Multiple sequence alignment - TraesCS5D01G049900

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G049900 chr5D 100.000 3788 0 0 1 3788 47334654 47330867 0.000000e+00 6996.0
1 TraesCS5D01G049900 chr5D 88.352 1657 160 13 661 2301 36177922 36179561 0.000000e+00 1960.0
2 TraesCS5D01G049900 chr5D 88.000 550 50 11 3250 3788 224086386 224085842 1.480000e-178 636.0
3 TraesCS5D01G049900 chr5D 92.602 392 29 0 2403 2794 36179580 36179971 7.100000e-157 564.0
4 TraesCS5D01G049900 chr5D 93.539 356 21 2 6 360 450616478 450616832 2.590000e-146 529.0
5 TraesCS5D01G049900 chr5D 84.878 205 24 5 3251 3452 17781509 17781709 2.310000e-47 200.0
6 TraesCS5D01G049900 chr5D 84.024 169 25 2 3020 3187 538664369 538664536 1.090000e-35 161.0
7 TraesCS5D01G049900 chr5D 85.000 160 20 4 3030 3186 512215670 512215828 3.920000e-35 159.0
8 TraesCS5D01G049900 chr5D 91.667 48 3 1 2856 2903 322958615 322958569 8.780000e-07 65.8
9 TraesCS5D01G049900 chr5B 97.870 2723 36 7 534 3235 50471005 50468284 0.000000e+00 4687.0
10 TraesCS5D01G049900 chr5B 87.038 1705 169 22 628 2301 27134101 27135784 0.000000e+00 1877.0
11 TraesCS5D01G049900 chr5B 89.135 1353 133 11 972 2312 26949833 26948483 0.000000e+00 1672.0
12 TraesCS5D01G049900 chr5B 87.835 559 49 12 3241 3788 247230860 247231410 4.130000e-179 638.0
13 TraesCS5D01G049900 chr5B 91.731 387 32 0 2403 2789 27135803 27136189 4.310000e-149 538.0
14 TraesCS5D01G049900 chr5B 86.453 406 55 0 2407 2812 26948475 26948070 2.680000e-121 446.0
15 TraesCS5D01G049900 chr5B 92.050 239 19 0 3541 3779 615375499 615375737 1.690000e-88 337.0
16 TraesCS5D01G049900 chr5B 76.692 133 24 6 1550 1680 704320936 704320809 2.440000e-07 67.6
17 TraesCS5D01G049900 chr5A 88.839 1111 116 6 1208 2312 25118901 25120009 0.000000e+00 1358.0
18 TraesCS5D01G049900 chr5A 84.095 591 60 22 629 1215 25118167 25118727 1.200000e-149 540.0
19 TraesCS5D01G049900 chr5A 90.339 383 36 1 2431 2813 25071819 25072200 5.650000e-138 501.0
20 TraesCS5D01G049900 chr5A 85.995 407 57 0 2407 2813 25120017 25120423 1.620000e-118 436.0
21 TraesCS5D01G049900 chr5A 85.603 257 37 0 1292 1548 25003743 25003999 1.730000e-68 270.0
22 TraesCS5D01G049900 chr5A 85.714 161 20 3 3029 3187 683340953 683341112 2.340000e-37 167.0
23 TraesCS5D01G049900 chr5A 87.234 94 11 1 2319 2412 383880551 383880459 5.170000e-19 106.0
24 TraesCS5D01G049900 chr5A 91.667 48 3 1 2856 2903 419685313 419685267 8.780000e-07 65.8
25 TraesCS5D01G049900 chr5A 91.304 46 4 0 2856 2901 439862741 439862696 3.160000e-06 63.9
26 TraesCS5D01G049900 chr4D 88.619 536 52 6 3259 3788 370055387 370055919 0.000000e+00 643.0
27 TraesCS5D01G049900 chr3A 85.533 553 54 18 3250 3780 469500678 469501226 4.280000e-154 555.0
28 TraesCS5D01G049900 chr3A 83.877 521 61 18 3275 3774 455720371 455720889 3.420000e-130 475.0
29 TraesCS5D01G049900 chr3A 95.238 42 2 0 2856 2897 459861655 459861614 2.440000e-07 67.6
30 TraesCS5D01G049900 chr1A 85.125 558 58 16 3241 3780 95532047 95532597 7.150000e-152 547.0
31 TraesCS5D01G049900 chr1D 93.889 360 22 0 1 360 425235113 425235472 9.250000e-151 544.0
32 TraesCS5D01G049900 chr1D 84.211 171 25 1 3030 3198 6539294 6539464 8.420000e-37 165.0
33 TraesCS5D01G049900 chrUn 93.611 360 23 0 1 360 384562687 384563046 4.310000e-149 538.0
34 TraesCS5D01G049900 chrUn 92.877 365 23 3 1 363 108959499 108959136 9.320000e-146 527.0
35 TraesCS5D01G049900 chrUn 93.094 362 22 3 1 360 335716852 335717212 9.320000e-146 527.0
36 TraesCS5D01G049900 chrUn 84.470 528 51 17 3262 3779 101578083 101577577 3.400000e-135 492.0
37 TraesCS5D01G049900 chrUn 84.116 277 24 14 3241 3504 101400350 101400619 2.260000e-62 250.0
38 TraesCS5D01G049900 chr2D 93.407 364 22 2 1 363 450874919 450875281 4.310000e-149 538.0
39 TraesCS5D01G049900 chr2D 92.837 363 24 2 1 361 565133036 565133398 3.350000e-145 525.0
40 TraesCS5D01G049900 chr2D 92.412 369 24 4 1 367 564925244 564925610 1.210000e-144 523.0
41 TraesCS5D01G049900 chr2D 87.234 188 18 5 3250 3433 263479726 263479911 3.830000e-50 209.0
42 TraesCS5D01G049900 chr2D 89.109 101 9 2 2314 2412 555730187 555730287 1.430000e-24 124.0
43 TraesCS5D01G049900 chr2D 91.489 47 2 2 2852 2897 242076861 242076906 3.160000e-06 63.9
44 TraesCS5D01G049900 chr4A 91.777 377 29 2 1 375 743327499 743327123 1.210000e-144 523.0
45 TraesCS5D01G049900 chr4A 85.000 100 14 1 2313 2411 296251455 296251356 2.410000e-17 100.0
46 TraesCS5D01G049900 chr4A 78.195 133 22 6 1550 1680 610817559 610817432 1.130000e-10 78.7
47 TraesCS5D01G049900 chr4A 91.489 47 2 2 2852 2897 257758424 257758379 3.160000e-06 63.9
48 TraesCS5D01G049900 chr4A 87.500 48 5 1 1550 1597 611281275 611281229 2.000000e-03 54.7
49 TraesCS5D01G049900 chr6B 84.787 539 58 21 3251 3776 62820705 62821232 1.560000e-143 520.0
50 TraesCS5D01G049900 chr6B 82.793 401 50 14 3330 3716 633586651 633587046 1.300000e-89 340.0
51 TraesCS5D01G049900 chr6B 90.588 85 7 1 2320 2404 23637496 23637579 1.110000e-20 111.0
52 TraesCS5D01G049900 chr7D 84.164 562 49 25 3251 3780 595502531 595501978 3.380000e-140 508.0
53 TraesCS5D01G049900 chr1B 81.930 570 60 22 3250 3779 242728453 242727887 3.470000e-120 442.0
54 TraesCS5D01G049900 chr1B 100.000 37 0 0 2856 2892 22665350 22665386 6.790000e-08 69.4
55 TraesCS5D01G049900 chr1B 100.000 37 0 0 2856 2892 606697276 606697312 6.790000e-08 69.4
56 TraesCS5D01G049900 chr7B 75.078 963 212 24 1347 2292 674199540 674198589 1.260000e-114 424.0
57 TraesCS5D01G049900 chr7B 92.857 238 17 0 3544 3781 149632338 149632575 2.800000e-91 346.0
58 TraesCS5D01G049900 chr7B 87.654 162 18 1 3028 3187 382331927 382332088 1.800000e-43 187.0
59 TraesCS5D01G049900 chr7B 83.929 168 22 3 3028 3192 613187152 613186987 5.070000e-34 156.0
60 TraesCS5D01G049900 chr3D 87.615 218 18 8 3241 3452 53620323 53620537 1.050000e-60 244.0
61 TraesCS5D01G049900 chr6D 84.974 193 25 4 3250 3440 205268305 205268115 3.860000e-45 193.0
62 TraesCS5D01G049900 chr6A 85.965 171 19 3 3020 3187 609592941 609593109 1.080000e-40 178.0
63 TraesCS5D01G049900 chr2B 77.177 333 49 16 3250 3559 687201501 687201173 6.510000e-38 169.0
64 TraesCS5D01G049900 chr7A 83.152 184 19 9 3023 3199 41424517 41424695 1.410000e-34 158.0
65 TraesCS5D01G049900 chr7A 91.011 89 7 1 2321 2409 232745369 232745456 6.650000e-23 119.0
66 TraesCS5D01G049900 chr3B 89.691 97 10 0 2320 2416 113517572 113517668 1.430000e-24 124.0
67 TraesCS5D01G049900 chr2A 90.476 84 8 0 2322 2405 1378702 1378619 1.110000e-20 111.0
68 TraesCS5D01G049900 chr2A 88.889 90 9 1 2320 2408 593655995 593655906 4.000000e-20 110.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G049900 chr5D 47330867 47334654 3787 True 6996.0 6996 100.000000 1 3788 1 chr5D.!!$R1 3787
1 TraesCS5D01G049900 chr5D 36177922 36179971 2049 False 1262.0 1960 90.477000 661 2794 2 chr5D.!!$F5 2133
2 TraesCS5D01G049900 chr5D 224085842 224086386 544 True 636.0 636 88.000000 3250 3788 1 chr5D.!!$R2 538
3 TraesCS5D01G049900 chr5B 50468284 50471005 2721 True 4687.0 4687 97.870000 534 3235 1 chr5B.!!$R1 2701
4 TraesCS5D01G049900 chr5B 27134101 27136189 2088 False 1207.5 1877 89.384500 628 2789 2 chr5B.!!$F3 2161
5 TraesCS5D01G049900 chr5B 26948070 26949833 1763 True 1059.0 1672 87.794000 972 2812 2 chr5B.!!$R3 1840
6 TraesCS5D01G049900 chr5B 247230860 247231410 550 False 638.0 638 87.835000 3241 3788 1 chr5B.!!$F1 547
