Multiple sequence alignment - TraesCS5D01G045700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G045700 chr5D 100.000 7015 0 0 1 7015 44907071 44914085 0.000000e+00 12955.0
1 TraesCS5D01G045700 chr5A 95.050 5353 143 53 3 5311 35626715 35631989 0.000000e+00 8305.0
2 TraesCS5D01G045700 chr5A 91.725 1438 63 27 5242 6637 35631893 35633316 0.000000e+00 1945.0
3 TraesCS5D01G045700 chr5B 94.838 5347 211 35 1 5311 44776235 44781552 0.000000e+00 8285.0
4 TraesCS5D01G045700 chr5B 93.213 1326 45 18 5293 6582 44781503 44782819 0.000000e+00 1908.0
5 TraesCS5D01G045700 chr7D 80.905 199 38 0 5521 5719 568949969 568949771 2.620000e-34 158.0
6 TraesCS5D01G045700 chr7A 79.899 199 40 0 5521 5719 657716928 657716730 5.670000e-31 147.0
7 TraesCS5D01G045700 chr7B 79.397 199 41 0 5521 5719 625297133 625296935 2.640000e-29 141.0
8 TraesCS5D01G045700 chr2D 85.556 90 13 0 5629 5718 624367336 624367425 2.080000e-15 95.3
9 TraesCS5D01G045700 chr2B 85.556 90 13 0 5629 5718 766566860 766566949 2.080000e-15 95.3
10 TraesCS5D01G045700 chr2A 85.556 90 13 0 5629 5718 755774296 755774385 2.080000e-15 95.3
11 TraesCS5D01G045700 chr1B 81.690 71 10 3 6691 6759 184773250 184773181 1.000000e-03 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G045700 chr5D 44907071 44914085 7014 False 12955.0 12955 100.0000 1 7015 1 chr5D.!!$F1 7014
1 TraesCS5D01G045700 chr5A 35626715 35633316 6601 False 5125.0 8305 93.3875 3 6637 2 chr5A.!!$F1 6634
2 TraesCS5D01G045700 chr5B 44776235 44782819 6584 False 5096.5 8285 94.0255 1 6582 2 chr5B.!!$F1 6581

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
654 694 0.107654 CTGTTCACCGGGGAGGATTC 60.108 60.0 6.46 0.00 45.00 2.52 F
1073 1118 1.318158 GGTACATCTCGTCCCACGGT 61.318 60.0 0.00 0.00 42.81 4.83 F
1931 1986 0.625849 TCCAAATCTTCCCCCTCAGC 59.374 55.0 0.00 0.00 0.00 4.26 F
2092 2147 1.340088 ATGCCCAAATGACACTGCAA 58.660 45.0 0.00 0.00 31.81 4.08 F
3816 3881 0.817634 CCGCTGGTGAGAAACAACCA 60.818 55.0 0.00 0.00 34.92 3.67 F
3926 3991 0.179009 GGGCTGCCTTCTATGCATGA 60.179 55.0 19.68 1.87 38.22 3.07 F
4468 4533 0.250901 GCATAATCCTCCGGCACCAT 60.251 55.0 0.00 0.00 0.00 3.55 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1524 1574 2.158813 TGGAAAATAGATGACCCGGCTC 60.159 50.000 0.00 0.0 0.00 4.70 R
2121 2176 3.054802 AGAATCCAGGCTACAAGAACAGG 60.055 47.826 0.00 0.0 0.00 4.00 R
3774 3839 0.974383 ACTCGTCCCAACCAACCTAG 59.026 55.000 0.00 0.0 0.00 3.02 R
3926 3991 3.719268 TCAGCCTACCATTGAACATGT 57.281 42.857 0.00 0.0 0.00 3.21 R
4872 4937 0.383949 GGACGCTGGATGAGTCTCTC 59.616 60.000 0.65 0.0 43.56 3.20 R
4887 4952 0.676466 TTGCACCATAAGCCTGGACG 60.676 55.000 0.00 0.0 39.73 4.79 R
6063 6140 0.171679 ACGTCGCAATACCGTGATGA 59.828 50.000 0.00 0.0 36.21 2.92 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 5.114780 CCCAATCAACATTTTTGTGTGTGA 58.885 37.500 0.00 0.00 31.49 3.58
33 34 5.759273 CCCAATCAACATTTTTGTGTGTGAT 59.241 36.000 0.00 0.00 34.43 3.06
34 35 6.292973 CCCAATCAACATTTTTGTGTGTGATG 60.293 38.462 0.00 0.00 33.87 3.07
39 40 6.974048 TCAACATTTTTGTGTGTGATGAGAAG 59.026 34.615 0.00 0.00 31.49 2.85
40 41 6.698008 ACATTTTTGTGTGTGATGAGAAGA 57.302 33.333 0.00 0.00 0.00 2.87
41 42 7.099266 ACATTTTTGTGTGTGATGAGAAGAA 57.901 32.000 0.00 0.00 0.00 2.52
45 46 7.810766 TTTTGTGTGTGATGAGAAGAAAAAC 57.189 32.000 0.00 0.00 0.00 2.43
46 47 5.499139 TGTGTGTGATGAGAAGAAAAACC 57.501 39.130 0.00 0.00 0.00 3.27
56 57 7.439056 TGATGAGAAGAAAAACCAGCAAAAATC 59.561 33.333 0.00 0.00 0.00 2.17
182 185 3.699894 CCTCCTCCGCTGCACACT 61.700 66.667 0.00 0.00 0.00 3.55
183 186 2.125753 CTCCTCCGCTGCACACTC 60.126 66.667 0.00 0.00 0.00 3.51
184 187 2.917227 TCCTCCGCTGCACACTCA 60.917 61.111 0.00 0.00 0.00 3.41
185 188 2.740055 CCTCCGCTGCACACTCAC 60.740 66.667 0.00 0.00 0.00 3.51
532 562 1.153745 CCGCGCTACTTCTGCTTCT 60.154 57.895 5.56 0.00 0.00 2.85
533 563 1.416813 CCGCGCTACTTCTGCTTCTG 61.417 60.000 5.56 0.00 0.00 3.02
654 694 0.107654 CTGTTCACCGGGGAGGATTC 60.108 60.000 6.46 0.00 45.00 2.52
