAGGAGGCAA 62.388 66.667 9.30 0.00 36.37 4.52
120 121 3.839432 GAGGGACCGGCGAAGGAG 61.839 72.222 9.30 0.00 34.73 3.69
135 136 1.227089 CAGAGAACATCGCCCGGAG 60.227 63.158 0.73 0.00 0.00 4.63
136 137 2.721167 CCAGAGAACATCGCCCGGA 61.721 63.158 0.73 0.00 0.00 5.14
137 138 2.202932 CCAGAGAACATCGCCCGG 60.203 66.667 0.00 0.00 0.00 5.73
138 139 2.859273 AAGCCAGAGAACATCGCCCG 62.859 60.000 0.00 0.00 0.00 6.13
139 140 1.078143 AAGCCAGAGAACATCGCCC 60.078 57.895 0.00 0.00 0.00 6.13
140 141 1.986575 GCAAGCCAGAGAACATCGCC 61.987 60.000 0.00 0.00 0.00 5.54
141 142 1.300971 TGCAAGCCAGAGAACATCGC 61.301 55.000 0.00 0.00 0.00 4.58
142 143 0.725686 CTGCAAGCCAGAGAACATCG 59.274 55.000 0.00 0.00 44.64 3.84
143 144 1.093159 CCTGCAAGCCAGAGAACATC 58.907 55.000 0.00 0.00 44.64 3.06
144 145 0.964358 GCCTGCAAGCCAGAGAACAT 60.964 55.000 0.00 0.00 44.64 2.71
145 146 1.601759 GCCTGCAAGCCAGAGAACA 60.602 57.895 0.00 0.00 44.64 3.18
146 147 3.272031 GCCTGCAAGCCAGAGAAC 58.728 61.111 0.00 0.00 44.64 3.01
154 155 2.151049 CTTGGTTCAGGCCTGCAAGC 62.151 60.000 27.90 27.25 0.00 4.01
155 156 1.530013 CCTTGGTTCAGGCCTGCAAG 61.530 60.000 30.19 30.19 32.02 4.01
156 157 1.531365 CCTTGGTTCAGGCCTGCAA 60.531 57.895 28.91 23.27 0.00 4.08
157 158 1.792757 ATCCTTGGTTCAGGCCTGCA 61.793 55.000 28.91 15.88 33.35 4.41
158 159 1.000396 ATCCTTGGTTCAGGCCTGC 60.000 57.895 28.91 14.98 33.35 4.85
159 160 0.682209 CCATCCTTGGTTCAGGCCTG 60.682 60.000 27.87 27.87 38.30 4.85
160 161 1.693640 CCATCCTTGGTTCAGGCCT 59.306 57.895 0.00 0.00 38.30 5.19
161 162 1.380380 CCCATCCTTGGTTCAGGCC 60.380 63.158 0.00 0.00 41.91 5.19
162 163 0.394899 CTCCCATCCTTGGTTCAGGC 60.395 60.000 0.00 0.00 41.91 4.85
163 164 0.394899 GCTCCCATCCTTGGTTCAGG 60.395 60.000 0.00 0.00 41.91 3.86
164 165 0.394899 GGCTCCCATCCTTGGTTCAG 60.395 60.000 0.00 0.00 41.91 3.02
165 166 1.691219 GGCTCCCATCCTTGGTTCA 59.309 57.895 0.00 0.00 41.91 3.18
166 167 1.076705 GGGCTCCCATCCTTGGTTC 60.077 63.158 0.00 0.00 41.91 3.62
167 168 2.626467 GGGGCTCCCATCCTTGGTT 61.626 63.158 7.34 0.00 44.65 3.67
168 169 3.023735 GGGGCTCCCATCCTTGGT 61.024 66.667 7.34 0.00 44.65 3.67
188 189 3.692406 ACAACCTCGGACTCGCCC 61.692 66.667 0.00 0.00 36.13 6.13
189 190 2.432628 CACAACCTCGGACTCGCC 60.433 66.667 0.00 0.00 36.13 5.54
190 191 1.733399 GACACAACCTCGGACTCGC 60.733 63.158 0.00 0.00 36.13 5.03
191 192 1.080705 GGACACAACCTCGGACTCG 60.081 63.158 0.00 0.00 37.82 4.18
192 193 1.080705 CGGACACAACCTCGGACTC 60.081 63.158 0.00 0.00 0.00 3.36
193 194 1.831286 ACGGACACAACCTCGGACT 60.831 57.895 0.00 0.00 0.00 3.85
194 195 1.663702 CACGGACACAACCTCGGAC 60.664 63.158 0.00 0.00 0.00 4.79
195 196 1.829096 TCACGGACACAACCTCGGA 60.829 57.895 0.00 0.00 0.00 4.55
196 197 1.663702 GTCACGGACACAACCTCGG 60.664 63.158 0.00 0.00 32.09 4.63
197 198 2.014554 CGTCACGGACACAACCTCG 61.015 63.158 0.00 0.00 32.09 4.63
198 199 3.932289 CGTCACGGACACAACCTC 58.068 61.111 0.00 0.00 32.09 3.85
217 218 2.125269 CCTAAGCGTCCCCAACCG 60.125 66.667 0.00 0.00 0.00 4.44
218 219 2.271173 CCCTAAGCGTCCCCAACC 59.729 66.667 0.00 0.00 0.00 3.77
219 220 2.437895 GCCCTAAGCGTCCCCAAC 60.438 66.667 0.00 0.00 0.00 3.77
228 229 2.203209 CCATCCACCGCCCTAAGC 60.203 66.667 0.00 0.00 38.52 3.09
229 230 2.510906 CCCATCCACCGCCCTAAG 59.489 66.667 0.00 0.00 0.00 2.18
230 231 3.093835 CCCCATCCACCGCCCTAA 61.094 66.667 0.00 0.00 0.00 2.69
250 251 4.864334 CCCCTCATCTGTGCCGCC 62.864 72.222 0.00 0.00 0.00 6.13
251 252 4.864334 CCCCCTCATCTGTGCCGC 62.864 72.222 0.00 0.00 0.00 6.53
252 253 2.599645 CTTCCCCCTCATCTGTGCCG 62.600 65.000 0.00 0.00 0.00 5.69
253 254 1.225704 CTTCCCCCTCATCTGTGCC 59.774 63.158 0.00 0.00 0.00 5.01
254 255 1.225704 CCTTCCCCCTCATCTGTGC 59.774 63.158 0.00 0.00 0.00 4.57
255 256 0.916358 ACCCTTCCCCCTCATCTGTG 60.916 60.000 0.00 0.00 0.00 3.66
256 257 0.916358 CACCCTTCCCCCTCATCTGT 60.916 60.000 0.00 0.00 0.00 3.41
257 258 1.639635 CCACCCTTCCCCCTCATCTG 61.640 65.000 0.00 0.00 0.00 2.90
258 259 1.308216 CCACCCTTCCCCCTCATCT 60.308 63.158 0.00 0.00 0.00 2.90
259 260 1.307866 TCCACCCTTCCCCCTCATC 60.308 63.158 0.00 0.00 0.00 2.92
260 261 1.619669 GTCCACCCTTCCCCCTCAT 60.620 63.158 0.00 0.00 0.00 2.90
261 262 2.204090 GTCCACCCTTCCCCCTCA 60.204 66.667 0.00 0.00 0.00 3.86
262 263 3.400054 CGTCCACCCTTCCCCCTC 61.400 72.222 0.00 0.00 0.00 4.30
263 264 3.268647 ATCGTCCACCCTTCCCCCT 62.269 63.158 0.00 0.00 0.00 4.79
264 265 2.691252 ATCGTCCACCCTTCCCCC 60.691 66.667 0.00 0.00 0.00 5.40
265 266 2.298661 ACATCGTCCACCCTTCCCC 61.299 63.158 0.00 0.00 0.00 4.81
266 267 1.078426 CACATCGTCCACCCTTCCC 60.078 63.158 0.00 0.00 0.00 3.97
