Multiple sequence alignment - TraesCS5D01G046900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G046900 chr5D 100.000 3566 0 0 1 3566 45354467 45350902 0.000000e+00 6586.0
1 TraesCS5D01G046900 chr5D 96.219 2539 57 6 688 3190 442964420 442966955 0.000000e+00 4120.0
2 TraesCS5D01G046900 chr5D 95.065 2614 67 18 687 3247 435192755 435195359 0.000000e+00 4056.0
3 TraesCS5D01G046900 chr5D 95.817 502 15 4 3066 3566 442967318 442967814 0.000000e+00 806.0
4 TraesCS5D01G046900 chr5D 78.495 372 65 13 157 522 496411002 496411364 2.770000e-56 230.0
5 TraesCS5D01G046900 chr2D 96.779 2577 47 5 688 3230 459776856 459779430 0.000000e+00 4266.0
6 TraesCS5D01G046900 chr2D 98.982 491 5 0 3076 3566 459780147 459780637 0.000000e+00 880.0
7 TraesCS5D01G046900 chr2D 95.397 478 16 5 3090 3566 43892626 43893098 0.000000e+00 756.0
8 TraesCS5D01G046900 chr2D 96.474 312 11 0 688 999 43889897 43890208 1.900000e-142 516.0
9 TraesCS5D01G046900 chr6D 96.417 2540 55 5 688 3192 124597511 124600049 0.000000e+00 4154.0
10 TraesCS5D01G046900 chr6D 96.574 2452 45 5 688 3105 9124703 9127149 0.000000e+00 4026.0
11 TraesCS5D01G046900 chr6D 89.785 558 47 8 3005 3558 456315467 456316018 0.000000e+00 706.0
12 TraesCS5D01G046900 chr3D 95.867 2492 42 6 688 3144 31790294 31792759 0.000000e+00 3975.0
13 TraesCS5D01G046900 chr3D 97.774 1572 29 5 1669 3235 609329231 609327661 0.000000e+00 2704.0
14 TraesCS5D01G046900 chr3D 94.872 1014 19 3 688 1669 609330390 609329378 0.000000e+00 1554.0
15 TraesCS5D01G046900 chr3D 94.850 466 18 5 3102 3566 31793477 31793937 0.000000e+00 723.0
16 TraesCS5D01G046900 chr3D 96.508 315 11 0 685 999 98497433 98497747 4.080000e-144 521.0
17 TraesCS5D01G046900 chr7D 97.822 1928 40 2 987 2913 188838612 188840538 0.000000e+00 3326.0
18 TraesCS5D01G046900 chr7D 94.094 1016 28 7 686 1669 497919312 497918297 0.000000e+00 1515.0
19 TraesCS5D01G046900 chr7D 79.737 380 57 9 157 531 274857884 274857520 1.270000e-64 257.0
20 TraesCS5D01G046900 chr1D 98.162 1632 24 2 1199 2830 280841128 280842753 0.000000e+00 2843.0
21 TraesCS5D01G046900 chr1D 98.156 488 9 0 3079 3566 280843598 280844085 0.000000e+00 852.0
22 TraesCS5D01G046900 chr1D 96.805 313 10 0 687 999 280835337 280835649 1.130000e-144 523.0
23 TraesCS5D01G046900 chr1D 82.192 73 10 3 157 227 345056314 345056385 3.840000e-05 60.2
24 TraesCS5D01G046900 chr1A 89.917 605 52 7 2962 3562 517192153 517192752 0.000000e+00 771.0
25 TraesCS5D01G046900 chr5B 91.296 540 26 11 1 538 45353483 45352963 0.000000e+00 717.0
26 TraesCS5D01G046900 chr5B 95.745 47 2 0 641 687 45272298 45272252 3.820000e-10 76.8
27 TraesCS5D01G046900 chr5B 95.000 40 0 1 591 628 45352965 45352926 1.070000e-05 62.1
28 TraesCS5D01G046900 chr4A 88.430 605 56 7 2969 3564 358886607 358886008 0.000000e+00 717.0
29 TraesCS5D01G046900 chr2A 89.964 558 47 7 3011 3564 123639589 123640141 0.000000e+00 712.0
30 TraesCS5D01G046900 chr4D 96.474 312 11 0 688 999 494026357 494026668 1.900000e-142 516.0
31 TraesCS5D01G046900 chr3A 81.720 372 49 9 157 523 383096497 383096854 3.480000e-75 292.0
32 TraesCS5D01G046900 chr3A 77.812 329 61 7 200 523 665945890 665946211 3.630000e-45 193.0
33 TraesCS5D01G046900 chr3B 80.267 375 48 12 157 525 382709074 382709428 3.530000e-65 259.0
34 TraesCS5D01G046900 chr3B 78.378 370 67 12 157 523 166404063 166403704 9.960000e-56 228.0
35 TraesCS5D01G046900 chr3B 75.956 183 31 12 339 518 656596437 656596265 8.210000e-12 82.4
36 TraesCS5D01G046900 chr7A 81.040 327 50 9 200 524 422486664 422486348 2.130000e-62 250.0
37 TraesCS5D01G046900 chr7A 78.016 373 72 8 157 527 646830277 646830641 3.580000e-55 226.0
38 TraesCS5D01G046900 chr7A 74.899 247 51 8 273 515 12012633 12012394 6.300000e-18 102.0
39 TraesCS5D01G046900 chr7A 74.502 251 46 15 273 515 250859288 250859048 3.790000e-15 93.5
40 TraesCS5D01G046900 chr7A 76.163 172 26 12 349 515 96561460 96561299 3.820000e-10 76.8
41 TraesCS5D01G046900 chr6B 79.301 372 61 13 157 520 15864845 15865208 2.750000e-61 246.0
42 TraesCS5D01G046900 chr5A 82.000 250 41 4 203 450 352359255 352359502 3.610000e-50 209.0
43 TraesCS5D01G046900 chr5A 92.308 65 1 1 623 687 36291087 36291027 4.900000e-14 89.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G046900 chr5D 45350902 45354467 3565 True 6586.00 6586 100.0000 1 3566 1 chr5D.!!$R1 3565
1 TraesCS5D01G046900 chr5D 435192755 435195359 2604 False 4056.00 4056 95.0650 687 3247 1 chr5D.!!$F1 2560
2 TraesCS5D01G046900 chr5D 442964420 442967814 3394 False 2463.00 4120 96.0180 688 3566 2 chr5D.!!$F3 2878
3 TraesCS5D01G046900 chr2D 459776856 459780637 3781 False 2573.00 4266 97.8805 688 3566 2 chr2D.!!$F2 2878
4 TraesCS5D01G046900 chr2D 43889897 43893098 3201 False 636.00 756 95.9355 688 3566 2 chr2D.!!$F1 2878
5 TraesCS5D01G046900 chr6D 124597511 124600049 2538 False 4154.00 4154 96.4170 688 3192 1 chr6D.!!$F2 2504
6 TraesCS5D01G046900 chr6D 9124703 9127149 2446 False 4026.00 4026 96.5740 688 3105 1 chr6D.!!$F1 2417
7 TraesCS5D01G046900 chr6D 456315467 456316018 551 False 706.00 706 89.7850 3005 3558 1 chr6D.!!$F3 553
8 TraesCS5D01G046900 chr3D 31790294 31793937 3643 False 2349.00 3975 95.3585 688 3566 2 chr3D.!!$F2 2878
9 TraesCS5D01G046900 chr3D 609327661 609330390 2729 True 2129.00 2704 96.3230 688 3235 2 chr3D.!!$R1 2547
10 TraesCS5D01G046900 chr7D 188838612 188840538 1926 False 3326.00 3326 97.8220 987 2913 1 chr7D.!!$F1 1926
11 TraesCS5D01G046900 chr7D 497918297 497919312 1015 True 1515.00 1515 94.0940 686 1669 1 chr7D.!!$R2 983
12 TraesCS5D01G046900 chr1D 280841128 280844085 2957 False 1847.50 2843 98.1590 1199 3566 2 chr1D.!!$F3 2367
13 TraesCS5D01G046900 chr1A 517192153 517192752 599 False 771.00 771 89.9170 2962 3562 1 chr1A.!!$F1 600
14 TraesCS5D01G046900 chr5B 45352926 45353483 557 True 389.55 717 93.1480 1 628 2 chr5B.!!$R2 627
15 TraesCS5D01G046900 chr4A 358886008 358886607 599 True 717.00 717 88.4300 2969 3564 1 chr4A.!!$R1 595
16 TraesCS5D01G046900 chr2A 123639589 123640141 552 False 712.00 712 89.9640 3011 3564 1 chr2A.!!$F1 553

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
376 377 0.034670 AGCTCCTCAGATGCCCAAAC 60.035 55.0 0.00 0.0 0.00 2.93 F
682 683 0.105760 ACTGCTCCTCGATCCCTCAT 60.106 55.0 0.00 0.0 0.00 2.90 F
741 742 0.329931 TGGTGGCGAATTGGTACCAT 59.670 50.0 17.17 0.3 36.56 3.55 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1252 1284 1.191489 TCCCGTGCTTCTCACATGGA 61.191 55.000 3.58 0.0 45.46 3.41 R
2184 2481 1.561076 TGTGCCTTCATATCAGCCACT 59.439 47.619 0.00 0.0 0.00 4.00 R
2643 2941 6.419413 GCCATAGTTCATCTTAGAGAAGTTCG 59.581 42.308 0.00 0.0 34.03 3.95 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 4.520111 GTGACCCTTTTATTTACCGTTGGT 59.480 41.667 0.00 0.00 40.16 3.67
26 27 5.704978 GTGACCCTTTTATTTACCGTTGGTA 59.295 40.000 0.00 0.00 37.09 3.25
27 28 5.704978 TGACCCTTTTATTTACCGTTGGTAC 59.295 40.000 0.00 0.00 37.97 3.34
28 29 5.629125 ACCCTTTTATTTACCGTTGGTACA 58.371 37.500 0.00 0.00 37.97 2.90
52 53 9.139174 ACAAATTCAAATGCTATTTTTACTCCG 57.861 29.630 0.00 0.00 0.00 4.63
53 54 9.352784 CAAATTCAAATGCTATTTTTACTCCGA 57.647 29.630 0.00 0.00 0.00 4.55
54 55 8.911247 AATTCAAATGCTATTTTTACTCCGAC 57.089 30.769 0.00 0.00 0.00 4.79
55 56 7.441890 TTCAAATGCTATTTTTACTCCGACA 57.558 32.000 0.00 0.00 0.00 4.35
56 57 7.072177 TCAAATGCTATTTTTACTCCGACAG 57.928 36.000 0.00 0.00 0.00 3.51
57 58 6.093495 TCAAATGCTATTTTTACTCCGACAGG 59.907 38.462 0.00 0.00 39.46 4.00
58 59 3.267483 TGCTATTTTTACTCCGACAGGC 58.733 45.455 0.00 0.00 37.47 4.85
59 60 3.055385 TGCTATTTTTACTCCGACAGGCT 60.055 43.478 0.00 0.00 37.47 4.58
60 61 3.309954 GCTATTTTTACTCCGACAGGCTG 59.690 47.826 14.16 14.16 37.47 4.85