669 709 3.151958 ATTCGGATCGGTGAGCGGG 62.152 63.158 3.57 0.00 0.00 6.13
764 804 4.660938 GCGAGGGTTTGCCTGGGT 62.661 66.667 0.00 0.00 34.45 4.51
979 1024 1.737008 GGCGGAGTTCGGTGTTCTC 60.737 63.158 0.00 0.00 39.69 2.87
1073 1118 1.318158 GGTACATCTCGTCCCACGGT 61.318 60.000 0.00 0.00 42.81 4.83
1112 1157 5.239525 AGCTGTTCAATTCTCAACTTGTACC 59.760 40.000 0.00 0.00 0.00 3.34
1127 1172 3.093057 TGTACCTCTGTCTGCATCTCT 57.907 47.619 0.00 0.00 0.00 3.10
1158 1203 2.424601 CGGATTGTGGAATGTGCTGATT 59.575 45.455 0.00 0.00 0.00 2.57
1597 1650 8.024865 GGTTTTATCAGTTTGTACCACCAATAC 58.975 37.037 0.00 0.00 0.00 1.89
1599 1652 8.871629 TTTATCAGTTTGTACCACCAATACAT 57.128 30.769 0.00 0.00 32.70 2.29
1600 1653 9.961264 TTTATCAGTTTGTACCACCAATACATA 57.039 29.630 0.00 0.00 32.70 2.29
1931 1986 0.625849 TCCAAATCTTCCCCCTCAGC 59.374 55.000 0.00 0.00 0.00 4.26
1979 2034 5.106712 ACCATGCATGTAAGTTTACACTTCG 60.107 40.000 24.58 6.44 45.47 3.79
2040 2095 3.568853 CCCTGAGATCATTTCTTGATGCC 59.431 47.826 0.00 0.00 45.29 4.40
2092 2147 1.340088 ATGCCCAAATGACACTGCAA 58.660 45.000 0.00 0.00 31.81 4.08
2121 2176 4.142038 AGCCCGGTATTAATCACATTTCC 58.858 43.478 0.00 0.00 0.00 3.13
2226 2281 3.576078 TGACAGGAAGAGCAAAAGGAA 57.424 42.857 0.00 0.00 0.00 3.36
2440 2496 8.532977 AACTGGTCATATTTTGTGCATTTTAC 57.467 30.769 0.00 0.00 0.00 2.01
2445 2501 8.934825 GGTCATATTTTGTGCATTTTACATTGT 58.065 29.630 0.00 0.00 0.00 2.71
2605 2661 5.052481 GTCTCAGATTATGTGCAGCATGTA 58.948 41.667 0.00 0.00 39.31 2.29
2811 2870 5.451381 GGGAATTTCTCTGGAAAACGTTGTT 60.451 40.000 0.00 0.00 43.51 2.83
2822 2883 7.876068 TCTGGAAAACGTTGTTATGATAACTCT 59.124 33.333 15.57 0.00 0.00 3.24
2904 2966 6.013293 GGATATATTGGACTCTTAGTTGGCCT 60.013 42.308 3.32 0.00 0.00 5.19
3043 3106 8.523915 TTCATCTGGTACCGACTACTTTATTA 57.476 34.615 7.57 0.00 0.00 0.98
3528 3593 5.588246 TGAGTAACAGCATGAAAACTGTGAA 59.412 36.000 0.00 0.00 46.17 3.18
3671 3736 6.428159 CAGAGTACCTGCTGTTATCTTGTTTT 59.572 38.462 0.00 0.00 35.89 2.43
3704 3769 3.263170 TCAACCTATTAGCTCTGTTGCCA 59.737 43.478 0.00 0.00 36.97 4.92
3774 3839 9.213799 TGGTAATGGCTGAAATTTTATTTGTTC 57.786 29.630 0.00 0.00 0.00 3.18
3816 3881 0.817634 CCGCTGGTGAGAAACAACCA 60.818 55.000 0.00 0.00 34.92 3.67
3858 3923 2.238521 GAGCCATTGACAACCTTTCCA 58.761 47.619 0.00 0.00 0.00 3.53
3926 3991 0.179009 GGGCTGCCTTCTATGCATGA 60.179 55.000 19.68 1.87 38.22 3.07
4021 4086 9.150348 CAACCAAGTGTTCTTTTAATCAAGTTT 57.850 29.630 0.00 0.00 34.00 2.66
4063 4128 6.161381 GCAGGTGTCAAGAATGATGATTTTT 58.839 36.000 0.00 0.00 38.01 1.94
4468 4533 0.250901 GCATAATCCTCCGGCACCAT 60.251 55.000 0.00 0.00 0.00 3.55
4575 4640 0.543749 ACTCTAGCATGCCTGGTTCC 59.456 55.000 15.66 0.00 34.31 3.62
4872 4937 4.641645 TTGGCCCCACAGTCAGCG 62.642 66.667 0.00 0.00 0.00 5.18
4887 4952 0.248990 CAGCGAGAGACTCATCCAGC 60.249 60.000 5.02 2.74 0.00 4.85
5219 5284 7.120873 ACATTCTTCAAAGTGGATCTGATGAAG 59.879 37.037 15.04 15.04 43.99 3.02
5227 5292 5.276440 AGTGGATCTGATGAAGTAAGAGGT 58.724 41.667 0.00 0.00 0.00 3.85
5231 5296 7.655328 GTGGATCTGATGAAGTAAGAGGTAATG 59.345 40.741 0.00 0.00 0.00 1.90
5288 5353 8.487028 AGAGGTAAAGAGTTCATATTAGGTTGG 58.513 37.037 0.00 0.00 0.00 3.77
5293 5358 8.738645 AAAGAGTTCATATTAGGTTGGCTTAG 57.261 34.615 0.00 0.00 0.00 2.18
5294 5359 7.676683 AGAGTTCATATTAGGTTGGCTTAGA 57.323 36.000 0.00 0.00 0.00 2.10
5295 5360 7.731054 AGAGTTCATATTAGGTTGGCTTAGAG 58.269 38.462 0.00 0.00 0.00 2.43
5296 5361 6.831976 AGTTCATATTAGGTTGGCTTAGAGG 58.168 40.000 0.00 0.00 0.00 3.69
5297 5362 5.228945 TCATATTAGGTTGGCTTAGAGGC 57.771 43.478 0.00 0.00 41.77 4.70
5311 5376 5.825151 GGCTTAGAGGCAAAGAGTTCATATT 59.175 40.000 0.00 0.00 40.97 1.28
5316 5381 6.963322 AGAGGCAAAGAGTTCATATTAGGTT 58.037 36.000 0.00 0.00 0.00 3.50
5516 5586 8.470002 AGGCTGAATACTTTTGATATTGGTTTC 58.530 33.333 0.00 0.00 0.00 2.78
5740 5810 3.835978 TGACCTAGAAAAACCATCTCCGA 59.164 43.478 0.00 0.00 0.00 4.55
5744 5814 4.035675 CCTAGAAAAACCATCTCCGATTGC 59.964 45.833 0.00 0.00 0.00 3.56