267 268 0.391263 GTCACATCGTCCACCCTTCC 60.391 60.000 0.00 0.00 0.00 3.46
268 269 0.608640 AGTCACATCGTCCACCCTTC 59.391 55.000 0.00 0.00 0.00 3.46
269 270 0.321671 CAGTCACATCGTCCACCCTT 59.678 55.000 0.00 0.00 0.00 3.95
270 271 1.975327 CAGTCACATCGTCCACCCT 59.025 57.895 0.00 0.00 0.00 4.34
271 272 1.741770 GCAGTCACATCGTCCACCC 60.742 63.158 0.00 0.00 0.00 4.61
272 273 0.737715 GAGCAGTCACATCGTCCACC 60.738 60.000 0.00 0.00 0.00 4.61
273 274 1.073216 CGAGCAGTCACATCGTCCAC 61.073 60.000 0.00 0.00 0.00 4.02
274 275 1.212751 CGAGCAGTCACATCGTCCA 59.787 57.895 0.00 0.00 0.00 4.02
275 276 1.517257 CCGAGCAGTCACATCGTCC 60.517 63.158 0.00 0.00 34.71 4.79
276 277 0.101399 ATCCGAGCAGTCACATCGTC 59.899 55.000 0.00 0.00 34.71 4.20
277 278 0.179127 CATCCGAGCAGTCACATCGT 60.179 55.000 0.00 0.00 34.71 3.73
278 279 1.485838 GCATCCGAGCAGTCACATCG 61.486 60.000 0.00 0.00 36.24 3.84
279 280 0.460811 TGCATCCGAGCAGTCACATC 60.461 55.000 0.00 0.00 40.11 3.06
280 281 1.598517 TGCATCCGAGCAGTCACAT 59.401 52.632 0.00 0.00 40.11 3.21
281 282 3.059099 TGCATCCGAGCAGTCACA 58.941 55.556 0.00 0.00 40.11 3.58
287 288 1.097232 CCATTTTCTGCATCCGAGCA 58.903 50.000 0.00 0.00 43.35 4.26
288 289 1.098050 ACCATTTTCTGCATCCGAGC 58.902 50.000 0.00 0.00 0.00 5.03
289 290 1.402968 CCACCATTTTCTGCATCCGAG 59.597 52.381 0.00 0.00 0.00 4.63
290 291 1.004161 TCCACCATTTTCTGCATCCGA 59.996 47.619 0.00 0.00 0.00 4.55
291 292 1.133025 GTCCACCATTTTCTGCATCCG 59.867 52.381 0.00 0.00 0.00 4.18
292 293 1.133025 CGTCCACCATTTTCTGCATCC 59.867 52.381 0.00 0.00 0.00 3.51
293 294 2.083774 TCGTCCACCATTTTCTGCATC 58.916 47.619 0.00 0.00 0.00 3.91
294 295 2.198827 TCGTCCACCATTTTCTGCAT 57.801 45.000 0.00 0.00 0.00 3.96
295 296 1.606668 GTTCGTCCACCATTTTCTGCA 59.393 47.619 0.00 0.00 0.00 4.41
296 297 1.399727 CGTTCGTCCACCATTTTCTGC 60.400 52.381 0.00 0.00 0.00 4.26
297 298 1.871039 ACGTTCGTCCACCATTTTCTG 59.129 47.619 0.00 0.00 0.00 3.02
298 299 1.871039 CACGTTCGTCCACCATTTTCT 59.129 47.619 0.00 0.00 0.00 2.52
299 300 1.069500 CCACGTTCGTCCACCATTTTC 60.069 52.381 0.00 0.00 0.00 2.29
300 301 0.948678 CCACGTTCGTCCACCATTTT 59.051 50.000 0.00 0.00 0.00 1.82
301 302 0.107081 TCCACGTTCGTCCACCATTT 59.893 50.000 0.00 0.00 0.00 2.32
302 303 0.107081 TTCCACGTTCGTCCACCATT 59.893 50.000 0.00 0.00 0.00 3.16
303 304 0.320421 CTTCCACGTTCGTCCACCAT 60.320 55.000 0.00 0.00 0.00 3.55
304 305 1.068417 CTTCCACGTTCGTCCACCA 59.932 57.895 0.00 0.00 0.00 4.17
305 306 1.666872 CCTTCCACGTTCGTCCACC 60.667 63.158 0.00 0.00 0.00 4.61
306 307 0.249573 TTCCTTCCACGTTCGTCCAC 60.250 55.000 0.00 0.00 0.00 4.02
307 308 0.032952 CTTCCTTCCACGTTCGTCCA 59.967 55.000 0.00 0.00 0.00 4.02
308 309 0.669625 CCTTCCTTCCACGTTCGTCC 60.670 60.000 0.00 0.00 0.00 4.79
309 310 1.289800 GCCTTCCTTCCACGTTCGTC 61.290 60.000 0.00 0.00 0.00 4.20
310 311 1.301479 GCCTTCCTTCCACGTTCGT 60.301 57.895 0.00 0.00 0.00 3.85
311 312 2.380410 CGCCTTCCTTCCACGTTCG 61.380 63.158 0.00 0.00 0.00 3.95
312 313 0.391263 ATCGCCTTCCTTCCACGTTC 60.391 55.000 0.00 0.00 0.00 3.95
313 314 0.673644 CATCGCCTTCCTTCCACGTT 60.674 55.000 0.00 0.00 0.00 3.99
314 315 1.079127 CATCGCCTTCCTTCCACGT 60.079 57.895 0.00 0.00 0.00 4.49
315 316 0.807667 CTCATCGCCTTCCTTCCACG 60.808 60.000 0.00 0.00 0.00 4.94
316 317 0.250513 ACTCATCGCCTTCCTTCCAC 59.749 55.000 0.00 0.00 0.00 4.02
317 318 0.984230 AACTCATCGCCTTCCTTCCA 59.016 50.000 0.00 0.00 0.00 3.53
318 319 1.740025 CAAACTCATCGCCTTCCTTCC 59.260 52.381 0.00 0.00 0.00 3.46
319 320 2.416893 GTCAAACTCATCGCCTTCCTTC 59.583 50.000 0.00 0.00 0.00 3.46
320 321 2.427506 GTCAAACTCATCGCCTTCCTT 58.572 47.619 0.00 0.00 0.00 3.36
321 322 1.673033 CGTCAAACTCATCGCCTTCCT 60.673 52.381 0.00 0.00 0.00 3.36
322 323 0.721718 CGTCAAACTCATCGCCTTCC 59.278 55.000 0.00 0.00 0.00 3.46
323 324 0.721718 CCGTCAAACTCATCGCCTTC 59.278 55.000 0.00 0.00 0.00 3.46
324 325 0.320374 TCCGTCAAACTCATCGCCTT 59.680 50.000 0.00 0.00 0.00 4.35
325 326 0.389948 GTCCGTCAAACTCATCGCCT 60.390 55.000 0.00 0.00 0.00 5.52
326 327 0.389948 AGTCCGTCAAACTCATCGCC 60.390 55.000 0.00 0.00 0.00 5.54
327 328 2.186076 CTAGTCCGTCAAACTCATCGC 58.814 52.381 0.00 0.00 0.00 4.58
328 329 2.798680 CCTAGTCCGTCAAACTCATCG 58.201 52.381 0.00 0.00 0.00 3.84
329 330 2.541556 GCCTAGTCCGTCAAACTCATC 58.458 52.381 0.00 0.00 0.00 2.92
330 331 1.207329 GGCCTAGTCCGTCAAACTCAT 59.793 52.381 0.00 0.00 0.00 2.90
331 332 0.606604 GGCCTAGTCCGTCAAACTCA 59.393 55.000 0.00 0.00 0.00 3.41
332 333 0.606604 TGGCCTAGTCCGTCAAACTC 59.393 55.000 3.32 0.00 0.00 3.01
333 334 1.276622 ATGGCCTAGTCCGTCAAACT 58.723 50.000 3.32 0.00 0.00 2.66
334 335 2.109425 AATGGCCTAGTCCGTCAAAC 57.891 50.000 3.32 0.00 0.00 2.93
