Multiple sequence alignment - TraesCS5D01G047500

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G047500 chr5D 100.000 2552 0 0 1 2552 45519529 45516978 0.000000e+00 4713
1 TraesCS5D01G047500 chr5D 94.165 1988 78 13 573 2552 44511941 44513898 0.000000e+00 2994
2 TraesCS5D01G047500 chr5D 93.256 1987 85 11 575 2552 357075968 357074022 0.000000e+00 2881
3 TraesCS5D01G047500 chr5D 92.903 465 21 4 2097 2552 473076925 473077386 0.000000e+00 665
4 TraesCS5D01G047500 chr5D 96.286 350 11 2 1 348 12079360 12079011 7.920000e-160 573
5 TraesCS5D01G047500 chr5D 96.264 348 11 2 1 346 114453610 114453263 1.020000e-158 569
6 TraesCS5D01G047500 chr5D 91.422 408 24 2 575 971 482332203 482331796 1.330000e-152 549
7 TraesCS5D01G047500 chr4D 93.451 1985 95 20 573 2552 78732771 78730817 0.000000e+00 2913
8 TraesCS5D01G047500 chrUn 94.027 1942 80 21 618 2552 43407879 43409791 0.000000e+00 2911
9 TraesCS5D01G047500 chr2B 93.000 2000 102 19 575 2552 173503419 173501436 0.000000e+00 2883
10 TraesCS5D01G047500 chr2B 93.056 1872 103 14 573 2430 71201258 71199400 0.000000e+00 2712
11 TraesCS5D01G047500 chr2D 93.232 1980 92 15 578 2552 84780830 84782772 0.000000e+00 2876
12 TraesCS5D01G047500 chr2D 96.562 349 9 3 1 346 429889745 429889397 2.200000e-160 575
13 TraesCS5D01G047500 chr2D 96.296 351 10 3 1 348 242543274 242542924 7.920000e-160 573
14 TraesCS5D01G047500 chr2D 95.225 356 12 5 1 353 162598044 162598397 2.220000e-155 558
15 TraesCS5D01G047500 chr7B 92.786 1996 111 10 574 2549 58797355 58799337 0.000000e+00 2857
16 TraesCS5D01G047500 chr7B 92.920 1130 52 12 573 1682 723752394 723751273 0.000000e+00 1618
17 TraesCS5D01G047500 chr7A 92.207 1989 109 21 575 2552 30966346 30968299 0.000000e+00 2772
18 TraesCS5D01G047500 chr7A 92.045 1760 97 23 567 2311 15645796 15647527 0.000000e+00 2435
19 TraesCS5D01G047500 chr3D 92.447 1761 82 19 573 2306 17578803 17577067 0.000000e+00 2468
20 TraesCS5D01G047500 chr3D 96.264 348 11 2 1 346 104164343 104164690 1.020000e-158 569
21 TraesCS5D01G047500 chr1D 96.286 350 10 3 1 347 73564920 73565269 2.850000e-159 571
22 TraesCS5D01G047500 chr1D 95.251 358 14 3 1 355 215836127 215835770 4.770000e-157 564
23 TraesCS5D01G047500 chr7D 96.275 349 10 3 1 346 7350451 7350103 1.020000e-158 569


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G047500 chr5D 45516978 45519529 2551 True 4713 4713 100.000 1 2552 1 chr5D.!!$R2 2551
1 TraesCS5D01G047500 chr5D 44511941 44513898 1957 False 2994 2994 94.165 573 2552 1 chr5D.!!$F1 1979
2 TraesCS5D01G047500 chr5D 357074022 357075968 1946 True 2881 2881 93.256 575 2552 1 chr5D.!!$R4 1977
3 TraesCS5D01G047500 chr4D 78730817 78732771 1954 True 2913 2913 93.451 573 2552 1 chr4D.!!$R1 1979
4 TraesCS5D01G047500 chrUn 43407879 43409791 1912 False 2911 2911 94.027 618 2552 1 chrUn.!!$F1 1934
5 TraesCS5D01G047500 chr2B 173501436 173503419 1983 True 2883 2883 93.000 575 2552 1 chr2B.!!$R2 1977
6 TraesCS5D01G047500 chr2B 71199400 71201258 1858 True 2712 2712 93.056 573 2430 1 chr2B.!!$R1 1857
7 TraesCS5D01G047500 chr2D 84780830 84782772 1942 False 2876 2876 93.232 578 2552 1 chr2D.!!$F1 1974
8 TraesCS5D01G047500 chr7B 58797355 58799337 1982 False 2857 2857 92.786 574 2549 1 chr7B.!!$F1 1975
9 TraesCS5D01G047500 chr7B 723751273 723752394 1121 True 1618 1618 92.920 573 1682 1 chr7B.!!$R1 1109
10 TraesCS5D01G047500 chr7A 30966346 30968299 1953 False 2772 2772 92.207 575 2552 1 chr7A.!!$F2 1977
11 TraesCS5D01G047500 chr7A 15645796 15647527 1731 False 2435 2435 92.045 567 2311 1 chr7A.!!$F1 1744
12 TraesCS5D01G047500 chr3D 17577067 17578803 1736 True 2468 2468 92.447 573 2306 1 chr3D.!!$R1 1733

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
244 245 0.033011 AGCGTGGTCTCCTACTGGAT 60.033 55.0 0.0 0.0 42.29 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2225 2348 0.393448 TAGCGGTTACCAGTGCAACA 59.607 50.0 1.13 0.0 41.43 3.33 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.425925 AAACCTATGGCCCCCGGG 61.426 66.667 15.80 15.80 38.57 5.73
18 19 4.771745 AACCTATGGCCCCCGGGT 62.772 66.667 21.85 1.96 37.65 5.28
20 21 4.900259 CCTATGGCCCCCGGGTCT 62.900 72.222 21.85 0.94 41.25 3.85
21 22 2.203182 CTATGGCCCCCGGGTCTA 59.797 66.667 21.85 9.28 41.25 2.59
22 23 1.229529 CTATGGCCCCCGGGTCTAT 60.230 63.158 21.85 16.13 41.25 1.98
23 24 0.840722 CTATGGCCCCCGGGTCTATT 60.841 60.000 21.85 3.54 41.25 1.73
24 25 0.838987 TATGGCCCCCGGGTCTATTC 60.839 60.000 21.85 3.13 41.25 1.75
25 26 2.447959 GGCCCCCGGGTCTATTCT 60.448 66.667 21.85 0.00 36.84 2.40
26 27 2.517798 GGCCCCCGGGTCTATTCTC 61.518 68.421 21.85 0.00 36.84 2.87
27 28 1.459730 GCCCCCGGGTCTATTCTCT 60.460 63.158 21.85 0.00 37.65 3.10
28 29 0.178941 GCCCCCGGGTCTATTCTCTA 60.179 60.000 21.85 0.00 37.65 2.43
29 30 1.552719 GCCCCCGGGTCTATTCTCTAT 60.553 57.143 21.85 0.00 37.65 1.98
30 31 2.458620 CCCCCGGGTCTATTCTCTATC 58.541 57.143 21.85 0.00 0.00 2.08
31 32 2.225293 CCCCCGGGTCTATTCTCTATCA 60.225 54.545 21.85 0.00 0.00 2.15
32 33 3.566775 CCCCCGGGTCTATTCTCTATCAT 60.567 52.174 21.85 0.00 0.00 2.45
33 34 4.325895 CCCCCGGGTCTATTCTCTATCATA 60.326 50.000 21.85 0.00 0.00 2.15
34 35 5.459505 CCCCGGGTCTATTCTCTATCATAT 58.540 45.833 21.85 0.00 0.00 1.78
35 36 5.900123 CCCCGGGTCTATTCTCTATCATATT 59.100 44.000 21.85 0.00 0.00 1.28
36 37 7.067421 CCCCGGGTCTATTCTCTATCATATTA 58.933 42.308 21.85 0.00 0.00 0.98
37 38 7.563924 CCCCGGGTCTATTCTCTATCATATTAA 59.436 40.741 21.85 0.00 0.00 1.40
38 39 9.148879 CCCGGGTCTATTCTCTATCATATTAAT 57.851 37.037 14.18 0.00 0.00 1.40
62 63 9.822185 AATCTACCGTTATTTCTATTACCGTTT 57.178 29.630 0.00 0.00 0.00 3.60
81 82 8.936070 ACCGTTTATTTTGCTTTCTTTACTTT 57.064 26.923 0.00 0.00 0.00 2.66
82 83 9.373603 ACCGTTTATTTTGCTTTCTTTACTTTT 57.626 25.926 0.00 0.00 0.00 2.27
137 138 7.836479 ATCTTGTCATCTCTATCACATCTCA 57.164 36.000 0.00 0.00 0.00 3.27
138 139 7.036996 TCTTGTCATCTCTATCACATCTCAC 57.963 40.000 0.00 0.00 0.00 3.51
139 140 6.832900 TCTTGTCATCTCTATCACATCTCACT 59.167 38.462 0.00 0.00 0.00 3.41
140 141 7.341512 TCTTGTCATCTCTATCACATCTCACTT 59.658 37.037 0.00 0.00 0.00 3.16
141 142 7.415592 TGTCATCTCTATCACATCTCACTTT 57.584 36.000 0.00 0.00 0.00 2.66
142 143 7.845037 TGTCATCTCTATCACATCTCACTTTT 58.155 34.615 0.00 0.00 0.00 2.27
143 144 7.763071 TGTCATCTCTATCACATCTCACTTTTG 59.237 37.037 0.00 0.00 0.00 2.44
144 145 6.760298 TCATCTCTATCACATCTCACTTTTGC 59.240 38.462 0.00 0.00 0.00 3.68
145 146 6.041423 TCTCTATCACATCTCACTTTTGCA 57.959 37.500 0.00 0.00 0.00 4.08
146 147 6.466812 TCTCTATCACATCTCACTTTTGCAA 58.533 36.000 0.00 0.00 0.00 4.08
147 148 6.592994 TCTCTATCACATCTCACTTTTGCAAG 59.407 38.462 0.00 0.00 35.92 4.01
148 149 6.233434 TCTATCACATCTCACTTTTGCAAGT 58.767 36.000 0.00 0.00 44.72 3.16
154 155 3.933515 ACTTTTGCAAGTGGCCGT 58.066 50.000 0.00 0.00 42.05 5.68
155 156 1.437160 ACTTTTGCAAGTGGCCGTG 59.563 52.632 0.00 0.00 42.05 4.94
156 157 1.034838 ACTTTTGCAAGTGGCCGTGA 61.035 50.000 0.00 0.00 42.05 4.35
157 158 0.102120 CTTTTGCAAGTGGCCGTGAA 59.898 50.000 0.00 0.00 43.89 3.18
158 159 0.102120 TTTTGCAAGTGGCCGTGAAG 59.898 50.000 0.00 0.00 43.89 3.02
159 160 1.733402 TTTGCAAGTGGCCGTGAAGG 61.733 55.000 0.00 0.00 43.89 3.46
160 161 3.365265 GCAAGTGGCCGTGAAGGG 61.365 66.667 0.00 0.00 41.48 3.95
161 162 2.429930 CAAGTGGCCGTGAAGGGA 59.570 61.111 0.00 0.00 41.48 4.20
162 163 1.002134 CAAGTGGCCGTGAAGGGAT 60.002 57.895 0.00 0.00 41.48 3.85
163 164 0.609131 CAAGTGGCCGTGAAGGGATT 60.609 55.000 0.00 0.00 41.48 3.01
164 165 0.609131 AAGTGGCCGTGAAGGGATTG 60.609 55.000 0.00 0.00 41.48 2.67
165 166 1.002624 GTGGCCGTGAAGGGATTGA 60.003 57.895 0.00 0.00 41.48 2.57
166 167 1.002624 TGGCCGTGAAGGGATTGAC 60.003 57.895 0.00 0.00 41.48 3.18
167 168 1.002624 GGCCGTGAAGGGATTGACA 60.003 57.895 0.00 0.00 41.48 3.58
168 169 0.608035 GGCCGTGAAGGGATTGACAA 60.608 55.000 0.00 0.00 41.48 3.18
169 170 1.243902 GCCGTGAAGGGATTGACAAA 58.756 50.000 0.00 0.00 41.48 2.83
170 171 1.068541 GCCGTGAAGGGATTGACAAAC 60.069 52.381 0.00 0.00 41.48 2.93
171 172 1.539827 CCGTGAAGGGATTGACAAACC 59.460 52.381 5.94 5.94 35.97 3.27
172 173 1.539827 CGTGAAGGGATTGACAAACCC 59.460 52.381 22.79 22.79 43.55 4.11
180 181 5.324784 GGGATTGACAAACCCTTTATCAC 57.675 43.478 22.93 0.00 40.39 3.06
181 182 4.142469 GGGATTGACAAACCCTTTATCACG 60.142 45.833 22.93 0.00 40.39 4.35
182 183 4.457949 GGATTGACAAACCCTTTATCACGT 59.542 41.667 3.10 0.00 0.00 4.49