61 62 1.519408 TTTTTACTCCGACAGGCTGC 58.481 50.000 15.89 6.64 37.47 5.25
62 63 0.394938 TTTTACTCCGACAGGCTGCA 59.605 50.000 15.89 0.00 37.47 4.41
63 64 0.613260 TTTACTCCGACAGGCTGCAT 59.387 50.000 15.89 0.00 37.47 3.96
64 65 1.480789 TTACTCCGACAGGCTGCATA 58.519 50.000 15.89 0.00 37.47 3.14
65 66 0.744874 TACTCCGACAGGCTGCATAC 59.255 55.000 15.89 3.02 37.47 2.39
66 67 1.257750 ACTCCGACAGGCTGCATACA 61.258 55.000 15.89 0.00 37.47 2.29
67 68 0.108186 CTCCGACAGGCTGCATACAA 60.108 55.000 15.89 0.00 37.47 2.41
68 69 0.541392 TCCGACAGGCTGCATACAAT 59.459 50.000 15.89 0.00 37.47 2.71
69 70 1.065491 TCCGACAGGCTGCATACAATT 60.065 47.619 15.89 0.00 37.47 2.32
70 71 2.169561 TCCGACAGGCTGCATACAATTA 59.830 45.455 15.89 0.00 37.47 1.40
71 72 2.942376 CCGACAGGCTGCATACAATTAA 59.058 45.455 15.89 0.00 0.00 1.40
72 73 3.376859 CCGACAGGCTGCATACAATTAAA 59.623 43.478 15.89 0.00 0.00 1.52
73 74 4.496341 CCGACAGGCTGCATACAATTAAAG 60.496 45.833 15.89 0.00 0.00 1.85
74 75 4.332543 CGACAGGCTGCATACAATTAAAGA 59.667 41.667 15.89 0.00 0.00 2.52
75 76 5.163764 CGACAGGCTGCATACAATTAAAGAA 60.164 40.000 15.89 0.00 0.00 2.52
76 77 6.588719 ACAGGCTGCATACAATTAAAGAAA 57.411 33.333 15.89 0.00 0.00 2.52
77 78 6.624423 ACAGGCTGCATACAATTAAAGAAAG 58.376 36.000 15.89 0.00 0.00 2.62
78 79 6.209391 ACAGGCTGCATACAATTAAAGAAAGT 59.791 34.615 15.89 0.00 0.00 2.66
79 80 7.393234 ACAGGCTGCATACAATTAAAGAAAGTA 59.607 33.333 15.89 0.00 0.00 2.24
80 81 7.912250 CAGGCTGCATACAATTAAAGAAAGTAG 59.088 37.037 0.00 0.00 0.00 2.57
81 82 7.829211 AGGCTGCATACAATTAAAGAAAGTAGA 59.171 33.333 0.50 0.00 0.00 2.59
82 83 8.458843 GGCTGCATACAATTAAAGAAAGTAGAA 58.541 33.333 0.50 0.00 0.00 2.10
83 84 9.495754 GCTGCATACAATTAAAGAAAGTAGAAG 57.504 33.333 0.00 0.00 0.00 2.85
86 87 9.989869 GCATACAATTAAAGAAAGTAGAAGACC 57.010 33.333 0.00 0.00 0.00 3.85
134 135 3.655276 AGTCGTTCTACGTCCAATTGT 57.345 42.857 4.43 0.00 43.14 2.71
135 136 3.572584 AGTCGTTCTACGTCCAATTGTC 58.427 45.455 4.43 0.00 43.14 3.18
136 137 3.255149 AGTCGTTCTACGTCCAATTGTCT 59.745 43.478 4.43 0.00 43.14 3.41
137 138 3.985925 GTCGTTCTACGTCCAATTGTCTT 59.014 43.478 4.43 0.00 43.14 3.01
138 139 4.446719 GTCGTTCTACGTCCAATTGTCTTT 59.553 41.667 4.43 0.00 43.14 2.52
139 140 4.446385 TCGTTCTACGTCCAATTGTCTTTG 59.554 41.667 4.43 0.00 43.14 2.77
140 141 4.464112 GTTCTACGTCCAATTGTCTTTGC 58.536 43.478 4.43 0.00 0.00 3.68
141 142 3.734463 TCTACGTCCAATTGTCTTTGCA 58.266 40.909 4.43 0.00 0.00 4.08
142 143 4.323417 TCTACGTCCAATTGTCTTTGCAT 58.677 39.130 4.43 0.00 0.00 3.96
143 144 4.759693 TCTACGTCCAATTGTCTTTGCATT 59.240 37.500 4.43 0.00 0.00 3.56
144 145 5.935206 TCTACGTCCAATTGTCTTTGCATTA 59.065 36.000 4.43 0.00 0.00 1.90
145 146 5.643379 ACGTCCAATTGTCTTTGCATTAT 57.357 34.783 4.43 0.00 0.00 1.28
146 147 6.751514 ACGTCCAATTGTCTTTGCATTATA 57.248 33.333 4.43 0.00 0.00 0.98
147 148 7.151999 ACGTCCAATTGTCTTTGCATTATAA 57.848 32.000 4.43 0.00 0.00 0.98
148 149 7.771183 ACGTCCAATTGTCTTTGCATTATAAT 58.229 30.769 4.43 0.00 0.00 1.28
149 150 8.250332 ACGTCCAATTGTCTTTGCATTATAATT 58.750 29.630 4.43 0.00 0.00 1.40
150 151 8.533965 CGTCCAATTGTCTTTGCATTATAATTG 58.466 33.333 4.43 13.82 35.15 2.32
151 152 9.369904 GTCCAATTGTCTTTGCATTATAATTGT 57.630 29.630 16.86 0.00 34.14 2.71
152 153 9.585099 TCCAATTGTCTTTGCATTATAATTGTC 57.415 29.630 16.86 0.00 34.14 3.18
153 154 9.590451 CCAATTGTCTTTGCATTATAATTGTCT 57.410 29.630 16.86 0.00 34.14 3.41
219 220 8.915871 TTTTATTCTTTTGTGATGCTAGATGC 57.084 30.769 0.00 0.00 43.25 3.91
220 221 7.870509 TTATTCTTTTGTGATGCTAGATGCT 57.129 32.000 0.00 0.00 43.37 3.79
221 222 5.808042 TTCTTTTGTGATGCTAGATGCTC 57.192 39.130 0.00 0.00 43.37 4.26
222 223 4.835678 TCTTTTGTGATGCTAGATGCTCA 58.164 39.130 0.00 0.00 43.37 4.26
223 224 4.633126 TCTTTTGTGATGCTAGATGCTCAC 59.367 41.667 0.00 0.85 43.49 3.51
224 225 2.214387 TGTGATGCTAGATGCTCACG 57.786 50.000 0.00 0.00 44.75 4.35
225 226 1.478105 TGTGATGCTAGATGCTCACGT 59.522 47.619 0.00 0.00 44.75 4.49
226 227 1.857217 GTGATGCTAGATGCTCACGTG 59.143 52.381 9.94 9.94 43.37 4.49
227 228 0.857935 GATGCTAGATGCTCACGTGC 59.142 55.000 11.67 0.00 43.37 5.34
228 229 0.873312 ATGCTAGATGCTCACGTGCG 60.873 55.000 11.67 5.77 43.37 5.34
229 230 1.517257 GCTAGATGCTCACGTGCGT 60.517 57.895 11.67 0.45 38.95 5.24
230 231 1.746727 GCTAGATGCTCACGTGCGTG 61.747 60.000 17.44 17.44 46.64 5.34
239 240 3.951332 ACGTGCGTGAAGTCCATG 58.049 55.556 0.00 0.00 34.90 3.66
247 248 3.302365 CGTGAAGTCCATGCCAAATTT 57.698 42.857 0.00 0.00 0.00 1.82
248 249 3.244976 CGTGAAGTCCATGCCAAATTTC 58.755 45.455 0.00 0.00 0.00 2.17
249 250 3.305267 CGTGAAGTCCATGCCAAATTTCA 60.305 43.478 0.00 0.00 0.00 2.69
250 251 4.618927 CGTGAAGTCCATGCCAAATTTCAT 60.619 41.667 0.00 0.00 0.00 2.57
251 252 4.628333 GTGAAGTCCATGCCAAATTTCATG 59.372 41.667 11.22 11.22 39.67 3.07
257 258 4.730949 CATGCCAAATTTCATGGAGTCT 57.269 40.909 10.58 0.00 40.56 3.24
258 259 4.430007 CATGCCAAATTTCATGGAGTCTG 58.570 43.478 10.58 0.00 40.56 3.51
259 260 2.827322 TGCCAAATTTCATGGAGTCTGG 59.173 45.455 0.00 0.00 40.56 3.86
260 261 3.091545 GCCAAATTTCATGGAGTCTGGA 58.908 45.455 0.00 0.00 40.56 3.86
261 262 3.119352 GCCAAATTTCATGGAGTCTGGAC 60.119 47.826 0.00 0.00 40.56 4.02
262 263 4.081406 CCAAATTTCATGGAGTCTGGACA 58.919 43.478 3.51 0.00 40.56 4.02
263 264 4.708421 CCAAATTTCATGGAGTCTGGACAT 59.292 41.667 3.51 0.00 40.56 3.06
264 265 5.186409 CCAAATTTCATGGAGTCTGGACATT 59.814 40.000 3.51 0.00 40.56 2.71
265 266 6.295462 CCAAATTTCATGGAGTCTGGACATTT 60.295 38.462 3.51 0.00 40.56 2.32
266 267 6.521151 AATTTCATGGAGTCTGGACATTTC 57.479 37.500 3.51 0.00 0.00 2.17
267 268 4.639078 TTCATGGAGTCTGGACATTTCA 57.361 40.909 3.51 0.00 0.00 2.69
268 269 4.212143 TCATGGAGTCTGGACATTTCAG 57.788 45.455 3.51 0.00 0.00 3.02
269 270 3.584406 TCATGGAGTCTGGACATTTCAGT 59.416 43.478 3.51 0.00 34.15 3.41
270 271 4.777366 TCATGGAGTCTGGACATTTCAGTA 59.223 41.667 3.51 0.00 34.15 2.74
271 272 4.808414 TGGAGTCTGGACATTTCAGTAG 57.192 45.455 3.51 0.00 34.15 2.57
272 273 3.055819 TGGAGTCTGGACATTTCAGTAGC 60.056 47.826 3.51 0.00 34.15 3.58
273 274 3.196685 GGAGTCTGGACATTTCAGTAGCT 59.803 47.826 3.51 0.00 34.15 3.32
274 275 4.429108 GAGTCTGGACATTTCAGTAGCTC 58.571 47.826 0.00 0.00 34.15 4.09
275 276 4.093011 AGTCTGGACATTTCAGTAGCTCT 58.907 43.478 0.00 0.00 34.15 4.09
276 277 4.159506 AGTCTGGACATTTCAGTAGCTCTC 59.840 45.833 0.00 0.00 34.15 3.20
277 278 4.081972 GTCTGGACATTTCAGTAGCTCTCA 60.082 45.833 0.00 0.00 34.15 3.27
278 279 4.159321 TCTGGACATTTCAGTAGCTCTCAG 59.841 45.833 0.00 0.00 34.15 3.35
279 280 3.194062 GGACATTTCAGTAGCTCTCAGC 58.806 50.000 0.00 0.00 42.84 4.26
280 281 3.368843 GGACATTTCAGTAGCTCTCAGCA 60.369 47.826 0.00 0.00 45.56 4.41
281 282 4.248859 GACATTTCAGTAGCTCTCAGCAA 58.751 43.478 0.00 0.00 45.56 3.91
282 283 4.645535 ACATTTCAGTAGCTCTCAGCAAA 58.354 39.130 0.00 0.00 45.56 3.68
283 284 5.065914 ACATTTCAGTAGCTCTCAGCAAAA 58.934 37.500 0.00 0.00 45.56 2.44
284 285 5.532406 ACATTTCAGTAGCTCTCAGCAAAAA 59.468 36.000 0.00 0.00 45.56 1.94
285 286 5.424121 TTTCAGTAGCTCTCAGCAAAAAC 57.576 39.130 0.00 0.00 45.56 2.43
286 287 3.059884 TCAGTAGCTCTCAGCAAAAACG 58.940 45.455 0.00 0.00 45.56 3.60
287 288 3.059884 CAGTAGCTCTCAGCAAAAACGA 58.940 45.455 0.00 0.00 45.56 3.85
288 289 3.681897 CAGTAGCTCTCAGCAAAAACGAT 59.318 43.478 0.00 0.00 45.56 3.73
289 290 4.864806 CAGTAGCTCTCAGCAAAAACGATA 59.135 41.667 0.00 0.00 45.56 2.92
290 291 5.348724 CAGTAGCTCTCAGCAAAAACGATAA 59.651 40.000 0.00 0.00 45.56 1.75
291 292 5.932303 AGTAGCTCTCAGCAAAAACGATAAA 59.068 36.000 0.00 0.00 45.56 1.40
292 293 5.886960 AGCTCTCAGCAAAAACGATAAAT 57.113 34.783 0.00 0.00 45.56 1.40
293 294 6.259550 AGCTCTCAGCAAAAACGATAAATT 57.740 33.333 0.00 0.00 45.56 1.82
294 295 6.681777 AGCTCTCAGCAAAAACGATAAATTT 58.318 32.000 0.00 0.00 45.56 1.82