335 336 2.817258 CAAAATGGCCTAGTCCGTCAAA 59.183 45.455 3.32 0.00 0.00 2.69
336 337 2.432444 CAAAATGGCCTAGTCCGTCAA 58.568 47.619 3.32 0.00 0.00 3.18
337 338 1.339631 CCAAAATGGCCTAGTCCGTCA 60.340 52.381 3.32 0.00 0.00 4.35
338 339 1.339727 ACCAAAATGGCCTAGTCCGTC 60.340 52.381 3.32 0.00 42.67 4.79
339 340 0.696501 ACCAAAATGGCCTAGTCCGT 59.303 50.000 3.32 0.00 42.67 4.69
340 341 1.094785 CACCAAAATGGCCTAGTCCG 58.905 55.000 3.32 0.00 42.67 4.79
341 342 2.215942 ACACCAAAATGGCCTAGTCC 57.784 50.000 3.32 0.00 42.67 3.85
342 343 5.394115 CCAATTACACCAAAATGGCCTAGTC 60.394 44.000 3.32 0.00 42.67 2.59
343 344 4.466015 CCAATTACACCAAAATGGCCTAGT 59.534 41.667 3.32 0.00 42.67 2.57
344 345 4.141959 CCCAATTACACCAAAATGGCCTAG 60.142 45.833 3.32 0.00 42.67 3.02
345 346 3.772025 CCCAATTACACCAAAATGGCCTA 59.228 43.478 3.32 0.00 42.67 3.93
346 347 2.571202 CCCAATTACACCAAAATGGCCT 59.429 45.455 3.32 0.00 42.67 5.19
347 348 2.569404 TCCCAATTACACCAAAATGGCC 59.431 45.455 0.00 0.00 42.67 5.36
348 349 3.971245 TCCCAATTACACCAAAATGGC 57.029 42.857 0.00 0.00 42.67 4.40
349 350 5.070313 CCCTATCCCAATTACACCAAAATGG 59.930 44.000 0.00 0.00 45.02 3.16
350 351 5.660864 ACCCTATCCCAATTACACCAAAATG 59.339 40.000 0.00 0.00 0.00 2.32
351 352 5.849140 ACCCTATCCCAATTACACCAAAAT 58.151 37.500 0.00 0.00 0.00 1.82
352 353 5.265989 GACCCTATCCCAATTACACCAAAA 58.734 41.667 0.00 0.00 0.00 2.44
353 354 4.325501 GGACCCTATCCCAATTACACCAAA 60.326 45.833 0.00 0.00 42.46 3.28
354 355 3.203487 GGACCCTATCCCAATTACACCAA 59.797 47.826 0.00 0.00 42.46 3.67
355 356 2.781174 GGACCCTATCCCAATTACACCA 59.219 50.000 0.00 0.00 42.46 4.17
356 357 3.503800 GGACCCTATCCCAATTACACC 57.496 52.381 0.00 0.00 42.46 4.16
366 367 9.990885 CACATCTAACACATGTGGACCCTATCC 62.991 48.148 28.64 0.00 45.06 2.59
367 368 5.163301 ACATCTAACACATGTGGACCCTATC 60.163 44.000 28.64 0.00 33.04 2.08
368 369 4.721776 ACATCTAACACATGTGGACCCTAT 59.278 41.667 28.64 11.82 33.04 2.57
369 370 4.081142 CACATCTAACACATGTGGACCCTA 60.081 45.833 28.64 10.10 45.06 3.53
370 371 2.912956 ACATCTAACACATGTGGACCCT 59.087 45.455 28.64 5.40 33.04 4.34
371 372 3.009723 CACATCTAACACATGTGGACCC 58.990 50.000 28.64 0.00 45.06 4.46
377 378 3.674997 GTCCACCACATCTAACACATGT 58.325 45.455 0.00 0.00 34.67 3.21
378 379 2.672874 CGTCCACCACATCTAACACATG 59.327 50.000 0.00 0.00 0.00 3.21
379 380 2.935238 GCGTCCACCACATCTAACACAT 60.935 50.000 0.00 0.00 0.00 3.21
380 381 1.606994 GCGTCCACCACATCTAACACA 60.607 52.381 0.00 0.00 0.00 3.72
381 382 1.076332 GCGTCCACCACATCTAACAC 58.924 55.000 0.00 0.00 0.00 3.32
382 383 0.389296 CGCGTCCACCACATCTAACA 60.389 55.000 0.00 0.00 0.00 2.41
383 384 0.108992 TCGCGTCCACCACATCTAAC 60.109 55.000 5.77 0.00 0.00 2.34
384 385 0.108992 GTCGCGTCCACCACATCTAA 60.109 55.000 5.77 0.00 0.00 2.10
385 386 0.963856 AGTCGCGTCCACCACATCTA 60.964 55.000 5.77 0.00 0.00 1.98
386 387 0.963856 TAGTCGCGTCCACCACATCT 60.964 55.000 5.77 0.00 0.00 2.90
387 388 0.525668 CTAGTCGCGTCCACCACATC 60.526 60.000 5.77 0.00 0.00 3.06
388 389 0.963856 TCTAGTCGCGTCCACCACAT 60.964 55.000 5.77 0.00 0.00 3.21
389 390 1.174078 TTCTAGTCGCGTCCACCACA 61.174 55.000 5.77 0.00 0.00 4.17
390 391 0.456312 CTTCTAGTCGCGTCCACCAC 60.456 60.000 5.77 0.00 0.00 4.16
391 392 0.892358 ACTTCTAGTCGCGTCCACCA 60.892 55.000 5.77 0.00 0.00 4.17
392 393 0.179169 GACTTCTAGTCGCGTCCACC 60.179 60.000 5.77 0.00 35.28 4.61
393 394 0.179169 GGACTTCTAGTCGCGTCCAC 60.179 60.000 5.77 0.00 45.96 4.02
394 395 1.310933 GGGACTTCTAGTCGCGTCCA 61.311 60.000 5.77 0.00 45.91 4.02
395 396 1.432657 GGGACTTCTAGTCGCGTCC 59.567 63.158 5.77 2.26 45.91 4.79
400 401 1.962100 GGGTATGGGGACTTCTAGTCG 59.038 57.143 1.12 0.00 45.96 4.18
401 402 1.962100 CGGGTATGGGGACTTCTAGTC 59.038 57.143 0.00 0.00 44.32 2.59
402 403 2.033208 GCGGGTATGGGGACTTCTAGT 61.033 57.143 0.00 0.00 0.00 2.57
403 404 0.680061 GCGGGTATGGGGACTTCTAG 59.320 60.000 0.00 0.00 0.00 2.43
404 405 0.761702 GGCGGGTATGGGGACTTCTA 60.762 60.000 0.00 0.00 0.00 2.10
405 406 2.070650 GGCGGGTATGGGGACTTCT 61.071 63.158 0.00 0.00 0.00 2.85
406 407 2.509422 GGCGGGTATGGGGACTTC 59.491 66.667 0.00 0.00 0.00 3.01
407 408 3.094498 GGGCGGGTATGGGGACTT 61.094 66.667 0.00 0.00 0.00 3.01
408 409 3.954740 TTGGGCGGGTATGGGGACT 62.955 63.158 0.00 0.00 0.00 3.85
409 410 2.292785 ATTTGGGCGGGTATGGGGAC 62.293 60.000 0.00 0.00 0.00 4.46
410 411 1.585651 AATTTGGGCGGGTATGGGGA 61.586 55.000 0.00 0.00 0.00 4.81
411 412 0.689412 AAATTTGGGCGGGTATGGGG 60.689 55.000 0.00 0.00 0.00 4.96
412 413 1.684450 GTAAATTTGGGCGGGTATGGG 59.316 52.381 0.00 0.00 0.00 4.00