183 184 5.048294 GGATTGACAAACCCTTTATCACGTT 60.048 40.000 3.10 0.00 0.00 3.99
184 185 4.822036 TGACAAACCCTTTATCACGTTG 57.178 40.909 0.00 0.00 0.00 4.10
185 186 3.566322 TGACAAACCCTTTATCACGTTGG 59.434 43.478 0.00 0.00 0.00 3.77
186 187 3.558033 ACAAACCCTTTATCACGTTGGT 58.442 40.909 0.00 0.00 0.00 3.67
187 188 3.955551 ACAAACCCTTTATCACGTTGGTT 59.044 39.130 0.00 0.00 37.68 3.67
188 189 4.202070 ACAAACCCTTTATCACGTTGGTTG 60.202 41.667 0.00 0.00 36.29 3.77
189 190 1.883926 ACCCTTTATCACGTTGGTTGC 59.116 47.619 0.00 0.00 0.00 4.17
190 191 1.883275 CCCTTTATCACGTTGGTTGCA 59.117 47.619 0.00 0.00 0.00 4.08
191 192 2.294791 CCCTTTATCACGTTGGTTGCAA 59.705 45.455 0.00 0.00 0.00 4.08
192 193 3.564511 CCTTTATCACGTTGGTTGCAAG 58.435 45.455 0.00 0.00 0.00 4.01
193 194 3.564511 CTTTATCACGTTGGTTGCAAGG 58.435 45.455 0.00 0.00 0.00 3.61
194 195 2.264005 TATCACGTTGGTTGCAAGGT 57.736 45.000 0.00 0.00 34.04 3.50
195 196 1.398692 ATCACGTTGGTTGCAAGGTT 58.601 45.000 0.00 0.00 31.77 3.50
196 197 0.736053 TCACGTTGGTTGCAAGGTTC 59.264 50.000 0.00 0.00 31.77 3.62
197 198 0.738389 CACGTTGGTTGCAAGGTTCT 59.262 50.000 0.00 0.00 31.77 3.01
198 199 1.134175 CACGTTGGTTGCAAGGTTCTT 59.866 47.619 0.00 0.00 31.77 2.52
199 200 2.356382 CACGTTGGTTGCAAGGTTCTTA 59.644 45.455 0.00 0.00 31.77 2.10
200 201 3.004315 CACGTTGGTTGCAAGGTTCTTAT 59.996 43.478 0.00 0.00 31.77 1.73
201 202 3.634910 ACGTTGGTTGCAAGGTTCTTATT 59.365 39.130 0.00 0.00 30.15 1.40
202 203 4.098807 ACGTTGGTTGCAAGGTTCTTATTT 59.901 37.500 0.00 0.00 30.15 1.40
203 204 5.047188 CGTTGGTTGCAAGGTTCTTATTTT 58.953 37.500 0.00 0.00 0.00 1.82
204 205 5.522097 CGTTGGTTGCAAGGTTCTTATTTTT 59.478 36.000 0.00 0.00 0.00 1.94
220 221 3.802862 TTTTTGTAGGTGCGTGGGA 57.197 47.368 0.00 0.00 0.00 4.37
221 222 1.310904 TTTTTGTAGGTGCGTGGGAC 58.689 50.000 0.00 0.00 0.00 4.46
222 223 0.470766 TTTTGTAGGTGCGTGGGACT 59.529 50.000 0.00 0.00 0.00 3.85
223 224 0.470766 TTTGTAGGTGCGTGGGACTT 59.529 50.000 0.00 0.00 0.00 3.01
224 225 0.250124 TTGTAGGTGCGTGGGACTTG 60.250 55.000 0.00 0.00 0.00 3.16
225 226 1.116536 TGTAGGTGCGTGGGACTTGA 61.117 55.000 0.00 0.00 0.00 3.02
226 227 0.389948 GTAGGTGCGTGGGACTTGAG 60.390 60.000 0.00 0.00 0.00 3.02
227 228 2.167398 TAGGTGCGTGGGACTTGAGC 62.167 60.000 0.00 0.00 0.00 4.26
228 229 3.414700 GTGCGTGGGACTTGAGCG 61.415 66.667 0.00 0.00 0.00 5.03
229 230 3.923864 TGCGTGGGACTTGAGCGT 61.924 61.111 0.00 0.00 0.00 5.07
230 231 3.414700 GCGTGGGACTTGAGCGTG 61.415 66.667 0.00 0.00 0.00 5.34
231 232 2.738521 CGTGGGACTTGAGCGTGG 60.739 66.667 0.00 0.00 0.00 4.94
232 233 2.426023 GTGGGACTTGAGCGTGGT 59.574 61.111 0.00 0.00 0.00 4.16
233 234 1.668151 GTGGGACTTGAGCGTGGTC 60.668 63.158 0.00 0.00 0.00 4.02
234 235 1.837051 TGGGACTTGAGCGTGGTCT 60.837 57.895 0.39 0.00 0.00 3.85
235 236 1.079750 GGGACTTGAGCGTGGTCTC 60.080 63.158 0.39 0.00 0.00 3.36
236 237 1.079750 GGACTTGAGCGTGGTCTCC 60.080 63.158 0.39 0.00 32.22 3.71
237 238 1.536943 GGACTTGAGCGTGGTCTCCT 61.537 60.000 0.39 0.00 32.22 3.69
238 239 1.174783 GACTTGAGCGTGGTCTCCTA 58.825 55.000 0.39 0.00 32.22 2.94
239 240 0.889306 ACTTGAGCGTGGTCTCCTAC 59.111 55.000 0.39 0.00 32.22 3.18
240 241 1.178276 CTTGAGCGTGGTCTCCTACT 58.822 55.000 0.39 0.00 32.22 2.57
241 242 0.888619 TTGAGCGTGGTCTCCTACTG 59.111 55.000 0.39 0.00 32.22 2.74
242 243 0.965866 TGAGCGTGGTCTCCTACTGG 60.966 60.000 0.39 0.00 32.22 4.00
243 244 0.680280 GAGCGTGGTCTCCTACTGGA 60.680 60.000 0.00 0.00 40.69 3.86
244 245 0.033011 AGCGTGGTCTCCTACTGGAT 60.033 55.000 0.00 0.00 42.29 3.41
245 246 0.824759 GCGTGGTCTCCTACTGGATT 59.175 55.000 0.00 0.00 42.29 3.01
246 247 1.202428 GCGTGGTCTCCTACTGGATTC 60.202 57.143 0.00 0.00 42.29 2.52
247 248 1.065701 CGTGGTCTCCTACTGGATTCG 59.934 57.143 0.00 0.00 42.29 3.34
248 249 2.100989 GTGGTCTCCTACTGGATTCGT 58.899 52.381 0.00 0.00 42.29 3.85
249 250 3.285484 GTGGTCTCCTACTGGATTCGTA 58.715 50.000 0.00 0.00 42.29 3.43
250 251 3.066481 GTGGTCTCCTACTGGATTCGTAC 59.934 52.174 0.00 0.00 42.29 3.67
251 252 2.622470 GGTCTCCTACTGGATTCGTACC 59.378 54.545 0.00 0.00 42.29 3.34
252 253 3.553904 GTCTCCTACTGGATTCGTACCT 58.446 50.000 0.00 0.00 42.29 3.08
253 254 3.952967 GTCTCCTACTGGATTCGTACCTT 59.047 47.826 0.00 0.00 42.29 3.50
254 255 3.952323 TCTCCTACTGGATTCGTACCTTG 59.048 47.826 0.00 0.00 42.29 3.61
255 256 3.028850 TCCTACTGGATTCGTACCTTGG 58.971 50.000 0.00 0.00 37.46 3.61
256 257 2.764572 CCTACTGGATTCGTACCTTGGT 59.235 50.000 0.00 0.00 34.57 3.67
257 258 3.197116 CCTACTGGATTCGTACCTTGGTT 59.803 47.826 0.00 0.00 34.57 3.67
258 259 3.329929 ACTGGATTCGTACCTTGGTTC 57.670 47.619 0.00 0.00 0.00 3.62
259 260 2.904434 ACTGGATTCGTACCTTGGTTCT 59.096 45.455 0.00 0.00 0.00 3.01
260 261 3.056035 ACTGGATTCGTACCTTGGTTCTC 60.056 47.826 0.00 0.00 0.00 2.87
261 262 2.094390 TGGATTCGTACCTTGGTTCTCG 60.094 50.000 0.00 1.99 0.00 4.04
262 263 2.165030 GGATTCGTACCTTGGTTCTCGA 59.835 50.000 0.00 4.27 0.00 4.04
263 264 3.367703 GGATTCGTACCTTGGTTCTCGAA 60.368 47.826 19.78 19.78 40.50 3.71
264 265 3.731652 TTCGTACCTTGGTTCTCGAAA 57.268 42.857 17.30 7.75 35.08 3.46
265 266 3.017265 TCGTACCTTGGTTCTCGAAAC 57.983 47.619 0.00 0.00 0.00 2.78
266 267 1.717645 CGTACCTTGGTTCTCGAAACG 59.282 52.381 0.00 0.00 0.00 3.60
267 268 2.064014 GTACCTTGGTTCTCGAAACGG 58.936 52.381 0.00 0.00 0.00 4.44
268 269 0.754472 ACCTTGGTTCTCGAAACGGA 59.246 50.000 0.00 0.00 0.00 4.69
269 270 1.270147 ACCTTGGTTCTCGAAACGGAG 60.270 52.381 0.00 0.00 35.32 4.63
270 271 1.429463 CTTGGTTCTCGAAACGGAGG 58.571 55.000 0.00 0.00 34.74 4.30
271 272 0.034337 TTGGTTCTCGAAACGGAGGG 59.966 55.000 0.00 0.00 34.74 4.30
272 273 0.828762 TGGTTCTCGAAACGGAGGGA 60.829 55.000 0.00 0.00 34.74 4.20
273 274 0.319405 GGTTCTCGAAACGGAGGGAA 59.681 55.000 0.00 0.00 34.74 3.97
274 275 1.270465 GGTTCTCGAAACGGAGGGAAA 60.270 52.381 0.00 0.00 34.74 3.13
275 276 2.614734 GGTTCTCGAAACGGAGGGAAAT 60.615 50.000 0.00 0.00 34.74 2.17
276 277 3.368739 GGTTCTCGAAACGGAGGGAAATA 60.369 47.826 0.00 0.00 34.74 1.40
277 278 3.515330 TCTCGAAACGGAGGGAAATAC 57.485 47.619 0.00 0.00 34.74 1.89
278 279 3.094572 TCTCGAAACGGAGGGAAATACT 58.905 45.455 0.00 0.00 34.74 2.12
279 280 3.512724 TCTCGAAACGGAGGGAAATACTT 59.487 43.478 0.00 0.00 34.74 2.24
280 281 4.706476 TCTCGAAACGGAGGGAAATACTTA 59.294 41.667 0.00 0.00 34.74 2.24
281 282 4.747810 TCGAAACGGAGGGAAATACTTAC 58.252 43.478 0.00 0.00 0.00 2.34
282 283 3.549070 CGAAACGGAGGGAAATACTTACG 59.451 47.826 0.00 0.00 0.00 3.18
283 284 2.591571 ACGGAGGGAAATACTTACGC 57.408 50.000 0.00 0.00 0.00 4.42
284 285 2.105766 ACGGAGGGAAATACTTACGCT 58.894 47.619 0.00 0.00 0.00 5.07
285 286 3.290710 ACGGAGGGAAATACTTACGCTA 58.709 45.455 0.00 0.00 0.00 4.26
286 287 3.067320 ACGGAGGGAAATACTTACGCTAC 59.933 47.826 0.00 0.00 0.00 3.58
287 288 3.317430 CGGAGGGAAATACTTACGCTACT 59.683 47.826 0.00 0.00 0.00 2.57
288 289 4.202090 CGGAGGGAAATACTTACGCTACTT 60.202 45.833 0.00 0.00 0.00 2.24
289 290 5.668471 GGAGGGAAATACTTACGCTACTTT 58.332 41.667 0.00 0.00 0.00 2.66
290 291 6.460123 CGGAGGGAAATACTTACGCTACTTTA 60.460 42.308 0.00 0.00 0.00 1.85
291 292 6.699204 GGAGGGAAATACTTACGCTACTTTAC 59.301 42.308 0.00 0.00 0.00 2.01
292 293 7.415592 AGGGAAATACTTACGCTACTTTACT 57.584 36.000 0.00 0.00 0.00 2.24
293 294 7.263496 AGGGAAATACTTACGCTACTTTACTG 58.737 38.462 0.00 0.00 0.00 2.74
294 295 6.019237 GGGAAATACTTACGCTACTTTACTGC 60.019 42.308 0.00 0.00 0.00 4.40
295 296 6.532657 GGAAATACTTACGCTACTTTACTGCA 59.467 38.462 0.00 0.00 0.00 4.41
296 297 7.224167 GGAAATACTTACGCTACTTTACTGCAT 59.776 37.037 0.00 0.00 0.00 3.96
297 298 7.695869 AATACTTACGCTACTTTACTGCATC 57.304 36.000 0.00 0.00 0.00 3.91
298 299 5.068234 ACTTACGCTACTTTACTGCATCA 57.932 39.130 0.00 0.00 0.00 3.07
299 300 4.863131 ACTTACGCTACTTTACTGCATCAC 59.137 41.667 0.00 0.00 0.00 3.06
300 301 2.618053 ACGCTACTTTACTGCATCACC 58.382 47.619 0.00 0.00 0.00 4.02
301 302 1.588404 CGCTACTTTACTGCATCACCG 59.412 52.381 0.00 0.00 0.00 4.94
302 303 2.618053 GCTACTTTACTGCATCACCGT 58.382 47.619 0.00 0.00 0.00 4.83
303 304 3.000727 GCTACTTTACTGCATCACCGTT 58.999 45.455 0.00 0.00 0.00 4.44
304 305 3.435671 GCTACTTTACTGCATCACCGTTT 59.564 43.478 0.00 0.00 0.00 3.60
305 306 4.435651 GCTACTTTACTGCATCACCGTTTC 60.436 45.833 0.00 0.00 0.00 2.78
306 307 2.812011 ACTTTACTGCATCACCGTTTCC 59.188 45.455 0.00 0.00 0.00 3.13
307 308 2.851263 TTACTGCATCACCGTTTCCT 57.149 45.000 0.00 0.00 0.00 3.36