7 TraesCS5D01G049900 chr5A 25118167 25120423 2256 False 778.0 1358 86.309667 629 2813 3 chr5A.!!$F4 2184
8 TraesCS5D01G049900 chr4D 370055387 370055919 532 False 643.0 643 88.619000 3259 3788 1 chr4D.!!$F1 529
9 TraesCS5D01G049900 chr3A 469500678 469501226 548 False 555.0 555 85.533000 3250 3780 1 chr3A.!!$F2 530
10 TraesCS5D01G049900 chr3A 455720371 455720889 518 False 475.0 475 83.877000 3275 3774 1 chr3A.!!$F1 499
11 TraesCS5D01G049900 chr1A 95532047 95532597 550 False 547.0 547 85.125000 3241 3780 1 chr1A.!!$F1 539
12 TraesCS5D01G049900 chrUn 101577577 101578083 506 True 492.0 492 84.470000 3262 3779 1 chrUn.!!$R1 517
13 TraesCS5D01G049900 chr6B 62820705 62821232 527 False 520.0 520 84.787000 3251 3776 1 chr6B.!!$F2 525
14 TraesCS5D01G049900 chr7D 595501978 595502531 553 True 508.0 508 84.164000 3251 3780 1 chr7D.!!$R1 529
15 TraesCS5D01G049900 chr1B 242727887 242728453 566 True 442.0 442 81.930000 3250 3779 1 chr1B.!!$R1 529
16 TraesCS5D01G049900 chr7B 674198589 674199540 951 True 424.0 424 75.078000 1347 2292 1 chr7B.!!$R2 945

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
504 505 0.036294 CCCCTCCGGTGTTTCTTCTC 60.036 60.0 0.0 0.0 0.00 2.87 F
505 506 0.036294 CCCTCCGGTGTTTCTTCTCC 60.036 60.0 0.0 0.0 0.00 3.71 F
507 508 0.317479 CTCCGGTGTTTCTTCTCCGT 59.683 55.0 0.0 0.0 41.12 4.69 F
522 523 0.395312 TCCGTTCCTGAGTTTGGACC 59.605 55.0 0.0 0.0 32.65 4.46 F
523 524 0.396811 CCGTTCCTGAGTTTGGACCT 59.603 55.0 0.0 0.0 32.65 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1585 1801 4.207955 TGAAGACACGCTAGACAGGATAT 58.792 43.478 0.00 0.0 0.00 1.63 R
2395 2630 6.212791 TGCAGGTTGAAAATAGTACTACCTCT 59.787 38.462 4.31 0.0 37.58 3.69 R
2528 2763 9.904198 TCAGATTCACATATTTATCTTCCAACA 57.096 29.630 0.00 0.0 0.00 3.33 R
2564 2799 3.245586 TGCCCCTTTGAATCCTGTAACAT 60.246 43.478 0.00 0.0 0.00 2.71 R
2958 3201 2.445845 CCCCATGGCCTCCTACGA 60.446 66.667 6.09 0.0 0.00 3.43 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.048597 ACGGCTGTGATTTCGCGA 60.049 55.556 3.71 3.71 0.00 5.87
18 19 2.094659 ACGGCTGTGATTTCGCGAG 61.095 57.895 9.59 0.00 0.00 5.03
19 20 1.805539 CGGCTGTGATTTCGCGAGA 60.806 57.895 9.59 4.97 39.20 4.04
20 21 1.746727 CGGCTGTGATTTCGCGAGAG 61.747 60.000 9.59 0.00 43.69 3.20
21 22 1.424493 GGCTGTGATTTCGCGAGAGG 61.424 60.000 9.59 0.00 43.69 3.69
22 23 0.737715 GCTGTGATTTCGCGAGAGGT 60.738 55.000 9.59 0.00 43.69 3.85
23 24 1.469251 GCTGTGATTTCGCGAGAGGTA 60.469 52.381 9.59 0.00 43.69 3.08
24 25 2.186076 CTGTGATTTCGCGAGAGGTAC 58.814 52.381 9.59 6.35 43.69 3.34
25 26 1.189403 GTGATTTCGCGAGAGGTACG 58.811 55.000 9.59 0.00 43.69 3.67
26 27 0.099968 TGATTTCGCGAGAGGTACGG 59.900 55.000 9.59 0.00 43.69 4.02
27 28 0.379669 GATTTCGCGAGAGGTACGGA 59.620 55.000 9.59 0.00 43.69 4.69
28 29 0.100146 ATTTCGCGAGAGGTACGGAC 59.900 55.000 9.59 0.00 43.69 4.79
29 30 2.244436 TTTCGCGAGAGGTACGGACG 62.244 60.000 9.59 0.00 43.69 4.79
30 31 3.494336 CGCGAGAGGTACGGACGT 61.494 66.667 0.00 1.98 0.00 4.34
31 32 2.099831 GCGAGAGGTACGGACGTG 59.900 66.667 7.73 0.00 0.00 4.49
32 33 2.099831 CGAGAGGTACGGACGTGC 59.900 66.667 7.73 5.96 0.00 5.34
37 38 2.968206 GGTACGGACGTGCCTCTT 59.032 61.111 21.92 0.00 45.50 2.85
38 39 1.291272 GGTACGGACGTGCCTCTTT 59.709 57.895 21.92 0.00 45.50 2.52
39 40 0.735287 GGTACGGACGTGCCTCTTTC 60.735 60.000 21.92 0.00 45.50 2.62
40 41 0.038892 GTACGGACGTGCCTCTTTCA 60.039 55.000 7.73 0.00 0.00 2.69
41 42 0.242825 TACGGACGTGCCTCTTTCAG 59.757 55.000 7.73 0.00 0.00 3.02
42 43 1.289066 CGGACGTGCCTCTTTCAGA 59.711 57.895 0.00 0.00 0.00 3.27
43 44 0.319555 CGGACGTGCCTCTTTCAGAA 60.320 55.000 0.00 0.00 0.00 3.02
44 45 1.872237 CGGACGTGCCTCTTTCAGAAA 60.872 52.381 0.00 0.00 0.00 2.52
45 46 1.801178 GGACGTGCCTCTTTCAGAAAG 59.199 52.381 15.89 15.89 39.88 2.62
46 47 1.801178 GACGTGCCTCTTTCAGAAAGG 59.199 52.381 20.70 9.48 39.01 3.11
47 48 1.416401 ACGTGCCTCTTTCAGAAAGGA 59.584 47.619 20.70 8.49 39.01 3.36
48 49 2.158813 ACGTGCCTCTTTCAGAAAGGAA 60.159 45.455 20.70 0.23 39.01 3.36
49 50 2.878406 CGTGCCTCTTTCAGAAAGGAAA 59.122 45.455 20.70 3.23 39.01 3.13
50 51 3.315191 CGTGCCTCTTTCAGAAAGGAAAA 59.685 43.478 20.70 2.89 39.01 2.29
51 52 4.202010 CGTGCCTCTTTCAGAAAGGAAAAA 60.202 41.667 20.70 2.55 39.01 1.94
67 68 4.943373 AAAAACCATGCTCCCGGT 57.057 50.000 0.00 0.00 36.98 5.28
69 70 0.678950 AAAAACCATGCTCCCGGTTG 59.321 50.000 0.00 0.00 44.80 3.77
70 71 1.184970 AAAACCATGCTCCCGGTTGG 61.185 55.000 0.00 1.78 44.80 3.77
71 72 2.366153 AAACCATGCTCCCGGTTGGT 62.366 55.000 0.00 2.46 44.80 3.67
72 73 2.035626 CCATGCTCCCGGTTGGTT 59.964 61.111 0.00 0.00 34.77 3.67
73 74 1.606313 CCATGCTCCCGGTTGGTTT 60.606 57.895 0.00 0.00 34.77 3.27
74 75 1.184970 CCATGCTCCCGGTTGGTTTT 61.185 55.000 0.00 0.00 34.77 2.43
75 76 0.678950 CATGCTCCCGGTTGGTTTTT 59.321 50.000 0.00 0.00 34.77 1.94
138 139 9.458374 AAAAGTTCGTCAAAACCTATTAACATG 57.542 29.630 0.00 0.00 0.00 3.21
139 140 7.141100 AGTTCGTCAAAACCTATTAACATGG 57.859 36.000 0.00 0.00 0.00 3.66
140 141 6.150474 AGTTCGTCAAAACCTATTAACATGGG 59.850 38.462 0.00 0.00 37.07 4.00
141 142 5.806818 TCGTCAAAACCTATTAACATGGGA 58.193 37.500 0.00 0.00 34.53 4.37
142 143 6.419791 TCGTCAAAACCTATTAACATGGGAT 58.580 36.000 0.00 0.00 34.53 3.85
143 144 6.540914 TCGTCAAAACCTATTAACATGGGATC 59.459 38.462 0.00 0.00 34.53 3.36
144 145 6.542370 CGTCAAAACCTATTAACATGGGATCT 59.458 38.462 0.00 0.00 34.53 2.75
145 146 7.713507 CGTCAAAACCTATTAACATGGGATCTA 59.286 37.037 0.00 0.00 34.53 1.98
146 147 9.057089 GTCAAAACCTATTAACATGGGATCTAG 57.943 37.037 0.00 0.00 34.53 2.43
147 148 8.778059 TCAAAACCTATTAACATGGGATCTAGT 58.222 33.333 0.00 0.00 34.53 2.57
148 149 9.408648 CAAAACCTATTAACATGGGATCTAGTT 57.591 33.333 0.00 0.00 34.53 2.24
149 150 9.990868 AAAACCTATTAACATGGGATCTAGTTT 57.009 29.630 0.00 0.00 34.53 2.66
150 151 9.990868 AAACCTATTAACATGGGATCTAGTTTT 57.009 29.630 0.00 0.00 34.53 2.43
151 152 8.980481 ACCTATTAACATGGGATCTAGTTTTG 57.020 34.615 0.00 0.00 34.53 2.44
152 153 8.778059 ACCTATTAACATGGGATCTAGTTTTGA 58.222 33.333 0.00 0.00 34.53 2.69
153 154 9.627123 CCTATTAACATGGGATCTAGTTTTGAA 57.373 33.333 0.00 0.00 32.51 2.69
156 157 9.927081 ATTAACATGGGATCTAGTTTTGAAGAT 57.073 29.630 0.00 0.00 0.00 2.40
157 158 7.872113 AACATGGGATCTAGTTTTGAAGATC 57.128 36.000 0.00 4.15 37.15 2.75
158 159 7.205515 ACATGGGATCTAGTTTTGAAGATCT 57.794 36.000 11.05 0.00 37.77 2.75
159 160 7.278875 ACATGGGATCTAGTTTTGAAGATCTC 58.721 38.462 11.05 8.38 38.41 2.75
160 161 5.907207 TGGGATCTAGTTTTGAAGATCTCG 58.093 41.667 11.05 0.00 40.21 4.04
161 162 5.656859 TGGGATCTAGTTTTGAAGATCTCGA 59.343 40.000 11.05 0.00 40.21 4.04
162 163 5.980715 GGGATCTAGTTTTGAAGATCTCGAC 59.019 44.000 11.05 0.00 37.77 4.20
163 164 5.683743 GGATCTAGTTTTGAAGATCTCGACG 59.316 44.000 11.05 0.00 37.77 5.12
164 165 4.413087 TCTAGTTTTGAAGATCTCGACGC 58.587 43.478 0.00 0.00 0.00 5.19
165 166 1.986378 AGTTTTGAAGATCTCGACGCG 59.014 47.619 3.53 3.53 0.00 6.01
166 167 1.983605 GTTTTGAAGATCTCGACGCGA 59.016 47.619 15.93 0.00 0.00 5.87
175 176 3.280211 TCGACGCGAGGAATCCAA 58.720 55.556 15.93 0.00 0.00 3.53
176 177 1.813859 TCGACGCGAGGAATCCAAT 59.186 52.632 15.93 0.00 0.00 3.16
177 178 0.527600 TCGACGCGAGGAATCCAATG 60.528 55.000 15.93 0.00 0.00 2.82
178 179 1.490693 CGACGCGAGGAATCCAATGG 61.491 60.000 15.93 0.00 0.00 3.16