5762 5832 6.088483 CCGATTGCATGCACATACAATAAATC 59.912 38.462 22.58 14.97 35.53 2.17
5780 5850 1.298713 CCGATCTCCTCTTCGTGCG 60.299 63.158 0.00 0.00 33.60 5.34
5787 5857 1.920574 CTCCTCTTCGTGCGTAACATG 59.079 52.381 0.00 0.00 36.55 3.21
6023 6093 3.193691 CACTGGACTACTGAAACGGAGAT 59.806 47.826 0.00 0.00 0.00 2.75
6048 6123 2.706190 AGTCCAGAACTAAACCAGCACT 59.294 45.455 0.00 0.00 36.07 4.40
6055 6132 2.269940 ACTAAACCAGCACTCCAGGAT 58.730 47.619 0.00 0.00 0.00 3.24
6060 6137 1.145598 CAGCACTCCAGGATCGCAT 59.854 57.895 11.82 0.00 0.00 4.73
6061 6138 0.879400 CAGCACTCCAGGATCGCATC 60.879 60.000 11.82 0.00 0.00 3.91
6062 6139 1.144716 GCACTCCAGGATCGCATCA 59.855 57.895 5.52 0.00 0.00 3.07
6063 6140 0.250209 GCACTCCAGGATCGCATCAT 60.250 55.000 5.52 0.00 0.00 2.45
6075 6152 3.385193 TCGCATCATCATCACGGTATT 57.615 42.857 0.00 0.00 0.00 1.89
6184 6267 5.702209 TCATTCCGATCATGGATATGTTGTG 59.298 40.000 0.00 0.00 38.00 3.33
6302 6387 8.655901 TGACCACCTTATTATGTAGCAATATGA 58.344 33.333 0.00 0.00 0.00 2.15
6374 6459 1.205893 CTGGAGCCTAGACTTTTCGCT 59.794 52.381 0.00 0.00 0.00 4.93
6380 6465 3.003480 GCCTAGACTTTTCGCTGTGAAT 58.997 45.455 4.26 0.00 36.22 2.57
6471 6574 3.505680 GTGGTTGTTTGATATGCTGGACA 59.494 43.478 0.00 0.00 0.00 4.02
6507 6619 0.322098 CGTGCCAAAGTGGGGATACA 60.322 55.000 0.00 0.00 38.19 2.29
6538 6652 1.524849 GGCCATTCGCTTCCCTCTC 60.525 63.158 0.00 0.00 37.74 3.20
6539 6653 1.524482 GCCATTCGCTTCCCTCTCT 59.476 57.895 0.00 0.00 0.00 3.10
6540 6654 0.813210 GCCATTCGCTTCCCTCTCTG 60.813 60.000 0.00 0.00 0.00 3.35
6541 6655 0.539051 CCATTCGCTTCCCTCTCTGT 59.461 55.000 0.00 0.00 0.00 3.41
6598 6714 6.601741 AACCGTCGAACATAGTGTTAAAAA 57.398 33.333 0.00 0.00 41.28 1.94
6599 6715 6.219302 ACCGTCGAACATAGTGTTAAAAAG 57.781 37.500 0.00 0.00 41.28 2.27
6600 6716 5.754890 ACCGTCGAACATAGTGTTAAAAAGT 59.245 36.000 0.00 0.00 41.28 2.66
6602 6718 7.127686 CCGTCGAACATAGTGTTAAAAAGTTT 58.872 34.615 0.00 0.00 41.28 2.66
6605 6721 8.730427 GTCGAACATAGTGTTAAAAAGTTTGTG 58.270 33.333 0.00 0.00 41.28 3.33
6607 6723 7.911205 CGAACATAGTGTTAAAAAGTTTGTGGA 59.089 33.333 0.00 0.00 41.28 4.02
6615 6731 7.977293 GTGTTAAAAAGTTTGTGGATAGTTGGT 59.023 33.333 0.00 0.00 0.00 3.67
6616 6732 9.186837 TGTTAAAAAGTTTGTGGATAGTTGGTA 57.813 29.630 0.00 0.00 0.00 3.25
6637 6754 7.331026 TGGTAATCTGAGGTGTTTCTCTTATG 58.669 38.462 0.00 0.00 34.98 1.90
6638 6755 7.038302 TGGTAATCTGAGGTGTTTCTCTTATGT 60.038 37.037 0.00 0.00 34.98 2.29
6639 6756 7.824779 GGTAATCTGAGGTGTTTCTCTTATGTT 59.175 37.037 0.00 0.00 34.98 2.71
6640 6757 7.678947 AATCTGAGGTGTTTCTCTTATGTTG 57.321 36.000 0.00 0.00 34.98 3.33
6641 6758 6.419484 TCTGAGGTGTTTCTCTTATGTTGA 57.581 37.500 0.00 0.00 34.98 3.18
6642 6759 6.826668 TCTGAGGTGTTTCTCTTATGTTGAA 58.173 36.000 0.00 0.00 34.98 2.69
6643 6760 7.279615 TCTGAGGTGTTTCTCTTATGTTGAAA 58.720 34.615 0.00 0.00 34.98 2.69
6644 6761 7.226720 TCTGAGGTGTTTCTCTTATGTTGAAAC 59.773 37.037 9.90 9.90 45.51 2.78
6648 6765 5.358298 GTTTCTCTTATGTTGAAACGGCT 57.642 39.130 0.00 0.00 39.70 5.52
6649 6766 5.383130 GTTTCTCTTATGTTGAAACGGCTC 58.617 41.667 0.00 0.00 39.70 4.70
6650 6767 3.596214 TCTCTTATGTTGAAACGGCTCC 58.404 45.455 0.00 0.00 0.00 4.70
6651 6768 2.678336 CTCTTATGTTGAAACGGCTCCC 59.322 50.000 0.00 0.00 0.00 4.30
6652 6769 2.304761 TCTTATGTTGAAACGGCTCCCT 59.695 45.455 0.00 0.00 0.00 4.20
6653 6770 2.871096 TATGTTGAAACGGCTCCCTT 57.129 45.000 0.00 0.00 0.00 3.95
6654 6771 2.871096 ATGTTGAAACGGCTCCCTTA 57.129 45.000 0.00 0.00 0.00 2.69
6655 6772 2.642154 TGTTGAAACGGCTCCCTTAA 57.358 45.000 0.00 0.00 0.00 1.85
6656 6773 2.933573 TGTTGAAACGGCTCCCTTAAA 58.066 42.857 0.00 0.00 0.00 1.52
6657 6774 3.288964 TGTTGAAACGGCTCCCTTAAAA 58.711 40.909 0.00 0.00 0.00 1.52
6658 6775 3.892588 TGTTGAAACGGCTCCCTTAAAAT 59.107 39.130 0.00 0.00 0.00 1.82
6659 6776 5.071370 TGTTGAAACGGCTCCCTTAAAATA 58.929 37.500 0.00 0.00 0.00 1.40
6660 6777 5.182380 TGTTGAAACGGCTCCCTTAAAATAG 59.818 40.000 0.00 0.00 0.00 1.73
6661 6778 4.266714 TGAAACGGCTCCCTTAAAATAGG 58.733 43.478 0.00 0.00 34.92 2.57