308 309 2.380084 TACTGCATCACCGTTTCCTC 57.620 50.000 0.00 0.00 0.00 3.71
309 310 0.687354 ACTGCATCACCGTTTCCTCT 59.313 50.000 0.00 0.00 0.00 3.69
310 311 1.072331 ACTGCATCACCGTTTCCTCTT 59.928 47.619 0.00 0.00 0.00 2.85
311 312 1.734465 CTGCATCACCGTTTCCTCTTC 59.266 52.381 0.00 0.00 0.00 2.87
312 313 1.071542 TGCATCACCGTTTCCTCTTCA 59.928 47.619 0.00 0.00 0.00 3.02
313 314 2.151202 GCATCACCGTTTCCTCTTCAA 58.849 47.619 0.00 0.00 0.00 2.69
314 315 2.160417 GCATCACCGTTTCCTCTTCAAG 59.840 50.000 0.00 0.00 0.00 3.02
316 317 1.071699 TCACCGTTTCCTCTTCAAGGG 59.928 52.381 0.00 0.00 46.23 3.95
317 318 1.071699 CACCGTTTCCTCTTCAAGGGA 59.928 52.381 0.00 0.00 46.23 4.20
318 319 1.772453 ACCGTTTCCTCTTCAAGGGAA 59.228 47.619 3.83 3.83 46.23 3.97
319 320 2.173996 ACCGTTTCCTCTTCAAGGGAAA 59.826 45.455 13.32 13.32 44.78 3.13
320 321 3.219281 CCGTTTCCTCTTCAAGGGAAAA 58.781 45.455 17.09 0.00 44.78 2.29
321 322 3.004419 CCGTTTCCTCTTCAAGGGAAAAC 59.996 47.826 17.09 5.49 44.78 2.43
322 323 3.004419 CGTTTCCTCTTCAAGGGAAAACC 59.996 47.826 17.09 8.72 44.78 3.27
323 324 3.958147 GTTTCCTCTTCAAGGGAAAACCA 59.042 43.478 17.09 0.00 44.78 3.67
324 325 3.963476 TCCTCTTCAAGGGAAAACCAA 57.037 42.857 0.00 0.00 46.23 3.67
325 326 3.562182 TCCTCTTCAAGGGAAAACCAAC 58.438 45.455 0.00 0.00 46.23 3.77
326 327 2.293399 CCTCTTCAAGGGAAAACCAACG 59.707 50.000 0.00 0.00 42.03 4.10
327 328 1.679153 TCTTCAAGGGAAAACCAACGC 59.321 47.619 0.00 0.00 43.89 4.84
328 329 1.407258 CTTCAAGGGAAAACCAACGCA 59.593 47.619 0.00 0.00 43.89 5.24
329 330 1.028905 TCAAGGGAAAACCAACGCAG 58.971 50.000 0.00 0.00 43.89 5.18
330 331 0.744281 CAAGGGAAAACCAACGCAGT 59.256 50.000 0.00 0.00 43.89 4.40
331 332 0.744281 AAGGGAAAACCAACGCAGTG 59.256 50.000 0.00 0.00 40.90 3.66
332 333 1.299850 GGGAAAACCAACGCAGTGC 60.300 57.895 4.58 4.58 45.00 4.40
333 334 1.733526 GGAAAACCAACGCAGTGCT 59.266 52.632 14.33 0.00 45.00 4.40
334 335 0.317854 GGAAAACCAACGCAGTGCTC 60.318 55.000 14.33 0.60 45.00 4.26
335 336 0.380378 GAAAACCAACGCAGTGCTCA 59.620 50.000 14.33 0.00 45.00 4.26
336 337 0.814457 AAAACCAACGCAGTGCTCAA 59.186 45.000 14.33 0.00 45.00 3.02
337 338 0.381801 AAACCAACGCAGTGCTCAAG 59.618 50.000 14.33 0.00 45.00 3.02
338 339 0.463654 AACCAACGCAGTGCTCAAGA 60.464 50.000 14.33 0.00 45.00 3.02
339 340 0.882042 ACCAACGCAGTGCTCAAGAG 60.882 55.000 14.33 0.00 45.00 2.85
340 341 1.572085 CCAACGCAGTGCTCAAGAGG 61.572 60.000 14.33 2.70 45.00 3.69
341 342 0.882042 CAACGCAGTGCTCAAGAGGT 60.882 55.000 14.33 0.00 45.00 3.85
342 343 0.679505 AACGCAGTGCTCAAGAGGTA 59.320 50.000 14.33 0.00 45.00 3.08
343 344 0.244994 ACGCAGTGCTCAAGAGGTAG 59.755 55.000 14.33 0.00 42.51 3.18
344 345 1.080995 CGCAGTGCTCAAGAGGTAGC 61.081 60.000 14.33 0.00 39.25 3.58
345 346 0.036952 GCAGTGCTCAAGAGGTAGCA 60.037 55.000 8.18 0.00 46.11 3.49
348 349 3.914984 TGCTCAAGAGGTAGCACAC 57.085 52.632 0.00 0.00 43.56 3.82
349 350 1.047801 TGCTCAAGAGGTAGCACACA 58.952 50.000 0.00 0.00 43.56 3.72
350 351 1.270305 TGCTCAAGAGGTAGCACACAC 60.270 52.381 0.00 0.00 43.56 3.82
351 352 1.941668 GCTCAAGAGGTAGCACACACC 60.942 57.143 0.00 0.00 38.63 4.16
352 353 1.344438 CTCAAGAGGTAGCACACACCA 59.656 52.381 0.00 0.00 38.62 4.17
353 354 1.765904 TCAAGAGGTAGCACACACCAA 59.234 47.619 0.00 0.00 38.62 3.67
354 355 2.146342 CAAGAGGTAGCACACACCAAG 58.854 52.381 0.00 0.00 38.62 3.61
355 356 0.687354 AGAGGTAGCACACACCAAGG 59.313 55.000 0.00 0.00 38.62 3.61
356 357 0.321653 GAGGTAGCACACACCAAGGG 60.322 60.000 0.00 0.00 38.62 3.95
357 358 1.060163 AGGTAGCACACACCAAGGGT 61.060 55.000 0.00 0.00 38.62 4.34
372 373 4.338710 GGTGCGCCCCAACCACTA 62.339 66.667 3.18 0.00 0.00 2.74
373 374 2.281900 GTGCGCCCCAACCACTAA 60.282 61.111 4.18 0.00 0.00 2.24
374 375 1.677633 GTGCGCCCCAACCACTAAT 60.678 57.895 4.18 0.00 0.00 1.73
375 376 1.075836 TGCGCCCCAACCACTAATT 59.924 52.632 4.18 0.00 0.00 1.40
376 377 0.540830 TGCGCCCCAACCACTAATTT 60.541 50.000 4.18 0.00 0.00 1.82
377 378 0.606096 GCGCCCCAACCACTAATTTT 59.394 50.000 0.00 0.00 0.00 1.82
378 379 1.001520 GCGCCCCAACCACTAATTTTT 59.998 47.619 0.00 0.00 0.00 1.94
397 398 5.730296 TTTTTGTCAAACAAGGAGAACCA 57.270 34.783 0.00 0.00 39.53 3.67
398 399 5.930837 TTTTGTCAAACAAGGAGAACCAT 57.069 34.783 0.00 0.00 39.53 3.55
399 400 7.411486 TTTTTGTCAAACAAGGAGAACCATA 57.589 32.000 0.00 0.00 39.53 2.74
400 401 7.595819 TTTTGTCAAACAAGGAGAACCATAT 57.404 32.000 0.00 0.00 39.53 1.78
401 402 6.573664 TTGTCAAACAAGGAGAACCATATG 57.426 37.500 0.00 0.00 38.94 1.78
402 403 5.875224 TGTCAAACAAGGAGAACCATATGA 58.125 37.500 3.65 0.00 38.94 2.15
403 404 5.705441 TGTCAAACAAGGAGAACCATATGAC 59.295 40.000 3.65 0.00 38.94 3.06
404 405 5.705441 GTCAAACAAGGAGAACCATATGACA 59.295 40.000 3.65 0.00 38.94 3.58
405 406 6.206634 GTCAAACAAGGAGAACCATATGACAA 59.793 38.462 3.65 0.00 38.94 3.18
406 407 6.206634 TCAAACAAGGAGAACCATATGACAAC 59.793 38.462 3.65 0.00 38.94 3.32
407 408 5.241403 ACAAGGAGAACCATATGACAACA 57.759 39.130 3.65 0.00 38.94 3.33
408 409 5.819991 ACAAGGAGAACCATATGACAACAT 58.180 37.500 3.65 0.00 38.32 2.71
409 410 6.248433 ACAAGGAGAACCATATGACAACATT 58.752 36.000 3.65 0.00 37.00 2.71
410 411 6.151648 ACAAGGAGAACCATATGACAACATTG 59.848 38.462 3.65 8.14 37.00 2.82
411 412 5.195940 AGGAGAACCATATGACAACATTGG 58.804 41.667 3.65 0.00 38.90 3.16
412 413 4.339247 GGAGAACCATATGACAACATTGGG 59.661 45.833 3.65 0.00 38.13 4.12
413 414 4.934356 AGAACCATATGACAACATTGGGT 58.066 39.130 3.65 0.00 40.70 4.51
414 415 5.332743 AGAACCATATGACAACATTGGGTT 58.667 37.500 3.65 13.72 45.42 4.11
415 416 5.779771 AGAACCATATGACAACATTGGGTTT 59.220 36.000 3.65 4.42 44.17 3.27
416 417 6.269769 AGAACCATATGACAACATTGGGTTTT 59.730 34.615 3.65 9.47 44.17 2.43
417 418 6.036577 ACCATATGACAACATTGGGTTTTC 57.963 37.500 3.65 0.00 37.99 2.29
418 419 5.541868 ACCATATGACAACATTGGGTTTTCA 59.458 36.000 3.65 0.00 46.81 2.69
419 420 6.101332 CCATATGACAACATTGGGTTTTCAG 58.899 40.000 3.65 0.00 46.19 3.02
420 421 3.451141 TGACAACATTGGGTTTTCAGC 57.549 42.857 0.00 0.00 40.33 4.26
421 422 2.762887 TGACAACATTGGGTTTTCAGCA 59.237 40.909 0.00 0.00 40.33 4.41
422 423 3.181477 TGACAACATTGGGTTTTCAGCAG 60.181 43.478 0.00 0.00 40.33 4.24
423 424 2.102925 ACAACATTGGGTTTTCAGCAGG 59.897 45.455 0.00 0.00 37.72 4.85
424 425 0.681175 ACATTGGGTTTTCAGCAGGC 59.319 50.000 0.00 0.00 0.00 4.85
425 426 0.971386 CATTGGGTTTTCAGCAGGCT 59.029 50.000 0.00 0.00 0.00 4.58
426 427 2.170166 CATTGGGTTTTCAGCAGGCTA 58.830 47.619 0.00 0.00 0.00 3.93
427 428 1.909700 TTGGGTTTTCAGCAGGCTAG 58.090 50.000 0.00 0.00 0.00 3.42
428 429 0.038166 TGGGTTTTCAGCAGGCTAGG 59.962 55.000 0.00 0.00 0.00 3.02
429 430 0.038310 GGGTTTTCAGCAGGCTAGGT 59.962 55.000 0.00 0.00 0.00 3.08
430 431 1.547901 GGGTTTTCAGCAGGCTAGGTT 60.548 52.381 0.00 0.00 0.00 3.50
431 432 1.813178 GGTTTTCAGCAGGCTAGGTTC 59.187 52.381 0.00 0.00 0.00 3.62
432 433 1.464997 GTTTTCAGCAGGCTAGGTTCG 59.535 52.381 0.00 0.00 0.00 3.95
433 434 0.685097 TTTCAGCAGGCTAGGTTCGT 59.315 50.000 0.00 0.00 0.00 3.85
434 435 1.552578 TTCAGCAGGCTAGGTTCGTA 58.447 50.000 0.00 0.00 0.00 3.43
435 436 1.103803 TCAGCAGGCTAGGTTCGTAG 58.896 55.000 0.00 0.00 0.00 3.51
436 437 0.528684 CAGCAGGCTAGGTTCGTAGC 60.529 60.000 13.82 13.82 44.14 3.58
437 438 0.970937 AGCAGGCTAGGTTCGTAGCA 60.971 55.000 20.68 0.00 46.29 3.49
438 439 0.108329 GCAGGCTAGGTTCGTAGCAA 60.108 55.000 20.68 0.00 46.29 3.91
439 440 1.927895 CAGGCTAGGTTCGTAGCAAG 58.072 55.000 20.68 11.64 46.29 4.01
440 441 0.175989 AGGCTAGGTTCGTAGCAAGC 59.824 55.000 20.68 8.31 46.29 4.01
441 442 0.108329 GGCTAGGTTCGTAGCAAGCA 60.108 55.000 20.68 0.00 46.29 3.91
442 443 1.674817 GGCTAGGTTCGTAGCAAGCAA 60.675 52.381 20.68 0.00 46.29 3.91
443 444 2.280628 GCTAGGTTCGTAGCAAGCAAT 58.719 47.619 16.29 0.00 44.26 3.56
444 445 2.030946 GCTAGGTTCGTAGCAAGCAATG 59.969 50.000 16.29 0.00 44.26 2.82
445 446 2.185004 AGGTTCGTAGCAAGCAATGT 57.815 45.000 0.00 0.00 0.00 2.71
446 447 2.076863 AGGTTCGTAGCAAGCAATGTC 58.923 47.619 0.00 0.00 0.00 3.06
447 448 1.130561 GGTTCGTAGCAAGCAATGTCC 59.869 52.381 0.00 0.00 0.00 4.02
448 449 1.075542 TTCGTAGCAAGCAATGTCCG 58.924 50.000 0.00 0.00 0.00 4.79
449 450 0.037697 TCGTAGCAAGCAATGTCCGT 60.038 50.000 0.00 0.00 0.00 4.69
450 451 0.370273 CGTAGCAAGCAATGTCCGTC 59.630 55.000 0.00 0.00 0.00 4.79
451 452 0.370273 GTAGCAAGCAATGTCCGTCG 59.630 55.000 0.00 0.00 0.00 5.12
452 453 0.245266 TAGCAAGCAATGTCCGTCGA 59.755 50.000 0.00 0.00 0.00 4.20