179 180 0.462047 GACGCGAGGAATCCAATGGT 60.462 55.000 15.93 0.00 0.00 3.55
180 181 0.744414 ACGCGAGGAATCCAATGGTG 60.744 55.000 15.93 0.00 0.00 4.17
181 182 0.461870 CGCGAGGAATCCAATGGTGA 60.462 55.000 0.00 0.00 0.00 4.02
182 183 1.750193 GCGAGGAATCCAATGGTGAA 58.250 50.000 0.61 0.00 0.00 3.18
183 184 2.091541 GCGAGGAATCCAATGGTGAAA 58.908 47.619 0.61 0.00 0.00 2.69
184 185 2.491693 GCGAGGAATCCAATGGTGAAAA 59.508 45.455 0.61 0.00 0.00 2.29
185 186 3.673323 GCGAGGAATCCAATGGTGAAAAC 60.673 47.826 0.61 0.00 0.00 2.43
186 187 3.426159 CGAGGAATCCAATGGTGAAAACG 60.426 47.826 0.61 0.00 0.00 3.60
187 188 2.825532 AGGAATCCAATGGTGAAAACGG 59.174 45.455 0.61 0.00 0.00 4.44
188 189 2.560981 GGAATCCAATGGTGAAAACGGT 59.439 45.455 0.00 0.00 0.00 4.83
189 190 3.006430 GGAATCCAATGGTGAAAACGGTT 59.994 43.478 0.00 0.00 0.00 4.44
190 191 4.502431 GGAATCCAATGGTGAAAACGGTTT 60.502 41.667 0.00 0.00 0.00 3.27
191 192 3.444703 TCCAATGGTGAAAACGGTTTG 57.555 42.857 1.45 0.00 0.00 2.93
192 193 3.024547 TCCAATGGTGAAAACGGTTTGA 58.975 40.909 1.45 0.00 0.00 2.69
193 194 3.067461 TCCAATGGTGAAAACGGTTTGAG 59.933 43.478 1.45 0.00 0.00 3.02
194 195 3.067461 CCAATGGTGAAAACGGTTTGAGA 59.933 43.478 1.45 0.00 0.00 3.27
195 196 4.261994 CCAATGGTGAAAACGGTTTGAGAT 60.262 41.667 1.45 0.00 0.00 2.75
196 197 5.288804 CAATGGTGAAAACGGTTTGAGATT 58.711 37.500 1.45 0.00 0.00 2.40
197 198 4.993029 TGGTGAAAACGGTTTGAGATTT 57.007 36.364 1.45 0.00 0.00 2.17
198 199 4.677584 TGGTGAAAACGGTTTGAGATTTG 58.322 39.130 1.45 0.00 0.00 2.32
199 200 4.048504 GGTGAAAACGGTTTGAGATTTGG 58.951 43.478 1.45 0.00 0.00 3.28
200 201 4.202070 GGTGAAAACGGTTTGAGATTTGGA 60.202 41.667 1.45 0.00 0.00 3.53
201 202 4.738252 GTGAAAACGGTTTGAGATTTGGAC 59.262 41.667 1.45 0.00 0.00 4.02
202 203 3.619233 AAACGGTTTGAGATTTGGACG 57.381 42.857 5.12 0.00 0.00 4.79
203 204 0.872388 ACGGTTTGAGATTTGGACGC 59.128 50.000 0.00 0.00 0.00 5.19
204 205 0.871722 CGGTTTGAGATTTGGACGCA 59.128 50.000 0.00 0.00 0.00 5.24
205 206 1.399727 CGGTTTGAGATTTGGACGCAC 60.400 52.381 0.00 0.00 0.00 5.34
206 207 1.399727 GGTTTGAGATTTGGACGCACG 60.400 52.381 0.00 0.00 0.00 5.34
207 208 1.529438 GTTTGAGATTTGGACGCACGA 59.471 47.619 0.00 0.00 0.00 4.35
208 209 2.093306 TTGAGATTTGGACGCACGAT 57.907 45.000 0.00 0.00 0.00 3.73
209 210 2.093306 TGAGATTTGGACGCACGATT 57.907 45.000 0.00 0.00 0.00 3.34
210 211 2.422597 TGAGATTTGGACGCACGATTT 58.577 42.857 0.00 0.00 0.00 2.17
211 212 3.591023 TGAGATTTGGACGCACGATTTA 58.409 40.909 0.00 0.00 0.00 1.40
212 213 3.997681 TGAGATTTGGACGCACGATTTAA 59.002 39.130 0.00 0.00 0.00 1.52
213 214 4.092821 TGAGATTTGGACGCACGATTTAAG 59.907 41.667 0.00 0.00 0.00 1.85
214 215 4.250464 AGATTTGGACGCACGATTTAAGA 58.750 39.130 0.00 0.00 0.00 2.10
215 216 4.330074 AGATTTGGACGCACGATTTAAGAG 59.670 41.667 0.00 0.00 0.00 2.85
216 217 3.306917 TTGGACGCACGATTTAAGAGA 57.693 42.857 0.00 0.00 0.00 3.10
217 218 3.520290 TGGACGCACGATTTAAGAGAT 57.480 42.857 0.00 0.00 0.00 2.75
218 219 4.642445 TGGACGCACGATTTAAGAGATA 57.358 40.909 0.00 0.00 0.00 1.98
219 220 5.001237 TGGACGCACGATTTAAGAGATAA 57.999 39.130 0.00 0.00 0.00 1.75
220 221 5.412640 TGGACGCACGATTTAAGAGATAAA 58.587 37.500 0.00 0.00 37.86 1.40
221 222 5.870433 TGGACGCACGATTTAAGAGATAAAA 59.130 36.000 0.00 0.00 37.06 1.52
222 223 6.183324 GGACGCACGATTTAAGAGATAAAAC 58.817 40.000 0.00 0.00 37.06 2.43
245 246 6.321873 CGTTTTGAATAAACGGATCTACGA 57.678 37.500 13.31 0.00 46.39 3.43
246 247 6.754206 CGTTTTGAATAAACGGATCTACGAA 58.246 36.000 13.31 0.00 46.39 3.85
247 248 7.228840 CGTTTTGAATAAACGGATCTACGAAA 58.771 34.615 13.31 0.00 46.39 3.46
248 249 7.741216 CGTTTTGAATAAACGGATCTACGAAAA 59.259 33.333 13.31 0.00 46.39 2.29
249 250 9.384682 GTTTTGAATAAACGGATCTACGAAAAA 57.615 29.630 0.00 0.00 37.61 1.94
268 269 4.753516 AAAAGGAAAAACTCCCAGGTTG 57.246 40.909 0.00 0.00 46.81 3.77
269 270 1.704641 AGGAAAAACTCCCAGGTTGC 58.295 50.000 0.00 0.00 46.81 4.17
270 271 0.313987 GGAAAAACTCCCAGGTTGCG 59.686 55.000 0.00 0.00 38.44 4.85
271 272 1.314730 GAAAAACTCCCAGGTTGCGA 58.685 50.000 0.00 0.00 0.00 5.10
272 273 1.001706 GAAAAACTCCCAGGTTGCGAC 60.002 52.381 0.00 0.00 0.00 5.19
273 274 0.106918 AAAACTCCCAGGTTGCGACA 60.107 50.000 6.39 0.00 0.00 4.35
274 275 0.106918 AAACTCCCAGGTTGCGACAA 60.107 50.000 6.39 0.00 0.00 3.18
275 276 0.535102 AACTCCCAGGTTGCGACAAG 60.535 55.000 6.39 0.00 0.00 3.16
276 277 1.071471 CTCCCAGGTTGCGACAAGT 59.929 57.895 6.39 0.00 0.00 3.16
277 278 1.227823 TCCCAGGTTGCGACAAGTG 60.228 57.895 6.39 0.00 0.00 3.16
278 279 2.260869 CCCAGGTTGCGACAAGTGG 61.261 63.158 6.39 9.17 0.00 4.00
279 280 2.639286 CAGGTTGCGACAAGTGGC 59.361 61.111 6.39 0.00 34.76 5.01
300 301 2.438254 CTGCATGGGCGCCACTTA 60.438 61.111 30.85 11.81 45.35 2.24
301 302 1.825191 CTGCATGGGCGCCACTTAT 60.825 57.895 30.85 13.74 45.35 1.73
302 303 1.789078 CTGCATGGGCGCCACTTATC 61.789 60.000 30.85 10.31 45.35 1.75
303 304 2.896801 GCATGGGCGCCACTTATCG 61.897 63.158 30.85 9.79 35.80 2.92
304 305 1.523711 CATGGGCGCCACTTATCGT 60.524 57.895 30.85 8.02 35.80 3.73
305 306 1.523711 ATGGGCGCCACTTATCGTG 60.524 57.895 30.85 0.00 43.41 4.35
306 307 1.966901 ATGGGCGCCACTTATCGTGA 61.967 55.000 30.85 0.00 46.81 4.35
307 308 2.171725 GGGCGCCACTTATCGTGAC 61.172 63.158 30.85 1.22 46.81 3.67
308 309 2.171725 GGCGCCACTTATCGTGACC 61.172 63.158 24.80 0.00 46.81 4.02
309 310 2.171725 GCGCCACTTATCGTGACCC 61.172 63.158 0.00 0.00 46.81 4.46
310 311 1.876714 CGCCACTTATCGTGACCCG 60.877 63.158 0.00 0.00 46.81 5.28
311 312 1.520787 GCCACTTATCGTGACCCGG 60.521 63.158 0.00 0.00 46.81 5.73
312 313 1.143183 CCACTTATCGTGACCCGGG 59.857 63.158 22.25 22.25 46.81 5.73
313 314 1.324740 CCACTTATCGTGACCCGGGA 61.325 60.000 32.02 3.67 46.81 5.14
314 315 0.533491 CACTTATCGTGACCCGGGAA 59.467 55.000 32.02 12.80 46.81 3.97
315 316 0.822164 ACTTATCGTGACCCGGGAAG 59.178 55.000 32.02 20.64 37.11 3.46
316 317 0.104304 CTTATCGTGACCCGGGAAGG 59.896 60.000 32.02 20.12 40.63 3.46
317 318 0.615544 TTATCGTGACCCGGGAAGGT 60.616 55.000 32.02 13.77 45.12 3.50
318 319 1.324740 TATCGTGACCCGGGAAGGTG 61.325 60.000 32.02 12.92 41.42 4.00
319 320 4.388499 CGTGACCCGGGAAGGTGG 62.388 72.222 32.02 7.09 41.42 4.61
320 321 2.926242 GTGACCCGGGAAGGTGGA 60.926 66.667 32.02 0.00 41.42 4.02
321 322 2.606519 TGACCCGGGAAGGTGGAG 60.607 66.667 32.02 0.00 41.42 3.86
322 323 2.606826 GACCCGGGAAGGTGGAGT 60.607 66.667 32.02 0.00 41.42 3.85
323 324 2.928396 ACCCGGGAAGGTGGAGTG 60.928 66.667 32.02 0.00 39.24 3.51
324 325 2.928396 CCCGGGAAGGTGGAGTGT 60.928 66.667 18.48 0.00 38.74 3.55
325 326 2.526046 CCCGGGAAGGTGGAGTGTT 61.526 63.158 18.48 0.00 38.74 3.32
326 327 1.003718 CCGGGAAGGTGGAGTGTTC 60.004 63.158 0.00 0.00 34.51 3.18
327 328 1.481056 CCGGGAAGGTGGAGTGTTCT 61.481 60.000 0.00 0.00 34.51 3.01
328 329 0.396811 CGGGAAGGTGGAGTGTTCTT 59.603 55.000 0.00 0.00 0.00 2.52
329 330 1.202770 CGGGAAGGTGGAGTGTTCTTT 60.203 52.381 0.00 0.00 0.00 2.52
330 331 2.230660 GGGAAGGTGGAGTGTTCTTTG 58.769 52.381 0.00 0.00 0.00 2.77
331 332 1.609072 GGAAGGTGGAGTGTTCTTTGC 59.391 52.381 0.00 0.00 0.00 3.68
332 333 2.297701 GAAGGTGGAGTGTTCTTTGCA 58.702 47.619 0.00 0.00 0.00 4.08
333 334 2.435372 AGGTGGAGTGTTCTTTGCAA 57.565 45.000 0.00 0.00 0.00 4.08
334 335 2.024414 AGGTGGAGTGTTCTTTGCAAC 58.976 47.619 0.00 0.00 0.00 4.17
335 336 1.268539 GGTGGAGTGTTCTTTGCAACG 60.269 52.381 0.00 0.00 0.00 4.10