413 414 1.335496 CGTAAATTTGGGCGGGTATGG 59.665 52.381 0.00 0.00 0.00 2.74
414 415 1.268845 GCGTAAATTTGGGCGGGTATG 60.269 52.381 0.00 0.00 0.00 2.39
415 416 1.026584 GCGTAAATTTGGGCGGGTAT 58.973 50.000 0.00 0.00 0.00 2.73
416 417 1.031029 GGCGTAAATTTGGGCGGGTA 61.031 55.000 0.00 0.00 0.00 3.69
417 418 2.344981 GGCGTAAATTTGGGCGGGT 61.345 57.895 0.00 0.00 0.00 5.28
418 419 2.492560 GGCGTAAATTTGGGCGGG 59.507 61.111 0.00 0.00 0.00 6.13
419 420 2.101380 CGGCGTAAATTTGGGCGG 59.899 61.111 23.30 15.94 44.69 6.13
421 422 1.310904 TATCCGGCGTAAATTTGGGC 58.689 50.000 6.01 3.88 0.00 5.36
422 423 3.142951 TCATATCCGGCGTAAATTTGGG 58.857 45.455 6.01 0.00 0.00 4.12
423 424 3.813166 ACTCATATCCGGCGTAAATTTGG 59.187 43.478 6.01 0.00 0.00 3.28
424 425 5.204833 CAACTCATATCCGGCGTAAATTTG 58.795 41.667 6.01 2.50 0.00 2.32
425 426 4.879545 ACAACTCATATCCGGCGTAAATTT 59.120 37.500 6.01 0.00 0.00 1.82
426 427 4.272504 CACAACTCATATCCGGCGTAAATT 59.727 41.667 6.01 0.00 0.00 1.82
427 428 3.807622 CACAACTCATATCCGGCGTAAAT 59.192 43.478 6.01 0.00 0.00 1.40
428 429 3.191669 CACAACTCATATCCGGCGTAAA 58.808 45.455 6.01 0.00 0.00 2.01
429 430 2.482316 CCACAACTCATATCCGGCGTAA 60.482 50.000 6.01 0.00 0.00 3.18
430 431 1.067974 CCACAACTCATATCCGGCGTA 59.932 52.381 6.01 0.00 0.00 4.42
431 432 0.179084 CCACAACTCATATCCGGCGT 60.179 55.000 6.01 0.00 0.00 5.68
432 433 1.498865 GCCACAACTCATATCCGGCG 61.499 60.000 0.00 0.00 0.00 6.46
433 434 0.179045 AGCCACAACTCATATCCGGC 60.179 55.000 0.00 0.00 38.36 6.13
434 435 1.138859 TCAGCCACAACTCATATCCGG 59.861 52.381 0.00 0.00 0.00 5.14
435 436 2.477825 CTCAGCCACAACTCATATCCG 58.522 52.381 0.00 0.00 0.00 4.18
436 437 2.158842 AGCTCAGCCACAACTCATATCC 60.159 50.000 0.00 0.00 0.00 2.59
437 438 3.191078 AGCTCAGCCACAACTCATATC 57.809 47.619 0.00 0.00 0.00 1.63
438 439 4.970860 ATAGCTCAGCCACAACTCATAT 57.029 40.909 0.00 0.00 0.00 1.78
439 440 4.895889 ACTATAGCTCAGCCACAACTCATA 59.104 41.667 0.00 0.00 0.00 2.15
440 441 3.708631 ACTATAGCTCAGCCACAACTCAT 59.291 43.478 0.00 0.00 0.00 2.90
441 442 3.099905 ACTATAGCTCAGCCACAACTCA 58.900 45.455 0.00 0.00 0.00 3.41
442 443 3.131223 TGACTATAGCTCAGCCACAACTC 59.869 47.826 0.00 0.00 0.00 3.01
443 444 3.099905 TGACTATAGCTCAGCCACAACT 58.900 45.455 0.00 0.00 0.00 3.16
444 445 3.526931 TGACTATAGCTCAGCCACAAC 57.473 47.619 0.00 0.00 0.00 3.32
445 446 4.760530 AATGACTATAGCTCAGCCACAA 57.239 40.909 0.00 0.00 0.00 3.33
446 447 4.760530 AAATGACTATAGCTCAGCCACA 57.239 40.909 0.00 0.00 0.00 4.17
447 448 6.589523 CAGATAAATGACTATAGCTCAGCCAC 59.410 42.308 0.00 0.00 0.00 5.01
448 449 6.295518 CCAGATAAATGACTATAGCTCAGCCA 60.296 42.308 0.00 0.00 0.00 4.75
449 450 6.105333 CCAGATAAATGACTATAGCTCAGCC 58.895 44.000 0.00 0.00 0.00 4.85
450 451 6.105333 CCCAGATAAATGACTATAGCTCAGC 58.895 44.000 0.00 0.00 0.00 4.26
451 452 7.095910 CACCCAGATAAATGACTATAGCTCAG 58.904 42.308 0.00 0.00 0.00 3.35
452 453 6.014242 CCACCCAGATAAATGACTATAGCTCA 60.014 42.308 0.00 3.74 0.00 4.26
453 454 6.402222 CCACCCAGATAAATGACTATAGCTC 58.598 44.000 0.00 0.00 0.00 4.09
454 455 5.249393 CCCACCCAGATAAATGACTATAGCT 59.751 44.000 0.00 0.00 0.00 3.32
455 456 5.491982 CCCACCCAGATAAATGACTATAGC 58.508 45.833 0.00 0.00 0.00 2.97
456 457 5.491982 GCCCACCCAGATAAATGACTATAG 58.508 45.833 0.00 0.00 0.00 1.31
457 458 4.288626 GGCCCACCCAGATAAATGACTATA 59.711 45.833 0.00 0.00 0.00 1.31
458 459 3.074538 GGCCCACCCAGATAAATGACTAT 59.925 47.826 0.00 0.00 0.00 2.12
459 460 2.441750 GGCCCACCCAGATAAATGACTA 59.558 50.000 0.00 0.00 0.00 2.59
460 461 1.215423 GGCCCACCCAGATAAATGACT 59.785 52.381 0.00 0.00 0.00 3.41
461 462 1.064017 TGGCCCACCCAGATAAATGAC 60.064 52.381 0.00 0.00 39.18 3.06
462 463 1.303898 TGGCCCACCCAGATAAATGA 58.696 50.000 0.00 0.00 39.18 2.57
463 464 2.157640 TTGGCCCACCCAGATAAATG 57.842 50.000 0.00 0.00 46.39 2.32
464 465 2.837591 GTTTTGGCCCACCCAGATAAAT 59.162 45.455 0.00 0.00 46.39 1.40
465 466 2.252714 GTTTTGGCCCACCCAGATAAA 58.747 47.619 0.00 0.00 46.39 1.40
466 467 1.148027 TGTTTTGGCCCACCCAGATAA 59.852 47.619 0.00 0.00 46.39 1.75
467 468 0.780637 TGTTTTGGCCCACCCAGATA 59.219 50.000 0.00 0.00 46.39 1.98
468 469 0.105246 TTGTTTTGGCCCACCCAGAT 60.105 50.000 0.00 0.00 46.39 2.90
469 470 0.325671 TTTGTTTTGGCCCACCCAGA 60.326 50.000 0.00 0.00 46.39 3.86
470 471 0.543749 TTTTGTTTTGGCCCACCCAG 59.456 50.000 0.00 0.00 46.39 4.45
471 472 0.991920 TTTTTGTTTTGGCCCACCCA 59.008 45.000 0.00 0.00 43.51 4.51
472 473 2.158682 AGATTTTTGTTTTGGCCCACCC 60.159 45.455 0.00 0.00 33.59 4.61
473 474 3.207265 AGATTTTTGTTTTGGCCCACC 57.793 42.857 0.00 0.00 0.00 4.61
474 475 3.944650 ACAAGATTTTTGTTTTGGCCCAC 59.055 39.130 0.00 0.00 0.00 4.61