453 454 1.132640 GCAAGCAATGTCCGTCGAC 59.867 57.895 5.18 5.18 39.66 4.20
454 455 1.291877 GCAAGCAATGTCCGTCGACT 61.292 55.000 14.70 0.00 39.94 4.18
455 456 1.990799 CAAGCAATGTCCGTCGACTA 58.009 50.000 14.70 0.00 39.94 2.59
456 457 2.540515 CAAGCAATGTCCGTCGACTAT 58.459 47.619 14.70 0.00 39.94 2.12
457 458 2.209838 AGCAATGTCCGTCGACTATG 57.790 50.000 14.70 2.05 39.94 2.23
458 459 1.476891 AGCAATGTCCGTCGACTATGT 59.523 47.619 14.70 0.00 39.94 2.29
459 460 1.852895 GCAATGTCCGTCGACTATGTC 59.147 52.381 14.70 0.85 39.94 3.06
460 461 2.479730 GCAATGTCCGTCGACTATGTCT 60.480 50.000 14.70 0.00 39.94 3.41
461 462 3.364062 CAATGTCCGTCGACTATGTCTC 58.636 50.000 14.70 0.00 39.94 3.36
462 463 1.376543 TGTCCGTCGACTATGTCTCC 58.623 55.000 14.70 0.00 39.94 3.71
463 464 1.339342 TGTCCGTCGACTATGTCTCCA 60.339 52.381 14.70 0.00 39.94 3.86
464 465 1.741706 GTCCGTCGACTATGTCTCCAA 59.258 52.381 14.70 0.00 35.99 3.53
465 466 2.163010 GTCCGTCGACTATGTCTCCAAA 59.837 50.000 14.70 0.00 35.99 3.28
466 467 2.163010 TCCGTCGACTATGTCTCCAAAC 59.837 50.000 14.70 0.00 0.00 2.93
467 468 2.094906 CCGTCGACTATGTCTCCAAACA 60.095 50.000 14.70 0.00 0.00 2.83
468 469 3.571571 CGTCGACTATGTCTCCAAACAA 58.428 45.455 14.70 0.00 31.81 2.83
469 470 4.174009 CGTCGACTATGTCTCCAAACAAT 58.826 43.478 14.70 0.00 31.81 2.71
470 471 4.625742 CGTCGACTATGTCTCCAAACAATT 59.374 41.667 14.70 0.00 31.81 2.32
471 472 5.803461 CGTCGACTATGTCTCCAAACAATTA 59.197 40.000 14.70 0.00 31.81 1.40
472 473 6.309494 CGTCGACTATGTCTCCAAACAATTAA 59.691 38.462 14.70 0.00 31.81 1.40
473 474 7.462856 CGTCGACTATGTCTCCAAACAATTAAG 60.463 40.741 14.70 0.00 31.81 1.85
474 475 6.816640 TCGACTATGTCTCCAAACAATTAAGG 59.183 38.462 0.00 0.00 31.81 2.69
475 476 6.816640 CGACTATGTCTCCAAACAATTAAGGA 59.183 38.462 0.00 0.00 31.81 3.36
476 477 7.333423 CGACTATGTCTCCAAACAATTAAGGAA 59.667 37.037 0.00 0.00 31.81 3.36
477 478 8.567285 ACTATGTCTCCAAACAATTAAGGAAG 57.433 34.615 0.00 0.00 31.81 3.46
478 479 8.383175 ACTATGTCTCCAAACAATTAAGGAAGA 58.617 33.333 0.00 0.00 31.81 2.87
479 480 7.693969 ATGTCTCCAAACAATTAAGGAAGAG 57.306 36.000 0.00 0.00 31.81 2.85
480 481 6.003950 TGTCTCCAAACAATTAAGGAAGAGG 58.996 40.000 0.00 0.00 0.00 3.69
481 482 5.416013 GTCTCCAAACAATTAAGGAAGAGGG 59.584 44.000 0.00 0.00 0.00 4.30
482 483 5.074515 TCTCCAAACAATTAAGGAAGAGGGT 59.925 40.000 0.00 0.00 0.00 4.34
483 484 5.076873 TCCAAACAATTAAGGAAGAGGGTG 58.923 41.667 0.00 0.00 0.00 4.61
484 485 4.832823 CCAAACAATTAAGGAAGAGGGTGT 59.167 41.667 0.00 0.00 0.00 4.16
485 486 5.048013 CCAAACAATTAAGGAAGAGGGTGTC 60.048 44.000 0.00 0.00 0.00 3.67
486 487 4.993705 ACAATTAAGGAAGAGGGTGTCA 57.006 40.909 0.00 0.00 0.00 3.58
487 488 5.319043 ACAATTAAGGAAGAGGGTGTCAA 57.681 39.130 0.00 0.00 0.00 3.18
488 489 5.316987 ACAATTAAGGAAGAGGGTGTCAAG 58.683 41.667 0.00 0.00 0.00 3.02
489 490 3.418684 TTAAGGAAGAGGGTGTCAAGC 57.581 47.619 0.00 0.00 0.00 4.01
490 491 1.140312 AAGGAAGAGGGTGTCAAGCA 58.860 50.000 0.00 0.00 0.00 3.91
491 492 1.366319 AGGAAGAGGGTGTCAAGCAT 58.634 50.000 0.00 0.00 0.00 3.79
492 493 2.551270 AGGAAGAGGGTGTCAAGCATA 58.449 47.619 0.00 0.00 0.00 3.14
493 494 3.118531 AGGAAGAGGGTGTCAAGCATAT 58.881 45.455 0.00 0.00 0.00 1.78
494 495 3.118112 AGGAAGAGGGTGTCAAGCATATG 60.118 47.826 0.00 0.00 0.00 1.78
495 496 2.338577 AGAGGGTGTCAAGCATATGC 57.661 50.000 20.36 20.36 42.49 3.14
496 497 1.133976 AGAGGGTGTCAAGCATATGCC 60.134 52.381 23.96 9.30 43.38 4.40
497 498 0.625316 AGGGTGTCAAGCATATGCCA 59.375 50.000 23.96 11.91 43.38 4.92
498 499 1.005805 AGGGTGTCAAGCATATGCCAA 59.994 47.619 23.96 7.11 43.38 4.52
499 500 1.134946 GGGTGTCAAGCATATGCCAAC 59.865 52.381 23.96 16.41 43.38 3.77
500 501 1.134946 GGTGTCAAGCATATGCCAACC 59.865 52.381 23.96 18.64 43.38 3.77
501 502 1.818060 GTGTCAAGCATATGCCAACCA 59.182 47.619 23.96 13.02 43.38 3.67
502 503 2.428171 GTGTCAAGCATATGCCAACCAT 59.572 45.455 23.96 1.16 43.38 3.55
503 504 2.427812 TGTCAAGCATATGCCAACCATG 59.572 45.455 23.96 13.04 43.38 3.66
504 505 1.409790 TCAAGCATATGCCAACCATGC 59.590 47.619 23.96 0.00 44.29 4.06
505 506 1.137282 CAAGCATATGCCAACCATGCA 59.863 47.619 23.96 0.00 45.95 3.96
506 507 0.748450 AGCATATGCCAACCATGCAC 59.252 50.000 23.96 0.00 45.95 4.57
507 508 0.460722 GCATATGCCAACCATGCACA 59.539 50.000 17.26 0.00 43.59 4.57
508 509 1.803625 GCATATGCCAACCATGCACAC 60.804 52.381 17.26 0.00 43.59 3.82
509 510 1.113788 ATATGCCAACCATGCACACC 58.886 50.000 0.00 0.00 42.38 4.16
510 511 0.251519 TATGCCAACCATGCACACCA 60.252 50.000 0.00 0.00 42.38 4.17
511 512 1.120184 ATGCCAACCATGCACACCAA 61.120 50.000 0.00 0.00 42.38 3.67
512 513 1.120184 TGCCAACCATGCACACCAAT 61.120 50.000 0.00 0.00 32.85 3.16
513 514 0.894141 GCCAACCATGCACACCAATA 59.106 50.000 0.00 0.00 0.00 1.90
514 515 1.481772 GCCAACCATGCACACCAATAT 59.518 47.619 0.00 0.00 0.00 1.28
515 516 2.481795 GCCAACCATGCACACCAATATC 60.482 50.000 0.00 0.00 0.00 1.63
516 517 3.025978 CCAACCATGCACACCAATATCT 58.974 45.455 0.00 0.00 0.00 1.98
517 518 4.206375 CCAACCATGCACACCAATATCTA 58.794 43.478 0.00 0.00 0.00 1.98
518 519 4.276678 CCAACCATGCACACCAATATCTAG 59.723 45.833 0.00 0.00 0.00 2.43
519 520 5.125356 CAACCATGCACACCAATATCTAGA 58.875 41.667 0.00 0.00 0.00 2.43
520 521 5.573380 ACCATGCACACCAATATCTAGAT 57.427 39.130 10.73 10.73 0.00 1.98
521 522 5.555017 ACCATGCACACCAATATCTAGATC 58.445 41.667 8.95 0.00 0.00 2.75
522 523 4.940046 CCATGCACACCAATATCTAGATCC 59.060 45.833 8.95 0.00 0.00 3.36
523 524 5.513614 CCATGCACACCAATATCTAGATCCA 60.514 44.000 8.95 0.00 0.00 3.41
524 525 5.628797 TGCACACCAATATCTAGATCCAA 57.371 39.130 8.95 0.00 0.00 3.53
525 526 5.614308 TGCACACCAATATCTAGATCCAAG 58.386 41.667 8.95 0.00 0.00 3.61
526 527 4.453819 GCACACCAATATCTAGATCCAAGC 59.546 45.833 8.95 0.84 0.00 4.01
527 528 5.614308 CACACCAATATCTAGATCCAAGCA 58.386 41.667 8.95 0.00 0.00 3.91
528 529 5.699915 CACACCAATATCTAGATCCAAGCAG 59.300 44.000 8.95 0.00 0.00 4.24
529 530 4.694509 CACCAATATCTAGATCCAAGCAGC 59.305 45.833 8.95 0.00 0.00 5.25
530 531 4.596643 ACCAATATCTAGATCCAAGCAGCT 59.403 41.667 8.95 0.00 0.00 4.24
531 532 4.936411 CCAATATCTAGATCCAAGCAGCTG 59.064 45.833 8.95 10.11 0.00 4.24
532 533 5.279859 CCAATATCTAGATCCAAGCAGCTGA 60.280 44.000 20.43 0.00 0.00 4.26
533 534 6.228995 CAATATCTAGATCCAAGCAGCTGAA 58.771 40.000 20.43 0.00 0.00 3.02
534 535 4.767578 ATCTAGATCCAAGCAGCTGAAA 57.232 40.909 20.43 0.00 0.00 2.69
535 536 3.866651 TCTAGATCCAAGCAGCTGAAAC 58.133 45.455 20.43 0.00 0.00 2.78
536 537 2.574006 AGATCCAAGCAGCTGAAACA 57.426 45.000 20.43 0.00 0.00 2.83
537 538 2.867624 AGATCCAAGCAGCTGAAACAA 58.132 42.857 20.43 0.00 0.00 2.83
538 539 2.555757 AGATCCAAGCAGCTGAAACAAC 59.444 45.455 20.43 0.00 0.00 3.32
539 540 0.662619 TCCAAGCAGCTGAAACAACG 59.337 50.000 20.43 0.00 0.00 4.10
540 541 0.662619 CCAAGCAGCTGAAACAACGA 59.337 50.000 20.43 0.00 0.00 3.85
541 542 1.065401 CCAAGCAGCTGAAACAACGAA 59.935 47.619 20.43 0.00 0.00 3.85
542 543 2.378806 CAAGCAGCTGAAACAACGAAG 58.621 47.619 20.43 0.00 0.00 3.79
543 544 1.953559 AGCAGCTGAAACAACGAAGA 58.046 45.000 20.43 0.00 0.00 2.87
544 545 1.599542 AGCAGCTGAAACAACGAAGAC 59.400 47.619 20.43 0.00 0.00 3.01
545 546 1.334149 GCAGCTGAAACAACGAAGACC 60.334 52.381 20.43 0.00 0.00 3.85
546 547 2.213499 CAGCTGAAACAACGAAGACCT 58.787 47.619 8.42 0.00 0.00 3.85
547 548 2.614057 CAGCTGAAACAACGAAGACCTT 59.386 45.455 8.42 0.00 0.00 3.50
548 549 2.872858 AGCTGAAACAACGAAGACCTTC 59.127 45.455 0.00 0.00 36.29 3.46
549 550 2.872858 GCTGAAACAACGAAGACCTTCT 59.127 45.455 8.00 0.00 37.44 2.85
550 551 3.312697 GCTGAAACAACGAAGACCTTCTT 59.687 43.478 8.00 0.00 39.87 2.52
551 552 4.510340 GCTGAAACAACGAAGACCTTCTTA 59.490 41.667 8.00 0.00 36.73 2.10
552 553 5.558463 GCTGAAACAACGAAGACCTTCTTAC 60.558 44.000 8.00 0.00 36.73 2.34
553 554 5.421277 TGAAACAACGAAGACCTTCTTACA 58.579 37.500 8.00 0.00 36.73 2.41
554 555 5.875910 TGAAACAACGAAGACCTTCTTACAA 59.124 36.000 8.00 0.00 36.73 2.41
555 556 5.729974 AACAACGAAGACCTTCTTACAAC 57.270 39.130 8.00 0.00 36.73 3.32
556 557 4.124970 ACAACGAAGACCTTCTTACAACC 58.875 43.478 8.00 0.00 36.73 3.77
557 558 3.022607 ACGAAGACCTTCTTACAACCG 57.977 47.619 8.00 0.00 36.73 4.44
558 559 2.288640 ACGAAGACCTTCTTACAACCGG 60.289 50.000 0.00 0.00 36.73 5.28
559 560 2.696506 GAAGACCTTCTTACAACCGGG 58.303 52.381 6.32 0.00 36.73 5.73
560 561 2.019807 AGACCTTCTTACAACCGGGA 57.980 50.000 6.32 0.00 0.00 5.14