336 337 1.668751 GTGGAGTGTTCTTTGCAACGA 59.331 47.619 0.00 0.00 0.00 3.85
337 338 1.939934 TGGAGTGTTCTTTGCAACGAG 59.060 47.619 0.00 0.00 0.00 4.18
338 339 1.940613 GGAGTGTTCTTTGCAACGAGT 59.059 47.619 0.00 0.00 0.00 4.18
339 340 3.128349 GGAGTGTTCTTTGCAACGAGTA 58.872 45.455 0.00 0.00 0.00 2.59
340 341 3.059800 GGAGTGTTCTTTGCAACGAGTAC 60.060 47.826 0.00 6.11 0.00 2.73
341 342 3.793559 AGTGTTCTTTGCAACGAGTACT 58.206 40.909 14.37 14.37 0.00 2.73
342 343 3.802685 AGTGTTCTTTGCAACGAGTACTC 59.197 43.478 13.18 13.18 0.00 2.59
343 344 3.059800 GTGTTCTTTGCAACGAGTACTCC 60.060 47.826 17.23 3.69 0.00 3.85
344 345 3.181469 TGTTCTTTGCAACGAGTACTCCT 60.181 43.478 17.23 2.73 0.00 3.69
345 346 3.746045 TCTTTGCAACGAGTACTCCTT 57.254 42.857 17.23 9.18 0.00 3.36
346 347 4.859304 TCTTTGCAACGAGTACTCCTTA 57.141 40.909 17.23 0.00 0.00 2.69
347 348 5.204409 TCTTTGCAACGAGTACTCCTTAA 57.796 39.130 17.23 2.08 0.00 1.85
348 349 5.790593 TCTTTGCAACGAGTACTCCTTAAT 58.209 37.500 17.23 0.00 0.00 1.40
349 350 6.228258 TCTTTGCAACGAGTACTCCTTAATT 58.772 36.000 17.23 1.76 0.00 1.40
350 351 7.380536 TCTTTGCAACGAGTACTCCTTAATTA 58.619 34.615 17.23 0.00 0.00 1.40
351 352 7.544566 TCTTTGCAACGAGTACTCCTTAATTAG 59.455 37.037 17.23 7.81 0.00 1.73
352 353 6.276832 TGCAACGAGTACTCCTTAATTAGT 57.723 37.500 17.23 3.77 0.00 2.24
353 354 6.097356 TGCAACGAGTACTCCTTAATTAGTG 58.903 40.000 17.23 1.71 0.00 2.74
354 355 6.071784 TGCAACGAGTACTCCTTAATTAGTGA 60.072 38.462 17.23 0.00 0.00 3.41
355 356 6.979238 GCAACGAGTACTCCTTAATTAGTGAT 59.021 38.462 17.23 0.00 0.00 3.06
356 357 7.491696 GCAACGAGTACTCCTTAATTAGTGATT 59.508 37.037 17.23 0.00 0.00 2.57
357 358 9.367444 CAACGAGTACTCCTTAATTAGTGATTT 57.633 33.333 17.23 0.00 0.00 2.17
358 359 9.583765 AACGAGTACTCCTTAATTAGTGATTTC 57.416 33.333 17.23 0.00 0.00 2.17
359 360 7.914346 ACGAGTACTCCTTAATTAGTGATTTCG 59.086 37.037 17.23 2.39 0.00 3.46
360 361 7.096558 CGAGTACTCCTTAATTAGTGATTTCGC 60.097 40.741 17.23 0.00 0.00 4.70
361 362 6.985059 AGTACTCCTTAATTAGTGATTTCGCC 59.015 38.462 0.00 0.00 0.00 5.54
362 363 5.990668 ACTCCTTAATTAGTGATTTCGCCT 58.009 37.500 0.00 0.00 0.00 5.52
363 364 5.817816 ACTCCTTAATTAGTGATTTCGCCTG 59.182 40.000 0.00 0.00 0.00 4.85
364 365 5.741011 TCCTTAATTAGTGATTTCGCCTGT 58.259 37.500 0.00 0.00 0.00 4.00
365 366 6.177610 TCCTTAATTAGTGATTTCGCCTGTT 58.822 36.000 0.00 0.00 0.00 3.16
366 367 6.315393 TCCTTAATTAGTGATTTCGCCTGTTC 59.685 38.462 0.00 0.00 0.00 3.18
367 368 6.316390 CCTTAATTAGTGATTTCGCCTGTTCT 59.684 38.462 0.00 0.00 0.00 3.01
368 369 5.551760 AATTAGTGATTTCGCCTGTTCTG 57.448 39.130 0.00 0.00 0.00 3.02
369 370 1.813513 AGTGATTTCGCCTGTTCTGG 58.186 50.000 0.00 0.00 0.00 3.86
370 371 0.804989 GTGATTTCGCCTGTTCTGGG 59.195 55.000 0.00 0.00 0.00 4.45
371 372 0.960364 TGATTTCGCCTGTTCTGGGC 60.960 55.000 0.00 0.00 45.57 5.36
372 373 1.657751 GATTTCGCCTGTTCTGGGCC 61.658 60.000 0.00 0.00 46.24 5.80
373 374 2.142292 ATTTCGCCTGTTCTGGGCCT 62.142 55.000 4.53 0.00 46.24 5.19
374 375 3.551496 TTCGCCTGTTCTGGGCCTG 62.551 63.158 4.53 4.06 46.24 4.85
393 394 3.585020 CGCCTGCTGCACACACAA 61.585 61.111 0.00 0.00 41.33 3.33
394 395 2.806929 GCCTGCTGCACACACAAA 59.193 55.556 0.00 0.00 40.77 2.83
395 396 1.141449 GCCTGCTGCACACACAAAA 59.859 52.632 0.00 0.00 40.77 2.44
396 397 0.872881 GCCTGCTGCACACACAAAAG 60.873 55.000 0.00 0.00 40.77 2.27
397 398 0.872881 CCTGCTGCACACACAAAAGC 60.873 55.000 0.00 0.00 0.00 3.51
398 399 1.204228 CTGCTGCACACACAAAAGCG 61.204 55.000 0.00 0.00 36.66 4.68
399 400 2.579574 GCTGCACACACAAAAGCGC 61.580 57.895 0.00 0.00 0.00 5.92
400 401 1.064621 CTGCACACACAAAAGCGCT 59.935 52.632 2.64 2.64 0.00 5.92
401 402 1.204228 CTGCACACACAAAAGCGCTG 61.204 55.000 12.58 0.89 0.00 5.18
402 403 1.945662 GCACACACAAAAGCGCTGG 60.946 57.895 12.58 6.56 0.00 4.85
403 404 1.299316 CACACACAAAAGCGCTGGG 60.299 57.895 12.58 2.32 0.00 4.45
404 405 1.453015 ACACACAAAAGCGCTGGGA 60.453 52.632 12.58 0.00 0.00 4.37
405 406 1.283793 CACACAAAAGCGCTGGGAG 59.716 57.895 12.58 4.80 0.00 4.30
406 407 1.898574 ACACAAAAGCGCTGGGAGG 60.899 57.895 12.58 3.57 0.00 4.30
407 408 2.282462 ACAAAAGCGCTGGGAGGG 60.282 61.111 12.58 0.00 0.00 4.30
408 409 2.282462 CAAAAGCGCTGGGAGGGT 60.282 61.111 12.58 0.00 0.00 4.34
409 410 1.002624 CAAAAGCGCTGGGAGGGTA 60.003 57.895 12.58 0.00 0.00 3.69
410 411 0.394352 CAAAAGCGCTGGGAGGGTAT 60.394 55.000 12.58 0.00 0.00 2.73
411 412 0.331616 AAAAGCGCTGGGAGGGTATT 59.668 50.000 12.58 0.00 0.00 1.89
412 413 0.331616 AAAGCGCTGGGAGGGTATTT 59.668 50.000 12.58 0.00 0.00 1.40
413 414 0.107165 AAGCGCTGGGAGGGTATTTC 60.107 55.000 12.58 0.00 0.00 2.17
414 415 0.983378 AGCGCTGGGAGGGTATTTCT 60.983 55.000 10.39 0.00 0.00 2.52
415 416 0.533085 GCGCTGGGAGGGTATTTCTC 60.533 60.000 0.00 0.00 0.00 2.87
416 417 0.830648 CGCTGGGAGGGTATTTCTCA 59.169 55.000 0.00 0.00 33.18 3.27
417 418 1.209504 CGCTGGGAGGGTATTTCTCAA 59.790 52.381 0.00 0.00 33.18 3.02
418 419 2.355716 CGCTGGGAGGGTATTTCTCAAA 60.356 50.000 0.00 0.00 33.18 2.69
419 420 3.697166 GCTGGGAGGGTATTTCTCAAAA 58.303 45.455 0.00 0.00 33.18 2.44
420 421 4.086457 GCTGGGAGGGTATTTCTCAAAAA 58.914 43.478 0.00 0.00 33.18 1.94
443 444 3.249687 AAAAAGCGCTAGGAGGGTG 57.750 52.632 12.05 0.00 0.00 4.61
444 445 0.690762 AAAAAGCGCTAGGAGGGTGA 59.309 50.000 12.05 0.00 0.00 4.02
445 446 0.690762 AAAAGCGCTAGGAGGGTGAA 59.309 50.000 12.05 0.00 0.00 3.18
446 447 0.912486 AAAGCGCTAGGAGGGTGAAT 59.088 50.000 12.05 0.00 0.00 2.57
447 448 0.466124 AAGCGCTAGGAGGGTGAATC 59.534 55.000 12.05 0.00 0.00 2.52
448 449 0.397816 AGCGCTAGGAGGGTGAATCT 60.398 55.000 8.99 0.00 0.00 2.40
449 450 1.133450 AGCGCTAGGAGGGTGAATCTA 60.133 52.381 8.99 0.00 0.00 1.98
450 451 1.687123 GCGCTAGGAGGGTGAATCTAA 59.313 52.381 0.00 0.00 0.00 2.10
451 452 2.102588 GCGCTAGGAGGGTGAATCTAAA 59.897 50.000 0.00 0.00 0.00 1.85
452 453 3.431766 GCGCTAGGAGGGTGAATCTAAAA 60.432 47.826 0.00 0.00 0.00 1.52
453 454 4.766375 CGCTAGGAGGGTGAATCTAAAAA 58.234 43.478 0.00 0.00 0.00 1.94
475 476 2.283173 AAAAAGCGCTGGGAGGGG 60.283 61.111 12.58 0.00 0.00 4.79
476 477 2.840753 AAAAAGCGCTGGGAGGGGA 61.841 57.895 12.58 0.00 0.00 4.81
477 478 2.366153 AAAAAGCGCTGGGAGGGGAA 62.366 55.000 12.58 0.00 0.00 3.97
478 479 2.771328 AAAAGCGCTGGGAGGGGAAG 62.771 60.000 12.58 0.00 0.00 3.46
481 482 4.479993 CGCTGGGAGGGGAAGCAG 62.480 72.222 0.00 0.00 36.73 4.24
482 483 3.011517 GCTGGGAGGGGAAGCAGA 61.012 66.667 0.00 0.00 36.91 4.26
483 484 3.041469 GCTGGGAGGGGAAGCAGAG 62.041 68.421 0.00 0.00 36.91 3.35
484 485 1.306482 CTGGGAGGGGAAGCAGAGA 60.306 63.158 0.00 0.00 0.00 3.10
485 486 1.613630 TGGGAGGGGAAGCAGAGAC 60.614 63.158 0.00 0.00 0.00 3.36
486 487 2.371259 GGGAGGGGAAGCAGAGACC 61.371 68.421 0.00 0.00 0.00 3.85
487 488 2.371259 GGAGGGGAAGCAGAGACCC 61.371 68.421 0.00 0.00 43.69 4.46
490 491 3.314951 GGGAAGCAGAGACCCCTC 58.685 66.667 0.00 0.00 37.85 4.30
491 492 2.371259 GGGAAGCAGAGACCCCTCC 61.371 68.421 0.00 0.00 40.30 4.30
492 493 2.726351 GGAAGCAGAGACCCCTCCG 61.726 68.421 0.00 0.00 40.30 4.63
493 494 2.685380 AAGCAGAGACCCCTCCGG 60.685 66.667 0.00 0.00 40.30 5.14
501 502 3.997196 ACCCCTCCGGTGTTTCTT 58.003 55.556 0.00 0.00 46.09 2.52
502 503 1.759236 ACCCCTCCGGTGTTTCTTC 59.241 57.895 0.00 0.00 46.09 2.87
503 504 0.767060 ACCCCTCCGGTGTTTCTTCT 60.767 55.000 0.00 0.00 46.09 2.85