475 476 3.944015 CACAAGATTTTTGTTTTGGCCCA 59.056 39.130 0.00 0.00 0.00 5.36
476 477 3.243035 GCACAAGATTTTTGTTTTGGCCC 60.243 43.478 0.00 0.00 0.00 5.80
477 478 3.376546 TGCACAAGATTTTTGTTTTGGCC 59.623 39.130 0.00 0.00 0.00 5.36
478 479 4.590226 CTGCACAAGATTTTTGTTTTGGC 58.410 39.130 0.00 0.00 0.00 4.52
479 480 4.333372 AGCTGCACAAGATTTTTGTTTTGG 59.667 37.500 1.02 0.00 0.00 3.28
480 481 5.260140 CAGCTGCACAAGATTTTTGTTTTG 58.740 37.500 0.00 0.00 0.00 2.44
481 482 4.333372 CCAGCTGCACAAGATTTTTGTTTT 59.667 37.500 8.66 0.00 0.00 2.43
482 483 3.872771 CCAGCTGCACAAGATTTTTGTTT 59.127 39.130 8.66 0.00 0.00 2.83
483 484 3.460103 CCAGCTGCACAAGATTTTTGTT 58.540 40.909 8.66 0.00 0.00 2.83
484 485 2.224113 CCCAGCTGCACAAGATTTTTGT 60.224 45.455 8.66 0.00 0.00 2.83
485 486 2.409975 CCCAGCTGCACAAGATTTTTG 58.590 47.619 8.66 0.00 0.00 2.44
486 487 1.270465 GCCCAGCTGCACAAGATTTTT 60.270 47.619 8.66 0.00 0.00 1.94
487 488 0.319405 GCCCAGCTGCACAAGATTTT 59.681 50.000 8.66 0.00 0.00 1.82
488 489 1.538687 GGCCCAGCTGCACAAGATTT 61.539 55.000 8.66 0.00 0.00 2.17
489 490 1.980772 GGCCCAGCTGCACAAGATT 60.981 57.895 8.66 0.00 0.00 2.40
490 491 2.362120 GGCCCAGCTGCACAAGAT 60.362 61.111 8.66 0.00 0.00 2.40
491 492 3.573229 AGGCCCAGCTGCACAAGA 61.573 61.111 8.66 0.00 0.00 3.02
492 493 3.371063 CAGGCCCAGCTGCACAAG 61.371 66.667 8.66 0.00 0.00 3.16
493 494 4.980702 CCAGGCCCAGCTGCACAA 62.981 66.667 8.66 0.00 0.00 3.33
531 532 2.422165 GCGGAGTTAGGGCTAGGC 59.578 66.667 8.00 8.00 0.00 3.93
532 533 1.760875 TGGCGGAGTTAGGGCTAGG 60.761 63.158 0.00 0.00 0.00 3.02
533 534 1.043673 AGTGGCGGAGTTAGGGCTAG 61.044 60.000 0.00 0.00 0.00 3.42
534 535 1.001248 AGTGGCGGAGTTAGGGCTA 59.999 57.895 0.00 0.00 0.00 3.93
535 536 2.284699 AGTGGCGGAGTTAGGGCT 60.285 61.111 0.00 0.00 0.00 5.19
536 537 2.125106 CAGTGGCGGAGTTAGGGC 60.125 66.667 0.00 0.00 0.00 5.19
537 538 1.338136 ATCCAGTGGCGGAGTTAGGG 61.338 60.000 3.51 0.00 38.83 3.53
538 539 0.105039 GATCCAGTGGCGGAGTTAGG 59.895 60.000 3.51 0.00 38.83 2.69
539 540 1.115467 AGATCCAGTGGCGGAGTTAG 58.885 55.000 3.51 0.00 38.83 2.34
540 541 1.568504 AAGATCCAGTGGCGGAGTTA 58.431 50.000 3.51 0.00 38.83 2.24
541 542 0.693049 AAAGATCCAGTGGCGGAGTT 59.307 50.000 3.51 0.00 38.83 3.01
542 543 1.482593 CTAAAGATCCAGTGGCGGAGT 59.517 52.381 3.51 0.00 38.83 3.85
543 544 1.202580 CCTAAAGATCCAGTGGCGGAG 60.203 57.143 3.51 0.00 38.83 4.63
544 545 0.830648 CCTAAAGATCCAGTGGCGGA 59.169 55.000 3.51 0.00 40.07 5.54
545 546 0.541863 ACCTAAAGATCCAGTGGCGG 59.458 55.000 3.51 0.00 0.00 6.13
546 547 1.802880 CGACCTAAAGATCCAGTGGCG 60.803 57.143 3.51 0.00 0.00 5.69
547 548 1.473434 CCGACCTAAAGATCCAGTGGC 60.473 57.143 3.51 0.00 0.00 5.01
548 549 1.831736 ACCGACCTAAAGATCCAGTGG 59.168 52.381 1.40 1.40 0.00 4.00
549 550 4.341235 TCATACCGACCTAAAGATCCAGTG 59.659 45.833 0.00 0.00 0.00 3.66
550 551 4.543689 TCATACCGACCTAAAGATCCAGT 58.456 43.478 0.00 0.00 0.00 4.00
551 552 4.021894 CCTCATACCGACCTAAAGATCCAG 60.022 50.000 0.00 0.00 0.00 3.86
552 553 3.895656 CCTCATACCGACCTAAAGATCCA 59.104 47.826 0.00 0.00 0.00 3.41
553 554 4.150359 TCCTCATACCGACCTAAAGATCC 58.850 47.826 0.00 0.00 0.00 3.36
554 555 4.321378 GCTCCTCATACCGACCTAAAGATC 60.321 50.000 0.00 0.00 0.00 2.75
555 556 3.574826 GCTCCTCATACCGACCTAAAGAT 59.425 47.826 0.00 0.00 0.00 2.40
556 557 2.957006 GCTCCTCATACCGACCTAAAGA 59.043 50.000 0.00 0.00 0.00 2.52
557 558 2.036089 GGCTCCTCATACCGACCTAAAG 59.964 54.545 0.00 0.00 0.00 1.85
558 559 2.037144 GGCTCCTCATACCGACCTAAA 58.963 52.381 0.00 0.00 0.00 1.85
559 560 1.217183 AGGCTCCTCATACCGACCTAA 59.783 52.381 0.00 0.00 0.00 2.69
560 561 0.851469 AGGCTCCTCATACCGACCTA 59.149 55.000 0.00 0.00 0.00 3.08
561 562 0.468400 GAGGCTCCTCATACCGACCT 60.468 60.000 10.90 0.00 42.31 3.85
562 563 0.468400 AGAGGCTCCTCATACCGACC 60.468 60.000 17.40 0.00 44.99 4.79
563 564 0.955905 GAGAGGCTCCTCATACCGAC 59.044 60.000 17.40 0.00 44.99 4.79
564 565 0.847373 AGAGAGGCTCCTCATACCGA 59.153 55.000 17.40 0.00 44.99 4.69
565 566 0.958091 CAGAGAGGCTCCTCATACCG 59.042 60.000 17.40 0.00 44.99 4.02
566 567 1.686052 CACAGAGAGGCTCCTCATACC 59.314 57.143 17.40 4.57 44.99 2.73
567 568 2.360801 GACACAGAGAGGCTCCTCATAC 59.639 54.545 17.40 8.67 44.99 2.39
568 569 2.243478 AGACACAGAGAGGCTCCTCATA 59.757 50.000 17.40 0.00 44.99 2.15
569 570 1.006998 AGACACAGAGAGGCTCCTCAT 59.993 52.381 17.40 3.57 44.99 2.90
570 571 0.407528 AGACACAGAGAGGCTCCTCA 59.592 55.000 17.40 0.00 44.99 3.86
571 572 1.555967 AAGACACAGAGAGGCTCCTC 58.444 55.000 11.71 7.84 43.03 3.71
572 573 2.022718 AAAGACACAGAGAGGCTCCT 57.977 50.000 11.71 5.24 0.00 3.69