561 562 1.622312 AGACCTTCTTACAACCGGGAC 59.378 52.381 6.32 0.00 0.00 4.46
562 563 0.689055 ACCTTCTTACAACCGGGACC 59.311 55.000 6.32 0.00 0.00 4.46
563 564 0.035725 CCTTCTTACAACCGGGACCC 60.036 60.000 6.32 0.00 0.00 4.46
564 565 0.688487 CTTCTTACAACCGGGACCCA 59.312 55.000 12.15 0.00 0.00 4.51
565 566 0.688487 TTCTTACAACCGGGACCCAG 59.312 55.000 12.15 0.51 0.00 4.45
566 567 0.472352 TCTTACAACCGGGACCCAGT 60.472 55.000 12.15 1.35 0.00 4.00
567 568 0.036671 CTTACAACCGGGACCCAGTC 60.037 60.000 12.15 0.00 0.00 3.51
568 569 0.763604 TTACAACCGGGACCCAGTCA 60.764 55.000 12.15 0.00 33.68 3.41
569 570 0.545787 TACAACCGGGACCCAGTCAT 60.546 55.000 12.15 0.00 33.68 3.06
570 571 1.378762 CAACCGGGACCCAGTCATT 59.621 57.895 12.15 0.00 33.68 2.57
571 572 0.676782 CAACCGGGACCCAGTCATTC 60.677 60.000 12.15 0.00 33.68 2.67
769 770 5.419155 AGAGACGGACAATTCTATTCAGACA 59.581 40.000 0.00 0.00 0.00 3.41
777 778 5.764686 ACAATTCTATTCAGACAGTTGCACA 59.235 36.000 0.00 0.00 0.00 4.57
917 994 4.023279 CGAGAGAGAGAGAGAGAGAGAGAG 60.023 54.167 0.00 0.00 0.00 3.20
963 1042 1.268283 GGAAGCTAGCTGTGGAGGGT 61.268 60.000 20.16 0.00 0.00 4.34
1128 1237 0.321671 CTCACACACCGAGGAACCAT 59.678 55.000 0.00 0.00 0.00 3.55
1183 1292 1.488390 AAGAATCGGGGCAATTGCAT 58.512 45.000 30.32 13.52 44.36 3.96
1240 1351 2.929641 TCTGTTTGGTGTTCATGCAGA 58.070 42.857 0.00 0.00 35.60 4.26
1406 1517 0.808125 CGCACTGACAGAGAGCTAGT 59.192 55.000 10.08 0.00 36.21 2.57
1512 1623 5.772004 TGGGCATTTGTAGGTATGGTAATT 58.228 37.500 0.00 0.00 0.00 1.40
1777 1893 3.117738 CCTCTATGGGCCAAATTCAGAGT 60.118 47.826 11.89 0.00 0.00 3.24
1805 1921 4.672587 CCAAGTGCAGGCTAGACTAATA 57.327 45.455 0.00 0.00 0.00 0.98
1917 2035 4.799564 TGCTGAAACTTTTTGTGGAAGT 57.200 36.364 0.00 0.00 38.92 3.01
1942 2060 9.651913 GTTAATTGAATTATTCCAGAGCCAAAA 57.348 29.630 2.22 0.00 0.00 2.44
2038 2159 7.598493 CACCGTGATTTAAATCAAAGACCAAAT 59.402 33.333 28.02 6.87 46.13 2.32
2041 2162 7.951565 CGTGATTTAAATCAAAGACCAAATTGC 59.048 33.333 28.02 12.66 46.13 3.56
2225 2348 1.611491 CATGGGTTTGTGGCGTTTAGT 59.389 47.619 0.00 0.00 0.00 2.24
2231 2354 1.095600 TTGTGGCGTTTAGTGTTGCA 58.904 45.000 0.00 0.00 0.00 4.08
2266 2389 4.904241 AGGACAGATGGAAAGACTTTGAG 58.096 43.478 4.85 0.00 0.00 3.02
2346 2470 4.842574 AGTGGTTTTCCTTTGTTTTGCAT 58.157 34.783 0.00 0.00 41.38 3.96
2430 2562 4.041198 CACTTGGTTTAGGGTTAGAGTGGA 59.959 45.833 0.00 0.00 31.96 4.02
2455 2587 7.534723 ACTTGGTTTAGGATTTAAAGGGAAC 57.465 36.000 0.00 0.00 0.00 3.62
2522 2660 2.034048 GCTTCTCACCCCCTCCGATC 62.034 65.000 0.00 0.00 0.00 3.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.425925 CCCGGGGGCCATAGGTTT 61.426 66.667 14.71 0.00 0.00 3.27
1 2 4.771745 ACCCGGGGGCCATAGGTT 62.772 66.667 27.92 0.00 39.32 3.50
3 4 2.765705 ATAGACCCGGGGGCCATAGG 62.766 65.000 27.92 4.40 39.32 2.57
5 6 0.838987 GAATAGACCCGGGGGCCATA 60.839 60.000 27.92 10.11 39.32 2.74
6 7 2.038762 AATAGACCCGGGGGCCAT 60.039 61.111 27.92 4.01 39.32 4.40
7 8 2.770904 GAATAGACCCGGGGGCCA 60.771 66.667 27.92 0.54 39.32 5.36
8 9 2.447959 AGAATAGACCCGGGGGCC 60.448 66.667 27.92 13.76 39.32 5.80
9 10 0.178941 TAGAGAATAGACCCGGGGGC 60.179 60.000 27.92 16.20 39.32 5.80
10 11 2.225293 TGATAGAGAATAGACCCGGGGG 60.225 54.545 27.92 5.70 42.03 5.40
11 12 3.170991 TGATAGAGAATAGACCCGGGG 57.829 52.381 27.92 12.73 0.00 5.73
12 13 8.534954 TTAATATGATAGAGAATAGACCCGGG 57.465 38.462 22.25 22.25 0.00 5.73
36 37 9.822185 AAACGGTAATAGAAATAACGGTAGATT 57.178 29.630 0.00 0.00 37.77 2.40
56 57 8.936070 AAAGTAAAGAAAGCAAAATAAACGGT 57.064 26.923 0.00 0.00 0.00 4.83
111 112 9.359653 TGAGATGTGATAGAGATGACAAGATAA 57.640 33.333 0.00 0.00 32.60 1.75
112 113 8.791675 GTGAGATGTGATAGAGATGACAAGATA 58.208 37.037 0.00 0.00 32.60 1.98
113 114 7.506599 AGTGAGATGTGATAGAGATGACAAGAT 59.493 37.037 0.00 0.00 32.60 2.40
114 115 6.832900 AGTGAGATGTGATAGAGATGACAAGA 59.167 38.462 0.00 0.00 32.60 3.02
115 116 7.041635 AGTGAGATGTGATAGAGATGACAAG 57.958 40.000 0.00 0.00 32.60 3.16
116 117 7.415592 AAGTGAGATGTGATAGAGATGACAA 57.584 36.000 0.00 0.00 32.60 3.18
117 118 7.415592 AAAGTGAGATGTGATAGAGATGACA 57.584 36.000 0.00 0.00 33.44 3.58
118 119 7.254387 GCAAAAGTGAGATGTGATAGAGATGAC 60.254 40.741 0.00 0.00 0.00 3.06
119 120 6.760298 GCAAAAGTGAGATGTGATAGAGATGA 59.240 38.462 0.00 0.00 0.00 2.92
120 121 6.537660 TGCAAAAGTGAGATGTGATAGAGATG 59.462 38.462 0.00 0.00 0.00 2.90
121 122 6.647229 TGCAAAAGTGAGATGTGATAGAGAT 58.353 36.000 0.00 0.00 0.00 2.75
122 123 6.041423 TGCAAAAGTGAGATGTGATAGAGA 57.959 37.500 0.00 0.00 0.00 3.10
123 124 6.370994 ACTTGCAAAAGTGAGATGTGATAGAG 59.629 38.462 0.00 0.00 0.00 2.43
124 125 6.233434 ACTTGCAAAAGTGAGATGTGATAGA 58.767 36.000 0.00 0.00 0.00 1.98
125 126 6.492007 ACTTGCAAAAGTGAGATGTGATAG 57.508 37.500 0.00 0.00 0.00 2.08
137 138 1.034838 TCACGGCCACTTGCAAAAGT 61.035 50.000 2.24 0.00 43.89 2.66
138 139 0.102120 TTCACGGCCACTTGCAAAAG 59.898 50.000 2.24 0.00 43.89 2.27
139 140 0.102120 CTTCACGGCCACTTGCAAAA 59.898 50.000 2.24 0.00 43.89 2.44
140 141 1.732917 CTTCACGGCCACTTGCAAA 59.267 52.632 2.24 0.00 43.89 3.68
141 142 2.192861 CCTTCACGGCCACTTGCAA 61.193 57.895 2.24 0.00 43.89 4.08
142 143 2.594303 CCTTCACGGCCACTTGCA 60.594 61.111 2.24 0.00 43.89 4.08
143 144 3.365265 CCCTTCACGGCCACTTGC 61.365 66.667 2.24 0.00 40.16 4.01
144 145 0.609131 AATCCCTTCACGGCCACTTG 60.609 55.000 2.24 0.00 0.00 3.16
145 146 0.609131 CAATCCCTTCACGGCCACTT 60.609 55.000 2.24 0.00 0.00 3.16
146 147 1.002134 CAATCCCTTCACGGCCACT 60.002 57.895 2.24 0.00 0.00 4.00
147 148 1.002624 TCAATCCCTTCACGGCCAC 60.003 57.895 2.24 0.00 0.00 5.01
148 149 1.002624 GTCAATCCCTTCACGGCCA 60.003 57.895 2.24 0.00 0.00 5.36
149 150 0.608035 TTGTCAATCCCTTCACGGCC 60.608 55.000 0.00 0.00 0.00 6.13
150 151 1.068541 GTTTGTCAATCCCTTCACGGC 60.069 52.381 0.00 0.00 0.00 5.68
151 152 1.539827 GGTTTGTCAATCCCTTCACGG 59.460 52.381 1.65 0.00 0.00 4.94
152 153 1.539827 GGGTTTGTCAATCCCTTCACG 59.460 52.381 20.48 0.00 38.29 4.35
158 159 4.142469 CGTGATAAAGGGTTTGTCAATCCC 60.142 45.833 20.26 20.26 41.44 3.85
159 160 4.457949 ACGTGATAAAGGGTTTGTCAATCC 59.542 41.667 4.31 4.31 41.44 3.01
160 161 5.622770 ACGTGATAAAGGGTTTGTCAATC 57.377 39.130 1.01 0.00 41.44 2.67
161 162 5.278758 CCAACGTGATAAAGGGTTTGTCAAT 60.279 40.000 0.00 0.00 41.44 2.57
162 163 4.036971 CCAACGTGATAAAGGGTTTGTCAA 59.963 41.667 0.00 0.00 41.44 3.18
163 164 3.566322 CCAACGTGATAAAGGGTTTGTCA 59.434 43.478 0.00 0.00 38.26 3.58
164 165 3.566742 ACCAACGTGATAAAGGGTTTGTC 59.433 43.478 0.00 0.00 0.00 3.18
165 166 3.558033 ACCAACGTGATAAAGGGTTTGT 58.442 40.909 0.00 0.00 0.00 2.83
166 167 4.295051 CAACCAACGTGATAAAGGGTTTG 58.705 43.478 0.00 0.00 0.00 2.93
167 168 3.243602 GCAACCAACGTGATAAAGGGTTT 60.244 43.478 0.00 0.00 0.00 3.27
168 169 2.295070 GCAACCAACGTGATAAAGGGTT 59.705 45.455 0.00 0.00 0.00 4.11
169 170 1.883926 GCAACCAACGTGATAAAGGGT 59.116 47.619 0.00 0.00 0.00 4.34
170 171 1.883275 TGCAACCAACGTGATAAAGGG 59.117 47.619 0.00 0.00 0.00 3.95
171 172 3.564511 CTTGCAACCAACGTGATAAAGG 58.435 45.455 0.00 0.00 0.00 3.11
172 173 3.004315 ACCTTGCAACCAACGTGATAAAG 59.996 43.478 0.00 0.00 0.00 1.85
173 174 2.952978 ACCTTGCAACCAACGTGATAAA 59.047 40.909 0.00 0.00 0.00 1.40
174 175 2.577700 ACCTTGCAACCAACGTGATAA 58.422 42.857 0.00 0.00 0.00 1.75
175 176 2.264005 ACCTTGCAACCAACGTGATA 57.736 45.000 0.00 0.00 0.00 2.15
176 177 1.336755 GAACCTTGCAACCAACGTGAT 59.663 47.619 0.00 0.00 0.00 3.06
177 178 0.736053 GAACCTTGCAACCAACGTGA 59.264 50.000 0.00 0.00 0.00 4.35
178 179 0.738389 AGAACCTTGCAACCAACGTG 59.262 50.000 0.00 0.00 0.00 4.49
179 180 1.470051 AAGAACCTTGCAACCAACGT 58.530 45.000 0.00 0.00 0.00 3.99
180 181 3.915437 ATAAGAACCTTGCAACCAACG 57.085 42.857 0.00 0.00 0.00 4.10
181 182 6.918892 AAAAATAAGAACCTTGCAACCAAC 57.081 33.333 0.00 0.00 0.00 3.77
202 203 1.134037 AGTCCCACGCACCTACAAAAA 60.134 47.619 0.00 0.00 0.00 1.94
203 204 0.470766 AGTCCCACGCACCTACAAAA 59.529 50.000 0.00 0.00 0.00 2.44
204 205 0.470766 AAGTCCCACGCACCTACAAA 59.529 50.000 0.00 0.00 0.00 2.83
205 206 0.250124 CAAGTCCCACGCACCTACAA 60.250 55.000 0.00 0.00 0.00 2.41
206 207 1.116536 TCAAGTCCCACGCACCTACA 61.117 55.000 0.00 0.00 0.00 2.74
207 208 0.389948 CTCAAGTCCCACGCACCTAC 60.390 60.000 0.00 0.00 0.00 3.18
208 209 1.972198 CTCAAGTCCCACGCACCTA 59.028 57.895 0.00 0.00 0.00 3.08
209 210 2.743718 CTCAAGTCCCACGCACCT 59.256 61.111 0.00 0.00 0.00 4.00