504 505 0.036294 CCCCTCCGGTGTTTCTTCTC 60.036 60.000 0.00 0.00 0.00 2.87
505 506 0.036294 CCCTCCGGTGTTTCTTCTCC 60.036 60.000 0.00 0.00 0.00 3.71
506 507 0.389948 CCTCCGGTGTTTCTTCTCCG 60.390 60.000 0.00 0.00 41.97 4.63
507 508 0.317479 CTCCGGTGTTTCTTCTCCGT 59.683 55.000 0.00 0.00 41.12 4.69
508 509 0.754472 TCCGGTGTTTCTTCTCCGTT 59.246 50.000 0.00 0.00 41.12 4.44
509 510 1.145803 CCGGTGTTTCTTCTCCGTTC 58.854 55.000 0.00 0.00 41.12 3.95
510 511 1.145803 CGGTGTTTCTTCTCCGTTCC 58.854 55.000 0.00 0.00 38.92 3.62
511 512 1.270147 CGGTGTTTCTTCTCCGTTCCT 60.270 52.381 0.00 0.00 38.92 3.36
512 513 2.143925 GGTGTTTCTTCTCCGTTCCTG 58.856 52.381 0.00 0.00 0.00 3.86
513 514 2.224209 GGTGTTTCTTCTCCGTTCCTGA 60.224 50.000 0.00 0.00 0.00 3.86
514 515 3.060602 GTGTTTCTTCTCCGTTCCTGAG 58.939 50.000 0.00 0.00 0.00 3.35
515 516 2.698797 TGTTTCTTCTCCGTTCCTGAGT 59.301 45.455 0.00 0.00 0.00 3.41
516 517 3.134081 TGTTTCTTCTCCGTTCCTGAGTT 59.866 43.478 0.00 0.00 0.00 3.01
517 518 4.127907 GTTTCTTCTCCGTTCCTGAGTTT 58.872 43.478 0.00 0.00 0.00 2.66
518 519 3.386768 TCTTCTCCGTTCCTGAGTTTG 57.613 47.619 0.00 0.00 0.00 2.93
519 520 2.037251 TCTTCTCCGTTCCTGAGTTTGG 59.963 50.000 0.00 0.00 0.00 3.28
520 521 1.712056 TCTCCGTTCCTGAGTTTGGA 58.288 50.000 0.00 0.00 0.00 3.53
521 522 1.343465 TCTCCGTTCCTGAGTTTGGAC 59.657 52.381 0.00 0.00 32.65 4.02
522 523 0.395312 TCCGTTCCTGAGTTTGGACC 59.605 55.000 0.00 0.00 32.65 4.46
523 524 0.396811 CCGTTCCTGAGTTTGGACCT 59.603 55.000 0.00 0.00 32.65 3.85
524 525 1.202770 CCGTTCCTGAGTTTGGACCTT 60.203 52.381 0.00 0.00 32.65 3.50
525 526 2.038033 CCGTTCCTGAGTTTGGACCTTA 59.962 50.000 0.00 0.00 32.65 2.69
526 527 3.307480 CCGTTCCTGAGTTTGGACCTTAT 60.307 47.826 0.00 0.00 32.65 1.73
527 528 4.324267 CGTTCCTGAGTTTGGACCTTATT 58.676 43.478 0.00 0.00 32.65 1.40
528 529 5.484715 CGTTCCTGAGTTTGGACCTTATTA 58.515 41.667 0.00 0.00 32.65 0.98
529 530 5.350640 CGTTCCTGAGTTTGGACCTTATTAC 59.649 44.000 0.00 0.00 32.65 1.89
530 531 6.235664 GTTCCTGAGTTTGGACCTTATTACA 58.764 40.000 0.00 0.00 32.65 2.41
531 532 5.801380 TCCTGAGTTTGGACCTTATTACAC 58.199 41.667 0.00 0.00 0.00 2.90
532 533 4.941873 CCTGAGTTTGGACCTTATTACACC 59.058 45.833 0.00 0.00 0.00 4.16
809 827 2.561373 CCGCGCTCCCACTTTTTC 59.439 61.111 5.56 0.00 0.00 2.29
813 831 1.533731 CGCGCTCCCACTTTTTCTTTA 59.466 47.619 5.56 0.00 0.00 1.85
824 846 5.009310 CCACTTTTTCTTTAAGTTACGGGCT 59.991 40.000 0.00 0.00 33.73 5.19
843 865 3.807071 GGCTGCAGAGCTAAGTAAAGATC 59.193 47.826 20.43 0.00 45.44 2.75
852 874 9.565213 CAGAGCTAAGTAAAGATCCAATTTTTG 57.435 33.333 0.00 0.00 32.20 2.44
867 889 4.877378 ATTTTTGTGATGCACACCAGAT 57.123 36.364 14.23 3.02 44.47 2.90
882 905 5.579904 CACACCAGATGACTTACTGATTCTG 59.420 44.000 0.00 0.00 36.38 3.02
968 991 3.244596 GCTCCCTAACCTCTTGTTTGTCT 60.245 47.826 0.00 0.00 38.42 3.41
989 1014 7.679783 TGTCTGATGTTCCTCAATCTTCTTTA 58.320 34.615 0.00 0.00 0.00 1.85
1359 1572 2.165167 CAGCACACCCAGATGTTCATT 58.835 47.619 0.00 0.00 0.00 2.57
1585 1801 9.515020 CATTTGAGCTTTTAGACAACAAAAGTA 57.485 29.630 8.78 0.00 42.42 2.24
2528 2763 3.512680 CTTCGAGACAAGAAATACCGCT 58.487 45.455 0.00 0.00 0.00 5.52
2564 2799 3.421919 TGTGAATCTGAAGGACATGCA 57.578 42.857 0.00 0.00 0.00 3.96
2891 3131 2.107204 GGGACGGAGGGAGTACTACATA 59.893 54.545 7.57 0.00 0.00 2.29
2958 3201 4.463539 TGATTTATTGTCCAGCAGCACATT 59.536 37.500 0.00 0.00 0.00 2.71
3077 3328 9.877178 GGAGTATAAGTCGATTTCAATATGGAT 57.123 33.333 0.00 0.00 0.00 3.41
3097 3348 7.837202 TGGATTACACACGGAGTAAAATAAG 57.163 36.000 0.00 0.00 41.61 1.73
3235 3486 4.641954 CAGCACATGTTCATTACTCGTTC 58.358 43.478 0.00 0.00 0.00 3.95
3236 3487 4.152223 CAGCACATGTTCATTACTCGTTCA 59.848 41.667 0.00 0.00 0.00 3.18
3237 3488 4.389992 AGCACATGTTCATTACTCGTTCAG 59.610 41.667 0.00 0.00 0.00 3.02
3238 3489 4.388773 GCACATGTTCATTACTCGTTCAGA 59.611 41.667 0.00 0.00 0.00 3.27
3239 3490 5.107104 GCACATGTTCATTACTCGTTCAGAA 60.107 40.000 0.00 0.00 0.00 3.02
3244 3495 9.398170 CATGTTCATTACTCGTTCAGAAAAATT 57.602 29.630 0.00 0.00 0.00 1.82
3246 3497 8.616942 TGTTCATTACTCGTTCAGAAAAATTCA 58.383 29.630 0.00 0.00 0.00 2.57
3248 3499 8.378172 TCATTACTCGTTCAGAAAAATTCACT 57.622 30.769 0.00 0.00 0.00 3.41
3288 3539 1.191535 CACTTGGGGGTCATCTACGA 58.808 55.000 0.00 0.00 0.00 3.43
3359 3610 0.388659 TTGCCAAGTGTGCATTGACC 59.611 50.000 0.01 0.00 38.76 4.02
3403 3657 0.446222 ATACGCATGCACACGGTTTC 59.554 50.000 19.57 0.00 0.00 2.78
3433 3688 6.523840 TGCAAAACTGCCAGAATAAAAGATT 58.476 32.000 0.00 0.00 0.00 2.40
3512 3825 3.934962 GCCGATGCCCTCTCCCTC 61.935 72.222 0.00 0.00 0.00 4.30
3513 3826 3.610669 CCGATGCCCTCTCCCTCG 61.611 72.222 0.00 0.00 0.00 4.63
3516 3829 2.841988 ATGCCCTCTCCCTCGCTC 60.842 66.667 0.00 0.00 0.00 5.03
3517 3830 3.387609 ATGCCCTCTCCCTCGCTCT 62.388 63.158 0.00 0.00 0.00 4.09
3519 3832 2.600731 CCCTCTCCCTCGCTCTCT 59.399 66.667 0.00 0.00 0.00 3.10
3520 3833 1.827789 CCCTCTCCCTCGCTCTCTG 60.828 68.421 0.00 0.00 0.00 3.35
3522 3835 1.453745 CTCTCCCTCGCTCTCTGCT 60.454 63.158 0.00 0.00 40.11 4.24
3524 3837 1.453745 CTCCCTCGCTCTCTGCTCT 60.454 63.158 0.00 0.00 40.11 4.09
3525 3838 1.447317 CTCCCTCGCTCTCTGCTCTC 61.447 65.000 0.00 0.00 40.11 3.20
3526 3839 2.489275 CCCTCGCTCTCTGCTCTCC 61.489 68.421 0.00 0.00 40.11 3.71
3528 3841 1.752310 CTCGCTCTCTGCTCTCCCA 60.752 63.158 0.00 0.00 40.11 4.37
3531 3844 1.220477 GCTCTCTGCTCTCCCAACC 59.780 63.158 0.00 0.00 38.95 3.77
3535 3848 1.118838 CTCTGCTCTCCCAACCCTAG 58.881 60.000 0.00 0.00 0.00 3.02
3536 3849 0.710588 TCTGCTCTCCCAACCCTAGA 59.289 55.000 0.00 0.00 0.00 2.43
3537 3850 1.292242 TCTGCTCTCCCAACCCTAGAT 59.708 52.381 0.00 0.00 0.00 1.98
3618 3977 3.959449 CCTCTCTCCTCATGTCATCTTCA 59.041 47.826 0.00 0.00 0.00 3.02
3663 4022 1.952266 GCCGCTCCGTTGTAGTTTCG 61.952 60.000 0.00 0.00 0.00 3.46
3694 4053 2.125552 CGGATTGTGGCGAGCAGA 60.126 61.111 0.00 0.00 0.00 4.26
3716 4075 0.905357 AAGTTCTACCGCTCTGGCAT 59.095 50.000 0.00 0.00 43.94 4.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.048597 TCGCGAAATCACAGCCGT 60.049 55.556 6.20 0.00 0.00 5.68
2 3 1.424493 CCTCTCGCGAAATCACAGCC 61.424 60.000 11.33 0.00 0.00 4.85
3 4 0.737715 ACCTCTCGCGAAATCACAGC 60.738 55.000 11.33 0.00 0.00 4.40
5 6 1.466866 CGTACCTCTCGCGAAATCACA 60.467 52.381 11.33 0.00 0.00 3.58
6 7 1.189403 CGTACCTCTCGCGAAATCAC 58.811 55.000 11.33 3.88 0.00 3.06
7 8 0.099968 CCGTACCTCTCGCGAAATCA 59.900 55.000 11.33 0.00 0.00 2.57
8 9 0.379669 TCCGTACCTCTCGCGAAATC 59.620 55.000 11.33 0.00 0.00 2.17
9 10 0.100146 GTCCGTACCTCTCGCGAAAT 59.900 55.000 11.33 0.00 0.00 2.17
10 11 1.503542 GTCCGTACCTCTCGCGAAA 59.496 57.895 11.33 0.00 0.00 3.46
11 12 2.743752 CGTCCGTACCTCTCGCGAA 61.744 63.158 11.33 0.02 0.00 4.70
12 13 3.190849 CGTCCGTACCTCTCGCGA 61.191 66.667 9.26 9.26 0.00 5.87
13 14 3.494336 ACGTCCGTACCTCTCGCG 61.494 66.667 0.00 0.00 0.00 5.87
14 15 2.099831 CACGTCCGTACCTCTCGC 59.900 66.667 0.00 0.00 0.00 5.03
15 16 2.099831 GCACGTCCGTACCTCTCG 59.900 66.667 0.00 0.00 0.00 4.04
16 17 2.045131 AGGCACGTCCGTACCTCTC 61.045 63.158 5.78 0.00 37.30 3.20
17 18 2.035312 AGGCACGTCCGTACCTCT 59.965 61.111 5.78 0.00 37.30 3.69
19 20 1.183676 AAAGAGGCACGTCCGTACCT 61.184 55.000 11.26 11.26 44.06 3.08
20 21 0.735287 GAAAGAGGCACGTCCGTACC 60.735 60.000 0.72 0.72 40.77 3.34
21 22 0.038892 TGAAAGAGGCACGTCCGTAC 60.039 55.000 0.00 0.00 40.77 3.67