295 296 7.147976 AGCTCTCAGCAAAAACGATAAATTTT 58.852 30.769 0.00 0.00 45.56 1.82
296 297 7.115378 AGCTCTCAGCAAAAACGATAAATTTTG 59.885 33.333 0.00 6.61 45.56 2.44
297 298 7.619982 GCTCTCAGCAAAAACGATAAATTTTGG 60.620 37.037 11.55 0.00 43.41 3.28
298 299 7.429633 TCTCAGCAAAAACGATAAATTTTGGA 58.570 30.769 11.55 2.84 43.41 3.53
299 300 7.594758 TCTCAGCAAAAACGATAAATTTTGGAG 59.405 33.333 11.55 10.24 43.41 3.86
300 301 6.145371 TCAGCAAAAACGATAAATTTTGGAGC 59.855 34.615 11.55 3.70 43.41 4.70
301 302 6.146021 CAGCAAAAACGATAAATTTTGGAGCT 59.854 34.615 11.55 0.00 43.41 4.09
302 303 6.146021 AGCAAAAACGATAAATTTTGGAGCTG 59.854 34.615 11.55 0.00 43.41 4.24
303 304 6.073819 GCAAAAACGATAAATTTTGGAGCTGT 60.074 34.615 11.55 0.00 43.41 4.40
304 305 7.115663 GCAAAAACGATAAATTTTGGAGCTGTA 59.884 33.333 11.55 0.00 43.41 2.74
305 306 8.973378 CAAAAACGATAAATTTTGGAGCTGTAA 58.027 29.630 0.00 0.00 40.90 2.41
306 307 8.742554 AAAACGATAAATTTTGGAGCTGTAAG 57.257 30.769 0.00 0.00 0.00 2.34
307 308 7.681939 AACGATAAATTTTGGAGCTGTAAGA 57.318 32.000 0.00 0.00 34.07 2.10
308 309 7.681939 ACGATAAATTTTGGAGCTGTAAGAA 57.318 32.000 0.00 0.00 34.07 2.52
309 310 8.106247 ACGATAAATTTTGGAGCTGTAAGAAA 57.894 30.769 0.00 0.00 34.07 2.52
310 311 8.237267 ACGATAAATTTTGGAGCTGTAAGAAAG 58.763 33.333 0.00 0.00 34.07 2.62
311 312 8.237267 CGATAAATTTTGGAGCTGTAAGAAAGT 58.763 33.333 0.00 0.00 34.07 2.66
312 313 9.346725 GATAAATTTTGGAGCTGTAAGAAAGTG 57.653 33.333 0.00 0.00 34.07 3.16
313 314 6.715347 AATTTTGGAGCTGTAAGAAAGTGT 57.285 33.333 0.00 0.00 34.07 3.55
314 315 7.817418 AATTTTGGAGCTGTAAGAAAGTGTA 57.183 32.000 0.00 0.00 34.07 2.90
315 316 6.613755 TTTTGGAGCTGTAAGAAAGTGTAC 57.386 37.500 0.00 0.00 34.07 2.90
316 317 5.546621 TTGGAGCTGTAAGAAAGTGTACT 57.453 39.130 0.00 0.00 34.07 2.73
317 318 4.883083 TGGAGCTGTAAGAAAGTGTACTG 58.117 43.478 0.00 0.00 34.07 2.74
318 319 4.344102 TGGAGCTGTAAGAAAGTGTACTGT 59.656 41.667 0.00 0.00 34.07 3.55
319 320 5.163343 TGGAGCTGTAAGAAAGTGTACTGTT 60.163 40.000 0.00 0.00 34.07 3.16
320 321 5.405873 GGAGCTGTAAGAAAGTGTACTGTTC 59.594 44.000 0.00 0.00 34.07 3.18
321 322 5.914033 AGCTGTAAGAAAGTGTACTGTTCA 58.086 37.500 0.00 0.00 34.07 3.18
322 323 6.525629 AGCTGTAAGAAAGTGTACTGTTCAT 58.474 36.000 0.00 0.00 34.07 2.57
323 324 6.425114 AGCTGTAAGAAAGTGTACTGTTCATG 59.575 38.462 0.00 0.00 34.07 3.07
324 325 6.202954 GCTGTAAGAAAGTGTACTGTTCATGT 59.797 38.462 0.00 0.00 34.07 3.21
325 326 7.384115 GCTGTAAGAAAGTGTACTGTTCATGTA 59.616 37.037 0.00 0.00 34.07 2.29
326 327 8.583810 TGTAAGAAAGTGTACTGTTCATGTAC 57.416 34.615 0.00 0.00 40.27 2.90
327 328 8.418662 TGTAAGAAAGTGTACTGTTCATGTACT 58.581 33.333 4.01 0.00 40.44 2.73
328 329 7.715265 AAGAAAGTGTACTGTTCATGTACTG 57.285 36.000 7.64 7.64 40.44 2.74
329 330 5.696724 AGAAAGTGTACTGTTCATGTACTGC 59.303 40.000 8.88 0.00 40.44 4.40
330 331 4.873746 AGTGTACTGTTCATGTACTGCT 57.126 40.909 8.88 1.14 40.44 4.24
331 332 5.215252 AGTGTACTGTTCATGTACTGCTT 57.785 39.130 8.88 0.00 40.44 3.91
332 333 5.230942 AGTGTACTGTTCATGTACTGCTTC 58.769 41.667 8.88 2.16 40.44 3.86
333 334 4.090066 GTGTACTGTTCATGTACTGCTTCG 59.910 45.833 8.88 0.00 40.44 3.79
334 335 3.660501 ACTGTTCATGTACTGCTTCGA 57.339 42.857 8.88 0.00 0.00 3.71
335 336 3.318017 ACTGTTCATGTACTGCTTCGAC 58.682 45.455 8.88 0.00 0.00 4.20
336 337 3.005897 ACTGTTCATGTACTGCTTCGACT 59.994 43.478 8.88 0.00 0.00 4.18
337 338 3.317150 TGTTCATGTACTGCTTCGACTG 58.683 45.455 4.01 0.00 0.00 3.51
338 339 3.005367 TGTTCATGTACTGCTTCGACTGA 59.995 43.478 4.01 0.00 0.00 3.41
339 340 3.934457 TCATGTACTGCTTCGACTGAA 57.066 42.857 0.00 0.00 0.00 3.02
340 341 4.456280 TCATGTACTGCTTCGACTGAAT 57.544 40.909 0.00 0.00 32.61 2.57
341 342 4.820897 TCATGTACTGCTTCGACTGAATT 58.179 39.130 0.00 0.00 32.61 2.17
342 343 5.237815 TCATGTACTGCTTCGACTGAATTT 58.762 37.500 0.00 0.00 32.61 1.82
343 344 5.700832 TCATGTACTGCTTCGACTGAATTTT 59.299 36.000 0.00 0.00 32.61 1.82
344 345 6.204688 TCATGTACTGCTTCGACTGAATTTTT 59.795 34.615 0.00 0.00 32.61 1.94
345 346 5.985781 TGTACTGCTTCGACTGAATTTTTC 58.014 37.500 0.00 0.00 32.61 2.29
346 347 5.758296 TGTACTGCTTCGACTGAATTTTTCT 59.242 36.000 0.00 0.00 32.61 2.52
347 348 5.757850 ACTGCTTCGACTGAATTTTTCTT 57.242 34.783 0.00 0.00 32.61 2.52
348 349 6.136541 ACTGCTTCGACTGAATTTTTCTTT 57.863 33.333 0.00 0.00 32.61 2.52
349 350 6.564328 ACTGCTTCGACTGAATTTTTCTTTT 58.436 32.000 0.00 0.00 32.61 2.27
350 351 7.035612 ACTGCTTCGACTGAATTTTTCTTTTT 58.964 30.769 0.00 0.00 32.61 1.94
370 371 4.416533 CGTGAGCTCCTCAGATGC 57.583 61.111 12.15 0.00 41.46 3.91
371 372 1.227205 CGTGAGCTCCTCAGATGCC 60.227 63.158 12.15 0.00 41.46 4.40
372 373 1.145819 GTGAGCTCCTCAGATGCCC 59.854 63.158 12.15 0.00 41.46 5.36
373 374 1.306397 TGAGCTCCTCAGATGCCCA 60.306 57.895 12.15 0.00 35.39 5.36
374 375 0.911045 TGAGCTCCTCAGATGCCCAA 60.911 55.000 12.15 0.00 35.39 4.12
375 376 0.254178 GAGCTCCTCAGATGCCCAAA 59.746 55.000 0.87 0.00 0.00 3.28
376 377 0.034670 AGCTCCTCAGATGCCCAAAC 60.035 55.000 0.00 0.00 0.00 2.93
377 378 0.322816 GCTCCTCAGATGCCCAAACA 60.323 55.000 0.00 0.00 0.00 2.83
378 379 1.887956 GCTCCTCAGATGCCCAAACAA 60.888 52.381 0.00 0.00 0.00 2.83
379 380 2.517959 CTCCTCAGATGCCCAAACAAA 58.482 47.619 0.00 0.00 0.00 2.83
380 381 3.094572 CTCCTCAGATGCCCAAACAAAT 58.905 45.455 0.00 0.00 0.00 2.32
381 382 3.509442 TCCTCAGATGCCCAAACAAATT 58.491 40.909 0.00 0.00 0.00 1.82
382 383 3.258872 TCCTCAGATGCCCAAACAAATTG 59.741 43.478 0.00 0.00 38.84 2.32
383 384 3.258872 CCTCAGATGCCCAAACAAATTGA 59.741 43.478 0.00 0.00 41.85 2.57
384 385 4.262549 CCTCAGATGCCCAAACAAATTGAA 60.263 41.667 0.00 0.00 41.85 2.69
385 386 5.287674 TCAGATGCCCAAACAAATTGAAA 57.712 34.783 0.00 0.00 41.85 2.69
386 387 5.867330 TCAGATGCCCAAACAAATTGAAAT 58.133 33.333 0.00 0.00 41.85 2.17
387 388 6.297582 TCAGATGCCCAAACAAATTGAAATT 58.702 32.000 0.00 0.00 41.85 1.82
388 389 6.771749 TCAGATGCCCAAACAAATTGAAATTT 59.228 30.769 0.00 0.00 41.85 1.82
400 401 6.746745 AAATTGAAATTTGGCATGGACATC 57.253 33.333 0.00 0.00 37.24 3.06
401 402 4.886496 TTGAAATTTGGCATGGACATCA 57.114 36.364 0.00 0.00 0.00 3.07
402 403 4.191033 TGAAATTTGGCATGGACATCAC 57.809 40.909 0.00 0.00 0.00 3.06
403 404 2.945447 AATTTGGCATGGACATCACG 57.055 45.000 0.00 0.00 0.00 4.35
404 405 1.838112 ATTTGGCATGGACATCACGT 58.162 45.000 0.00 0.00 0.00 4.49
405 406 2.481289 TTTGGCATGGACATCACGTA 57.519 45.000 0.00 0.00 0.00 3.57
406 407 2.708216 TTGGCATGGACATCACGTAT 57.292 45.000 0.00 0.00 0.00 3.06
407 408 2.708216 TGGCATGGACATCACGTATT 57.292 45.000 0.00 0.00 0.00 1.89
408 409 2.287769 TGGCATGGACATCACGTATTG 58.712 47.619 0.00 0.00 0.00 1.90
409 410 2.093235 TGGCATGGACATCACGTATTGA 60.093 45.455 4.10 0.00 39.11 2.57
410 411 2.942376 GGCATGGACATCACGTATTGAA 59.058 45.455 4.10 0.00 37.92 2.69
411 412 3.376859 GGCATGGACATCACGTATTGAAA 59.623 43.478 4.10 0.00 37.92 2.69
412 413 4.342772 GCATGGACATCACGTATTGAAAC 58.657 43.478 4.10 0.00 37.92 2.78
413 414 4.142708 GCATGGACATCACGTATTGAAACA 60.143 41.667 4.10 1.23 37.92 2.83
414 415 5.449041 GCATGGACATCACGTATTGAAACAT 60.449 40.000 4.10 3.13 37.92 2.71
415 416 5.794687 TGGACATCACGTATTGAAACATC 57.205 39.130 4.10 0.00 37.92 3.06
416 417 5.487433 TGGACATCACGTATTGAAACATCT 58.513 37.500 4.10 0.00 37.92 2.90
417 418 5.937540 TGGACATCACGTATTGAAACATCTT 59.062 36.000 4.10 0.00 37.92 2.40
418 419 6.092122 TGGACATCACGTATTGAAACATCTTC 59.908 38.462 4.10 0.00 37.92 2.87
419 420 6.422776 ACATCACGTATTGAAACATCTTCC 57.577 37.500 4.10 0.00 37.92 3.46
420 421 5.937540 ACATCACGTATTGAAACATCTTCCA 59.062 36.000 4.10 0.00 37.92 3.53
421 422 6.599244 ACATCACGTATTGAAACATCTTCCAT 59.401 34.615 4.10 0.00 37.92 3.41
422 423 6.662414 TCACGTATTGAAACATCTTCCATC 57.338 37.500 0.00 0.00 0.00 3.51