573 574 2.849294 AAAAGACACAGAGAGGCTCC 57.151 50.000 11.71 2.69 0.00 4.70
603 604 2.362800 GCGTGAACGGTCGTCACTC 61.363 63.158 17.02 10.21 40.23 3.51
695 704 1.078759 GGACGGACGATGCTCTTGTG 61.079 60.000 0.00 0.00 0.00 3.33
743 752 6.655003 TCAAAAGAACCTCGAGCATATCTTTT 59.345 34.615 24.40 24.40 43.85 2.27
829 838 0.575859 CGATGATGAGAGTTGCAGCG 59.424 55.000 0.00 0.00 33.83 5.18
915 927 5.300969 TCATGTGTATCTTTCTTGCTTGC 57.699 39.130 0.00 0.00 0.00 4.01
930 942 1.679944 CCTCCTTGCGGATTCATGTGT 60.680 52.381 0.00 0.00 39.01 3.72
955 967 8.512956 TCTGCTTTTCATATATAGTACGTCCTC 58.487 37.037 0.00 0.00 0.00 3.71
956 968 8.298140 GTCTGCTTTTCATATATAGTACGTCCT 58.702 37.037 0.00 0.00 0.00 3.85
957 969 7.541437 GGTCTGCTTTTCATATATAGTACGTCC 59.459 40.741 0.00 0.00 0.00 4.79
958 970 7.541437 GGGTCTGCTTTTCATATATAGTACGTC 59.459 40.741 0.00 0.00 0.00 4.34
1006 1019 4.731313 ATTATCAATTCAGACCTCCCCC 57.269 45.455 0.00 0.00 0.00 5.40
1007 1020 5.221925 TGCTATTATCAATTCAGACCTCCCC 60.222 44.000 0.00 0.00 0.00 4.81
1008 1021 5.869579 TGCTATTATCAATTCAGACCTCCC 58.130 41.667 0.00 0.00 0.00 4.30
1009 1022 6.763355 TCTGCTATTATCAATTCAGACCTCC 58.237 40.000 0.00 0.00 29.95 4.30
1010 1023 6.873076 CCTCTGCTATTATCAATTCAGACCTC 59.127 42.308 0.00 0.00 30.99 3.85
1011 1024 6.556495 TCCTCTGCTATTATCAATTCAGACCT 59.444 38.462 0.00 0.00 30.99 3.85
1012 1025 6.763355 TCCTCTGCTATTATCAATTCAGACC 58.237 40.000 0.00 0.00 30.99 3.85
1013 1026 8.147058 TCTTCCTCTGCTATTATCAATTCAGAC 58.853 37.037 0.00 0.00 30.99 3.51
1014 1027 8.255111 TCTTCCTCTGCTATTATCAATTCAGA 57.745 34.615 0.00 0.00 32.32 3.27
1015 1028 8.899427 TTCTTCCTCTGCTATTATCAATTCAG 57.101 34.615 0.00 0.00 0.00 3.02
1016 1029 8.708378 TCTTCTTCCTCTGCTATTATCAATTCA 58.292 33.333 0.00 0.00 0.00 2.57
1017 1030 9.553064 TTCTTCTTCCTCTGCTATTATCAATTC 57.447 33.333 0.00 0.00 0.00 2.17
1018 1031 9.336171 GTTCTTCTTCCTCTGCTATTATCAATT 57.664 33.333 0.00 0.00 0.00 2.32
1019 1032 8.713036 AGTTCTTCTTCCTCTGCTATTATCAAT 58.287 33.333 0.00 0.00 0.00 2.57
1020 1033 7.984050 CAGTTCTTCTTCCTCTGCTATTATCAA 59.016 37.037 0.00 0.00 0.00 2.57
1021 1034 7.343057 TCAGTTCTTCTTCCTCTGCTATTATCA 59.657 37.037 0.00 0.00 0.00 2.15
1022 1035 7.721402 TCAGTTCTTCTTCCTCTGCTATTATC 58.279 38.462 0.00 0.00 0.00 1.75
1023 1036 7.667575 TCAGTTCTTCTTCCTCTGCTATTAT 57.332 36.000 0.00 0.00 0.00 1.28
1024 1037 7.179338 ACTTCAGTTCTTCTTCCTCTGCTATTA 59.821 37.037 0.00 0.00 0.00 0.98
1025 1038 6.013812 ACTTCAGTTCTTCTTCCTCTGCTATT 60.014 38.462 0.00 0.00 0.00 1.73
1026 1039 5.483583 ACTTCAGTTCTTCTTCCTCTGCTAT 59.516 40.000 0.00 0.00 0.00 2.97
1027 1040 4.835615 ACTTCAGTTCTTCTTCCTCTGCTA 59.164 41.667 0.00 0.00 0.00 3.49
1028 1041 3.645687 ACTTCAGTTCTTCTTCCTCTGCT 59.354 43.478 0.00 0.00 0.00 4.24
1029 1042 3.993736 GACTTCAGTTCTTCTTCCTCTGC 59.006 47.826 0.00 0.00 0.00 4.26
1030 1043 4.022762 TCGACTTCAGTTCTTCTTCCTCTG 60.023 45.833 0.00 0.00 0.00 3.35
1083 1097 5.972327 AACCAATCTCCTTCAGATCAGAT 57.028 39.130 0.00 0.00 41.47 2.90
1084 1098 5.494724 CAAACCAATCTCCTTCAGATCAGA 58.505 41.667 0.00 0.00 41.47 3.27
1085 1099 4.096081 GCAAACCAATCTCCTTCAGATCAG 59.904 45.833 0.00 0.00 41.47 2.90
1086 1100 4.012374 GCAAACCAATCTCCTTCAGATCA 58.988 43.478 0.00 0.00 41.47 2.92
1087 1101 3.379688 GGCAAACCAATCTCCTTCAGATC 59.620 47.826 0.00 0.00 41.47 2.75
1149 1163 7.489757 GTCATTAGAAGATCACAACCTGAGTAC 59.510 40.741 0.00 0.00 30.20 2.73
1180 1194 0.804989 CGGCATTTCTCCTTGGTCAC 59.195 55.000 0.00 0.00 0.00 3.67
1228 1242 0.465705 ACTCCGACGATGGCATCATT 59.534 50.000 25.88 12.89 32.98 2.57
1229 1243 0.249615 CACTCCGACGATGGCATCAT 60.250 55.000 25.88 12.58 36.09 2.45
1235 1249 2.202797 CAGGCACTCCGACGATGG 60.203 66.667 0.00 0.00 34.60 3.51
1556 1570 4.069232 CGTGAAGGCGCTCCTCCA 62.069 66.667 7.64 0.00 43.40 3.86
1585 1602 0.459585 TAGAAGTTGCCGCCATCGTC 60.460 55.000 0.00 0.00 0.00 4.20
1590 1607 1.263356 AGTAGTAGAAGTTGCCGCCA 58.737 50.000 0.00 0.00 0.00 5.69
1615 1632 0.096976 CCATTGATGCCGACGTTGTC 59.903 55.000 1.30 0.00 0.00 3.18
1617 1634 1.226379 GCCATTGATGCCGACGTTG 60.226 57.895 0.00 0.00 0.00 4.10
1619 1636 2.824041 GGCCATTGATGCCGACGT 60.824 61.111 0.00 0.00 39.48 4.34
1848 1868 1.002888 TCTGCAGAGCCTCAAAGAAGG 59.997 52.381 13.74 0.00 39.62 3.46
1862 1882 6.490877 AAAAATTTACGTCGTTTTCTGCAG 57.509 33.333 7.63 7.63 0.00 4.41
1949 1972 1.580994 GGCATGTACCCCTTCCCCTT 61.581 60.000 0.00 0.00 0.00 3.95
1950 1973 2.006991 GGCATGTACCCCTTCCCCT 61.007 63.158 0.00 0.00 0.00 4.79
1951 1974 2.601299 GGCATGTACCCCTTCCCC 59.399 66.667 0.00 0.00 0.00 4.81
1952 1975 2.192175 CGGCATGTACCCCTTCCC 59.808 66.667 0.00 0.00 0.00 3.97