6662 6779 2.343484 ACGGCTCCCTTAAAATAGGC 57.657 50.000 0.00 0.00 33.73 3.93
6663 6780 1.844497 ACGGCTCCCTTAAAATAGGCT 59.156 47.619 0.00 0.00 33.73 4.58
6664 6781 2.241430 ACGGCTCCCTTAAAATAGGCTT 59.759 45.455 0.00 0.00 33.73 4.35
6665 6782 3.288092 CGGCTCCCTTAAAATAGGCTTT 58.712 45.455 0.00 0.00 33.73 3.51
6666 6783 3.315470 CGGCTCCCTTAAAATAGGCTTTC 59.685 47.826 0.00 0.00 33.73 2.62
6667 6784 4.278310 GGCTCCCTTAAAATAGGCTTTCA 58.722 43.478 0.00 0.00 33.73 2.69
6668 6785 4.895889 GGCTCCCTTAAAATAGGCTTTCAT 59.104 41.667 0.00 0.00 33.73 2.57
6669 6786 5.010112 GGCTCCCTTAAAATAGGCTTTCATC 59.990 44.000 0.00 0.00 33.73 2.92
6670 6787 5.830457 GCTCCCTTAAAATAGGCTTTCATCT 59.170 40.000 0.00 0.00 33.73 2.90
6671 6788 6.016693 GCTCCCTTAAAATAGGCTTTCATCTC 60.017 42.308 0.00 0.00 33.73 2.75
6672 6789 6.055588 TCCCTTAAAATAGGCTTTCATCTCG 58.944 40.000 0.00 0.00 33.73 4.04
6673 6790 5.823045 CCCTTAAAATAGGCTTTCATCTCGT 59.177 40.000 0.00 0.00 33.73 4.18
6674 6791 6.318900 CCCTTAAAATAGGCTTTCATCTCGTT 59.681 38.462 0.00 0.00 33.73 3.85
6675 6792 7.148069 CCCTTAAAATAGGCTTTCATCTCGTTT 60.148 37.037 0.00 0.00 33.73 3.60
6676 6793 8.244113 CCTTAAAATAGGCTTTCATCTCGTTTT 58.756 33.333 0.00 0.00 0.00 2.43
6681 6798 9.832445 AAATAGGCTTTCATCTCGTTTTATAGA 57.168 29.630 0.00 0.00 0.00 1.98
6685 6802 8.091449 AGGCTTTCATCTCGTTTTATAGATAGG 58.909 37.037 0.00 0.00 31.25 2.57
6686 6803 8.088981 GGCTTTCATCTCGTTTTATAGATAGGA 58.911 37.037 0.00 0.00 31.25 2.94
6687 6804 8.917655 GCTTTCATCTCGTTTTATAGATAGGAC 58.082 37.037 0.00 0.00 31.25 3.85
6688 6805 9.413048 CTTTCATCTCGTTTTATAGATAGGACC 57.587 37.037 0.00 0.00 31.25 4.46
6689 6806 7.463961 TCATCTCGTTTTATAGATAGGACCC 57.536 40.000 0.00 0.00 31.25 4.46
6690 6807 7.239438 TCATCTCGTTTTATAGATAGGACCCT 58.761 38.462 0.00 0.00 31.25 4.34
6691 6808 6.896021 TCTCGTTTTATAGATAGGACCCTG 57.104 41.667 0.00 0.00 0.00 4.45
6692 6809 6.607970 TCTCGTTTTATAGATAGGACCCTGA 58.392 40.000 0.00 0.00 0.00 3.86
6693 6810 7.239438 TCTCGTTTTATAGATAGGACCCTGAT 58.761 38.462 0.00 0.00 0.00 2.90
6694 6811 8.388589 TCTCGTTTTATAGATAGGACCCTGATA 58.611 37.037 0.00 0.00 0.00 2.15
6695 6812 8.945195 TCGTTTTATAGATAGGACCCTGATAA 57.055 34.615 0.00 0.00 0.00 1.75
6696 6813 9.021807 TCGTTTTATAGATAGGACCCTGATAAG 57.978 37.037 0.00 0.00 0.00 1.73
6697 6814 8.804204 CGTTTTATAGATAGGACCCTGATAAGT 58.196 37.037 0.00 0.00 0.00 2.24
6707 6824 4.019231 GGACCCTGATAAGTCCTGAACTTT 60.019 45.833 1.93 0.00 46.26 2.66
6708 6825 5.515008 GGACCCTGATAAGTCCTGAACTTTT 60.515 44.000 1.93 0.00 46.26 2.27
6709 6826 5.316987 ACCCTGATAAGTCCTGAACTTTTG 58.683 41.667 0.00 0.00 46.26 2.44
6710 6827 5.073144 ACCCTGATAAGTCCTGAACTTTTGA 59.927 40.000 0.00 0.00 46.26 2.69
6711 6828 6.003950 CCCTGATAAGTCCTGAACTTTTGAA 58.996 40.000 0.00 0.00 46.26 2.69
6712 6829 6.660949 CCCTGATAAGTCCTGAACTTTTGAAT 59.339 38.462 0.00 0.00 46.26 2.57
6713 6830 7.177392 CCCTGATAAGTCCTGAACTTTTGAATT 59.823 37.037 0.00 0.00 46.26 2.17
6714 6831 8.579863 CCTGATAAGTCCTGAACTTTTGAATTT 58.420 33.333 0.00 0.00 46.26 1.82
6715 6832 9.971922 CTGATAAGTCCTGAACTTTTGAATTTT 57.028 29.630 0.00 0.00 46.26 1.82
6716 6833 9.748708 TGATAAGTCCTGAACTTTTGAATTTTG 57.251 29.630 0.00 0.00 46.26 2.44
6717 6834 6.908870 AAGTCCTGAACTTTTGAATTTTGC 57.091 33.333 0.00 0.00 46.26 3.68
6718 6835 5.359756 AGTCCTGAACTTTTGAATTTTGCC 58.640 37.500 0.00 0.00 33.03 4.52
6719 6836 5.129320 AGTCCTGAACTTTTGAATTTTGCCT 59.871 36.000 0.00 0.00 33.03 4.75
6720 6837 6.323739 AGTCCTGAACTTTTGAATTTTGCCTA 59.676 34.615 0.00 0.00 33.03 3.93
6721 6838 7.015584 AGTCCTGAACTTTTGAATTTTGCCTAT 59.984 33.333 0.00 0.00 33.03 2.57
6722 6839 7.116805 GTCCTGAACTTTTGAATTTTGCCTATG 59.883 37.037 0.00 0.00 0.00 2.23
6723 6840 7.015098 TCCTGAACTTTTGAATTTTGCCTATGA 59.985 33.333 0.00 0.00 0.00 2.15
6724 6841 7.330208 CCTGAACTTTTGAATTTTGCCTATGAG 59.670 37.037 0.00 0.00 0.00 2.90
6725 6842 7.950512 TGAACTTTTGAATTTTGCCTATGAGA 58.049 30.769 0.00 0.00 0.00 3.27