423 424 6.406370 TCACGTATTGAAACATCTTCCATCT 58.594 36.000 0.00 0.00 0.00 2.90
424 425 7.552459 TCACGTATTGAAACATCTTCCATCTA 58.448 34.615 0.00 0.00 0.00 1.98
425 426 8.038351 TCACGTATTGAAACATCTTCCATCTAA 58.962 33.333 0.00 0.00 0.00 2.10
426 427 8.331022 CACGTATTGAAACATCTTCCATCTAAG 58.669 37.037 0.00 0.00 0.00 2.18
427 428 8.258007 ACGTATTGAAACATCTTCCATCTAAGA 58.742 33.333 0.00 0.00 39.71 2.10
428 429 9.098355 CGTATTGAAACATCTTCCATCTAAGAA 57.902 33.333 0.00 0.00 38.90 2.52
436 437 9.745018 AACATCTTCCATCTAAGAAATTTCAGA 57.255 29.630 19.99 14.52 38.90 3.27
437 438 9.745018 ACATCTTCCATCTAAGAAATTTCAGAA 57.255 29.630 19.99 9.42 38.90 3.02
486 487 6.490566 TTTGAGTTTATTTACTCTTCGCCC 57.509 37.500 0.00 0.00 43.92 6.13
487 488 4.178540 TGAGTTTATTTACTCTTCGCCCG 58.821 43.478 0.00 0.00 43.92 6.13
488 489 3.528532 AGTTTATTTACTCTTCGCCCGG 58.471 45.455 0.00 0.00 0.00 5.73
489 490 3.055602 AGTTTATTTACTCTTCGCCCGGT 60.056 43.478 0.00 0.00 0.00 5.28
490 491 2.589798 TATTTACTCTTCGCCCGGTG 57.410 50.000 0.00 0.00 0.00 4.94
491 492 0.743345 ATTTACTCTTCGCCCGGTGC 60.743 55.000 0.00 2.24 0.00 5.01
492 493 2.102109 TTTACTCTTCGCCCGGTGCA 62.102 55.000 14.17 0.00 41.33 4.57
493 494 2.501223 TTACTCTTCGCCCGGTGCAG 62.501 60.000 14.17 6.98 41.33 4.41
494 495 4.069232 CTCTTCGCCCGGTGCAGA 62.069 66.667 14.17 0.21 41.33 4.26
495 496 3.376935 CTCTTCGCCCGGTGCAGAT 62.377 63.158 14.17 0.00 41.33 2.90
496 497 3.197790 CTTCGCCCGGTGCAGATG 61.198 66.667 14.17 10.27 41.33 2.90
497 498 3.664025 CTTCGCCCGGTGCAGATGA 62.664 63.158 14.17 1.88 41.33 2.92
498 499 3.664025 TTCGCCCGGTGCAGATGAG 62.664 63.158 14.17 0.00 41.33 2.90
501 502 3.790437 CCCGGTGCAGATGAGCCT 61.790 66.667 0.00 0.00 0.00 4.58
502 503 2.513204 CCGGTGCAGATGAGCCTG 60.513 66.667 0.00 0.00 37.23 4.85
503 504 2.513204 CGGTGCAGATGAGCCTGG 60.513 66.667 0.00 0.00 34.82 4.45
504 505 2.124403 GGTGCAGATGAGCCTGGG 60.124 66.667 0.00 0.00 34.82 4.45
505 506 2.827642 GTGCAGATGAGCCTGGGC 60.828 66.667 3.00 3.00 42.33 5.36
506 507 3.332385 TGCAGATGAGCCTGGGCA 61.332 61.111 14.39 0.00 44.88 5.36
507 508 2.827642 GCAGATGAGCCTGGGCAC 60.828 66.667 14.39 8.23 44.88 5.01
522 523 1.535462 GGGCACCGAATTGAATATCCG 59.465 52.381 0.00 0.00 40.86 4.18
523 524 2.218603 GGCACCGAATTGAATATCCGT 58.781 47.619 0.00 0.00 0.00 4.69
524 525 3.395639 GGCACCGAATTGAATATCCGTA 58.604 45.455 0.00 0.00 0.00 4.02
525 526 4.000988 GGCACCGAATTGAATATCCGTAT 58.999 43.478 0.00 0.00 0.00 3.06
526 527 4.454504 GGCACCGAATTGAATATCCGTATT 59.545 41.667 0.00 0.00 33.26 1.89
527 528 5.382303 GCACCGAATTGAATATCCGTATTG 58.618 41.667 0.00 0.00 30.75 1.90
528 529 5.178623 GCACCGAATTGAATATCCGTATTGA 59.821 40.000 0.00 0.00 30.75 2.57
529 530 6.293190 GCACCGAATTGAATATCCGTATTGAA 60.293 38.462 0.00 0.00 30.75 2.69
530 531 7.290842 CACCGAATTGAATATCCGTATTGAAG 58.709 38.462 0.00 0.00 29.08 3.02
531 532 6.073222 ACCGAATTGAATATCCGTATTGAAGC 60.073 38.462 0.00 0.00 29.08 3.86
532 533 6.307155 CGAATTGAATATCCGTATTGAAGCC 58.693 40.000 0.00 0.00 29.08 4.35
533 534 6.575162 AATTGAATATCCGTATTGAAGCCC 57.425 37.500 0.00 0.00 29.08 5.19
534 535 4.698201 TGAATATCCGTATTGAAGCCCA 57.302 40.909 0.00 0.00 30.75 5.36
535 536 5.042463 TGAATATCCGTATTGAAGCCCAA 57.958 39.130 0.00 0.00 39.41 4.12
536 537 5.630121 TGAATATCCGTATTGAAGCCCAAT 58.370 37.500 7.06 7.06 46.52 3.16
537 538 6.068010 TGAATATCCGTATTGAAGCCCAATT 58.932 36.000 7.17 0.00 42.55 2.32
538 539 6.549364 TGAATATCCGTATTGAAGCCCAATTT 59.451 34.615 7.17 0.00 42.55 1.82
539 540 7.721842 TGAATATCCGTATTGAAGCCCAATTTA 59.278 33.333 7.17 0.00 42.55 1.40
540 541 5.767816 ATCCGTATTGAAGCCCAATTTAC 57.232 39.130 7.17 1.20 42.55 2.01
541 542 4.850680 TCCGTATTGAAGCCCAATTTACT 58.149 39.130 7.17 0.00 42.55 2.24
542 543 4.879545 TCCGTATTGAAGCCCAATTTACTC 59.120 41.667 7.17 0.00 42.55 2.59
543 544 4.881850 CCGTATTGAAGCCCAATTTACTCT 59.118 41.667 7.17 0.00 42.55 3.24
544 545 5.357032 CCGTATTGAAGCCCAATTTACTCTT 59.643 40.000 7.17 0.00 42.55 2.85
545 546 6.458342 CCGTATTGAAGCCCAATTTACTCTTC 60.458 42.308 7.17 0.00 42.55 2.87
546 547 5.921962 ATTGAAGCCCAATTTACTCTTCC 57.078 39.130 0.00 0.00 42.55 3.46
547 548 3.697166 TGAAGCCCAATTTACTCTTCCC 58.303 45.455 0.00 0.00 33.99 3.97
548 549 2.828661 AGCCCAATTTACTCTTCCCC 57.171 50.000 0.00 0.00 0.00 4.81
549 550 1.064685 AGCCCAATTTACTCTTCCCCG 60.065 52.381 0.00 0.00 0.00 5.73
550 551 1.389555 CCCAATTTACTCTTCCCCGC 58.610 55.000 0.00 0.00 0.00 6.13
551 552 1.064685 CCCAATTTACTCTTCCCCGCT 60.065 52.381 0.00 0.00 0.00 5.52
552 553 2.171870 CCCAATTTACTCTTCCCCGCTA 59.828 50.000 0.00 0.00 0.00 4.26
553 554 3.371166 CCCAATTTACTCTTCCCCGCTAA 60.371 47.826 0.00 0.00 0.00 3.09
554 555 4.266714 CCAATTTACTCTTCCCCGCTAAA 58.733 43.478 0.00 0.00 0.00 1.85
555 556 4.703093 CCAATTTACTCTTCCCCGCTAAAA 59.297 41.667 0.00 0.00 0.00 1.52
556 557 5.184287 CCAATTTACTCTTCCCCGCTAAAAA 59.816 40.000 0.00 0.00 0.00 1.94
573 574 3.131850 AAAAAGCCCAGTGACCCAG 57.868 52.632 0.00 0.00 0.00 4.45
574 575 0.261696 AAAAAGCCCAGTGACCCAGT 59.738 50.000 0.00 0.00 0.00 4.00
575 576 0.178990 AAAAGCCCAGTGACCCAGTC 60.179 55.000 0.00 0.00 0.00 3.51
576 577 1.062488 AAAGCCCAGTGACCCAGTCT 61.062 55.000 0.00 0.00 33.15 3.24
577 578 0.178903 AAGCCCAGTGACCCAGTCTA 60.179 55.000 0.00 0.00 33.15 2.59
578 579 0.905337 AGCCCAGTGACCCAGTCTAC 60.905 60.000 0.00 0.00 33.15 2.59
579 580 0.905337 GCCCAGTGACCCAGTCTACT 60.905 60.000 0.00 0.00 33.15 2.57
580 581 1.187087 CCCAGTGACCCAGTCTACTC 58.813 60.000 0.00 0.00 33.15 2.59
581 582 1.272760 CCCAGTGACCCAGTCTACTCT 60.273 57.143 0.00 0.00 33.15 3.24
582 583 2.025226 CCCAGTGACCCAGTCTACTCTA 60.025 54.545 0.00 0.00 33.15 2.43
583 584 3.373220 CCCAGTGACCCAGTCTACTCTAT 60.373 52.174 0.00 0.00 33.15 1.98
584 585 4.141228 CCCAGTGACCCAGTCTACTCTATA 60.141 50.000 0.00 0.00 33.15 1.31
585 586 5.458362 CCCAGTGACCCAGTCTACTCTATAT 60.458 48.000 0.00 0.00 33.15 0.86
586 587 5.708230 CCAGTGACCCAGTCTACTCTATATC 59.292 48.000 0.00 0.00 33.15 1.63
587 588 6.466615 CCAGTGACCCAGTCTACTCTATATCT 60.467 46.154 0.00 0.00 33.15 1.98
588 589 7.256727 CCAGTGACCCAGTCTACTCTATATCTA 60.257 44.444 0.00 0.00 33.15 1.98
589 590 8.325787 CAGTGACCCAGTCTACTCTATATCTAT 58.674 40.741 0.00 0.00 33.15 1.98
590 591 9.563593 AGTGACCCAGTCTACTCTATATCTATA 57.436 37.037 0.00 0.00 33.15 1.31
608 609 7.904558 ATCTATATTCAGGCTCATAATCCGA 57.095 36.000 0.00 0.00 0.00 4.55
609 610 7.718334 TCTATATTCAGGCTCATAATCCGAA 57.282 36.000 0.00 0.00 0.00 4.30
610 611 7.548097 TCTATATTCAGGCTCATAATCCGAAC 58.452 38.462 0.00 0.00 0.00 3.95
611 612 2.910688 TCAGGCTCATAATCCGAACC 57.089 50.000 0.00 0.00 0.00 3.62
612 613 2.115427 TCAGGCTCATAATCCGAACCA 58.885 47.619 0.00 0.00 0.00 3.67
613 614 2.503765 TCAGGCTCATAATCCGAACCAA 59.496 45.455 0.00 0.00 0.00 3.67
614 615 2.614057 CAGGCTCATAATCCGAACCAAC 59.386 50.000 0.00 0.00 0.00 3.77
615 616 1.947456 GGCTCATAATCCGAACCAACC 59.053 52.381 0.00 0.00 0.00 3.77
616 617 1.947456 GCTCATAATCCGAACCAACCC 59.053 52.381 0.00 0.00 0.00 4.11
617 618 2.682563 GCTCATAATCCGAACCAACCCA 60.683 50.000 0.00 0.00 0.00 4.51
618 619 3.206150 CTCATAATCCGAACCAACCCAG 58.794 50.000 0.00 0.00 0.00 4.45
619 620 2.574369 TCATAATCCGAACCAACCCAGT 59.426 45.455 0.00 0.00 0.00 4.00
620 621 3.009695 TCATAATCCGAACCAACCCAGTT 59.990 43.478 0.00 0.00 0.00 3.16
621 622 2.375014 AATCCGAACCAACCCAGTTT 57.625 45.000 0.00 0.00 0.00 2.66
622 623 3.512219 AATCCGAACCAACCCAGTTTA 57.488 42.857 0.00 0.00 0.00 2.01
623 624 2.259266 TCCGAACCAACCCAGTTTAC 57.741 50.000 0.00 0.00 0.00 2.01
624 625 1.202794 TCCGAACCAACCCAGTTTACC 60.203 52.381 0.00 0.00 0.00 2.85
625 626 1.202842 CCGAACCAACCCAGTTTACCT 60.203 52.381 0.00 0.00 0.00 3.08
626 627 2.578786 CGAACCAACCCAGTTTACCTT 58.421 47.619 0.00 0.00 0.00 3.50