1953 1976 1.917336 TTCCGGCATGTACCCCTTCC 61.917 60.000 0.00 0.00 0.00 3.46
1999 2045 2.749076 GGTATTCAAACCACGGGTAACC 59.251 50.000 0.00 0.00 46.63 2.85
2000 2046 3.678289 AGGTATTCAAACCACGGGTAAC 58.322 45.455 0.00 0.00 42.40 2.50
2001 2047 3.583966 AGAGGTATTCAAACCACGGGTAA 59.416 43.478 0.00 0.00 42.40 2.85
2002 2048 3.175594 AGAGGTATTCAAACCACGGGTA 58.824 45.455 0.00 0.00 42.40 3.69
2003 2049 1.982958 AGAGGTATTCAAACCACGGGT 59.017 47.619 0.00 0.00 42.40 5.28
2004 2050 2.629051 GAGAGGTATTCAAACCACGGG 58.371 52.381 0.00 0.00 42.40 5.28
2005 2051 2.268298 CGAGAGGTATTCAAACCACGG 58.732 52.381 0.00 0.00 42.40 4.94
2046 2092 2.233654 CCTTCGAGGAGATTGCGCG 61.234 63.158 0.00 0.00 37.67 6.86
2084 2130 4.769688 TCAACGGCATGAGATTGACTTAT 58.230 39.130 0.00 0.00 0.00 1.73
2085 2131 4.200838 TCAACGGCATGAGATTGACTTA 57.799 40.909 0.00 0.00 0.00 2.24
2110 2156 0.879090 GGAAAGGAACCGACGCATTT 59.121 50.000 0.00 0.00 0.00 2.32
2111 2157 0.958876 GGGAAAGGAACCGACGCATT 60.959 55.000 0.00 0.00 0.00 3.56
2112 2158 1.376812 GGGAAAGGAACCGACGCAT 60.377 57.895 0.00 0.00 0.00 4.73
2123 2169 3.084786 GTTGAATGTCTGGAGGGAAAGG 58.915 50.000 0.00 0.00 0.00 3.11
2129 2175 3.077484 ACCATGTTGAATGTCTGGAGG 57.923 47.619 0.00 0.00 0.00 4.30
2130 2176 4.578871 TGTACCATGTTGAATGTCTGGAG 58.421 43.478 0.00 0.00 0.00 3.86
2132 2178 4.578871 TCTGTACCATGTTGAATGTCTGG 58.421 43.478 0.00 0.00 0.00 3.86
2136 2183 5.045651 TCCTCATCTGTACCATGTTGAATGT 60.046 40.000 0.00 0.00 0.00 2.71
2141 2188 5.163311 TGGTATCCTCATCTGTACCATGTTG 60.163 44.000 0.00 0.00 41.08 3.33
2142 2189 4.968719 TGGTATCCTCATCTGTACCATGTT 59.031 41.667 0.00 0.00 41.08 2.71
2148 2195 4.215908 TGGAGTGGTATCCTCATCTGTAC 58.784 47.826 0.00 0.00 40.29 2.90
2150 2197 3.404869 TGGAGTGGTATCCTCATCTGT 57.595 47.619 0.00 0.00 40.29 3.41
2161 2208 2.897969 GAGAGGAAGTGTTGGAGTGGTA 59.102 50.000 0.00 0.00 0.00 3.25
2165 2212 1.974236 CCAGAGAGGAAGTGTTGGAGT 59.026 52.381 0.00 0.00 41.22 3.85
2170 2217 2.104963 GACAACCCAGAGAGGAAGTGTT 59.895 50.000 0.00 0.00 41.22 3.32
2180 2227 4.566004 TCAAAGATAACGACAACCCAGAG 58.434 43.478 0.00 0.00 0.00 3.35
2182 2229 3.125316 GCTCAAAGATAACGACAACCCAG 59.875 47.826 0.00 0.00 0.00 4.45
2216 2267 2.342406 TCCCCTCAATTGACTCCTGA 57.658 50.000 3.38 0.00 0.00 3.86
2239 2290 3.697747 CCGTTGGTCCCGTGGCTA 61.698 66.667 0.00 0.00 0.00 3.93
2497 2548 4.345837 AGCATGAAATATGATTGTTGGGGG 59.654 41.667 0.00 0.00 0.00 5.40
2498 2549 5.303589 AGAGCATGAAATATGATTGTTGGGG 59.696 40.000 0.00 0.00 0.00 4.96
2499 2550 6.213677 CAGAGCATGAAATATGATTGTTGGG 58.786 40.000 0.00 0.00 0.00 4.12
2500 2551 5.690409 GCAGAGCATGAAATATGATTGTTGG 59.310 40.000 0.00 0.00 0.00 3.77
2501 2552 5.690409 GGCAGAGCATGAAATATGATTGTTG 59.310 40.000 0.00 0.00 0.00 3.33
2502 2553 5.221382 GGGCAGAGCATGAAATATGATTGTT 60.221 40.000 0.00 0.00 0.00 2.83
2503 2554 4.280174 GGGCAGAGCATGAAATATGATTGT 59.720 41.667 0.00 0.00 0.00 2.71
2504 2555 4.321750 GGGGCAGAGCATGAAATATGATTG 60.322 45.833 0.00 0.00 0.00 2.67
2505 2556 3.830755 GGGGCAGAGCATGAAATATGATT 59.169 43.478 0.00 0.00 0.00 2.57
2506 2557 3.428532 GGGGCAGAGCATGAAATATGAT 58.571 45.455 0.00 0.00 0.00 2.45
2507 2558 2.489619 GGGGGCAGAGCATGAAATATGA 60.490 50.000 0.00 0.00 0.00 2.15
2508 2559 1.891150 GGGGGCAGAGCATGAAATATG 59.109 52.381 0.00 0.00 0.00 1.78
2509 2560 1.785208 AGGGGGCAGAGCATGAAATAT 59.215 47.619 0.00 0.00 0.00 1.28
2510 2561 1.133699 CAGGGGGCAGAGCATGAAATA 60.134 52.381 0.00 0.00 0.00 1.40
2511 2562 0.396695 CAGGGGGCAGAGCATGAAAT 60.397 55.000 0.00 0.00 0.00 2.17
2512 2563 1.000521 CAGGGGGCAGAGCATGAAA 60.001 57.895 0.00 0.00 0.00 2.69
2513 2564 2.679092 CAGGGGGCAGAGCATGAA 59.321 61.111 0.00 0.00 0.00 2.57
2514 2565 4.119363 GCAGGGGGCAGAGCATGA 62.119 66.667 0.00 0.00 43.97 3.07
2523 2574 2.123982 CAGAGAATGGCAGGGGGC 60.124 66.667 0.00 0.00 43.74 5.80
2524 2575 1.348008 TAGCAGAGAATGGCAGGGGG 61.348 60.000 0.00 0.00 0.00 5.40
2525 2576 0.108207 CTAGCAGAGAATGGCAGGGG 59.892 60.000 0.00 0.00 0.00 4.79
2526 2577 0.534652 GCTAGCAGAGAATGGCAGGG 60.535 60.000 10.63 0.00 0.00 4.45
2527 2578 0.469070 AGCTAGCAGAGAATGGCAGG 59.531 55.000 18.83 0.00 0.00 4.85
2528 2579 1.540797 GGAGCTAGCAGAGAATGGCAG 60.541 57.143 18.83 0.00 0.00 4.85
2529 2580 0.467384 GGAGCTAGCAGAGAATGGCA 59.533 55.000 18.83 0.00 0.00 4.92
2530 2581 0.599728 CGGAGCTAGCAGAGAATGGC 60.600 60.000 18.83 0.00 0.00 4.40
2531 2582 3.584586 CGGAGCTAGCAGAGAATGG 57.415 57.895 18.83 0.00 0.00 3.16
2545 2596 1.136984 GTCTCGTACAGTGGCGGAG 59.863 63.158 9.00 5.20 0.00 4.63
2546 2597 0.036105 TAGTCTCGTACAGTGGCGGA 60.036 55.000 9.00 3.89 0.00 5.54
2547 2598 0.806868 TTAGTCTCGTACAGTGGCGG 59.193 55.000 9.00 1.96 0.00 6.13