6726 6843 8.420222 TGAACTTTTGAATTTTGCCTATGAGAA 58.580 29.630 0.00 0.00 0.00 2.87
6727 6844 9.260002 GAACTTTTGAATTTTGCCTATGAGAAA 57.740 29.630 0.00 0.00 0.00 2.52
6728 6845 8.593492 ACTTTTGAATTTTGCCTATGAGAAAC 57.407 30.769 0.00 0.00 0.00 2.78
6729 6846 7.382218 ACTTTTGAATTTTGCCTATGAGAAACG 59.618 33.333 0.00 0.00 0.00 3.60
6730 6847 6.567687 TTGAATTTTGCCTATGAGAAACGA 57.432 33.333 0.00 0.00 0.00 3.85
6731 6848 6.567687 TGAATTTTGCCTATGAGAAACGAA 57.432 33.333 0.00 0.00 0.00 3.85
6732 6849 6.378582 TGAATTTTGCCTATGAGAAACGAAC 58.621 36.000 0.00 0.00 0.00 3.95
6733 6850 4.398549 TTTTGCCTATGAGAAACGAACG 57.601 40.909 0.00 0.00 0.00 3.95
6734 6851 2.736144 TGCCTATGAGAAACGAACGT 57.264 45.000 0.00 0.00 0.00 3.99
6735 6852 3.034721 TGCCTATGAGAAACGAACGTT 57.965 42.857 0.00 0.00 40.45 3.99
6737 6854 3.810941 TGCCTATGAGAAACGAACGTTTT 59.189 39.130 22.57 14.14 46.80 2.43
6738 6855 4.273969 TGCCTATGAGAAACGAACGTTTTT 59.726 37.500 22.57 18.26 46.80 1.94
6759 6876 7.626144 TTTTTATGGCAACTTTAGTTTACGC 57.374 32.000 0.00 0.00 35.83 4.42
6760 6877 3.842732 ATGGCAACTTTAGTTTACGCC 57.157 42.857 12.91 12.91 41.94 5.68
6761 6878 2.573369 TGGCAACTTTAGTTTACGCCA 58.427 42.857 16.67 16.67 45.99 5.69
6762 6879 3.150767 TGGCAACTTTAGTTTACGCCAT 58.849 40.909 16.67 0.00 44.46 4.40
6763 6880 3.057876 TGGCAACTTTAGTTTACGCCATG 60.058 43.478 16.67 0.00 44.46 3.66
6764 6881 3.498082 GCAACTTTAGTTTACGCCATGG 58.502 45.455 7.63 7.63 35.83 3.66
6765 6882 3.672241 GCAACTTTAGTTTACGCCATGGG 60.672 47.826 15.13 6.26 35.83 4.00
6766 6883 2.089201 ACTTTAGTTTACGCCATGGGC 58.911 47.619 15.13 4.92 46.75 5.36
6767 6884 4.062622 AACTTTAGTTTACGCCATGGGCA 61.063 43.478 15.13 0.00 41.53 5.36
6768 6885 5.529632 AACTTTAGTTTACGCCATGGGCAA 61.530 41.667 15.13 0.00 41.53 4.52
6769 6886 6.959522 AACTTTAGTTTACGCCATGGGCAAA 61.960 40.000 15.13 4.28 41.53 3.68
6770 6887 8.356547 AACTTTAGTTTACGCCATGGGCAAAA 62.357 38.462 15.13 6.71 41.53 2.44
6771 6888 9.570242 AACTTTAGTTTACGCCATGGGCAAAAT 62.570 37.037 15.13 8.69 41.53 1.82
6778 6895 2.097680 CCATGGGCAAAATCACAACC 57.902 50.000 2.85 0.00 0.00 3.77
6779 6896 1.624813 CCATGGGCAAAATCACAACCT 59.375 47.619 2.85 0.00 0.00 3.50
6780 6897 2.038820 CCATGGGCAAAATCACAACCTT 59.961 45.455 2.85 0.00 0.00 3.50
6781 6898 3.328505 CATGGGCAAAATCACAACCTTC 58.671 45.455 0.00 0.00 0.00 3.46
6782 6899 2.392662 TGGGCAAAATCACAACCTTCA 58.607 42.857 0.00 0.00 0.00 3.02
6783 6900 2.364970 TGGGCAAAATCACAACCTTCAG 59.635 45.455 0.00 0.00 0.00 3.02
6784 6901 2.627699 GGGCAAAATCACAACCTTCAGA 59.372 45.455 0.00 0.00 0.00 3.27
6785 6902 3.069443 GGGCAAAATCACAACCTTCAGAA 59.931 43.478 0.00 0.00 0.00 3.02
6786 6903 4.262592 GGGCAAAATCACAACCTTCAGAAT 60.263 41.667 0.00 0.00 0.00 2.40
6787 6904 5.299949 GGCAAAATCACAACCTTCAGAATT 58.700 37.500 0.00 0.00 0.00 2.17
6788 6905 5.759763 GGCAAAATCACAACCTTCAGAATTT 59.240 36.000 0.00 0.00 0.00 1.82
6789 6906 6.928492 GGCAAAATCACAACCTTCAGAATTTA 59.072 34.615 0.00 0.00 0.00 1.40
6790 6907 7.603784 GGCAAAATCACAACCTTCAGAATTTAT 59.396 33.333 0.00 0.00 0.00 1.40
6791 6908 9.638239 GCAAAATCACAACCTTCAGAATTTATA 57.362 29.630 0.00 0.00 0.00 0.98
6798 6915 9.289303 CACAACCTTCAGAATTTATAATTTCCG 57.711 33.333 13.82 6.70 0.00 4.30
6799 6916 9.020731 ACAACCTTCAGAATTTATAATTTCCGT 57.979 29.630 13.82 3.87 0.00 4.69
6802 6919 9.901172 ACCTTCAGAATTTATAATTTCCGTACT 57.099 29.630 13.82 0.00 0.00 2.73
6814 6931 6.732531 AATTTCCGTACTAAGTAAGCAACC 57.267 37.500 0.00 0.00 0.00 3.77
6815 6932 4.870123 TTCCGTACTAAGTAAGCAACCA 57.130 40.909 0.00 0.00 0.00 3.67
6816 6933 4.178545 TCCGTACTAAGTAAGCAACCAC 57.821 45.455 0.00 0.00 0.00 4.16
6817 6934 3.056607 TCCGTACTAAGTAAGCAACCACC 60.057 47.826 0.00 0.00 0.00 4.61
6818 6935 3.306225 CCGTACTAAGTAAGCAACCACCA 60.306 47.826 0.00 0.00 0.00 4.17
6819 6936 4.501071 CGTACTAAGTAAGCAACCACCAT 58.499 43.478 0.00 0.00 0.00 3.55
6820 6937 4.328983 CGTACTAAGTAAGCAACCACCATG 59.671 45.833 0.00 0.00 0.00 3.66
6821 6938 4.367039 ACTAAGTAAGCAACCACCATGT 57.633 40.909 0.00 0.00 0.00 3.21