627 628 3.496515 CCGAACCAACCCAGTTTACCTTA 60.497 47.826 0.00 0.00 0.00 2.69
628 629 3.499537 CGAACCAACCCAGTTTACCTTAC 59.500 47.826 0.00 0.00 0.00 2.34
629 630 4.722220 GAACCAACCCAGTTTACCTTACT 58.278 43.478 0.00 0.00 0.00 2.24
630 631 5.511202 CGAACCAACCCAGTTTACCTTACTA 60.511 44.000 0.00 0.00 0.00 1.82
631 632 5.494390 ACCAACCCAGTTTACCTTACTAG 57.506 43.478 0.00 0.00 0.00 2.57
632 633 4.909695 ACCAACCCAGTTTACCTTACTAGT 59.090 41.667 0.00 0.00 0.00 2.57
633 634 6.084060 ACCAACCCAGTTTACCTTACTAGTA 58.916 40.000 0.00 0.00 0.00 1.82
634 635 6.732390 ACCAACCCAGTTTACCTTACTAGTAT 59.268 38.462 2.79 0.00 0.00 2.12
635 636 7.238305 ACCAACCCAGTTTACCTTACTAGTATT 59.762 37.037 2.79 0.00 0.00 1.89
636 637 8.105197 CCAACCCAGTTTACCTTACTAGTATTT 58.895 37.037 2.79 0.00 0.00 1.40
637 638 9.159364 CAACCCAGTTTACCTTACTAGTATTTC 57.841 37.037 2.79 0.00 0.00 2.17
638 639 8.676397 ACCCAGTTTACCTTACTAGTATTTCT 57.324 34.615 2.79 0.00 0.00 2.52
639 640 8.756927 ACCCAGTTTACCTTACTAGTATTTCTC 58.243 37.037 2.79 0.00 0.00 2.87
640 641 8.755977 CCCAGTTTACCTTACTAGTATTTCTCA 58.244 37.037 2.79 0.00 0.00 3.27
670 671 6.387041 AAAAACAGTTTACCTTACTGCTCC 57.613 37.500 0.00 0.00 45.38 4.70
671 672 4.976540 AACAGTTTACCTTACTGCTCCT 57.023 40.909 0.00 0.00 45.38 3.69
672 673 4.538746 ACAGTTTACCTTACTGCTCCTC 57.461 45.455 0.00 0.00 45.38 3.71
673 674 3.056749 ACAGTTTACCTTACTGCTCCTCG 60.057 47.826 0.00 0.00 45.38 4.63
674 675 3.192844 CAGTTTACCTTACTGCTCCTCGA 59.807 47.826 0.00 0.00 36.88 4.04
675 676 4.024670 AGTTTACCTTACTGCTCCTCGAT 58.975 43.478 0.00 0.00 0.00 3.59
676 677 4.098196 AGTTTACCTTACTGCTCCTCGATC 59.902 45.833 0.00 0.00 0.00 3.69
677 678 1.404843 ACCTTACTGCTCCTCGATCC 58.595 55.000 0.00 0.00 0.00 3.36
678 679 0.676736 CCTTACTGCTCCTCGATCCC 59.323 60.000 0.00 0.00 0.00 3.85
679 680 1.698506 CTTACTGCTCCTCGATCCCT 58.301 55.000 0.00 0.00 0.00 4.20
680 681 1.611491 CTTACTGCTCCTCGATCCCTC 59.389 57.143 0.00 0.00 0.00 4.30
681 682 0.551396 TACTGCTCCTCGATCCCTCA 59.449 55.000 0.00 0.00 0.00 3.86
682 683 0.105760 ACTGCTCCTCGATCCCTCAT 60.106 55.000 0.00 0.00 0.00 2.90
683 684 0.602562 CTGCTCCTCGATCCCTCATC 59.397 60.000 0.00 0.00 0.00 2.92
684 685 0.829602 TGCTCCTCGATCCCTCATCC 60.830 60.000 0.00 0.00 0.00 3.51
685 686 1.540435 GCTCCTCGATCCCTCATCCC 61.540 65.000 0.00 0.00 0.00 3.85
741 742 0.329931 TGGTGGCGAATTGGTACCAT 59.670 50.000 17.17 0.30 36.56 3.55
817 818 7.255491 TCGAGCTAATCTTCGTATTTCTACA 57.745 36.000 0.00 0.00 0.00 2.74
1252 1284 2.693069 CTTGAGCTGGAAACGATGTCT 58.307 47.619 0.00 0.00 0.00 3.41
1451 1483 7.071196 ACATGACTACAAGGCCTGATTATTAGA 59.929 37.037 5.69 0.00 0.00 2.10
1484 1516 2.330254 GCAACAGCAGTGGCAGTAA 58.670 52.632 3.31 0.00 44.46 2.24
2121 2418 0.707024 TGAGCTTCCAGGAGGAGAGA 59.293 55.000 1.81 0.00 46.74 3.10
2643 2941 6.421202 GTGTAGTGTATGGCTCTACTAAATGC 59.579 42.308 0.00 0.00 41.93 3.56
2787 3086 9.209048 TGTGTACCCTATAATATGTTGAACTCT 57.791 33.333 0.00 0.00 0.00 3.24
2854 3153 8.746530 GTTATATCATGCATTGGAAGATGGATT 58.253 33.333 0.00 0.00 36.14 3.01
2998 3346 4.397919 AATGGTTAGGTTTAGGTGGCTT 57.602 40.909 0.00 0.00 0.00 4.35
3318 6564 6.011717 TCCATATGACCATAGCCACCATAAAT 60.012 38.462 3.65 0.00 0.00 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 9.139174 CGGAGTAAAAATAGCATTTGAATTTGT 57.861 29.630 0.00 0.00 0.00 2.83
27 28 9.352784 TCGGAGTAAAAATAGCATTTGAATTTG 57.647 29.630 0.00 0.00 0.00 2.32
28 29 9.353999 GTCGGAGTAAAAATAGCATTTGAATTT 57.646 29.630 0.00 0.00 0.00 1.82
29 30 8.519526 TGTCGGAGTAAAAATAGCATTTGAATT 58.480 29.630 0.00 0.00 0.00 2.17
30 31 8.050778 TGTCGGAGTAAAAATAGCATTTGAAT 57.949 30.769 0.00 0.00 0.00 2.57
31 32 7.361713 CCTGTCGGAGTAAAAATAGCATTTGAA 60.362 37.037 0.00 0.00 0.00 2.69
32 33 6.093495 CCTGTCGGAGTAAAAATAGCATTTGA 59.907 38.462 0.00 0.00 0.00 2.69
33 34 6.258160 CCTGTCGGAGTAAAAATAGCATTTG 58.742 40.000 0.00 0.00 0.00 2.32
34 35 5.163652 GCCTGTCGGAGTAAAAATAGCATTT 60.164 40.000 0.00 0.00 0.00 2.32
35 36 4.335594 GCCTGTCGGAGTAAAAATAGCATT 59.664 41.667 0.00 0.00 0.00 3.56
36 37 3.877508 GCCTGTCGGAGTAAAAATAGCAT 59.122 43.478 0.00 0.00 0.00 3.79
37 38 3.055385 AGCCTGTCGGAGTAAAAATAGCA 60.055 43.478 0.00 0.00 0.00 3.49
38 39 3.309954 CAGCCTGTCGGAGTAAAAATAGC 59.690 47.826 0.00 0.00 0.00 2.97
39 40 3.309954 GCAGCCTGTCGGAGTAAAAATAG 59.690 47.826 0.00 0.00 0.00 1.73
40 41 3.267483 GCAGCCTGTCGGAGTAAAAATA 58.733 45.455 0.00 0.00 0.00 1.40
41 42 2.084546 GCAGCCTGTCGGAGTAAAAAT 58.915 47.619 0.00 0.00 0.00 1.82
42 43 1.202710 TGCAGCCTGTCGGAGTAAAAA 60.203 47.619 0.00 0.00 0.00 1.94
43 44 0.394938 TGCAGCCTGTCGGAGTAAAA 59.605 50.000 0.00 0.00 0.00 1.52
44 45 0.613260 ATGCAGCCTGTCGGAGTAAA 59.387 50.000 0.00 0.00 0.00 2.01
45 46 1.136305 GTATGCAGCCTGTCGGAGTAA 59.864 52.381 0.00 0.00 0.00 2.24
46 47 0.744874 GTATGCAGCCTGTCGGAGTA 59.255 55.000 0.00 0.00 0.00 2.59
47 48 1.257750 TGTATGCAGCCTGTCGGAGT 61.258 55.000 0.00 0.00 0.00 3.85
48 49 0.108186 TTGTATGCAGCCTGTCGGAG 60.108 55.000 0.00 0.00 0.00 4.63
49 50 0.541392 ATTGTATGCAGCCTGTCGGA 59.459 50.000 0.00 0.00 0.00 4.55
50 51 1.382522 AATTGTATGCAGCCTGTCGG 58.617 50.000 0.00 0.00 0.00 4.79
51 52 4.332543 TCTTTAATTGTATGCAGCCTGTCG 59.667 41.667 0.00 0.00 0.00 4.35
52 53 5.818136 TCTTTAATTGTATGCAGCCTGTC 57.182 39.130 0.00 0.00 0.00 3.51
53 54 6.209391 ACTTTCTTTAATTGTATGCAGCCTGT 59.791 34.615 0.00 0.00 0.00 4.00
54 55 6.624423 ACTTTCTTTAATTGTATGCAGCCTG 58.376 36.000 0.00 0.00 0.00 4.85
55 56 6.840780 ACTTTCTTTAATTGTATGCAGCCT 57.159 33.333 0.00 0.00 0.00 4.58
56 57 7.985476 TCTACTTTCTTTAATTGTATGCAGCC 58.015 34.615 0.00 0.00 0.00 4.85
57 58 9.495754 CTTCTACTTTCTTTAATTGTATGCAGC 57.504 33.333 0.00 0.00 0.00 5.25
60 61 9.989869 GGTCTTCTACTTTCTTTAATTGTATGC 57.010 33.333 0.00 0.00 0.00 3.14
112 113 4.479619 ACAATTGGACGTAGAACGACTAC 58.520 43.478 10.83 12.05 46.05 2.73
113 114 4.456911 AGACAATTGGACGTAGAACGACTA 59.543 41.667 10.83 0.00 46.05 2.59
114 115 3.255149 AGACAATTGGACGTAGAACGACT 59.745 43.478 10.83 0.00 46.05 4.18
115 116 3.572584 AGACAATTGGACGTAGAACGAC 58.427 45.455 10.83 0.00 46.05 4.34
116 117 3.928727 AGACAATTGGACGTAGAACGA 57.071 42.857 10.83 0.00 46.05 3.85
118 119 4.024387 TGCAAAGACAATTGGACGTAGAAC 60.024 41.667 10.83 0.00 0.00 3.01
119 120 4.130857 TGCAAAGACAATTGGACGTAGAA 58.869 39.130 10.83 0.00 0.00 2.10
120 121 3.734463 TGCAAAGACAATTGGACGTAGA 58.266 40.909 10.83 0.00 0.00 2.59
121 122 4.685169 ATGCAAAGACAATTGGACGTAG 57.315 40.909 10.83 0.00 33.29 3.51
122 123 6.751514 ATAATGCAAAGACAATTGGACGTA 57.248 33.333 10.83 0.00 33.29 3.57
123 124 5.643379 ATAATGCAAAGACAATTGGACGT 57.357 34.783 10.83 0.00 33.29 4.34
124 125 8.533965 CAATTATAATGCAAAGACAATTGGACG 58.466 33.333 10.83 0.00 33.29 4.79
125 126 9.369904 ACAATTATAATGCAAAGACAATTGGAC 57.630 29.630 10.83 3.64 36.62 4.02
126 127 9.585099 GACAATTATAATGCAAAGACAATTGGA 57.415 29.630 10.83 0.00 36.62 3.53
127 128 9.590451 AGACAATTATAATGCAAAGACAATTGG 57.410 29.630 10.83 0.00 36.62 3.16
193 194 9.357652 GCATCTAGCATCACAAAAGAATAAAAA 57.642 29.630 0.00 0.00 44.79 1.94
194 195 8.915871 GCATCTAGCATCACAAAAGAATAAAA 57.084 30.769 0.00 0.00 44.79 1.52
211 212 1.517257 ACGCACGTGAGCATCTAGC 60.517 57.895 22.23 0.00 46.19 3.42
212 213 4.794164 ACGCACGTGAGCATCTAG 57.206 55.556 22.23 1.69 34.92 2.43
221 222 1.492873 CATGGACTTCACGCACGTG 59.507 57.895 16.73 16.73 46.64 4.49
222 223 2.317609 GCATGGACTTCACGCACGT 61.318 57.895 0.00 0.00 34.28 4.49
223 224 2.476051 GCATGGACTTCACGCACG 59.524 61.111 0.00 0.00 34.28 5.34
224 225 1.514678 TTGGCATGGACTTCACGCAC 61.515 55.000 0.00 0.00 36.10 5.34
225 226 0.821301 TTTGGCATGGACTTCACGCA 60.821 50.000 0.00 0.00 36.10 5.24
226 227 0.527565 ATTTGGCATGGACTTCACGC 59.472 50.000 0.00 0.00 33.19 5.34