22 23 0.242825 CTGAAAGAGGCACGTCCGTA 59.757 55.000 0.00 0.00 40.77 4.02
23 24 1.006102 CTGAAAGAGGCACGTCCGT 60.006 57.895 0.00 0.00 40.77 4.69
24 25 1.289066 TCTGAAAGAGGCACGTCCG 59.711 57.895 0.00 0.00 38.67 4.79
50 51 0.678950 CAACCGGGAGCATGGTTTTT 59.321 50.000 6.32 0.00 46.04 1.94
51 52 1.184970 CCAACCGGGAGCATGGTTTT 61.185 55.000 6.32 0.00 46.04 2.43
52 53 1.606313 CCAACCGGGAGCATGGTTT 60.606 57.895 6.32 0.00 46.04 3.27
54 55 2.366153 AAACCAACCGGGAGCATGGT 62.366 55.000 6.32 9.35 45.41 3.55
55 56 1.184970 AAAACCAACCGGGAGCATGG 61.185 55.000 6.32 8.66 41.15 3.66
56 57 0.678950 AAAAACCAACCGGGAGCATG 59.321 50.000 6.32 0.00 41.15 4.06
57 58 3.141409 AAAAACCAACCGGGAGCAT 57.859 47.368 6.32 0.00 41.15 3.79
58 59 4.688770 AAAAACCAACCGGGAGCA 57.311 50.000 6.32 0.00 41.15 4.26
112 113 9.458374 CATGTTAATAGGTTTTGACGAACTTTT 57.542 29.630 0.00 0.00 0.00 2.27
113 114 8.079809 CCATGTTAATAGGTTTTGACGAACTTT 58.920 33.333 0.00 0.00 0.00 2.66
114 115 7.308951 CCCATGTTAATAGGTTTTGACGAACTT 60.309 37.037 0.00 0.00 0.00 2.66
115 116 6.150474 CCCATGTTAATAGGTTTTGACGAACT 59.850 38.462 0.00 0.00 0.00 3.01
116 117 6.149807 TCCCATGTTAATAGGTTTTGACGAAC 59.850 38.462 0.00 0.00 0.00 3.95
117 118 6.239396 TCCCATGTTAATAGGTTTTGACGAA 58.761 36.000 0.00 0.00 0.00 3.85
118 119 5.806818 TCCCATGTTAATAGGTTTTGACGA 58.193 37.500 0.00 0.00 0.00 4.20
119 120 6.542370 AGATCCCATGTTAATAGGTTTTGACG 59.458 38.462 0.00 0.00 0.00 4.35
120 121 7.881775 AGATCCCATGTTAATAGGTTTTGAC 57.118 36.000 0.00 0.00 0.00 3.18
121 122 8.778059 ACTAGATCCCATGTTAATAGGTTTTGA 58.222 33.333 0.00 0.00 0.00 2.69
122 123 8.980481 ACTAGATCCCATGTTAATAGGTTTTG 57.020 34.615 0.00 0.00 0.00 2.44
123 124 9.990868 AAACTAGATCCCATGTTAATAGGTTTT 57.009 29.630 0.00 0.00 0.00 2.43
124 125 9.990868 AAAACTAGATCCCATGTTAATAGGTTT 57.009 29.630 0.00 0.00 0.00 3.27
125 126 9.408648 CAAAACTAGATCCCATGTTAATAGGTT 57.591 33.333 0.00 0.00 0.00 3.50
126 127 8.778059 TCAAAACTAGATCCCATGTTAATAGGT 58.222 33.333 0.00 0.00 0.00 3.08
127 128 9.627123 TTCAAAACTAGATCCCATGTTAATAGG 57.373 33.333 0.00 0.00 0.00 2.57
130 131 9.927081 ATCTTCAAAACTAGATCCCATGTTAAT 57.073 29.630 0.00 0.00 0.00 1.40
131 132 9.396022 GATCTTCAAAACTAGATCCCATGTTAA 57.604 33.333 0.00 0.00 33.15 2.01
132 133 8.772250 AGATCTTCAAAACTAGATCCCATGTTA 58.228 33.333 0.00 0.00 38.24 2.41
133 134 7.637511 AGATCTTCAAAACTAGATCCCATGTT 58.362 34.615 0.00 0.00 38.24 2.71
134 135 7.205515 AGATCTTCAAAACTAGATCCCATGT 57.794 36.000 0.00 0.00 38.24 3.21
135 136 6.423302 CGAGATCTTCAAAACTAGATCCCATG 59.577 42.308 0.00 0.00 38.24 3.66
136 137 6.325028 TCGAGATCTTCAAAACTAGATCCCAT 59.675 38.462 0.00 0.00 38.24 4.00
137 138 5.656859 TCGAGATCTTCAAAACTAGATCCCA 59.343 40.000 0.00 0.00 38.24 4.37
138 139 5.980715 GTCGAGATCTTCAAAACTAGATCCC 59.019 44.000 0.00 0.00 38.24 3.85
139 140 5.683743 CGTCGAGATCTTCAAAACTAGATCC 59.316 44.000 0.00 1.33 38.24 3.36
140 141 5.172411 GCGTCGAGATCTTCAAAACTAGATC 59.828 44.000 0.00 0.00 37.89 2.75
141 142 5.038033 GCGTCGAGATCTTCAAAACTAGAT 58.962 41.667 0.00 0.00 0.00 1.98
142 143 4.413087 GCGTCGAGATCTTCAAAACTAGA 58.587 43.478 0.00 0.00 0.00 2.43
143 144 3.238570 CGCGTCGAGATCTTCAAAACTAG 59.761 47.826 0.00 0.00 0.00 2.57
144 145 3.120095 TCGCGTCGAGATCTTCAAAACTA 60.120 43.478 5.77 0.00 0.00 2.24
145 146 1.986378 CGCGTCGAGATCTTCAAAACT 59.014 47.619 0.00 0.00 0.00 2.66
146 147 1.983605 TCGCGTCGAGATCTTCAAAAC 59.016 47.619 5.77 0.00 0.00 2.43
147 148 2.341318 TCGCGTCGAGATCTTCAAAA 57.659 45.000 5.77 0.00 0.00 2.44
158 159 0.527600 CATTGGATTCCTCGCGTCGA 60.528 55.000 5.77 0.00 0.00 4.20
159 160 1.490693 CCATTGGATTCCTCGCGTCG 61.491 60.000 5.77 0.00 0.00 5.12
160 161 0.462047 ACCATTGGATTCCTCGCGTC 60.462 55.000 10.37 0.00 0.00 5.19
161 162 0.744414 CACCATTGGATTCCTCGCGT 60.744 55.000 10.37 0.00 0.00 6.01
162 163 0.461870 TCACCATTGGATTCCTCGCG 60.462 55.000 10.37 0.00 0.00 5.87
163 164 1.750193 TTCACCATTGGATTCCTCGC 58.250 50.000 10.37 0.00 0.00 5.03
164 165 3.426159 CGTTTTCACCATTGGATTCCTCG 60.426 47.826 10.37 3.97 0.00 4.63
165 166 3.119495 CCGTTTTCACCATTGGATTCCTC 60.119 47.826 10.37 0.00 0.00 3.71
166 167 2.825532 CCGTTTTCACCATTGGATTCCT 59.174 45.455 10.37 0.00 0.00 3.36
167 168 2.560981 ACCGTTTTCACCATTGGATTCC 59.439 45.455 10.37 0.00 0.00 3.01
168 169 3.934457 ACCGTTTTCACCATTGGATTC 57.066 42.857 10.37 0.00 0.00 2.52
169 170 4.100189 TCAAACCGTTTTCACCATTGGATT 59.900 37.500 10.37 0.00 0.00 3.01
170 171 3.639094 TCAAACCGTTTTCACCATTGGAT 59.361 39.130 10.37 0.00 0.00 3.41
171 172 3.024547 TCAAACCGTTTTCACCATTGGA 58.975 40.909 10.37 0.00 0.00 3.53
172 173 3.067461 TCTCAAACCGTTTTCACCATTGG 59.933 43.478 0.00 0.00 0.00 3.16
173 174 4.300189 TCTCAAACCGTTTTCACCATTG 57.700 40.909 0.00 0.00 0.00 2.82
174 175 5.529581 AATCTCAAACCGTTTTCACCATT 57.470 34.783 0.00 0.00 0.00 3.16
175 176 5.288804 CAAATCTCAAACCGTTTTCACCAT 58.711 37.500 0.00 0.00 0.00 3.55
176 177 4.440802 CCAAATCTCAAACCGTTTTCACCA 60.441 41.667 0.00 0.00 0.00 4.17
177 178 4.048504 CCAAATCTCAAACCGTTTTCACC 58.951 43.478 0.00 0.00 0.00 4.02
178 179 4.738252 GTCCAAATCTCAAACCGTTTTCAC 59.262 41.667 0.00 0.00 0.00 3.18
179 180 4.496673 CGTCCAAATCTCAAACCGTTTTCA 60.497 41.667 0.00 0.00 0.00 2.69
180 181 3.972502 CGTCCAAATCTCAAACCGTTTTC 59.027 43.478 0.00 0.00 0.00 2.29
181 182 3.794138 GCGTCCAAATCTCAAACCGTTTT 60.794 43.478 0.00 0.00 0.00 2.43
182 183 2.287368 GCGTCCAAATCTCAAACCGTTT 60.287 45.455 0.00 0.00 0.00 3.60
183 184 1.265905 GCGTCCAAATCTCAAACCGTT 59.734 47.619 0.00 0.00 0.00 4.44
184 185 0.872388 GCGTCCAAATCTCAAACCGT 59.128 50.000 0.00 0.00 0.00 4.83
185 186 0.871722 TGCGTCCAAATCTCAAACCG 59.128 50.000 0.00 0.00 0.00 4.44
186 187 1.399727 CGTGCGTCCAAATCTCAAACC 60.400 52.381 0.00 0.00 0.00 3.27
187 188 1.529438 TCGTGCGTCCAAATCTCAAAC 59.471 47.619 0.00 0.00 0.00 2.93
188 189 1.872388 TCGTGCGTCCAAATCTCAAA 58.128 45.000 0.00 0.00 0.00 2.69
189 190 2.093306 ATCGTGCGTCCAAATCTCAA 57.907 45.000 0.00 0.00 0.00 3.02
190 191 2.093306 AATCGTGCGTCCAAATCTCA 57.907 45.000 0.00 0.00 0.00 3.27
191 192 4.328983 TCTTAAATCGTGCGTCCAAATCTC 59.671 41.667 0.00 0.00 0.00 2.75
192 193 4.250464 TCTTAAATCGTGCGTCCAAATCT 58.750 39.130 0.00 0.00 0.00 2.40
193 194 4.328983 TCTCTTAAATCGTGCGTCCAAATC 59.671 41.667 0.00 0.00 0.00 2.17
194 195 4.250464 TCTCTTAAATCGTGCGTCCAAAT 58.750 39.130 0.00 0.00 0.00 2.32
195 196 3.655486 TCTCTTAAATCGTGCGTCCAAA 58.345 40.909 0.00 0.00 0.00 3.28
196 197 3.306917 TCTCTTAAATCGTGCGTCCAA 57.693 42.857 0.00 0.00 0.00 3.53
197 198 3.520290 ATCTCTTAAATCGTGCGTCCA 57.480 42.857 0.00 0.00 0.00 4.02
198 199 5.961395 TTTATCTCTTAAATCGTGCGTCC 57.039 39.130 0.00 0.00 0.00 4.79
199 200 5.889425 CGTTTTATCTCTTAAATCGTGCGTC 59.111 40.000 0.00 0.00 37.83 5.19
200 201 5.346822 ACGTTTTATCTCTTAAATCGTGCGT 59.653 36.000 11.31 0.00 46.54 5.24
201 202 5.782255 ACGTTTTATCTCTTAAATCGTGCG 58.218 37.500 11.31 0.00 46.54 5.34
220 221 7.095691 TTCGTAGATCCGTTTATTCAAAACGTT 60.096 33.333 18.32 0.00 43.53 3.99
221 222 6.365789 TTCGTAGATCCGTTTATTCAAAACGT 59.634 34.615 18.32 4.51 43.53 3.99
222 223 6.754206 TTCGTAGATCCGTTTATTCAAAACG 58.246 36.000 14.30 14.30 44.14 3.60
223 224 8.938047 TTTTCGTAGATCCGTTTATTCAAAAC 57.062 30.769 0.00 0.00 35.04 2.43
246 247 4.625324 GCAACCTGGGAGTTTTTCCTTTTT 60.625 41.667 0.00 0.00 45.98 1.94
247 248 3.118408 GCAACCTGGGAGTTTTTCCTTTT 60.118 43.478 0.00 0.00 45.98 2.27