6822 6939 4.725490 ACTAAGTAAGCAACCACCATGTT 58.275 39.130 0.00 0.00 0.00 2.71
6823 6940 4.760204 ACTAAGTAAGCAACCACCATGTTC 59.240 41.667 0.00 0.00 0.00 3.18
6824 6941 2.151202 AGTAAGCAACCACCATGTTCG 58.849 47.619 0.00 0.00 0.00 3.95
6825 6942 1.877443 GTAAGCAACCACCATGTTCGT 59.123 47.619 0.00 0.00 0.00 3.85
6826 6943 2.264005 AAGCAACCACCATGTTCGTA 57.736 45.000 0.00 0.00 0.00 3.43
6827 6944 1.519408 AGCAACCACCATGTTCGTAC 58.481 50.000 0.00 0.00 0.00 3.67
6828 6945 1.202710 AGCAACCACCATGTTCGTACA 60.203 47.619 0.00 0.00 38.95 2.90
6829 6946 1.810151 GCAACCACCATGTTCGTACAT 59.190 47.619 1.31 1.31 45.81 2.29
6830 6947 3.004171 GCAACCACCATGTTCGTACATA 58.996 45.455 7.39 0.00 43.07 2.29
6831 6948 3.437395 GCAACCACCATGTTCGTACATAA 59.563 43.478 7.39 0.00 43.07 1.90
6832 6949 4.083217 GCAACCACCATGTTCGTACATAAA 60.083 41.667 7.39 0.00 43.07 1.40
6833 6950 5.563085 GCAACCACCATGTTCGTACATAAAA 60.563 40.000 7.39 0.00 43.07 1.52
6834 6951 5.873179 ACCACCATGTTCGTACATAAAAG 57.127 39.130 7.39 0.94 43.07 2.27
6835 6952 5.553123 ACCACCATGTTCGTACATAAAAGA 58.447 37.500 7.39 0.00 43.07 2.52
6836 6953 5.410439 ACCACCATGTTCGTACATAAAAGAC 59.590 40.000 7.39 0.00 43.07 3.01
6837 6954 5.445407 CCACCATGTTCGTACATAAAAGACG 60.445 44.000 7.39 0.00 43.07 4.18
6838 6955 4.628333 ACCATGTTCGTACATAAAAGACGG 59.372 41.667 7.39 5.74 43.07 4.79
6839 6956 4.033587 CCATGTTCGTACATAAAAGACGGG 59.966 45.833 7.39 0.00 43.07 5.28
6840 6957 4.517952 TGTTCGTACATAAAAGACGGGA 57.482 40.909 0.00 0.00 37.20 5.14
6841 6958 4.880759 TGTTCGTACATAAAAGACGGGAA 58.119 39.130 0.00 0.00 37.20 3.97
6842 6959 4.925054 TGTTCGTACATAAAAGACGGGAAG 59.075 41.667 0.00 0.00 37.20 3.46
6843 6960 4.789012 TCGTACATAAAAGACGGGAAGT 57.211 40.909 0.00 0.00 37.20 3.01
6844 6961 4.487948 TCGTACATAAAAGACGGGAAGTG 58.512 43.478 0.00 0.00 37.20 3.16
6845 6962 3.061697 CGTACATAAAAGACGGGAAGTGC 59.938 47.826 0.00 0.00 33.01 4.40
6846 6963 3.134574 ACATAAAAGACGGGAAGTGCA 57.865 42.857 0.00 0.00 0.00 4.57
6847 6964 3.686016 ACATAAAAGACGGGAAGTGCAT 58.314 40.909 0.00 0.00 0.00 3.96
6848 6965 3.440173 ACATAAAAGACGGGAAGTGCATG 59.560 43.478 0.00 0.00 0.00 4.06
6849 6966 1.981256 AAAAGACGGGAAGTGCATGT 58.019 45.000 0.00 0.00 0.00 3.21
6850 6967 1.523758 AAAGACGGGAAGTGCATGTC 58.476 50.000 0.00 0.00 0.00 3.06
6851 6968 0.321653 AAGACGGGAAGTGCATGTCC 60.322 55.000 9.59 9.59 0.00 4.02
6852 6969 1.003839 GACGGGAAGTGCATGTCCA 60.004 57.895 17.63 0.00 35.44 4.02
6853 6970 0.605319 GACGGGAAGTGCATGTCCAA 60.605 55.000 17.63 0.00 35.44 3.53
6854 6971 0.606401 ACGGGAAGTGCATGTCCAAG 60.606 55.000 17.63 13.51 35.44 3.61
6855 6972 0.321564 CGGGAAGTGCATGTCCAAGA 60.322 55.000 17.63 0.00 35.44 3.02
6856 6973 1.881925 CGGGAAGTGCATGTCCAAGAA 60.882 52.381 17.63 0.00 35.44 2.52
6857 6974 2.238521 GGGAAGTGCATGTCCAAGAAA 58.761 47.619 17.63 0.00 35.44 2.52
6858 6975 2.627699 GGGAAGTGCATGTCCAAGAAAA 59.372 45.455 17.63 0.00 35.44 2.29
6859 6976 3.069443 GGGAAGTGCATGTCCAAGAAAAA 59.931 43.478 17.63 0.00 35.44 1.94
6860 6977 4.262592 GGGAAGTGCATGTCCAAGAAAAAT 60.263 41.667 17.63 0.00 35.44 1.82
6861 6978 5.047377 GGGAAGTGCATGTCCAAGAAAAATA 60.047 40.000 17.63 0.00 35.44 1.40
6862 6979 6.454795 GGAAGTGCATGTCCAAGAAAAATAA 58.545 36.000 12.51 0.00 33.79 1.40
6863 6980 6.928492 GGAAGTGCATGTCCAAGAAAAATAAA 59.072 34.615 12.51 0.00 33.79 1.40
6864 6981 7.440856 GGAAGTGCATGTCCAAGAAAAATAAAA 59.559 33.333 12.51 0.00 33.79 1.52
6865 6982 8.907222 AAGTGCATGTCCAAGAAAAATAAAAT 57.093 26.923 0.00 0.00 0.00 1.82
6866 6983 9.995003 AAGTGCATGTCCAAGAAAAATAAAATA 57.005 25.926 0.00 0.00 0.00 1.40
6867 6984 9.995003 AGTGCATGTCCAAGAAAAATAAAATAA 57.005 25.926 0.00 0.00 0.00 1.40
6881 6998 8.786826 AAAATAAAATAAAAGGTTAGCTGGGC 57.213 30.769 0.00 0.00 0.00 5.36
6882 6999 7.489239 AATAAAATAAAAGGTTAGCTGGGCA 57.511 32.000 0.00 0.00 0.00 5.36
6883 7000 4.801330 AAATAAAAGGTTAGCTGGGCAC 57.199 40.909 0.00 0.00 0.00 5.01
6898 7015 2.432206 GGCACCAACATAAACACACC 57.568 50.000 0.00 0.00 0.00 4.16
6899 7016 1.000394 GGCACCAACATAAACACACCC 60.000 52.381 0.00 0.00 0.00 4.61