210 211 3.050275 GCTCAAGTCCCACGCACC 61.050 66.667 0.00 0.00 0.00 5.01
211 212 3.414700 CGCTCAAGTCCCACGCAC 61.415 66.667 0.00 0.00 0.00 5.34
212 213 3.923864 ACGCTCAAGTCCCACGCA 61.924 61.111 0.00 0.00 0.00 5.24
213 214 3.414700 CACGCTCAAGTCCCACGC 61.415 66.667 0.00 0.00 0.00 5.34
214 215 2.738521 CCACGCTCAAGTCCCACG 60.739 66.667 0.00 0.00 0.00 4.94
215 216 1.668151 GACCACGCTCAAGTCCCAC 60.668 63.158 0.00 0.00 0.00 4.61
216 217 1.816863 GAGACCACGCTCAAGTCCCA 61.817 60.000 0.00 0.00 35.01 4.37
217 218 1.079750 GAGACCACGCTCAAGTCCC 60.080 63.158 0.00 0.00 35.01 4.46
218 219 1.079750 GGAGACCACGCTCAAGTCC 60.080 63.158 0.00 0.00 36.62 3.85
219 220 1.135344 GTAGGAGACCACGCTCAAGTC 60.135 57.143 0.00 0.00 36.62 3.01
220 221 0.889306 GTAGGAGACCACGCTCAAGT 59.111 55.000 0.00 0.00 36.62 3.16
221 222 1.135257 CAGTAGGAGACCACGCTCAAG 60.135 57.143 0.00 0.00 36.62 3.02
222 223 0.888619 CAGTAGGAGACCACGCTCAA 59.111 55.000 0.00 0.00 36.62 3.02
223 224 0.965866 CCAGTAGGAGACCACGCTCA 60.966 60.000 0.00 0.00 36.62 4.26
224 225 0.680280 TCCAGTAGGAGACCACGCTC 60.680 60.000 0.00 0.00 39.61 5.03
225 226 1.383019 TCCAGTAGGAGACCACGCT 59.617 57.895 0.00 0.00 39.61 5.07
226 227 4.013702 TCCAGTAGGAGACCACGC 57.986 61.111 0.00 0.00 39.61 5.34
235 236 2.764572 ACCAAGGTACGAATCCAGTAGG 59.235 50.000 0.00 0.00 0.00 3.18
236 237 4.159879 AGAACCAAGGTACGAATCCAGTAG 59.840 45.833 0.00 0.00 0.00 2.57
237 238 4.091549 AGAACCAAGGTACGAATCCAGTA 58.908 43.478 0.00 0.00 0.00 2.74
238 239 2.904434 AGAACCAAGGTACGAATCCAGT 59.096 45.455 0.00 0.00 0.00 4.00
239 240 3.522553 GAGAACCAAGGTACGAATCCAG 58.477 50.000 0.00 0.00 0.00 3.86
240 241 2.094390 CGAGAACCAAGGTACGAATCCA 60.094 50.000 0.00 0.00 0.00 3.41
241 242 2.165030 TCGAGAACCAAGGTACGAATCC 59.835 50.000 11.51 0.00 0.00 3.01
242 243 3.498927 TCGAGAACCAAGGTACGAATC 57.501 47.619 11.51 0.00 0.00 2.52
243 244 3.947910 TTCGAGAACCAAGGTACGAAT 57.052 42.857 17.81 0.00 35.40 3.34
244 245 3.383761 GTTTCGAGAACCAAGGTACGAA 58.616 45.455 17.81 17.81 36.94 3.85
245 246 2.605338 CGTTTCGAGAACCAAGGTACGA 60.605 50.000 10.40 10.40 0.00 3.43
246 247 1.717645 CGTTTCGAGAACCAAGGTACG 59.282 52.381 0.00 0.00 0.00 3.67
247 248 2.064014 CCGTTTCGAGAACCAAGGTAC 58.936 52.381 0.00 0.00 0.00 3.34
248 249 1.962807 TCCGTTTCGAGAACCAAGGTA 59.037 47.619 0.00 0.00 0.00 3.08
249 250 0.754472 TCCGTTTCGAGAACCAAGGT 59.246 50.000 5.33 0.00 0.00 3.50
250 251 1.429463 CTCCGTTTCGAGAACCAAGG 58.571 55.000 5.33 0.00 30.97 3.61
251 252 1.429463 CCTCCGTTTCGAGAACCAAG 58.571 55.000 5.33 3.78 30.97 3.61
252 253 0.034337 CCCTCCGTTTCGAGAACCAA 59.966 55.000 5.33 0.00 30.97 3.67
253 254 0.828762 TCCCTCCGTTTCGAGAACCA 60.829 55.000 5.33 0.00 30.97 3.67
254 255 0.319405 TTCCCTCCGTTTCGAGAACC 59.681 55.000 5.33 0.00 30.97 3.62
255 256 2.159327 TTTCCCTCCGTTTCGAGAAC 57.841 50.000 0.00 0.00 30.97 3.01
256 257 3.512724 AGTATTTCCCTCCGTTTCGAGAA 59.487 43.478 0.00 0.00 30.97 2.87
257 258 3.094572 AGTATTTCCCTCCGTTTCGAGA 58.905 45.455 0.00 0.00 30.97 4.04
258 259 3.521947 AGTATTTCCCTCCGTTTCGAG 57.478 47.619 0.00 0.00 0.00 4.04
259 260 3.967332 AAGTATTTCCCTCCGTTTCGA 57.033 42.857 0.00 0.00 0.00 3.71
260 261 3.549070 CGTAAGTATTTCCCTCCGTTTCG 59.451 47.826 0.00 0.00 0.00 3.46
261 262 3.308053 GCGTAAGTATTTCCCTCCGTTTC 59.692 47.826 0.00 0.00 41.68 2.78
262 263 3.055602 AGCGTAAGTATTTCCCTCCGTTT 60.056 43.478 0.00 0.00 41.68 3.60
263 264 2.498885 AGCGTAAGTATTTCCCTCCGTT 59.501 45.455 0.00 0.00 41.68 4.44
264 265 2.105766 AGCGTAAGTATTTCCCTCCGT 58.894 47.619 0.00 0.00 41.68 4.69
265 266 2.884894 AGCGTAAGTATTTCCCTCCG 57.115 50.000 0.00 0.00 41.68 4.63
266 267 4.933505 AGTAGCGTAAGTATTTCCCTCC 57.066 45.455 0.00 0.00 41.68 4.30
267 268 7.434602 CAGTAAAGTAGCGTAAGTATTTCCCTC 59.565 40.741 0.00 0.00 41.68 4.30
268 269 7.263496 CAGTAAAGTAGCGTAAGTATTTCCCT 58.737 38.462 0.00 0.00 41.68 4.20
269 270 6.019237 GCAGTAAAGTAGCGTAAGTATTTCCC 60.019 42.308 0.00 0.00 41.68 3.97
270 271 6.532657 TGCAGTAAAGTAGCGTAAGTATTTCC 59.467 38.462 0.00 0.00 41.68 3.13
271 272 7.515957 TGCAGTAAAGTAGCGTAAGTATTTC 57.484 36.000 0.00 0.00 41.68 2.17
272 273 7.762615 TGATGCAGTAAAGTAGCGTAAGTATTT 59.237 33.333 0.00 0.00 41.68 1.40
273 274 7.222224 GTGATGCAGTAAAGTAGCGTAAGTATT 59.778 37.037 0.00 0.00 41.68 1.89
274 275 6.696148 GTGATGCAGTAAAGTAGCGTAAGTAT 59.304 38.462 0.00 0.00 41.68 2.12
275 276 6.032094 GTGATGCAGTAAAGTAGCGTAAGTA 58.968 40.000 0.00 0.00 41.68 2.24
276 277 4.863131 GTGATGCAGTAAAGTAGCGTAAGT 59.137 41.667 0.00 0.00 41.68 2.24
277 278 4.267928 GGTGATGCAGTAAAGTAGCGTAAG 59.732 45.833 0.00 0.00 43.44 2.34
278 279 4.178540 GGTGATGCAGTAAAGTAGCGTAA 58.821 43.478 0.00 0.00 0.00 3.18
279 280 3.732774 CGGTGATGCAGTAAAGTAGCGTA 60.733 47.826 0.00 0.00 0.00 4.42
280 281 2.618053 GGTGATGCAGTAAAGTAGCGT 58.382 47.619 0.00 0.00 0.00 5.07
281 282 1.588404 CGGTGATGCAGTAAAGTAGCG 59.412 52.381 0.00 0.00 0.00 4.26
282 283 2.618053 ACGGTGATGCAGTAAAGTAGC 58.382 47.619 0.00 0.00 0.00 3.58
283 284 4.092968 GGAAACGGTGATGCAGTAAAGTAG 59.907 45.833 0.00 0.00 0.00 2.57
284 285 3.998341 GGAAACGGTGATGCAGTAAAGTA 59.002 43.478 0.00 0.00 0.00 2.24
285 286 2.812011 GGAAACGGTGATGCAGTAAAGT 59.188 45.455 0.00 0.00 0.00 2.66
286 287 3.074412 AGGAAACGGTGATGCAGTAAAG 58.926 45.455 0.00 0.00 0.00 1.85
287 288 3.071479 GAGGAAACGGTGATGCAGTAAA 58.929 45.455 0.00 0.00 0.00 2.01
288 289 2.301870 AGAGGAAACGGTGATGCAGTAA 59.698 45.455 0.00 0.00 0.00 2.24
289 290 1.899814 AGAGGAAACGGTGATGCAGTA 59.100 47.619 0.00 0.00 0.00 2.74
290 291 0.687354 AGAGGAAACGGTGATGCAGT 59.313 50.000 0.00 0.00 0.00 4.40
291 292 1.734465 GAAGAGGAAACGGTGATGCAG 59.266 52.381 0.00 0.00 0.00 4.41
292 293 1.071542 TGAAGAGGAAACGGTGATGCA 59.928 47.619 0.00 0.00 0.00 3.96
293 294 1.808411 TGAAGAGGAAACGGTGATGC 58.192 50.000 0.00 0.00 0.00 3.91
305 306 2.293399 CGTTGGTTTTCCCTTGAAGAGG 59.707 50.000 0.00 0.00 45.86 3.69
306 307 2.287608 GCGTTGGTTTTCCCTTGAAGAG 60.288 50.000 0.00 0.00 39.73 2.85
307 308 1.679153 GCGTTGGTTTTCCCTTGAAGA 59.321 47.619 0.00 0.00 39.73 2.87
308 309 1.407258 TGCGTTGGTTTTCCCTTGAAG 59.593 47.619 0.00 0.00 39.73 3.02
309 310 1.407258 CTGCGTTGGTTTTCCCTTGAA 59.593 47.619 0.00 0.00 39.73 2.69
310 311 1.028905 CTGCGTTGGTTTTCCCTTGA 58.971 50.000 0.00 0.00 39.73 3.02
311 312 0.744281 ACTGCGTTGGTTTTCCCTTG 59.256 50.000 0.00 0.00 39.73 3.61
312 313 0.744281 CACTGCGTTGGTTTTCCCTT 59.256 50.000 0.00 0.00 39.73 3.95
313 314 1.734388 GCACTGCGTTGGTTTTCCCT 61.734 55.000 0.00 0.00 39.73 4.20
314 315 1.299850 GCACTGCGTTGGTTTTCCC 60.300 57.895 0.00 0.00 39.73 3.97
315 316 0.317854 GAGCACTGCGTTGGTTTTCC 60.318 55.000 0.00 0.00 41.14 3.13
316 317 0.380378 TGAGCACTGCGTTGGTTTTC 59.620 50.000 0.00 0.00 0.00 2.29
317 318 0.814457 TTGAGCACTGCGTTGGTTTT 59.186 45.000 0.00 0.00 0.00 2.43
318 319 0.381801 CTTGAGCACTGCGTTGGTTT 59.618 50.000 0.00 0.00 0.00 3.27
319 320 0.463654 TCTTGAGCACTGCGTTGGTT 60.464 50.000 0.00 0.00 0.00 3.67
320 321 0.882042 CTCTTGAGCACTGCGTTGGT 60.882 55.000 0.00 0.00 0.00 3.67
321 322 1.572085 CCTCTTGAGCACTGCGTTGG 61.572 60.000 0.00 0.00 0.00 3.77
322 323 0.882042 ACCTCTTGAGCACTGCGTTG 60.882 55.000 0.00 0.00 0.00 4.10
323 324 0.679505 TACCTCTTGAGCACTGCGTT 59.320 50.000 0.00 0.00 0.00 4.84
324 325 0.244994 CTACCTCTTGAGCACTGCGT 59.755 55.000 0.00 0.00 0.00 5.24
325 326 1.080995 GCTACCTCTTGAGCACTGCG 61.081 60.000 0.00 0.00 38.62 5.18
326 327 0.036952 TGCTACCTCTTGAGCACTGC 60.037 55.000 0.00 0.00 43.64 4.40
330 331 1.047801 TGTGTGCTACCTCTTGAGCA 58.952 50.000 0.00 0.00 46.24 4.26
331 332 1.433534 GTGTGTGCTACCTCTTGAGC 58.566 55.000 0.00 0.00 39.25 4.26
332 333 1.344438 TGGTGTGTGCTACCTCTTGAG 59.656 52.381 0.00 0.00 39.01 3.02
333 334 1.419381 TGGTGTGTGCTACCTCTTGA 58.581 50.000 0.00 0.00 39.01 3.02
334 335 2.146342 CTTGGTGTGTGCTACCTCTTG 58.854 52.381 0.00 0.00 39.01 3.02
335 336 1.072331 CCTTGGTGTGTGCTACCTCTT 59.928 52.381 0.00 0.00 39.01 2.85
336 337 0.687354 CCTTGGTGTGTGCTACCTCT 59.313 55.000 0.00 0.00 39.01 3.69
337 338 0.321653 CCCTTGGTGTGTGCTACCTC 60.322 60.000 0.00 0.00 39.01 3.85
338 339 1.060163 ACCCTTGGTGTGTGCTACCT 61.060 55.000 0.00 0.00 39.01 3.08
339 340 1.454539 ACCCTTGGTGTGTGCTACC 59.545 57.895 0.00 0.00 38.71 3.18
355 356 3.853698 TTAGTGGTTGGGGCGCACC 62.854 63.158 25.59 25.59 39.11 5.01
356 357 1.248101 AATTAGTGGTTGGGGCGCAC 61.248 55.000 10.83 4.83 0.00 5.34