227 228 3.244976 GAAATTTGGCATGGACTTCACG 58.755 45.455 0.00 0.00 0.00 4.35
228 229 4.255833 TGAAATTTGGCATGGACTTCAC 57.744 40.909 0.00 0.00 0.00 3.18
229 230 4.823157 CATGAAATTTGGCATGGACTTCA 58.177 39.130 10.58 0.00 38.52 3.02
236 237 4.430007 CAGACTCCATGAAATTTGGCATG 58.570 43.478 11.22 11.22 41.11 4.06
237 238 3.449737 CCAGACTCCATGAAATTTGGCAT 59.550 43.478 0.00 0.00 34.06 4.40
238 239 2.827322 CCAGACTCCATGAAATTTGGCA 59.173 45.455 0.00 0.00 34.06 4.92
239 240 3.091545 TCCAGACTCCATGAAATTTGGC 58.908 45.455 0.00 0.00 34.06 4.52
240 241 4.081406 TGTCCAGACTCCATGAAATTTGG 58.919 43.478 0.00 0.00 35.45 3.28
241 242 5.909621 ATGTCCAGACTCCATGAAATTTG 57.090 39.130 0.00 0.00 0.00 2.32
242 243 6.494491 TGAAATGTCCAGACTCCATGAAATTT 59.506 34.615 0.00 0.00 0.00 1.82
243 244 6.012113 TGAAATGTCCAGACTCCATGAAATT 58.988 36.000 0.00 0.00 0.00 1.82
244 245 5.573219 TGAAATGTCCAGACTCCATGAAAT 58.427 37.500 0.00 0.00 0.00 2.17
245 246 4.984295 TGAAATGTCCAGACTCCATGAAA 58.016 39.130 0.00 0.00 0.00 2.69
246 247 4.042062 ACTGAAATGTCCAGACTCCATGAA 59.958 41.667 0.00 0.00 35.69 2.57
247 248 3.584406 ACTGAAATGTCCAGACTCCATGA 59.416 43.478 0.00 0.00 35.69 3.07
248 249 3.947868 ACTGAAATGTCCAGACTCCATG 58.052 45.455 0.00 0.00 35.69 3.66
249 250 4.383552 GCTACTGAAATGTCCAGACTCCAT 60.384 45.833 0.00 0.00 35.69 3.41
250 251 3.055819 GCTACTGAAATGTCCAGACTCCA 60.056 47.826 0.00 0.00 35.69 3.86
251 252 3.196685 AGCTACTGAAATGTCCAGACTCC 59.803 47.826 0.00 0.00 35.69 3.85
252 253 4.159506 AGAGCTACTGAAATGTCCAGACTC 59.840 45.833 0.00 0.00 35.69 3.36
253 254 4.093011 AGAGCTACTGAAATGTCCAGACT 58.907 43.478 0.00 0.00 35.69 3.24
254 255 4.081972 TGAGAGCTACTGAAATGTCCAGAC 60.082 45.833 0.00 0.00 35.69 3.51
255 256 4.089361 TGAGAGCTACTGAAATGTCCAGA 58.911 43.478 0.00 0.00 35.69 3.86
256 257 4.431809 CTGAGAGCTACTGAAATGTCCAG 58.568 47.826 0.00 0.00 37.64 3.86
257 258 3.368843 GCTGAGAGCTACTGAAATGTCCA 60.369 47.826 0.00 0.00 38.45 4.02
258 259 3.194062 GCTGAGAGCTACTGAAATGTCC 58.806 50.000 0.00 0.00 38.45 4.02
259 260 3.854666 TGCTGAGAGCTACTGAAATGTC 58.145 45.455 0.00 0.00 42.97 3.06
260 261 3.969287 TGCTGAGAGCTACTGAAATGT 57.031 42.857 0.00 0.00 42.97 2.71
261 262 5.618056 TTTTGCTGAGAGCTACTGAAATG 57.382 39.130 0.00 0.00 42.97 2.32
262 263 5.334414 CGTTTTTGCTGAGAGCTACTGAAAT 60.334 40.000 0.00 0.00 42.97 2.17
263 264 4.024893 CGTTTTTGCTGAGAGCTACTGAAA 60.025 41.667 0.00 0.00 42.97 2.69
264 265 3.494626 CGTTTTTGCTGAGAGCTACTGAA 59.505 43.478 0.00 0.00 42.97 3.02
265 266 3.059884 CGTTTTTGCTGAGAGCTACTGA 58.940 45.455 0.00 0.00 42.97 3.41
266 267 3.059884 TCGTTTTTGCTGAGAGCTACTG 58.940 45.455 0.00 0.00 42.97 2.74
267 268 3.386768 TCGTTTTTGCTGAGAGCTACT 57.613 42.857 0.00 0.00 42.97 2.57
268 269 5.779806 TTATCGTTTTTGCTGAGAGCTAC 57.220 39.130 0.00 0.00 42.97 3.58
269 270 6.985188 ATTTATCGTTTTTGCTGAGAGCTA 57.015 33.333 0.00 0.00 42.97 3.32
270 271 5.886960 ATTTATCGTTTTTGCTGAGAGCT 57.113 34.783 0.00 0.00 42.97 4.09
271 272 6.934561 AAATTTATCGTTTTTGCTGAGAGC 57.065 33.333 0.00 0.00 42.82 4.09
272 273 7.594758 TCCAAAATTTATCGTTTTTGCTGAGAG 59.405 33.333 0.00 0.00 40.06 3.20
273 274 7.429633 TCCAAAATTTATCGTTTTTGCTGAGA 58.570 30.769 0.00 0.00 40.06 3.27
274 275 7.619982 GCTCCAAAATTTATCGTTTTTGCTGAG 60.620 37.037 0.00 6.41 40.06 3.35
275 276 6.145371 GCTCCAAAATTTATCGTTTTTGCTGA 59.855 34.615 0.00 0.00 40.06 4.26
276 277 6.146021 AGCTCCAAAATTTATCGTTTTTGCTG 59.854 34.615 0.00 0.64 40.06 4.41
277 278 6.146021 CAGCTCCAAAATTTATCGTTTTTGCT 59.854 34.615 0.00 0.00 40.06 3.91
278 279 6.073819 ACAGCTCCAAAATTTATCGTTTTTGC 60.074 34.615 0.00 0.00 40.06 3.68
279 280 7.406799 ACAGCTCCAAAATTTATCGTTTTTG 57.593 32.000 0.00 0.00 40.72 2.44
280 281 9.191995 CTTACAGCTCCAAAATTTATCGTTTTT 57.808 29.630 0.00 0.00 0.00 1.94
281 282 8.573035 TCTTACAGCTCCAAAATTTATCGTTTT 58.427 29.630 0.00 0.00 0.00 2.43
282 283 8.106247 TCTTACAGCTCCAAAATTTATCGTTT 57.894 30.769 0.00 0.00 0.00 3.60
283 284 7.681939 TCTTACAGCTCCAAAATTTATCGTT 57.318 32.000 0.00 0.00 0.00 3.85
284 285 7.681939 TTCTTACAGCTCCAAAATTTATCGT 57.318 32.000 0.00 0.00 0.00 3.73
285 286 8.237267 ACTTTCTTACAGCTCCAAAATTTATCG 58.763 33.333 0.00 0.00 0.00 2.92
286 287 9.346725 CACTTTCTTACAGCTCCAAAATTTATC 57.653 33.333 0.00 0.00 0.00 1.75
287 288 8.860088 ACACTTTCTTACAGCTCCAAAATTTAT 58.140 29.630 0.00 0.00 0.00 1.40
288 289 8.232913 ACACTTTCTTACAGCTCCAAAATTTA 57.767 30.769 0.00 0.00 0.00 1.40
289 290 7.112452 ACACTTTCTTACAGCTCCAAAATTT 57.888 32.000 0.00 0.00 0.00 1.82
290 291 6.715347 ACACTTTCTTACAGCTCCAAAATT 57.285 33.333 0.00 0.00 0.00 1.82
291 292 6.998673 AGTACACTTTCTTACAGCTCCAAAAT 59.001 34.615 0.00 0.00 0.00 1.82
292 293 6.260050 CAGTACACTTTCTTACAGCTCCAAAA 59.740 38.462 0.00 0.00 0.00 2.44
293 294 5.758296 CAGTACACTTTCTTACAGCTCCAAA 59.242 40.000 0.00 0.00 0.00 3.28
294 295 5.163343 ACAGTACACTTTCTTACAGCTCCAA 60.163 40.000 0.00 0.00 0.00 3.53
295 296 4.344102 ACAGTACACTTTCTTACAGCTCCA 59.656 41.667 0.00 0.00 0.00 3.86
296 297 4.884247 ACAGTACACTTTCTTACAGCTCC 58.116 43.478 0.00 0.00 0.00 4.70
297 298 5.983720 TGAACAGTACACTTTCTTACAGCTC 59.016 40.000 0.00 0.00 0.00 4.09
298 299 5.914033 TGAACAGTACACTTTCTTACAGCT 58.086 37.500 0.00 0.00 0.00 4.24
299 300 6.202954 ACATGAACAGTACACTTTCTTACAGC 59.797 38.462 0.00 0.00 0.00 4.40
300 301 7.715265 ACATGAACAGTACACTTTCTTACAG 57.285 36.000 0.00 0.00 0.00 2.74
301 302 8.418662 AGTACATGAACAGTACACTTTCTTACA 58.581 33.333 0.00 0.00 43.24 2.41
302 303 8.700644 CAGTACATGAACAGTACACTTTCTTAC 58.299 37.037 0.00 0.00 43.24 2.34
303 304 7.384115 GCAGTACATGAACAGTACACTTTCTTA 59.616 37.037 0.00 0.00 43.24 2.10
304 305 6.202954 GCAGTACATGAACAGTACACTTTCTT 59.797 38.462 0.00 0.00 43.24 2.52
305 306 5.696724 GCAGTACATGAACAGTACACTTTCT 59.303 40.000 0.00 0.00 43.24 2.52
306 307 5.696724 AGCAGTACATGAACAGTACACTTTC 59.303 40.000 0.00 0.00 43.24 2.62
307 308 5.611374 AGCAGTACATGAACAGTACACTTT 58.389 37.500 0.00 0.00 43.24 2.66
308 309 5.215252 AGCAGTACATGAACAGTACACTT 57.785 39.130 0.00 0.00 43.24 3.16
309 310 4.873746 AGCAGTACATGAACAGTACACT 57.126 40.909 0.00 0.99 43.24 3.55
310 311 4.090066 CGAAGCAGTACATGAACAGTACAC 59.910 45.833 0.00 0.00 43.24 2.90
311 312 4.022676 TCGAAGCAGTACATGAACAGTACA 60.023 41.667 0.00 0.00 43.24 2.90
312 313 4.323868 GTCGAAGCAGTACATGAACAGTAC 59.676 45.833 0.00 0.00 41.59 2.73
313 314 4.217767 AGTCGAAGCAGTACATGAACAGTA 59.782 41.667 0.00 0.00 0.00 2.74
314 315 3.005897 AGTCGAAGCAGTACATGAACAGT 59.994 43.478 0.00 0.00 0.00 3.55
315 316 3.366121 CAGTCGAAGCAGTACATGAACAG 59.634 47.826 0.00 0.00 0.00 3.16
316 317 3.005367 TCAGTCGAAGCAGTACATGAACA 59.995 43.478 0.00 0.00 0.00 3.18
317 318 3.575630 TCAGTCGAAGCAGTACATGAAC 58.424 45.455 0.00 0.00 0.00 3.18
318 319 3.934457 TCAGTCGAAGCAGTACATGAA 57.066 42.857 0.00 0.00 0.00 2.57
319 320 3.934457 TTCAGTCGAAGCAGTACATGA 57.066 42.857 0.00 0.00 0.00 3.07
320 321 5.536554 AAATTCAGTCGAAGCAGTACATG 57.463 39.130 0.00 0.00 33.74 3.21
321 322 6.428159 AGAAAAATTCAGTCGAAGCAGTACAT 59.572 34.615 0.00 0.00 33.74 2.29
322 323 5.758296 AGAAAAATTCAGTCGAAGCAGTACA 59.242 36.000 0.00 0.00 33.74 2.90
323 324 6.229561 AGAAAAATTCAGTCGAAGCAGTAC 57.770 37.500 0.00 0.00 33.74 2.73
324 325 6.861065 AAGAAAAATTCAGTCGAAGCAGTA 57.139 33.333 0.00 0.00 33.74 2.74
325 326 5.757850 AAGAAAAATTCAGTCGAAGCAGT 57.242 34.783 0.00 0.00 33.74 4.40
326 327 7.455331 AAAAAGAAAAATTCAGTCGAAGCAG 57.545 32.000 0.00 0.00 33.74 4.24
347 348 1.202639 TCTGAGGAGCTCACGCAAAAA 60.203 47.619 17.19 0.00 35.39 1.94
348 349 0.392706 TCTGAGGAGCTCACGCAAAA 59.607 50.000 17.19 2.00 35.39 2.44
349 350 0.610174 ATCTGAGGAGCTCACGCAAA 59.390 50.000 17.19 0.12 35.39 3.68
350 351 0.108472 CATCTGAGGAGCTCACGCAA 60.108 55.000 17.19 0.00 35.39 4.85