6900 7017 1.683917 GCACCAACATAAACACACCCA 59.316 47.619 0.00 0.00 0.00 4.51
6901 7018 2.101582 GCACCAACATAAACACACCCAA 59.898 45.455 0.00 0.00 0.00 4.12
6902 7019 3.430929 GCACCAACATAAACACACCCAAA 60.431 43.478 0.00 0.00 0.00 3.28
6903 7020 4.759782 CACCAACATAAACACACCCAAAA 58.240 39.130 0.00 0.00 0.00 2.44
6904 7021 4.808364 CACCAACATAAACACACCCAAAAG 59.192 41.667 0.00 0.00 0.00 2.27
6905 7022 3.807071 CCAACATAAACACACCCAAAAGC 59.193 43.478 0.00 0.00 0.00 3.51
6906 7023 4.437239 CAACATAAACACACCCAAAAGCA 58.563 39.130 0.00 0.00 0.00 3.91
6907 7024 4.744795 ACATAAACACACCCAAAAGCAA 57.255 36.364 0.00 0.00 0.00 3.91
6908 7025 5.091261 ACATAAACACACCCAAAAGCAAA 57.909 34.783 0.00 0.00 0.00 3.68
6909 7026 5.491982 ACATAAACACACCCAAAAGCAAAA 58.508 33.333 0.00 0.00 0.00 2.44
6910 7027 5.584251 ACATAAACACACCCAAAAGCAAAAG 59.416 36.000 0.00 0.00 0.00 2.27
6911 7028 3.694043 AACACACCCAAAAGCAAAAGT 57.306 38.095 0.00 0.00 0.00 2.66
6912 7029 4.810191 AACACACCCAAAAGCAAAAGTA 57.190 36.364 0.00 0.00 0.00 2.24
6913 7030 5.351948 AACACACCCAAAAGCAAAAGTAT 57.648 34.783 0.00 0.00 0.00 2.12
6914 7031 5.351948 ACACACCCAAAAGCAAAAGTATT 57.648 34.783 0.00 0.00 0.00 1.89
6915 7032 6.472686 ACACACCCAAAAGCAAAAGTATTA 57.527 33.333 0.00 0.00 0.00 0.98
6916 7033 6.512297 ACACACCCAAAAGCAAAAGTATTAG 58.488 36.000 0.00 0.00 0.00 1.73
6917 7034 6.322712 ACACACCCAAAAGCAAAAGTATTAGA 59.677 34.615 0.00 0.00 0.00 2.10
6918 7035 7.015195 ACACACCCAAAAGCAAAAGTATTAGAT 59.985 33.333 0.00 0.00 0.00 1.98
6919 7036 8.519526 CACACCCAAAAGCAAAAGTATTAGATA 58.480 33.333 0.00 0.00 0.00 1.98
6920 7037 9.255029 ACACCCAAAAGCAAAAGTATTAGATAT 57.745 29.630 0.00 0.00 0.00 1.63
6921 7038 9.520204 CACCCAAAAGCAAAAGTATTAGATATG 57.480 33.333 0.00 0.00 0.00 1.78
6922 7039 8.197439 ACCCAAAAGCAAAAGTATTAGATATGC 58.803 33.333 0.00 0.00 0.00 3.14
6923 7040 7.653311 CCCAAAAGCAAAAGTATTAGATATGCC 59.347 37.037 0.00 0.00 32.95 4.40
6924 7041 8.416329 CCAAAAGCAAAAGTATTAGATATGCCT 58.584 33.333 0.00 0.00 32.95 4.75
6925 7042 9.807649 CAAAAGCAAAAGTATTAGATATGCCTT 57.192 29.630 0.00 0.00 32.95 4.35
6940 7057 8.910351 AGATATGCCTTAGATACAAAACTTCC 57.090 34.615 0.00 0.00 0.00 3.46
6941 7058 7.657761 AGATATGCCTTAGATACAAAACTTCCG 59.342 37.037 0.00 0.00 0.00 4.30
6942 7059 5.155278 TGCCTTAGATACAAAACTTCCGA 57.845 39.130 0.00 0.00 0.00 4.55
6943 7060 5.175859 TGCCTTAGATACAAAACTTCCGAG 58.824 41.667 0.00 0.00 0.00 4.63
6944 7061 5.046878 TGCCTTAGATACAAAACTTCCGAGA 60.047 40.000 0.00 0.00 0.00 4.04
6945 7062 5.520649 GCCTTAGATACAAAACTTCCGAGAG 59.479 44.000 0.00 0.00 0.00 3.20
6946 7063 5.520649 CCTTAGATACAAAACTTCCGAGAGC 59.479 44.000 0.00 0.00 0.00 4.09
6947 7064 3.863041 AGATACAAAACTTCCGAGAGCC 58.137 45.455 0.00 0.00 0.00 4.70
6948 7065 3.260884 AGATACAAAACTTCCGAGAGCCA 59.739 43.478 0.00 0.00 0.00 4.75
6949 7066 2.341846 ACAAAACTTCCGAGAGCCAA 57.658 45.000 0.00 0.00 0.00 4.52
6950 7067 2.650322 ACAAAACTTCCGAGAGCCAAA 58.350 42.857 0.00 0.00 0.00 3.28
6951 7068 3.020984 ACAAAACTTCCGAGAGCCAAAA 58.979 40.909 0.00 0.00 0.00 2.44
6952 7069 3.066760 ACAAAACTTCCGAGAGCCAAAAG 59.933 43.478 0.00 0.00 0.00 2.27
6953 7070 2.930826 AACTTCCGAGAGCCAAAAGA 57.069 45.000 0.00 0.00 0.00 2.52
6954 7071 3.425162 AACTTCCGAGAGCCAAAAGAT 57.575 42.857 0.00 0.00 0.00 2.40
6955 7072 2.979240 ACTTCCGAGAGCCAAAAGATC 58.021 47.619 0.00 0.00 0.00 2.75
6956 7073 2.569404 ACTTCCGAGAGCCAAAAGATCT 59.431 45.455 0.00 0.00 46.26 2.75
6957 7074 2.680312 TCCGAGAGCCAAAAGATCTG 57.320 50.000 0.00 0.00 42.71 2.90
6958 7075 1.012841 CCGAGAGCCAAAAGATCTGC 58.987 55.000 0.00 0.00 42.71 4.26
6959 7076 1.676916 CCGAGAGCCAAAAGATCTGCA 60.677 52.381 0.00 0.00 42.71 4.41
6960 7077 1.664659 CGAGAGCCAAAAGATCTGCAG 59.335 52.381 7.63 7.63 42.71 4.41
6961 7078 2.015587 GAGAGCCAAAAGATCTGCAGG 58.984 52.381 15.13 0.00 42.71 4.85
6962 7079 1.101331 GAGCCAAAAGATCTGCAGGG 58.899 55.000 15.13 6.20 0.00 4.45
6963 7080 0.407139 AGCCAAAAGATCTGCAGGGT 59.593 50.000 15.13 2.64 0.00 4.34