2548 2599 2.451132 CATTAGTCTCGTACAGTGGCG 58.549 52.381 0.00 0.00 0.00 5.69
2549 2600 2.165845 ACCATTAGTCTCGTACAGTGGC 59.834 50.000 0.00 0.00 32.44 5.01
2550 2601 4.174009 CAACCATTAGTCTCGTACAGTGG 58.826 47.826 0.00 0.00 34.27 4.00
2551 2602 4.174009 CCAACCATTAGTCTCGTACAGTG 58.826 47.826 0.00 0.00 0.00 3.66
2552 2603 3.368116 GCCAACCATTAGTCTCGTACAGT 60.368 47.826 0.00 0.00 0.00 3.55
2553 2604 3.119101 AGCCAACCATTAGTCTCGTACAG 60.119 47.826 0.00 0.00 0.00 2.74
2554 2605 2.829720 AGCCAACCATTAGTCTCGTACA 59.170 45.455 0.00 0.00 0.00 2.90
2555 2606 3.521947 AGCCAACCATTAGTCTCGTAC 57.478 47.619 0.00 0.00 0.00 3.67
2556 2607 4.275810 ACTAGCCAACCATTAGTCTCGTA 58.724 43.478 0.00 0.00 0.00 3.43
2557 2608 3.097614 ACTAGCCAACCATTAGTCTCGT 58.902 45.455 0.00 0.00 0.00 4.18
2558 2609 3.707793 GACTAGCCAACCATTAGTCTCG 58.292 50.000 4.17 0.00 39.93 4.04
2559 2610 3.130693 ACGACTAGCCAACCATTAGTCTC 59.869 47.826 8.66 0.00 40.56 3.36
2560 2611 3.097614 ACGACTAGCCAACCATTAGTCT 58.902 45.455 8.66 0.00 40.56 3.24
2561 2612 3.119245 TGACGACTAGCCAACCATTAGTC 60.119 47.826 0.00 1.75 39.76 2.59
2562 2613 2.829720 TGACGACTAGCCAACCATTAGT 59.170 45.455 0.00 0.00 0.00 2.24
2563 2614 3.520290 TGACGACTAGCCAACCATTAG 57.480 47.619 0.00 0.00 0.00 1.73
2564 2615 3.965379 TTGACGACTAGCCAACCATTA 57.035 42.857 0.00 0.00 0.00 1.90
2565 2616 2.851263 TTGACGACTAGCCAACCATT 57.149 45.000 0.00 0.00 0.00 3.16
2566 2617 2.420129 GGATTGACGACTAGCCAACCAT 60.420 50.000 0.00 0.00 0.00 3.55
2567 2618 1.066430 GGATTGACGACTAGCCAACCA 60.066 52.381 0.00 0.00 0.00 3.67
2576 2627 0.108424 GCTCAGCTGGATTGACGACT 60.108 55.000 15.13 0.00 0.00 4.18
2580 2631 0.321919 TGGTGCTCAGCTGGATTGAC 60.322 55.000 15.13 3.95 0.00 3.18
2583 2634 1.302285 CCTGGTGCTCAGCTGGATT 59.698 57.895 15.13 0.00 46.63 3.01
2585 2636 4.025858 GCCTGGTGCTCAGCTGGA 62.026 66.667 23.19 0.00 46.63 3.86
2606 2657 0.606604 CCCTTTCATTGCAGCAGCTT 59.393 50.000 1.76 0.00 42.74 3.74
2607 2658 1.885163 GCCCTTTCATTGCAGCAGCT 61.885 55.000 1.76 0.00 42.74 4.24
2614 2665 2.036346 ACAAAGACTGCCCTTTCATTGC 59.964 45.455 0.00 0.00 34.41 3.56
2615 2666 4.761739 TCTACAAAGACTGCCCTTTCATTG 59.238 41.667 0.00 0.00 34.41 2.82
2617 2668 4.566488 CCTCTACAAAGACTGCCCTTTCAT 60.566 45.833 0.00 0.00 34.41 2.57
2635 2686 3.698539 CTCAAGACTGCATCTCACCTCTA 59.301 47.826 0.00 0.00 36.27 2.43
2664 2715 1.155042 CTGTCTGCCAGCTTTGTCTC 58.845 55.000 0.00 0.00 33.59 3.36
2668 2719 0.036732 TACCCTGTCTGCCAGCTTTG 59.963 55.000 0.00 0.00 40.06 2.77
2701 2752 1.523258 CTGATCGCCTTGCCAGGAG 60.523 63.158 8.31 4.32 44.19 3.69
2720 2771 3.384789 CCTTCATAACAGGATCCTCACGA 59.615 47.826 12.69 1.38 32.41 4.35
2731 2782 3.849911 TCTCGCTTGTCCTTCATAACAG 58.150 45.455 0.00 0.00 0.00 3.16
2744 2795 4.926238 AGTGTAGATTGTTCTTCTCGCTTG 59.074 41.667 0.00 0.00 33.17 4.01
2745 2796 5.140747 AGTGTAGATTGTTCTTCTCGCTT 57.859 39.130 0.00 0.00 33.17 4.68
2746 2797 4.792521 AGTGTAGATTGTTCTTCTCGCT 57.207 40.909 0.00 0.00 33.17 4.93
2749 2800 5.703130 AGCCAAAGTGTAGATTGTTCTTCTC 59.297 40.000 0.00 0.00 33.17 2.87
2781 2832 1.535462 ACCGACAAAATCTGGAAAGCG 59.465 47.619 0.00 0.00 0.00 4.68
2784 2835 3.064207 CTCGACCGACAAAATCTGGAAA 58.936 45.455 0.00 0.00 0.00 3.13
2788 2839 3.834610 AGTACTCGACCGACAAAATCTG 58.165 45.455 0.00 0.00 0.00 2.90
2802 2853 0.924090 GCTCGCATCCAAAGTACTCG 59.076 55.000 0.00 0.00 0.00 4.18
2806 2857 0.546122 ATGGGCTCGCATCCAAAGTA 59.454 50.000 0.00 0.00 36.54 2.24
2811 2862 0.106569 AAATCATGGGCTCGCATCCA 60.107 50.000 0.00 0.00 37.46 3.41
2812 2863 0.313043 CAAATCATGGGCTCGCATCC 59.687 55.000 0.00 0.00 0.00 3.51
2835 2886 1.894466 TCGTCCAATTCGACCTACCAA 59.106 47.619 0.00 0.00 32.30 3.67
2843 2894 2.101917 GGGGAATACTCGTCCAATTCGA 59.898 50.000 0.00 0.00 36.83 3.71
2845 2896 3.118371 AGTGGGGAATACTCGTCCAATTC 60.118 47.826 0.00 0.00 36.83 2.17
2848 2899 1.946984 AGTGGGGAATACTCGTCCAA 58.053 50.000 0.00 0.00 36.83 3.53
2850 2901 2.629051 CAAAGTGGGGAATACTCGTCC 58.371 52.381 0.00 0.00 0.00 4.79
2871 2922 3.450457 ACTTCATCTCCTGGATCTGTCAC 59.550 47.826 0.00 0.00 31.27 3.67
2890 2941 2.976882 TGTACCCACTTAAGCAGGACTT 59.023 45.455 16.30 4.23 42.76 3.01
2898 2949 3.306780 CCACCACTCTGTACCCACTTAAG 60.307 52.174 0.00 0.00 0.00 1.85
2899 2950 2.635915 CCACCACTCTGTACCCACTTAA 59.364 50.000 0.00 0.00 0.00 1.85
2916 2967 3.418684 ACAACTATTGTCACCTCCACC 57.581 47.619 0.00 0.00 40.56 4.61
2942 2993 1.479709 CCAAATGCGGGGGTTCATTA 58.520 50.000 0.00 0.00 33.05 1.90
2975 3026 2.827383 GATCAGATCGGCGGCTAGGC 62.827 65.000 7.21 6.15 42.76 3.93


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.