248 249 2.434336 GCAACCTGGGAGTTTTTCCTTT 59.566 45.455 0.00 0.00 45.98 3.11
249 250 2.039418 GCAACCTGGGAGTTTTTCCTT 58.961 47.619 0.00 0.00 45.98 3.36
250 251 1.704641 GCAACCTGGGAGTTTTTCCT 58.295 50.000 0.00 0.00 45.98 3.36
251 252 0.313987 CGCAACCTGGGAGTTTTTCC 59.686 55.000 0.00 0.00 46.00 3.13
252 253 1.001706 GTCGCAACCTGGGAGTTTTTC 60.002 52.381 0.00 0.00 40.09 2.29
253 254 1.029681 GTCGCAACCTGGGAGTTTTT 58.970 50.000 0.00 0.00 40.09 1.94
254 255 0.106918 TGTCGCAACCTGGGAGTTTT 60.107 50.000 0.00 0.00 40.09 2.43
255 256 0.106918 TTGTCGCAACCTGGGAGTTT 60.107 50.000 0.00 0.00 40.09 2.66
256 257 0.535102 CTTGTCGCAACCTGGGAGTT 60.535 55.000 0.00 0.00 40.09 3.01
257 258 1.071471 CTTGTCGCAACCTGGGAGT 59.929 57.895 0.00 0.00 40.09 3.85
258 259 1.071471 ACTTGTCGCAACCTGGGAG 59.929 57.895 0.00 0.00 40.09 4.30
259 260 1.227823 CACTTGTCGCAACCTGGGA 60.228 57.895 0.00 0.00 36.96 4.37
260 261 2.260869 CCACTTGTCGCAACCTGGG 61.261 63.158 0.00 0.00 0.00 4.45
261 262 2.908073 GCCACTTGTCGCAACCTGG 61.908 63.158 0.00 0.00 0.00 4.45
262 263 2.639286 GCCACTTGTCGCAACCTG 59.361 61.111 0.00 0.00 0.00 4.00
263 264 2.972505 CGCCACTTGTCGCAACCT 60.973 61.111 0.00 0.00 0.00 3.50
283 284 1.789078 GATAAGTGGCGCCCATGCAG 61.789 60.000 26.77 0.00 35.28 4.41
284 285 1.823470 GATAAGTGGCGCCCATGCA 60.823 57.895 26.77 0.09 35.28 3.96
285 286 2.896801 CGATAAGTGGCGCCCATGC 61.897 63.158 26.77 11.71 35.28 4.06
286 287 1.523711 ACGATAAGTGGCGCCCATG 60.524 57.895 26.77 9.16 35.28 3.66
287 288 1.523711 CACGATAAGTGGCGCCCAT 60.524 57.895 26.77 12.74 46.77 4.00
288 289 2.125310 CACGATAAGTGGCGCCCA 60.125 61.111 26.77 9.53 46.77 5.36
302 303 4.388499 CCACCTTCCCGGGTCACG 62.388 72.222 22.86 9.23 37.52 4.35
303 304 2.926242 TCCACCTTCCCGGGTCAC 60.926 66.667 22.86 0.00 37.52 3.67
304 305 2.606519 CTCCACCTTCCCGGGTCA 60.607 66.667 22.86 7.77 37.52 4.02
305 306 2.606826 ACTCCACCTTCCCGGGTC 60.607 66.667 22.86 0.00 37.52 4.46
306 307 2.928396 CACTCCACCTTCCCGGGT 60.928 66.667 22.86 0.00 40.73 5.28
307 308 2.465055 GAACACTCCACCTTCCCGGG 62.465 65.000 16.85 16.85 36.97 5.73
308 309 1.003718 GAACACTCCACCTTCCCGG 60.004 63.158 0.00 0.00 39.35 5.73
309 310 0.396811 AAGAACACTCCACCTTCCCG 59.603 55.000 0.00 0.00 0.00 5.14
310 311 2.230660 CAAAGAACACTCCACCTTCCC 58.769 52.381 0.00 0.00 0.00 3.97
311 312 1.609072 GCAAAGAACACTCCACCTTCC 59.391 52.381 0.00 0.00 0.00 3.46
312 313 2.297701 TGCAAAGAACACTCCACCTTC 58.702 47.619 0.00 0.00 0.00 3.46
313 314 2.427095 GTTGCAAAGAACACTCCACCTT 59.573 45.455 0.00 0.00 0.00 3.50
314 315 2.024414 GTTGCAAAGAACACTCCACCT 58.976 47.619 0.00 0.00 0.00 4.00
315 316 1.268539 CGTTGCAAAGAACACTCCACC 60.269 52.381 6.52 0.00 0.00 4.61
316 317 1.668751 TCGTTGCAAAGAACACTCCAC 59.331 47.619 12.88 0.00 0.00 4.02
317 318 1.939934 CTCGTTGCAAAGAACACTCCA 59.060 47.619 15.91 0.00 0.00 3.86
318 319 1.940613 ACTCGTTGCAAAGAACACTCC 59.059 47.619 15.91 0.00 0.00 3.85
319 320 3.802685 AGTACTCGTTGCAAAGAACACTC 59.197 43.478 15.91 5.78 0.00 3.51
320 321 3.793559 AGTACTCGTTGCAAAGAACACT 58.206 40.909 15.91 16.69 0.00 3.55
321 322 3.059800 GGAGTACTCGTTGCAAAGAACAC 60.060 47.826 15.91 14.96 0.00 3.32
322 323 3.128349 GGAGTACTCGTTGCAAAGAACA 58.872 45.455 15.91 4.24 0.00 3.18
323 324 3.391049 AGGAGTACTCGTTGCAAAGAAC 58.609 45.455 15.91 11.95 0.00 3.01
324 325 3.746045 AGGAGTACTCGTTGCAAAGAA 57.254 42.857 15.91 0.00 0.00 2.52
325 326 3.746045 AAGGAGTACTCGTTGCAAAGA 57.254 42.857 25.72 14.45 36.47 2.52
326 327 6.481954 AATTAAGGAGTACTCGTTGCAAAG 57.518 37.500 31.33 2.46 38.07 2.77
327 328 7.117236 CACTAATTAAGGAGTACTCGTTGCAAA 59.883 37.037 31.33 21.62 38.07 3.68
328 329 6.588756 CACTAATTAAGGAGTACTCGTTGCAA 59.411 38.462 31.33 22.18 38.07 4.08
329 330 6.071784 TCACTAATTAAGGAGTACTCGTTGCA 60.072 38.462 31.33 21.45 38.07 4.08
330 331 6.327934 TCACTAATTAAGGAGTACTCGTTGC 58.672 40.000 31.33 13.49 38.07 4.17
331 332 8.928270 AATCACTAATTAAGGAGTACTCGTTG 57.072 34.615 31.33 20.36 38.07 4.10
332 333 9.583765 GAAATCACTAATTAAGGAGTACTCGTT 57.416 33.333 28.20 28.20 40.33 3.85
333 334 7.914346 CGAAATCACTAATTAAGGAGTACTCGT 59.086 37.037 16.56 14.43 0.00 4.18
334 335 7.096558 GCGAAATCACTAATTAAGGAGTACTCG 60.097 40.741 16.56 2.92 0.00 4.18
335 336 7.169476 GGCGAAATCACTAATTAAGGAGTACTC 59.831 40.741 14.87 14.87 0.00 2.59
336 337 6.985059 GGCGAAATCACTAATTAAGGAGTACT 59.015 38.462 0.00 0.00 0.00 2.73
337 338 6.985059 AGGCGAAATCACTAATTAAGGAGTAC 59.015 38.462 0.00 0.00 0.00 2.73
338 339 6.984474 CAGGCGAAATCACTAATTAAGGAGTA 59.016 38.462 0.00 0.00 0.00 2.59
339 340 5.817816 CAGGCGAAATCACTAATTAAGGAGT 59.182 40.000 0.00 0.00 0.00 3.85
340 341 5.817816 ACAGGCGAAATCACTAATTAAGGAG 59.182 40.000 0.00 0.00 0.00 3.69
341 342 5.741011 ACAGGCGAAATCACTAATTAAGGA 58.259 37.500 0.00 0.00 0.00 3.36
342 343 6.316390 AGAACAGGCGAAATCACTAATTAAGG 59.684 38.462 0.00 0.00 0.00 2.69
343 344 7.182761 CAGAACAGGCGAAATCACTAATTAAG 58.817 38.462 0.00 0.00 0.00 1.85
344 345 6.093495 CCAGAACAGGCGAAATCACTAATTAA 59.907 38.462 0.00 0.00 0.00 1.40
345 346 5.584649 CCAGAACAGGCGAAATCACTAATTA 59.415 40.000 0.00 0.00 0.00 1.40
346 347 4.396166 CCAGAACAGGCGAAATCACTAATT 59.604 41.667 0.00 0.00 0.00 1.40
347 348 3.941483 CCAGAACAGGCGAAATCACTAAT 59.059 43.478 0.00 0.00 0.00 1.73
348 349 3.334691 CCAGAACAGGCGAAATCACTAA 58.665 45.455 0.00 0.00 0.00 2.24
349 350 2.354704 CCCAGAACAGGCGAAATCACTA 60.355 50.000 0.00 0.00 0.00 2.74
350 351 1.611673 CCCAGAACAGGCGAAATCACT 60.612 52.381 0.00 0.00 0.00 3.41
351 352 0.804989 CCCAGAACAGGCGAAATCAC 59.195 55.000 0.00 0.00 0.00 3.06
352 353 0.960364 GCCCAGAACAGGCGAAATCA 60.960 55.000 0.00 0.00 41.41 2.57
353 354 1.803289 GCCCAGAACAGGCGAAATC 59.197 57.895 0.00 0.00 41.41 2.17
354 355 4.002797 GCCCAGAACAGGCGAAAT 57.997 55.556 0.00 0.00 41.41 2.17
377 378 0.872881 CTTTTGTGTGTGCAGCAGGC 60.873 55.000 0.00 0.00 45.13 4.85
378 379 0.872881 GCTTTTGTGTGTGCAGCAGG 60.873 55.000 0.00 0.00 0.00 4.85
379 380 1.204228 CGCTTTTGTGTGTGCAGCAG 61.204 55.000 0.00 0.00 0.00 4.24
380 381 1.226632 CGCTTTTGTGTGTGCAGCA 60.227 52.632 0.00 0.00 0.00 4.41
381 382 2.579574 GCGCTTTTGTGTGTGCAGC 61.580 57.895 0.00 0.00 39.25 5.25
382 383 1.064621 AGCGCTTTTGTGTGTGCAG 59.935 52.632 2.64 0.00 41.57 4.41
383 384 1.226632 CAGCGCTTTTGTGTGTGCA 60.227 52.632 7.50 0.00 41.57 4.57
384 385 1.945662 CCAGCGCTTTTGTGTGTGC 60.946 57.895 7.50 0.00 39.68 4.57
385 386 1.299316 CCCAGCGCTTTTGTGTGTG 60.299 57.895 7.50 0.00 0.00 3.82
386 387 1.447317 CTCCCAGCGCTTTTGTGTGT 61.447 55.000 7.50 0.00 0.00 3.72
387 388 1.283793 CTCCCAGCGCTTTTGTGTG 59.716 57.895 7.50 0.00 0.00 3.82
388 389 1.898574 CCTCCCAGCGCTTTTGTGT 60.899 57.895 7.50 0.00 0.00 3.72
389 390 2.629656 CCCTCCCAGCGCTTTTGTG 61.630 63.158 7.50 0.00 0.00 3.33
390 391 1.774894 TACCCTCCCAGCGCTTTTGT 61.775 55.000 7.50 1.81 0.00 2.83
391 392 0.394352 ATACCCTCCCAGCGCTTTTG 60.394 55.000 7.50 0.00 0.00 2.44
392 393 0.331616 AATACCCTCCCAGCGCTTTT 59.668 50.000 7.50 0.00 0.00 2.27
393 394 0.331616 AAATACCCTCCCAGCGCTTT 59.668 50.000 7.50 0.00 0.00 3.51
394 395 0.107165 GAAATACCCTCCCAGCGCTT 60.107 55.000 7.50 0.00 0.00 4.68
395 396 0.983378 AGAAATACCCTCCCAGCGCT 60.983 55.000 2.64 2.64 0.00 5.92
396 397 0.533085 GAGAAATACCCTCCCAGCGC 60.533 60.000 0.00 0.00 0.00 5.92
397 398 0.830648 TGAGAAATACCCTCCCAGCG 59.169 55.000 0.00 0.00 0.00 5.18
398 399 3.366052 TTTGAGAAATACCCTCCCAGC 57.634 47.619 0.00 0.00 0.00 4.85