357 358 0.540830 AAATTAGTGGTTGGGGCGCA 60.541 50.000 10.83 0.00 0.00 6.09
358 359 0.606096 AAAATTAGTGGTTGGGGCGC 59.394 50.000 0.00 0.00 0.00 6.53
375 376 5.730296 TGGTTCTCCTTGTTTGACAAAAA 57.270 34.783 1.27 0.00 37.69 1.94
376 377 5.930837 ATGGTTCTCCTTGTTTGACAAAA 57.069 34.783 1.27 0.00 37.69 2.44
377 378 6.775142 TCATATGGTTCTCCTTGTTTGACAAA 59.225 34.615 2.13 0.00 37.69 2.83
378 379 6.206634 GTCATATGGTTCTCCTTGTTTGACAA 59.793 38.462 2.13 0.00 36.54 3.18
379 380 5.705441 GTCATATGGTTCTCCTTGTTTGACA 59.295 40.000 2.13 0.00 32.97 3.58
380 381 5.705441 TGTCATATGGTTCTCCTTGTTTGAC 59.295 40.000 2.13 0.00 33.13 3.18
381 382 5.875224 TGTCATATGGTTCTCCTTGTTTGA 58.125 37.500 2.13 0.00 34.23 2.69
382 383 6.016360 TGTTGTCATATGGTTCTCCTTGTTTG 60.016 38.462 2.13 0.00 34.23 2.93
383 384 6.068010 TGTTGTCATATGGTTCTCCTTGTTT 58.932 36.000 2.13 0.00 34.23 2.83
384 385 5.630121 TGTTGTCATATGGTTCTCCTTGTT 58.370 37.500 2.13 0.00 34.23 2.83
385 386 5.241403 TGTTGTCATATGGTTCTCCTTGT 57.759 39.130 2.13 0.00 34.23 3.16
386 387 6.405065 CCAATGTTGTCATATGGTTCTCCTTG 60.405 42.308 2.13 0.33 33.49 3.61
387 388 5.653769 CCAATGTTGTCATATGGTTCTCCTT 59.346 40.000 2.13 0.00 33.49 3.36
388 389 5.195940 CCAATGTTGTCATATGGTTCTCCT 58.804 41.667 2.13 0.00 33.49 3.69
389 390 4.339247 CCCAATGTTGTCATATGGTTCTCC 59.661 45.833 2.13 0.00 34.03 3.71
390 391 4.949856 ACCCAATGTTGTCATATGGTTCTC 59.050 41.667 2.13 0.00 35.77 2.87
391 392 4.934356 ACCCAATGTTGTCATATGGTTCT 58.066 39.130 2.13 0.00 35.77 3.01
392 393 5.659440 AACCCAATGTTGTCATATGGTTC 57.341 39.130 2.13 0.00 40.67 3.62
393 394 6.042552 TGAAAACCCAATGTTGTCATATGGTT 59.957 34.615 2.13 7.83 44.54 3.67
394 395 5.541868 TGAAAACCCAATGTTGTCATATGGT 59.458 36.000 2.13 0.00 44.54 3.55
395 396 6.035368 TGAAAACCCAATGTTGTCATATGG 57.965 37.500 2.13 0.00 44.54 2.74
400 401 2.762887 TGCTGAAAACCCAATGTTGTCA 59.237 40.909 0.00 0.00 46.68 3.58
401 402 3.383761 CTGCTGAAAACCCAATGTTGTC 58.616 45.455 0.00 0.00 40.99 3.18
402 403 2.102925 CCTGCTGAAAACCCAATGTTGT 59.897 45.455 0.00 0.00 37.23 3.32
403 404 2.758009 CCTGCTGAAAACCCAATGTTG 58.242 47.619 0.00 0.00 37.23 3.33
404 405 1.070601 GCCTGCTGAAAACCCAATGTT 59.929 47.619 0.00 0.00 39.43 2.71
405 406 0.681175 GCCTGCTGAAAACCCAATGT 59.319 50.000 0.00 0.00 0.00 2.71
406 407 0.971386 AGCCTGCTGAAAACCCAATG 59.029 50.000 0.00 0.00 0.00 2.82
407 408 2.450476 CTAGCCTGCTGAAAACCCAAT 58.550 47.619 0.97 0.00 0.00 3.16
408 409 1.547675 CCTAGCCTGCTGAAAACCCAA 60.548 52.381 0.97 0.00 0.00 4.12
409 410 0.038166 CCTAGCCTGCTGAAAACCCA 59.962 55.000 0.97 0.00 0.00 4.51
410 411 0.038310 ACCTAGCCTGCTGAAAACCC 59.962 55.000 0.97 0.00 0.00 4.11
411 412 1.813178 GAACCTAGCCTGCTGAAAACC 59.187 52.381 0.97 0.00 0.00 3.27
412 413 1.464997 CGAACCTAGCCTGCTGAAAAC 59.535 52.381 0.97 0.00 0.00 2.43
413 414 1.071699 ACGAACCTAGCCTGCTGAAAA 59.928 47.619 0.97 0.00 0.00 2.29
414 415 0.685097 ACGAACCTAGCCTGCTGAAA 59.315 50.000 0.97 0.00 0.00 2.69
415 416 1.476891 CTACGAACCTAGCCTGCTGAA 59.523 52.381 0.97 0.00 0.00 3.02
416 417 1.103803 CTACGAACCTAGCCTGCTGA 58.896 55.000 0.97 0.00 0.00 4.26
417 418 0.528684 GCTACGAACCTAGCCTGCTG 60.529 60.000 0.97 0.00 34.16 4.41
418 419 0.970937 TGCTACGAACCTAGCCTGCT 60.971 55.000 0.00 0.00 38.77 4.24
419 420 0.108329 TTGCTACGAACCTAGCCTGC 60.108 55.000 0.00 0.00 38.77 4.85
420 421 1.927895 CTTGCTACGAACCTAGCCTG 58.072 55.000 0.00 0.00 38.77 4.85
421 422 0.175989 GCTTGCTACGAACCTAGCCT 59.824 55.000 0.00 0.00 38.77 4.58
422 423 0.108329 TGCTTGCTACGAACCTAGCC 60.108 55.000 0.00 0.00 38.77 3.93
423 424 1.722011 TTGCTTGCTACGAACCTAGC 58.278 50.000 0.00 0.00 39.81 3.42
424 425 3.262420 ACATTGCTTGCTACGAACCTAG 58.738 45.455 0.00 0.00 0.00 3.02
425 426 3.259064 GACATTGCTTGCTACGAACCTA 58.741 45.455 0.00 0.00 0.00 3.08
426 427 2.076863 GACATTGCTTGCTACGAACCT 58.923 47.619 0.00 0.00 0.00 3.50
427 428 1.130561 GGACATTGCTTGCTACGAACC 59.869 52.381 0.00 0.00 0.00 3.62
428 429 1.201921 CGGACATTGCTTGCTACGAAC 60.202 52.381 0.00 0.00 0.00 3.95
429 430 1.075542 CGGACATTGCTTGCTACGAA 58.924 50.000 0.00 0.00 0.00 3.85
430 431 0.037697 ACGGACATTGCTTGCTACGA 60.038 50.000 0.00 0.00 0.00 3.43
431 432 0.370273 GACGGACATTGCTTGCTACG 59.630 55.000 0.00 0.00 0.00 3.51
432 433 0.370273 CGACGGACATTGCTTGCTAC 59.630 55.000 0.00 0.00 0.00 3.58
433 434 0.245266 TCGACGGACATTGCTTGCTA 59.755 50.000 0.00 0.00 0.00 3.49
434 435 1.005037 TCGACGGACATTGCTTGCT 60.005 52.632 0.00 0.00 0.00 3.91
435 436 1.132640 GTCGACGGACATTGCTTGC 59.867 57.895 0.00 0.00 42.91 4.01
436 437 1.990799 TAGTCGACGGACATTGCTTG 58.009 50.000 10.46 0.00 45.92 4.01
437 438 2.094182 ACATAGTCGACGGACATTGCTT 60.094 45.455 10.46 0.00 45.92 3.91
438 439 1.476891 ACATAGTCGACGGACATTGCT 59.523 47.619 10.46 0.00 45.92 3.91
439 440 1.852895 GACATAGTCGACGGACATTGC 59.147 52.381 10.46 0.00 45.92 3.56
440 441 3.364062 GAGACATAGTCGACGGACATTG 58.636 50.000 10.46 5.53 45.92 2.82
441 442 2.358267 GGAGACATAGTCGACGGACATT 59.642 50.000 10.46 0.00 45.92 2.71
442 443 1.948145 GGAGACATAGTCGACGGACAT 59.052 52.381 10.46 0.00 45.92 3.06
443 444 1.339342 TGGAGACATAGTCGACGGACA 60.339 52.381 10.46 0.00 39.93 4.02
444 445 1.376543 TGGAGACATAGTCGACGGAC 58.623 55.000 10.46 4.72 38.44 4.79
445 446 2.118313 TTGGAGACATAGTCGACGGA 57.882 50.000 10.46 2.41 42.32 4.69
446 447 2.094906 TGTTTGGAGACATAGTCGACGG 60.095 50.000 10.46 6.64 42.32 4.79
447 448 3.211803 TGTTTGGAGACATAGTCGACG 57.788 47.619 10.46 0.00 42.32 5.12
448 449 7.201530 CCTTAATTGTTTGGAGACATAGTCGAC 60.202 40.741 7.70 7.70 42.32 4.20
449 450 6.816640 CCTTAATTGTTTGGAGACATAGTCGA 59.183 38.462 0.00 0.00 42.32 4.20
450 451 6.816640 TCCTTAATTGTTTGGAGACATAGTCG 59.183 38.462 0.00 0.00 42.32 4.18
451 452 8.561738 TTCCTTAATTGTTTGGAGACATAGTC 57.438 34.615 0.00 0.00 42.32 2.59
452 453 8.383175 TCTTCCTTAATTGTTTGGAGACATAGT 58.617 33.333 0.00 0.00 42.32 2.12
453 454 8.792830 TCTTCCTTAATTGTTTGGAGACATAG 57.207 34.615 0.00 0.00 42.32 2.23
454 455 7.829211 CCTCTTCCTTAATTGTTTGGAGACATA 59.171 37.037 0.00 0.00 42.32 2.29
455 456 6.660949 CCTCTTCCTTAATTGTTTGGAGACAT 59.339 38.462 0.00 0.00 42.32 3.06
456 457 6.003950 CCTCTTCCTTAATTGTTTGGAGACA 58.996 40.000 0.00 0.00 39.83 3.41
457 458 5.416013 CCCTCTTCCTTAATTGTTTGGAGAC 59.584 44.000 0.00 0.00 0.00 3.36
458 459 5.074515 ACCCTCTTCCTTAATTGTTTGGAGA 59.925 40.000 0.00 0.00 0.00 3.71
459 460 5.183904 CACCCTCTTCCTTAATTGTTTGGAG 59.816 44.000 0.00 0.00 0.00 3.86
460 461 5.076873 CACCCTCTTCCTTAATTGTTTGGA 58.923 41.667 0.00 0.00 0.00 3.53
461 462 4.832823 ACACCCTCTTCCTTAATTGTTTGG 59.167 41.667 0.00 0.00 0.00 3.28
462 463 5.534654 TGACACCCTCTTCCTTAATTGTTTG 59.465 40.000 0.00 0.00 0.00 2.93
463 464 5.701224 TGACACCCTCTTCCTTAATTGTTT 58.299 37.500 0.00 0.00 0.00 2.83
464 465 5.319043 TGACACCCTCTTCCTTAATTGTT 57.681 39.130 0.00 0.00 0.00 2.83
465 466 4.993705 TGACACCCTCTTCCTTAATTGT 57.006 40.909 0.00 0.00 0.00 2.71
466 467 4.156739 GCTTGACACCCTCTTCCTTAATTG 59.843 45.833 0.00 0.00 0.00 2.32
467 468 4.202567 TGCTTGACACCCTCTTCCTTAATT 60.203 41.667 0.00 0.00 0.00 1.40
468 469 3.330701 TGCTTGACACCCTCTTCCTTAAT 59.669 43.478 0.00 0.00 0.00 1.40
469 470 2.708861 TGCTTGACACCCTCTTCCTTAA 59.291 45.455 0.00 0.00 0.00 1.85
470 471 2.334977 TGCTTGACACCCTCTTCCTTA 58.665 47.619 0.00 0.00 0.00 2.69
471 472 1.140312 TGCTTGACACCCTCTTCCTT 58.860 50.000 0.00 0.00 0.00 3.36
472 473 1.366319 ATGCTTGACACCCTCTTCCT 58.634 50.000 0.00 0.00 0.00 3.36
473 474 3.209410 CATATGCTTGACACCCTCTTCC 58.791 50.000 0.00 0.00 0.00 3.46
474 475 2.615912 GCATATGCTTGACACCCTCTTC 59.384 50.000 20.64 0.00 38.21 2.87
475 476 2.648059 GCATATGCTTGACACCCTCTT 58.352 47.619 20.64 0.00 38.21 2.85
476 477 1.133976 GGCATATGCTTGACACCCTCT 60.134 52.381 26.12 0.00 41.70 3.69
477 478 1.312815 GGCATATGCTTGACACCCTC 58.687 55.000 26.12 2.70 41.70 4.30
478 479 0.625316 TGGCATATGCTTGACACCCT 59.375 50.000 26.12 0.00 41.70 4.34
479 480 1.134946 GTTGGCATATGCTTGACACCC 59.865 52.381 26.12 8.37 41.70 4.61
480 481 1.134946 GGTTGGCATATGCTTGACACC 59.865 52.381 26.12 19.14 41.70 4.16
481 482 1.818060 TGGTTGGCATATGCTTGACAC 59.182 47.619 26.12 14.90 41.70 3.67
482 483 2.212812 TGGTTGGCATATGCTTGACA 57.787 45.000 26.12 17.15 41.70 3.58
483 484 2.800629 GCATGGTTGGCATATGCTTGAC 60.801 50.000 26.12 19.94 42.84 3.18
484 485 1.409790 GCATGGTTGGCATATGCTTGA 59.590 47.619 26.12 10.41 42.84 3.02
485 486 1.137282 TGCATGGTTGGCATATGCTTG 59.863 47.619 26.12 14.70 45.53 4.01