351 352 1.514553 CATCTGAGGAGCTCACGCA 59.485 57.895 17.19 11.71 35.39 5.24
352 353 1.882167 GCATCTGAGGAGCTCACGC 60.882 63.158 17.19 7.49 35.39 5.34
353 354 1.227205 GGCATCTGAGGAGCTCACG 60.227 63.158 17.19 5.97 35.39 4.35
354 355 1.145819 GGGCATCTGAGGAGCTCAC 59.854 63.158 17.19 9.56 35.39 3.51
355 356 0.911045 TTGGGCATCTGAGGAGCTCA 60.911 55.000 17.19 0.00 38.25 4.26
356 357 0.254178 TTTGGGCATCTGAGGAGCTC 59.746 55.000 4.71 4.71 0.00 4.09
357 358 0.034670 GTTTGGGCATCTGAGGAGCT 60.035 55.000 0.00 0.00 0.00 4.09
358 359 0.322816 TGTTTGGGCATCTGAGGAGC 60.323 55.000 0.00 0.00 0.00 4.70
359 360 2.205022 TTGTTTGGGCATCTGAGGAG 57.795 50.000 0.00 0.00 0.00 3.69
360 361 2.673775 TTTGTTTGGGCATCTGAGGA 57.326 45.000 0.00 0.00 0.00 3.71
361 362 3.258872 TCAATTTGTTTGGGCATCTGAGG 59.741 43.478 0.00 0.00 35.92 3.86
362 363 4.524316 TCAATTTGTTTGGGCATCTGAG 57.476 40.909 0.00 0.00 35.92 3.35
363 364 4.952071 TTCAATTTGTTTGGGCATCTGA 57.048 36.364 0.00 0.00 35.92 3.27
364 365 6.563222 AATTTCAATTTGTTTGGGCATCTG 57.437 33.333 0.00 0.00 35.92 2.90
365 366 6.972722 CAAATTTCAATTTGTTTGGGCATCT 58.027 32.000 14.43 0.00 46.27 2.90
377 378 6.149807 GTGATGTCCATGCCAAATTTCAATTT 59.850 34.615 0.00 0.00 39.07 1.82
378 379 5.644636 GTGATGTCCATGCCAAATTTCAATT 59.355 36.000 0.00 0.00 0.00 2.32
379 380 5.180271 GTGATGTCCATGCCAAATTTCAAT 58.820 37.500 0.00 0.00 0.00 2.57
380 381 4.567971 GTGATGTCCATGCCAAATTTCAA 58.432 39.130 0.00 0.00 0.00 2.69
381 382 3.367190 CGTGATGTCCATGCCAAATTTCA 60.367 43.478 0.00 0.00 0.00 2.69
382 383 3.181397 CGTGATGTCCATGCCAAATTTC 58.819 45.455 0.00 0.00 0.00 2.17
383 384 2.562298 ACGTGATGTCCATGCCAAATTT 59.438 40.909 0.00 0.00 35.17 1.82
384 385 2.170166 ACGTGATGTCCATGCCAAATT 58.830 42.857 0.00 0.00 35.17 1.82
385 386 1.838112 ACGTGATGTCCATGCCAAAT 58.162 45.000 0.00 0.00 35.17 2.32
386 387 2.481289 TACGTGATGTCCATGCCAAA 57.519 45.000 0.00 0.00 35.17 3.28
387 388 2.682352 CAATACGTGATGTCCATGCCAA 59.318 45.455 0.00 0.00 35.17 4.52
388 389 2.093235 TCAATACGTGATGTCCATGCCA 60.093 45.455 0.00 0.00 35.17 4.92
389 390 2.560504 TCAATACGTGATGTCCATGCC 58.439 47.619 0.00 0.00 35.17 4.40
390 391 4.142708 TGTTTCAATACGTGATGTCCATGC 60.143 41.667 0.00 0.00 35.70 4.06
391 392 5.544136 TGTTTCAATACGTGATGTCCATG 57.456 39.130 0.00 0.00 35.70 3.66
392 393 6.115446 AGATGTTTCAATACGTGATGTCCAT 58.885 36.000 0.00 1.80 35.70 3.41
393 394 5.487433 AGATGTTTCAATACGTGATGTCCA 58.513 37.500 0.00 0.00 35.70 4.02
394 395 6.422776 AAGATGTTTCAATACGTGATGTCC 57.577 37.500 0.00 0.00 35.70 4.02
395 396 6.092122 TGGAAGATGTTTCAATACGTGATGTC 59.908 38.462 0.00 0.00 35.70 3.06
396 397 5.937540 TGGAAGATGTTTCAATACGTGATGT 59.062 36.000 0.00 0.00 35.70 3.06
397 398 6.421377 TGGAAGATGTTTCAATACGTGATG 57.579 37.500 0.00 0.00 35.70 3.07
398 399 7.050377 AGATGGAAGATGTTTCAATACGTGAT 58.950 34.615 0.00 0.00 35.70 3.06
399 400 6.406370 AGATGGAAGATGTTTCAATACGTGA 58.594 36.000 0.00 0.00 0.00 4.35
400 401 6.668541 AGATGGAAGATGTTTCAATACGTG 57.331 37.500 0.00 0.00 0.00 4.49
401 402 8.258007 TCTTAGATGGAAGATGTTTCAATACGT 58.742 33.333 0.00 0.00 30.36 3.57
402 403 8.648557 TCTTAGATGGAAGATGTTTCAATACG 57.351 34.615 0.00 0.00 30.36 3.06
410 411 9.745018 TCTGAAATTTCTTAGATGGAAGATGTT 57.255 29.630 18.64 0.00 35.41 2.71
411 412 9.745018 TTCTGAAATTTCTTAGATGGAAGATGT 57.255 29.630 18.64 0.00 35.41 3.06
461 462 7.364970 GGGCGAAGAGTAAATAAACTCAAAAA 58.635 34.615 6.76 0.00 46.89 1.94
462 463 6.347888 CGGGCGAAGAGTAAATAAACTCAAAA 60.348 38.462 6.76 0.00 46.89 2.44
463 464 5.121142 CGGGCGAAGAGTAAATAAACTCAAA 59.879 40.000 6.76 0.00 46.89 2.69
464 465 4.628333 CGGGCGAAGAGTAAATAAACTCAA 59.372 41.667 6.76 0.00 46.89 3.02
465 466 4.178540 CGGGCGAAGAGTAAATAAACTCA 58.821 43.478 6.76 0.00 46.89 3.41
466 467 3.554731 CCGGGCGAAGAGTAAATAAACTC 59.445 47.826 0.00 0.00 45.20 3.01
467 468 3.055602 ACCGGGCGAAGAGTAAATAAACT 60.056 43.478 6.32 0.00 0.00 2.66
468 469 3.063045 CACCGGGCGAAGAGTAAATAAAC 59.937 47.826 6.32 0.00 0.00 2.01
469 470 3.264104 CACCGGGCGAAGAGTAAATAAA 58.736 45.455 6.32 0.00 0.00 1.40
470 471 2.896168 CACCGGGCGAAGAGTAAATAA 58.104 47.619 6.32 0.00 0.00 1.40
471 472 1.472026 GCACCGGGCGAAGAGTAAATA 60.472 52.381 6.32 0.00 0.00 1.40
472 473 0.743345 GCACCGGGCGAAGAGTAAAT 60.743 55.000 6.32 0.00 0.00 1.40
473 474 1.375013 GCACCGGGCGAAGAGTAAA 60.375 57.895 6.32 0.00 0.00 2.01
474 475 2.263540 GCACCGGGCGAAGAGTAA 59.736 61.111 6.32 0.00 0.00 2.24
484 485 3.790437 AGGCTCATCTGCACCGGG 61.790 66.667 6.32 0.00 34.04 5.73
485 486 2.513204 CAGGCTCATCTGCACCGG 60.513 66.667 0.00 0.00 34.04 5.28
486 487 2.513204 CCAGGCTCATCTGCACCG 60.513 66.667 0.00 0.00 33.64 4.94
487 488 2.124403 CCCAGGCTCATCTGCACC 60.124 66.667 0.00 0.00 33.64 5.01
488 489 2.827642 GCCCAGGCTCATCTGCAC 60.828 66.667 0.08 0.00 38.26 4.57
489 490 3.332385 TGCCCAGGCTCATCTGCA 61.332 61.111 10.58 0.00 42.51 4.41
490 491 2.827642 GTGCCCAGGCTCATCTGC 60.828 66.667 10.58 0.00 42.51 4.26
491 492 2.124403 GGTGCCCAGGCTCATCTG 60.124 66.667 10.58 0.00 42.51 2.90
492 493 3.790437 CGGTGCCCAGGCTCATCT 61.790 66.667 10.58 0.00 42.51 2.90
493 494 2.615227 ATTCGGTGCCCAGGCTCATC 62.615 60.000 10.58 0.00 42.51 2.92
494 495 2.215451 AATTCGGTGCCCAGGCTCAT 62.215 55.000 10.58 0.00 42.51 2.90
495 496 2.905996 AATTCGGTGCCCAGGCTCA 61.906 57.895 10.58 0.00 42.51 4.26
496 497 2.044946 AATTCGGTGCCCAGGCTC 60.045 61.111 10.58 6.18 42.51 4.70
497 498 2.361610 CAATTCGGTGCCCAGGCT 60.362 61.111 10.58 0.00 42.51 4.58
498 499 1.322538 ATTCAATTCGGTGCCCAGGC 61.323 55.000 0.38 0.38 42.35 4.85
499 500 2.051334 TATTCAATTCGGTGCCCAGG 57.949 50.000 0.00 0.00 0.00 4.45
500 501 2.554032 GGATATTCAATTCGGTGCCCAG 59.446 50.000 0.00 0.00 0.00 4.45
501 502 2.582052 GGATATTCAATTCGGTGCCCA 58.418 47.619 0.00 0.00 0.00 5.36
502 503 1.535462 CGGATATTCAATTCGGTGCCC 59.465 52.381 0.00 0.00 0.00 5.36
503 504 2.218603 ACGGATATTCAATTCGGTGCC 58.781 47.619 0.00 0.00 0.00 5.01
504 505 5.178623 TCAATACGGATATTCAATTCGGTGC 59.821 40.000 0.00 0.00 0.00 5.01
505 506 6.779115 TCAATACGGATATTCAATTCGGTG 57.221 37.500 0.00 0.00 0.00 4.94
506 507 6.073222 GCTTCAATACGGATATTCAATTCGGT 60.073 38.462 0.00 0.00 0.00 4.69
507 508 6.307155 GCTTCAATACGGATATTCAATTCGG 58.693 40.000 0.00 0.00 0.00 4.30
508 509 6.307155 GGCTTCAATACGGATATTCAATTCG 58.693 40.000 0.00 0.00 0.00 3.34
509 510 6.206634 TGGGCTTCAATACGGATATTCAATTC 59.793 38.462 0.00 0.00 0.00 2.17
510 511 6.068010 TGGGCTTCAATACGGATATTCAATT 58.932 36.000 0.00 0.00 0.00 2.32
511 512 5.630121 TGGGCTTCAATACGGATATTCAAT 58.370 37.500 0.00 0.00 0.00 2.57
512 513 5.042463 TGGGCTTCAATACGGATATTCAA 57.958 39.130 0.00 0.00 0.00 2.69
513 514 4.698201 TGGGCTTCAATACGGATATTCA 57.302 40.909 0.00 0.00 0.00 2.57
514 515 6.575162 AATTGGGCTTCAATACGGATATTC 57.425 37.500 6.32 0.00 44.68 1.75
515 516 6.976934 AAATTGGGCTTCAATACGGATATT 57.023 33.333 6.32 0.00 44.68 1.28
516 517 7.231467 AGTAAATTGGGCTTCAATACGGATAT 58.769 34.615 6.32 0.00 44.68 1.63
517 518 6.597562 AGTAAATTGGGCTTCAATACGGATA 58.402 36.000 6.32 0.00 44.68 2.59
518 519 5.445964 AGTAAATTGGGCTTCAATACGGAT 58.554 37.500 6.32 0.00 44.68 4.18
519 520 4.850680 AGTAAATTGGGCTTCAATACGGA 58.149 39.130 6.32 0.00 44.68 4.69
520 521 4.881850 AGAGTAAATTGGGCTTCAATACGG 59.118 41.667 6.32 0.00 44.68 4.02
521 522 6.436843 AAGAGTAAATTGGGCTTCAATACG 57.563 37.500 6.32 0.00 44.68 3.06
522 523 6.183360 GGGAAGAGTAAATTGGGCTTCAATAC 60.183 42.308 0.00 3.38 44.68 1.89
523 524 5.891551 GGGAAGAGTAAATTGGGCTTCAATA 59.108 40.000 0.00 0.00 44.68 1.90
525 526 4.086457 GGGAAGAGTAAATTGGGCTTCAA 58.914 43.478 0.00 0.00 37.33 2.69
526 527 3.563479 GGGGAAGAGTAAATTGGGCTTCA 60.563 47.826 0.00 0.00 37.33 3.02
527 528 3.024547 GGGGAAGAGTAAATTGGGCTTC 58.975 50.000 0.00 0.00 35.44 3.86
528 529 2.620627 CGGGGAAGAGTAAATTGGGCTT 60.621 50.000 0.00 0.00 0.00 4.35