425 426 0.690762 TCACCCTCCTAGCGCTTTTT 59.309 50.000 18.68 0.00 0.00 1.94
426 427 0.690762 TTCACCCTCCTAGCGCTTTT 59.309 50.000 18.68 0.00 0.00 2.27
427 428 0.912486 ATTCACCCTCCTAGCGCTTT 59.088 50.000 18.68 0.00 0.00 3.51
428 429 0.466124 GATTCACCCTCCTAGCGCTT 59.534 55.000 18.68 0.00 0.00 4.68
429 430 0.397816 AGATTCACCCTCCTAGCGCT 60.398 55.000 17.26 17.26 0.00 5.92
430 431 1.329256 TAGATTCACCCTCCTAGCGC 58.671 55.000 0.00 0.00 0.00 5.92
431 432 4.402056 TTTTAGATTCACCCTCCTAGCG 57.598 45.455 0.00 0.00 0.00 4.26
458 459 2.283173 CCCCTCCCAGCGCTTTTT 60.283 61.111 7.50 0.00 0.00 1.94
459 460 2.771328 CTTCCCCTCCCAGCGCTTTT 62.771 60.000 7.50 0.00 0.00 2.27
460 461 3.256960 TTCCCCTCCCAGCGCTTT 61.257 61.111 7.50 0.00 0.00 3.51
461 462 3.721706 CTTCCCCTCCCAGCGCTT 61.722 66.667 7.50 0.00 0.00 4.68
464 465 4.479993 CTGCTTCCCCTCCCAGCG 62.480 72.222 0.00 0.00 36.24 5.18
465 466 3.011517 TCTGCTTCCCCTCCCAGC 61.012 66.667 0.00 0.00 0.00 4.85
466 467 1.306482 TCTCTGCTTCCCCTCCCAG 60.306 63.158 0.00 0.00 0.00 4.45
467 468 1.613630 GTCTCTGCTTCCCCTCCCA 60.614 63.158 0.00 0.00 0.00 4.37
468 469 2.371259 GGTCTCTGCTTCCCCTCCC 61.371 68.421 0.00 0.00 0.00 4.30
469 470 2.371259 GGGTCTCTGCTTCCCCTCC 61.371 68.421 0.00 0.00 35.52 4.30
470 471 3.314951 GGGTCTCTGCTTCCCCTC 58.685 66.667 0.00 0.00 35.52 4.30
473 474 2.371259 GGAGGGGTCTCTGCTTCCC 61.371 68.421 0.00 0.00 39.86 3.97
474 475 2.726351 CGGAGGGGTCTCTGCTTCC 61.726 68.421 0.00 0.00 39.29 3.46
475 476 2.896443 CGGAGGGGTCTCTGCTTC 59.104 66.667 0.00 0.00 39.29 3.86
488 489 0.317479 ACGGAGAAGAAACACCGGAG 59.683 55.000 9.46 1.26 45.36 4.63
489 490 0.754472 AACGGAGAAGAAACACCGGA 59.246 50.000 9.46 0.00 45.36 5.14
490 491 1.145803 GAACGGAGAAGAAACACCGG 58.854 55.000 0.00 0.00 45.36 5.28
491 492 1.145803 GGAACGGAGAAGAAACACCG 58.854 55.000 0.00 0.00 46.20 4.94
492 493 2.143925 CAGGAACGGAGAAGAAACACC 58.856 52.381 0.00 0.00 0.00 4.16
493 494 3.107642 TCAGGAACGGAGAAGAAACAC 57.892 47.619 0.00 0.00 0.00 3.32
503 504 0.395312 GGTCCAAACTCAGGAACGGA 59.605 55.000 0.00 0.00 36.80 4.69
504 505 2.928416 GGTCCAAACTCAGGAACGG 58.072 57.895 0.00 0.00 36.80 4.44
506 507 6.148976 GTGTAATAAGGTCCAAACTCAGGAAC 59.851 42.308 0.00 0.00 43.37 3.62
507 508 6.235664 GTGTAATAAGGTCCAAACTCAGGAA 58.764 40.000 0.00 0.00 36.80 3.36
508 509 5.280317 GGTGTAATAAGGTCCAAACTCAGGA 60.280 44.000 0.00 0.00 0.00 3.86
509 510 4.941873 GGTGTAATAAGGTCCAAACTCAGG 59.058 45.833 0.00 0.00 0.00 3.86
510 511 5.556915 TGGTGTAATAAGGTCCAAACTCAG 58.443 41.667 0.00 0.00 0.00 3.35
511 512 5.570205 TGGTGTAATAAGGTCCAAACTCA 57.430 39.130 0.00 0.00 0.00 3.41
512 513 6.887626 TTTGGTGTAATAAGGTCCAAACTC 57.112 37.500 0.00 0.00 41.31 3.01
513 514 7.849322 ATTTTGGTGTAATAAGGTCCAAACT 57.151 32.000 7.09 0.66 44.33 2.66
514 515 9.984190 TTTATTTTGGTGTAATAAGGTCCAAAC 57.016 29.630 7.09 0.00 44.33 2.93
515 516 9.984190 GTTTATTTTGGTGTAATAAGGTCCAAA 57.016 29.630 0.00 0.00 43.43 3.28
516 517 8.586744 GGTTTATTTTGGTGTAATAAGGTCCAA 58.413 33.333 0.00 0.00 36.55 3.53
517 518 7.178805 GGGTTTATTTTGGTGTAATAAGGTCCA 59.821 37.037 0.00 0.00 31.27 4.02
518 519 7.178805 TGGGTTTATTTTGGTGTAATAAGGTCC 59.821 37.037 0.00 0.00 31.27 4.46
519 520 8.124808 TGGGTTTATTTTGGTGTAATAAGGTC 57.875 34.615 0.00 0.00 31.27 3.85
520 521 8.673456 ATGGGTTTATTTTGGTGTAATAAGGT 57.327 30.769 0.00 0.00 31.27 3.50
521 522 8.977412 AGATGGGTTTATTTTGGTGTAATAAGG 58.023 33.333 0.00 0.00 31.27 2.69
523 524 8.679100 CGAGATGGGTTTATTTTGGTGTAATAA 58.321 33.333 0.00 0.00 0.00 1.40
524 525 7.283580 CCGAGATGGGTTTATTTTGGTGTAATA 59.716 37.037 0.00 0.00 0.00 0.98
525 526 6.096282 CCGAGATGGGTTTATTTTGGTGTAAT 59.904 38.462 0.00 0.00 0.00 1.89
526 527 5.416326 CCGAGATGGGTTTATTTTGGTGTAA 59.584 40.000 0.00 0.00 0.00 2.41
527 528 4.944930 CCGAGATGGGTTTATTTTGGTGTA 59.055 41.667 0.00 0.00 0.00 2.90
528 529 3.761752 CCGAGATGGGTTTATTTTGGTGT 59.238 43.478 0.00 0.00 0.00 4.16
529 530 4.370364 CCGAGATGGGTTTATTTTGGTG 57.630 45.455 0.00 0.00 0.00 4.17
775 793 2.761160 GCGGGGGAAAGAGGGAAA 59.239 61.111 0.00 0.00 0.00 3.13
809 827 2.673368 CTCTGCAGCCCGTAACTTAAAG 59.327 50.000 9.47 0.00 0.00 1.85
813 831 1.376037 GCTCTGCAGCCCGTAACTT 60.376 57.895 9.47 0.00 40.14 2.66
824 846 5.420725 TTGGATCTTTACTTAGCTCTGCA 57.579 39.130 0.00 0.00 0.00 4.41
843 865 3.464907 TGGTGTGCATCACAAAAATTGG 58.535 40.909 17.34 0.00 46.28 3.16
852 874 2.105006 AGTCATCTGGTGTGCATCAC 57.895 50.000 9.96 9.96 45.47 3.06
867 889 6.183360 TGTCTGAAACCAGAATCAGTAAGTCA 60.183 38.462 0.00 0.00 41.85 3.41
882 905 6.075046 GCGTAAACTGAATTTTGTCTGAAACC 60.075 38.462 0.00 0.00 0.00 3.27
929 952 3.076032 GGGAGCATGGGGTTAATAAGGAT 59.924 47.826 0.00 0.00 0.00 3.24
968 991 6.372659 GCTGTAAAGAAGATTGAGGAACATCA 59.627 38.462 0.00 0.00 0.00 3.07
989 1014 1.074775 TTCCCCATTCAAGCGCTGT 59.925 52.632 12.58 0.00 0.00 4.40
1157 1189 9.914131 GCAAAAGGAGAAGACAAATTTAAGTAT 57.086 29.630 0.00 0.00 0.00 2.12
1299 1512 6.902224 TTCTTACATACATCATTGACACCG 57.098 37.500 0.00 0.00 0.00 4.94
1585 1801 4.207955 TGAAGACACGCTAGACAGGATAT 58.792 43.478 0.00 0.00 0.00 1.63
2394 2629 6.535508 GCAGGTTGAAAATAGTACTACCTCTG 59.464 42.308 4.31 6.20 37.58 3.35
2395 2630 6.212791 TGCAGGTTGAAAATAGTACTACCTCT 59.787 38.462 4.31 0.00 37.58 3.69
2528 2763 9.904198 TCAGATTCACATATTTATCTTCCAACA 57.096 29.630 0.00 0.00 0.00 3.33
2564 2799 3.245586 TGCCCCTTTGAATCCTGTAACAT 60.246 43.478 0.00 0.00 0.00 2.71
2958 3201 2.445845 CCCCATGGCCTCCTACGA 60.446 66.667 6.09 0.00 0.00 3.43
3077 3328 8.836268 ATTCACTTATTTTACTCCGTGTGTAA 57.164 30.769 0.00 0.00 0.00 2.41
3244 3495 8.409371 TGCAAGTTTGATGTTTGTATTTAGTGA 58.591 29.630 0.00 0.00 0.00 3.41
3246 3497 8.413229 AGTGCAAGTTTGATGTTTGTATTTAGT 58.587 29.630 0.00 0.00 0.00 2.24
3248 3499 9.029243 CAAGTGCAAGTTTGATGTTTGTATTTA 57.971 29.630 0.00 0.00 0.00 1.40
3256 3507 2.102925 CCCCAAGTGCAAGTTTGATGTT 59.897 45.455 8.07 0.00 0.00 2.71
3257 3508 1.688197 CCCCAAGTGCAAGTTTGATGT 59.312 47.619 8.07 0.00 0.00 3.06
3260 3511 0.032615 ACCCCCAAGTGCAAGTTTGA 60.033 50.000 8.07 0.00 0.00 2.69
3288 3539 9.787435 ATATGTACACAAAACCGTATAATGGAT 57.213 29.630 0.00 0.00 0.00 3.41
3495 3783 3.934962 GAGGGAGAGGGCATCGGC 61.935 72.222 0.00 0.00 40.13 5.54
3499 3787 2.841988 GAGCGAGGGAGAGGGCAT 60.842 66.667 0.00 0.00 0.00 4.40
3513 3826 1.220477 GGTTGGGAGAGCAGAGAGC 59.780 63.158 0.00 0.00 46.19 4.09
3516 3829 1.118838 CTAGGGTTGGGAGAGCAGAG 58.881 60.000 0.00 0.00 0.00 3.35
3517 3830 0.710588 TCTAGGGTTGGGAGAGCAGA 59.289 55.000 0.00 0.00 0.00 4.26
3519 3832 1.500474 CATCTAGGGTTGGGAGAGCA 58.500 55.000 0.00 0.00 0.00 4.26
3520 3833 0.107643 GCATCTAGGGTTGGGAGAGC 59.892 60.000 0.00 0.00 0.00 4.09
3522 3835 0.694444 GGGCATCTAGGGTTGGGAGA 60.694 60.000 0.00 0.00 0.00 3.71
3524 3837 0.694444 GAGGGCATCTAGGGTTGGGA 60.694 60.000 0.00 0.00 0.00 4.37
3525 3838 1.709994 GGAGGGCATCTAGGGTTGGG 61.710 65.000 0.00 0.00 0.00 4.12
3526 3839 1.839894 GGAGGGCATCTAGGGTTGG 59.160 63.158 0.00 0.00 0.00 3.77
3528 3841 2.444256 GCGGAGGGCATCTAGGGTT 61.444 63.158 0.00 0.00 42.87 4.11
3531 3844 3.996124 CGGCGGAGGGCATCTAGG 61.996 72.222 0.00 0.00 46.16 3.02
3618 3977 0.107945 GCCCAGATCGAACAGAGCTT 60.108 55.000 0.00 0.00 44.27 3.74
3694 4053 1.134670 GCCAGAGCGGTAGAACTTGAT 60.135 52.381 0.00 0.00 36.97 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.