486 487 1.137479 GTGCATGGTTGGCATATGCTT 59.863 47.619 26.12 3.26 45.53 3.91
487 488 0.748450 GTGCATGGTTGGCATATGCT 59.252 50.000 26.12 3.22 45.53 3.79
488 489 0.460722 TGTGCATGGTTGGCATATGC 59.539 50.000 19.79 19.79 44.11 3.14
489 490 1.202440 GGTGTGCATGGTTGGCATATG 60.202 52.381 0.00 0.00 44.11 1.78
490 491 1.113788 GGTGTGCATGGTTGGCATAT 58.886 50.000 0.00 0.00 44.11 1.78
491 492 0.251519 TGGTGTGCATGGTTGGCATA 60.252 50.000 0.00 0.00 44.11 3.14
492 493 1.120184 TTGGTGTGCATGGTTGGCAT 61.120 50.000 0.00 0.00 44.11 4.40
493 494 1.120184 ATTGGTGTGCATGGTTGGCA 61.120 50.000 0.00 0.00 39.32 4.92
494 495 0.894141 TATTGGTGTGCATGGTTGGC 59.106 50.000 0.00 0.00 0.00 4.52
495 496 3.025978 AGATATTGGTGTGCATGGTTGG 58.974 45.455 0.00 0.00 0.00 3.77
496 497 5.125356 TCTAGATATTGGTGTGCATGGTTG 58.875 41.667 0.00 0.00 0.00 3.77
497 498 5.372343 TCTAGATATTGGTGTGCATGGTT 57.628 39.130 0.00 0.00 0.00 3.67
498 499 5.513788 GGATCTAGATATTGGTGTGCATGGT 60.514 44.000 4.89 0.00 0.00 3.55
499 500 4.940046 GGATCTAGATATTGGTGTGCATGG 59.060 45.833 4.89 0.00 0.00 3.66
500 501 5.554070 TGGATCTAGATATTGGTGTGCATG 58.446 41.667 4.89 0.00 0.00 4.06
501 502 5.830799 TGGATCTAGATATTGGTGTGCAT 57.169 39.130 4.89 0.00 0.00 3.96
502 503 5.614308 CTTGGATCTAGATATTGGTGTGCA 58.386 41.667 4.89 0.00 0.00 4.57
503 504 4.453819 GCTTGGATCTAGATATTGGTGTGC 59.546 45.833 4.89 0.00 0.00 4.57
504 505 5.614308 TGCTTGGATCTAGATATTGGTGTG 58.386 41.667 4.89 0.00 0.00 3.82
505 506 5.744300 GCTGCTTGGATCTAGATATTGGTGT 60.744 44.000 4.89 0.00 0.00 4.16
506 507 4.694509 GCTGCTTGGATCTAGATATTGGTG 59.305 45.833 4.89 0.00 0.00 4.17
507 508 4.596643 AGCTGCTTGGATCTAGATATTGGT 59.403 41.667 4.89 0.00 0.00 3.67
508 509 4.936411 CAGCTGCTTGGATCTAGATATTGG 59.064 45.833 4.89 0.00 0.00 3.16
509 510 5.791666 TCAGCTGCTTGGATCTAGATATTG 58.208 41.667 9.47 0.00 0.00 1.90
510 511 6.430962 TTCAGCTGCTTGGATCTAGATATT 57.569 37.500 9.47 0.00 0.00 1.28
511 512 6.183361 TGTTTCAGCTGCTTGGATCTAGATAT 60.183 38.462 9.47 0.00 0.00 1.63
512 513 5.129320 TGTTTCAGCTGCTTGGATCTAGATA 59.871 40.000 9.47 0.00 0.00 1.98
513 514 4.080695 TGTTTCAGCTGCTTGGATCTAGAT 60.081 41.667 9.47 4.47 0.00 1.98
514 515 3.261643 TGTTTCAGCTGCTTGGATCTAGA 59.738 43.478 9.47 0.00 0.00 2.43
515 516 3.603532 TGTTTCAGCTGCTTGGATCTAG 58.396 45.455 9.47 0.00 0.00 2.43
516 517 3.701205 TGTTTCAGCTGCTTGGATCTA 57.299 42.857 9.47 0.00 0.00 1.98
517 518 2.555757 GTTGTTTCAGCTGCTTGGATCT 59.444 45.455 9.47 0.00 0.00 2.75
518 519 2.666619 CGTTGTTTCAGCTGCTTGGATC 60.667 50.000 9.47 0.00 0.00 3.36
519 520 1.267806 CGTTGTTTCAGCTGCTTGGAT 59.732 47.619 9.47 0.00 0.00 3.41
520 521 0.662619 CGTTGTTTCAGCTGCTTGGA 59.337 50.000 9.47 0.00 0.00 3.53
521 522 0.662619 TCGTTGTTTCAGCTGCTTGG 59.337 50.000 9.47 0.00 0.00 3.61
522 523 2.032054 TCTTCGTTGTTTCAGCTGCTTG 59.968 45.455 9.47 0.00 0.00 4.01
523 524 2.032178 GTCTTCGTTGTTTCAGCTGCTT 59.968 45.455 9.47 0.00 0.00 3.91
524 525 1.599542 GTCTTCGTTGTTTCAGCTGCT 59.400 47.619 9.47 0.00 0.00 4.24
525 526 1.334149 GGTCTTCGTTGTTTCAGCTGC 60.334 52.381 9.47 0.00 0.00 5.25
526 527 2.213499 AGGTCTTCGTTGTTTCAGCTG 58.787 47.619 7.63 7.63 0.00 4.24
527 528 2.622064 AGGTCTTCGTTGTTTCAGCT 57.378 45.000 0.00 0.00 0.00 4.24
528 529 2.872858 AGAAGGTCTTCGTTGTTTCAGC 59.127 45.455 5.22 0.00 43.97 4.26
529 530 5.522460 TGTAAGAAGGTCTTCGTTGTTTCAG 59.478 40.000 4.66 0.00 43.97 3.02
530 531 5.421277 TGTAAGAAGGTCTTCGTTGTTTCA 58.579 37.500 4.66 0.00 43.97 2.69
531 532 5.978934 TGTAAGAAGGTCTTCGTTGTTTC 57.021 39.130 4.66 0.00 43.97 2.78
532 533 5.065602 GGTTGTAAGAAGGTCTTCGTTGTTT 59.934 40.000 4.66 0.00 43.97 2.83
533 534 4.573607 GGTTGTAAGAAGGTCTTCGTTGTT 59.426 41.667 4.66 0.00 43.97 2.83
534 535 4.124970 GGTTGTAAGAAGGTCTTCGTTGT 58.875 43.478 4.66 0.00 43.97 3.32
535 536 3.183775 CGGTTGTAAGAAGGTCTTCGTTG 59.816 47.826 4.66 0.00 43.97 4.10
536 537 3.387397 CGGTTGTAAGAAGGTCTTCGTT 58.613 45.455 4.66 3.53 43.97 3.85
537 538 2.288640 CCGGTTGTAAGAAGGTCTTCGT 60.289 50.000 0.00 4.97 43.97 3.85
538 539 2.334838 CCGGTTGTAAGAAGGTCTTCG 58.665 52.381 0.00 0.00 43.97 3.79
539 540 2.301009 TCCCGGTTGTAAGAAGGTCTTC 59.699 50.000 0.00 2.69 37.89 2.87
540 541 2.038164 GTCCCGGTTGTAAGAAGGTCTT 59.962 50.000 0.00 0.00 40.35 3.01
541 542 1.622312 GTCCCGGTTGTAAGAAGGTCT 59.378 52.381 0.00 0.00 0.00 3.85
542 543 1.338484 GGTCCCGGTTGTAAGAAGGTC 60.338 57.143 0.00 0.00 0.00 3.85
543 544 0.689055 GGTCCCGGTTGTAAGAAGGT 59.311 55.000 0.00 0.00 0.00 3.50
544 545 0.035725 GGGTCCCGGTTGTAAGAAGG 60.036 60.000 0.00 0.00 0.00 3.46
545 546 0.688487 TGGGTCCCGGTTGTAAGAAG 59.312 55.000 2.65 0.00 0.00 2.85
546 547 0.688487 CTGGGTCCCGGTTGTAAGAA 59.312 55.000 8.83 0.00 0.00 2.52
547 548 0.472352 ACTGGGTCCCGGTTGTAAGA 60.472 55.000 17.55 0.00 40.77 2.10
548 549 0.036671 GACTGGGTCCCGGTTGTAAG 60.037 60.000 23.96 5.71 44.10 2.34
549 550 0.763604 TGACTGGGTCCCGGTTGTAA 60.764 55.000 23.96 7.54 44.10 2.41
550 551 0.545787 ATGACTGGGTCCCGGTTGTA 60.546 55.000 23.96 13.47 44.10 2.41
551 552 1.423794 AATGACTGGGTCCCGGTTGT 61.424 55.000 23.96 12.49 44.10 3.32
552 553 0.676782 GAATGACTGGGTCCCGGTTG 60.677 60.000 23.96 6.18 44.10 3.77
553 554 1.131303 TGAATGACTGGGTCCCGGTT 61.131 55.000 23.96 8.13 44.10 4.44
555 556 0.392998 CTTGAATGACTGGGTCCCGG 60.393 60.000 15.97 15.97 35.68 5.73
556 557 0.392998 CCTTGAATGACTGGGTCCCG 60.393 60.000 2.65 0.50 0.00 5.14
557 558 0.034089 CCCTTGAATGACTGGGTCCC 60.034 60.000 0.00 0.00 35.13 4.46
558 559 3.577389 CCCTTGAATGACTGGGTCC 57.423 57.895 0.00 0.00 35.13 4.46
561 562 6.265422 GGATAATTAACCCTTGAATGACTGGG 59.735 42.308 0.24 0.00 44.89 4.45
562 563 7.062957 AGGATAATTAACCCTTGAATGACTGG 58.937 38.462 8.09 0.00 0.00 4.00
563 564 8.525290 AAGGATAATTAACCCTTGAATGACTG 57.475 34.615 17.00 0.00 38.74 3.51
564 565 9.547279 AAAAGGATAATTAACCCTTGAATGACT 57.453 29.630 17.93 3.96 39.97 3.41
567 568 9.599866 GGAAAAAGGATAATTAACCCTTGAATG 57.400 33.333 17.93 0.00 39.97 2.67
568 569 8.768397 GGGAAAAAGGATAATTAACCCTTGAAT 58.232 33.333 17.93 10.49 39.97 2.57
569 570 7.959152 AGGGAAAAAGGATAATTAACCCTTGAA 59.041 33.333 17.93 0.00 41.83 2.69
570 571 7.483881 AGGGAAAAAGGATAATTAACCCTTGA 58.516 34.615 17.93 0.00 41.83 3.02
571 572 7.398904 TGAGGGAAAAAGGATAATTAACCCTTG 59.601 37.037 17.93 0.00 44.11 3.61
679 680 0.460987 CGGAGATGGCAGAGTTCACC 60.461 60.000 0.00 0.00 0.00 4.02
753 754 5.764686 TGTGCAACTGTCTGAATAGAATTGT 59.235 36.000 0.00 0.00 38.04 2.71
769 770 1.748879 ACAAGCCACGTGTGCAACT 60.749 52.632 24.48 8.61 38.04 3.16
777 778 4.265056 GGGTCCCACAAGCCACGT 62.265 66.667 1.78 0.00 36.78 4.49
805 806 1.072806 ACAATGGCTCTCTGCTCAACA 59.927 47.619 0.00 0.00 42.39 3.33
870 892 2.360726 TCACCGCCGTGCTCTCTA 60.361 61.111 0.00 0.00 40.04 2.43
917 994 3.144506 CCATGCTCTCTCTCTCTCTCTC 58.855 54.545 0.00 0.00 0.00 3.20
1092 1201 2.028020 GTGAGAAACCCTCCGATCAACT 60.028 50.000 0.00 0.00 41.25 3.16
1183 1292 1.553248 AGATCCCGACCACGAAAATGA 59.447 47.619 0.00 0.00 42.66 2.57
1240 1351 4.154942 ACCCAAAGAAAGAAGCATGTCAT 58.845 39.130 0.00 0.00 0.00 3.06
1406 1517 5.620206 TCTTCAACATCCTAAGCTCAACAA 58.380 37.500 0.00 0.00 0.00 2.83
1461 1572 9.427821 AAGTAATTGCAAATGGGTATTGGTATA 57.572 29.630 1.71 0.00 0.00 1.47
1512 1623 4.991153 TTTCAACATTACAACCAGTGCA 57.009 36.364 0.00 0.00 0.00 4.57
1673 1789 8.960591 GTTTATGAATTCCTCATTTCTTCTCCA 58.039 33.333 2.27 0.00 42.46 3.86
1695 1811 7.874016 AGCTGCATTTCATTGATCAAAAGTTTA 59.126 29.630 13.09 0.00 0.00 2.01
1777 1893 1.003355 GCCTGCACTTGGCTCTACA 60.003 57.895 8.16 0.00 46.38 2.74
1805 1921 2.381911 CTAATTGGATGCAGTTGGCCT 58.618 47.619 3.32 0.00 43.89 5.19
2038 2159 1.275856 GAGGCACATTTTCCATGGCAA 59.724 47.619 6.96 0.00 41.15 4.52
2041 2162 1.134907 GCTGAGGCACATTTTCCATGG 60.135 52.381 4.97 4.97 38.54 3.66
2225 2348 0.393448 TAGCGGTTACCAGTGCAACA 59.607 50.000 1.13 0.00 41.43 3.33
2231 2354 1.183549 CTGTCCTAGCGGTTACCAGT 58.816 55.000 1.13 0.00 0.00 4.00
2266 2389 5.546499 TGTATACATTCCTTCCCTACCCATC 59.454 44.000 0.08 0.00 0.00 3.51
2346 2470 5.432645 GTTTCCAACCCTCCAAAATTTCAA 58.567 37.500 0.00 0.00 0.00 2.69
2430 2562 7.565768 TGTTCCCTTTAAATCCTAAACCAAGTT 59.434 33.333 0.00 0.00 0.00 2.66
2455 2587 7.878477 AGTCATGAACTAACATGCAAATTTG 57.122 32.000 14.03 14.03 44.79 2.32
2522 2660 9.185192 GAGAACTTGTGGTTTTCATTAATGAAG 57.815 33.333 25.58 16.35 46.34 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.