529 530 1.064685 CGGGGAAGAGTAAATTGGGCT 60.065 52.381 0.00 0.00 0.00 5.19
530 531 1.389555 CGGGGAAGAGTAAATTGGGC 58.610 55.000 0.00 0.00 0.00 5.36
531 532 1.064685 AGCGGGGAAGAGTAAATTGGG 60.065 52.381 0.00 0.00 0.00 4.12
532 533 2.420058 AGCGGGGAAGAGTAAATTGG 57.580 50.000 0.00 0.00 0.00 3.16
533 534 5.890424 TTTTAGCGGGGAAGAGTAAATTG 57.110 39.130 0.00 0.00 0.00 2.32
555 556 0.261696 ACTGGGTCACTGGGCTTTTT 59.738 50.000 0.00 0.00 0.00 1.94
556 557 0.178990 GACTGGGTCACTGGGCTTTT 60.179 55.000 0.00 0.00 32.09 2.27
557 558 1.062488 AGACTGGGTCACTGGGCTTT 61.062 55.000 0.52 0.00 34.60 3.51
558 559 0.178903 TAGACTGGGTCACTGGGCTT 60.179 55.000 0.52 0.00 34.60 4.35
559 560 0.905337 GTAGACTGGGTCACTGGGCT 60.905 60.000 0.52 0.00 34.60 5.19
560 561 0.905337 AGTAGACTGGGTCACTGGGC 60.905 60.000 0.52 0.00 34.60 5.36
561 562 1.187087 GAGTAGACTGGGTCACTGGG 58.813 60.000 0.52 0.00 34.60 4.45
562 563 2.223803 AGAGTAGACTGGGTCACTGG 57.776 55.000 0.52 0.00 34.60 4.00
563 564 6.539173 AGATATAGAGTAGACTGGGTCACTG 58.461 44.000 0.52 0.00 34.60 3.66
564 565 6.773583 AGATATAGAGTAGACTGGGTCACT 57.226 41.667 0.52 2.39 34.60 3.41
582 583 9.593565 TCGGATTATGAGCCTGAATATAGATAT 57.406 33.333 0.00 0.00 0.00 1.63
583 584 8.996651 TCGGATTATGAGCCTGAATATAGATA 57.003 34.615 0.00 0.00 0.00 1.98
584 585 7.904558 TCGGATTATGAGCCTGAATATAGAT 57.095 36.000 0.00 0.00 0.00 1.98
585 586 7.363880 GGTTCGGATTATGAGCCTGAATATAGA 60.364 40.741 3.30 0.00 34.25 1.98
586 587 6.758886 GGTTCGGATTATGAGCCTGAATATAG 59.241 42.308 3.30 0.00 34.25 1.31
587 588 6.212589 TGGTTCGGATTATGAGCCTGAATATA 59.787 38.462 3.30 0.00 37.58 0.86
588 589 5.013079 TGGTTCGGATTATGAGCCTGAATAT 59.987 40.000 3.30 0.00 37.58 1.28
589 590 4.346709 TGGTTCGGATTATGAGCCTGAATA 59.653 41.667 3.30 0.00 37.58 1.75
590 591 3.136443 TGGTTCGGATTATGAGCCTGAAT 59.864 43.478 3.30 0.00 37.58 2.57
591 592 2.503765 TGGTTCGGATTATGAGCCTGAA 59.496 45.455 0.00 0.00 37.58 3.02
592 593 2.115427 TGGTTCGGATTATGAGCCTGA 58.885 47.619 0.00 0.00 37.58 3.86
593 594 2.614057 GTTGGTTCGGATTATGAGCCTG 59.386 50.000 0.00 0.00 37.58 4.85
594 595 2.421529 GGTTGGTTCGGATTATGAGCCT 60.422 50.000 0.00 0.00 37.58 4.58
595 596 1.947456 GGTTGGTTCGGATTATGAGCC 59.053 52.381 0.00 0.00 37.25 4.70
596 597 1.947456 GGGTTGGTTCGGATTATGAGC 59.053 52.381 0.00 0.00 0.00 4.26
597 598 3.206150 CTGGGTTGGTTCGGATTATGAG 58.794 50.000 0.00 0.00 0.00 2.90
598 599 2.574369 ACTGGGTTGGTTCGGATTATGA 59.426 45.455 0.00 0.00 0.00 2.15
599 600 2.999331 ACTGGGTTGGTTCGGATTATG 58.001 47.619 0.00 0.00 0.00 1.90
600 601 3.732048 AACTGGGTTGGTTCGGATTAT 57.268 42.857 0.00 0.00 0.00 1.28
601 602 3.512219 AAACTGGGTTGGTTCGGATTA 57.488 42.857 0.00 0.00 0.00 1.75
602 603 2.375014 AAACTGGGTTGGTTCGGATT 57.625 45.000 0.00 0.00 0.00 3.01
603 604 2.553685 GGTAAACTGGGTTGGTTCGGAT 60.554 50.000 0.00 0.00 0.00 4.18
604 605 1.202794 GGTAAACTGGGTTGGTTCGGA 60.203 52.381 0.00 0.00 0.00 4.55
605 606 1.202842 AGGTAAACTGGGTTGGTTCGG 60.203 52.381 0.00 0.00 0.00 4.30
606 607 2.265589 AGGTAAACTGGGTTGGTTCG 57.734 50.000 0.00 0.00 0.00 3.95
607 608 4.722220 AGTAAGGTAAACTGGGTTGGTTC 58.278 43.478 0.00 0.00 0.00 3.62
608 609 4.801521 AGTAAGGTAAACTGGGTTGGTT 57.198 40.909 0.00 0.00 0.00 3.67
609 610 4.909695 ACTAGTAAGGTAAACTGGGTTGGT 59.090 41.667 0.00 0.00 30.31 3.67
610 611 5.494390 ACTAGTAAGGTAAACTGGGTTGG 57.506 43.478 0.00 0.00 30.31 3.77
611 612 9.159364 GAAATACTAGTAAGGTAAACTGGGTTG 57.841 37.037 6.70 0.00 30.31 3.77
612 613 9.109246 AGAAATACTAGTAAGGTAAACTGGGTT 57.891 33.333 6.70 0.00 30.31 4.11
613 614 8.676397 AGAAATACTAGTAAGGTAAACTGGGT 57.324 34.615 6.70 0.00 30.31 4.51
614 615 8.755977 TGAGAAATACTAGTAAGGTAAACTGGG 58.244 37.037 6.70 0.00 30.31 4.45
647 648 6.127101 AGGAGCAGTAAGGTAAACTGTTTTT 58.873 36.000 11.48 2.69 45.01 1.94
648 649 5.691896 AGGAGCAGTAAGGTAAACTGTTTT 58.308 37.500 11.48 0.00 45.01 2.43
649 650 5.306114 AGGAGCAGTAAGGTAAACTGTTT 57.694 39.130 10.98 10.98 45.01 2.83
650 651 4.560919 CGAGGAGCAGTAAGGTAAACTGTT 60.561 45.833 5.25 0.00 45.01 3.16
651 652 3.056749 CGAGGAGCAGTAAGGTAAACTGT 60.057 47.826 5.25 0.00 45.01 3.55
652 653 3.192844 TCGAGGAGCAGTAAGGTAAACTG 59.807 47.826 0.00 0.00 45.80 3.16
653 654 3.428532 TCGAGGAGCAGTAAGGTAAACT 58.571 45.455 0.00 0.00 0.00 2.66
654 655 3.863142 TCGAGGAGCAGTAAGGTAAAC 57.137 47.619 0.00 0.00 0.00 2.01
655 656 3.383825 GGATCGAGGAGCAGTAAGGTAAA 59.616 47.826 0.00 0.00 0.00 2.01
656 657 2.957006 GGATCGAGGAGCAGTAAGGTAA 59.043 50.000 0.00 0.00 0.00 2.85
657 658 2.584236 GGATCGAGGAGCAGTAAGGTA 58.416 52.381 0.00 0.00 0.00 3.08
658 659 1.404843 GGATCGAGGAGCAGTAAGGT 58.595 55.000 0.00 0.00 0.00 3.50
659 660 0.676736 GGGATCGAGGAGCAGTAAGG 59.323 60.000 0.00 0.00 0.00 2.69
660 661 1.611491 GAGGGATCGAGGAGCAGTAAG 59.389 57.143 0.00 0.00 0.00 2.34
661 662 1.063942 TGAGGGATCGAGGAGCAGTAA 60.064 52.381 0.00 0.00 0.00 2.24
662 663 0.551396 TGAGGGATCGAGGAGCAGTA 59.449 55.000 0.00 0.00 0.00 2.74
663 664 0.105760 ATGAGGGATCGAGGAGCAGT 60.106 55.000 0.00 0.00 0.00 4.40
664 665 0.602562 GATGAGGGATCGAGGAGCAG 59.397 60.000 0.00 0.00 0.00 4.24
665 666 0.829602 GGATGAGGGATCGAGGAGCA 60.830 60.000 0.00 0.00 30.87 4.26
666 667 1.540435 GGGATGAGGGATCGAGGAGC 61.540 65.000 0.00 0.00 30.87 4.70
667 668 0.902516 GGGGATGAGGGATCGAGGAG 60.903 65.000 0.00 0.00 30.87 3.69
668 669 1.156330 GGGGATGAGGGATCGAGGA 59.844 63.158 0.00 0.00 30.87 3.71
669 670 2.279069 CGGGGATGAGGGATCGAGG 61.279 68.421 0.00 0.00 30.87 4.63
670 671 1.228583 TCGGGGATGAGGGATCGAG 60.229 63.158 0.00 0.00 30.87 4.04
671 672 1.228583 CTCGGGGATGAGGGATCGA 60.229 63.158 0.00 0.00 32.18 3.59
672 673 0.613292 ATCTCGGGGATGAGGGATCG 60.613 60.000 0.00 0.00 36.61 3.69
673 674 2.534042 TATCTCGGGGATGAGGGATC 57.466 55.000 0.00 0.00 36.61 3.36
674 675 3.498614 ATTATCTCGGGGATGAGGGAT 57.501 47.619 0.00 0.00 36.61 3.85
675 676 3.275848 AATTATCTCGGGGATGAGGGA 57.724 47.619 0.00 0.00 36.61 4.20
676 677 3.838317 TGTAATTATCTCGGGGATGAGGG 59.162 47.826 0.00 0.00 36.61 4.30
677 678 4.618460 CGTGTAATTATCTCGGGGATGAGG 60.618 50.000 0.00 0.00 36.61 3.86
678 679 4.217767 TCGTGTAATTATCTCGGGGATGAG 59.782 45.833 0.00 0.00 35.98 2.90
679 680 4.146564 TCGTGTAATTATCTCGGGGATGA 58.853 43.478 0.00 0.00 35.98 2.92
680 681 4.514781 TCGTGTAATTATCTCGGGGATG 57.485 45.455 0.00 0.00 35.98 3.51
681 682 5.950549 ACTATCGTGTAATTATCTCGGGGAT 59.049 40.000 0.00 0.00 38.38 3.85
682 683 5.319453 ACTATCGTGTAATTATCTCGGGGA 58.681 41.667 0.00 0.00 0.00 4.81
683 684 5.640189 ACTATCGTGTAATTATCTCGGGG 57.360 43.478 0.00 0.00 0.00 5.73
684 685 6.149973 TGGTACTATCGTGTAATTATCTCGGG 59.850 42.308 0.00 0.00 0.00 5.14
685 686 7.020010 GTGGTACTATCGTGTAATTATCTCGG 58.980 42.308 0.00 0.00 0.00 4.63
741 742 9.074443 GTACTGACACGTAAAAATTTCCAAAAA 57.926 29.630 0.00 0.00 0.00 1.94
817 818 2.738643 CGGTCAGTTCCAGCGTCAATAT 60.739 50.000 0.00 0.00 0.00 1.28
882 883 4.685026 CGTATCGAGCGAGCGGGG 62.685 72.222 6.34 0.00 0.00 5.73
1252 1284 1.191489 TCCCGTGCTTCTCACATGGA 61.191 55.000 3.58 0.00 45.46 3.41
1451 1483 4.240096 GCTGTTGCAAAAGTGAATATGCT 58.760 39.130 17.92 0.00 39.49 3.79
1797 2094 7.039882 GTGCACTAAGCTACATTAGTTCCTAA 58.960 38.462 10.32 0.00 42.05 2.69
2121 2418 3.871463 GCAGATGTCTGAAATCCACCACT 60.871 47.826 13.94 0.00 46.59 4.00
2184 2481 1.561076 TGTGCCTTCATATCAGCCACT 59.439 47.619 0.00 0.00 0.00 4.00
2643 2941 6.419413 GCCATAGTTCATCTTAGAGAAGTTCG 59.581 42.308 0.00 0.00 34.03 3.95
2787 3086 9.496873 AGCAAACATAACACACAATAGTTACTA 57.503 29.630 0.00 0.00 33.49 1.82
2854 3153 8.860088 TCTAGCAAGCATAACACAGAATATCTA 58.140 33.333 0.00 0.00 0.00 1.98
2998 3346 3.429141 GTGCCTCGGAGTCGACGA 61.429 66.667 10.46 2.92 40.88 4.20


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.