6964 7081 1.635487 AGCCAAAAGATCTGCAGGGTA 59.365 47.619 15.13 0.00 0.00 3.69
6965 7082 2.019984 GCCAAAAGATCTGCAGGGTAG 58.980 52.381 15.13 0.00 0.00 3.18
6966 7083 2.356125 GCCAAAAGATCTGCAGGGTAGA 60.356 50.000 15.13 0.00 0.00 2.59
6967 7084 3.539604 CCAAAAGATCTGCAGGGTAGAG 58.460 50.000 15.13 0.00 0.00 2.43
6968 7085 3.539604 CAAAAGATCTGCAGGGTAGAGG 58.460 50.000 15.13 0.00 0.00 3.69
6969 7086 1.799933 AAGATCTGCAGGGTAGAGGG 58.200 55.000 15.13 0.00 0.00 4.30
6970 7087 0.937441 AGATCTGCAGGGTAGAGGGA 59.063 55.000 15.13 0.00 0.00 4.20
6971 7088 1.133199 AGATCTGCAGGGTAGAGGGAG 60.133 57.143 15.13 0.00 0.00 4.30
6972 7089 0.937441 ATCTGCAGGGTAGAGGGAGA 59.063 55.000 15.13 0.00 33.48 3.71
6973 7090 0.937441 TCTGCAGGGTAGAGGGAGAT 59.063 55.000 15.13 0.00 0.00 2.75
6974 7091 1.133325 TCTGCAGGGTAGAGGGAGATC 60.133 57.143 15.13 0.00 0.00 2.75
6975 7092 0.636647 TGCAGGGTAGAGGGAGATCA 59.363 55.000 0.00 0.00 0.00 2.92
6976 7093 1.221523 TGCAGGGTAGAGGGAGATCAT 59.778 52.381 0.00 0.00 0.00 2.45
6977 7094 1.899142 GCAGGGTAGAGGGAGATCATC 59.101 57.143 0.00 0.00 0.00 2.92
6978 7095 2.757950 GCAGGGTAGAGGGAGATCATCA 60.758 54.545 0.00 0.00 0.00 3.07
6979 7096 3.581101 CAGGGTAGAGGGAGATCATCAA 58.419 50.000 0.00 0.00 0.00 2.57
6980 7097 4.166539 CAGGGTAGAGGGAGATCATCAAT 58.833 47.826 0.00 0.00 0.00 2.57
6981 7098 4.222588 CAGGGTAGAGGGAGATCATCAATC 59.777 50.000 0.00 0.00 34.30 2.67
6982 7099 4.140591 AGGGTAGAGGGAGATCATCAATCA 60.141 45.833 0.00 0.00 36.79 2.57
6983 7100 4.782156 GGGTAGAGGGAGATCATCAATCAT 59.218 45.833 0.00 0.00 36.79 2.45
6984 7101 5.338219 GGGTAGAGGGAGATCATCAATCATG 60.338 48.000 0.00 0.00 36.79 3.07
6985 7102 4.289238 AGAGGGAGATCATCAATCATGC 57.711 45.455 0.00 0.00 36.79 4.06
6986 7103 3.009253 AGAGGGAGATCATCAATCATGCC 59.991 47.826 0.00 0.00 36.79 4.40
6987 7104 2.714793 AGGGAGATCATCAATCATGCCA 59.285 45.455 0.00 0.00 36.79 4.92
6988 7105 2.818432 GGGAGATCATCAATCATGCCAC 59.182 50.000 0.00 0.00 36.79 5.01
6989 7106 2.818432 GGAGATCATCAATCATGCCACC 59.182 50.000 0.00 0.00 36.79 4.61
6990 7107 3.498121 GGAGATCATCAATCATGCCACCT 60.498 47.826 0.00 0.00 36.79 4.00
6991 7108 4.263199 GGAGATCATCAATCATGCCACCTA 60.263 45.833 0.00 0.00 36.79 3.08
6992 7109 4.907809 AGATCATCAATCATGCCACCTAG 58.092 43.478 0.00 0.00 36.79 3.02
6993 7110 2.854963 TCATCAATCATGCCACCTAGC 58.145 47.619 0.00 0.00 31.70 3.42
6994 7111 1.884579 CATCAATCATGCCACCTAGCC 59.115 52.381 0.00 0.00 0.00 3.93
6995 7112 0.179048 TCAATCATGCCACCTAGCCG 60.179 55.000 0.00 0.00 0.00 5.52
6996 7113 0.179048 CAATCATGCCACCTAGCCGA 60.179 55.000 0.00 0.00 0.00 5.54
6997 7114 0.107456 AATCATGCCACCTAGCCGAG 59.893 55.000 0.00 0.00 0.00 4.63
7006 7123 3.071580 CCTAGCCGAGGCAAGAAAG 57.928 57.895 17.18 5.37 44.88 2.62
7007 7124 1.092345 CCTAGCCGAGGCAAGAAAGC 61.092 60.000 17.18 0.00 44.88 3.51
7008 7125 0.107945 CTAGCCGAGGCAAGAAAGCT 60.108 55.000 17.18 0.00 44.88 3.74
7009 7126 1.137086 CTAGCCGAGGCAAGAAAGCTA 59.863 52.381 17.18 0.00 44.88 3.32
7010 7127 0.391793 AGCCGAGGCAAGAAAGCTAC 60.392 55.000 17.18 0.00 44.88 3.58
7011 7128 0.673644 GCCGAGGCAAGAAAGCTACA 60.674 55.000 9.58 0.00 41.49 2.74
7012 7129 1.808411 CCGAGGCAAGAAAGCTACAA 58.192 50.000 0.00 0.00 34.17 2.41
7013 7130 2.151202 CCGAGGCAAGAAAGCTACAAA 58.849 47.619 0.00 0.00 34.17 2.83
7014 7131 2.749621 CCGAGGCAAGAAAGCTACAAAT 59.250 45.455 0.00 0.00 34.17 2.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 5.353678 CACACACAAAAATGTTGATTGGGTT 59.646 36.000 0.00 0.00 38.57 4.11
17 18 6.698008 TCTTCTCATCACACACAAAAATGT 57.302 33.333 0.00 0.00 0.00 2.71
18 19 7.990541 TTTCTTCTCATCACACACAAAAATG 57.009 32.000 0.00 0.00 0.00 2.32
20 21 7.330700 GGTTTTTCTTCTCATCACACACAAAAA 59.669 33.333 0.00 0.00 0.00 1.94
23 24 5.417266 TGGTTTTTCTTCTCATCACACACAA 59.583 36.000 0.00 0.00 0.00 3.33
32 33 6.707608 GGATTTTTGCTGGTTTTTCTTCTCAT 59.292 34.615 0.00 0.00 0.00 2.90
33 34 6.048509 GGATTTTTGCTGGTTTTTCTTCTCA 58.951 36.000 0.00 0.00 0.00 3.27
34 35 5.466728 GGGATTTTTGCTGGTTTTTCTTCTC 59.533 40.000 0.00 0.00 0.00 2.87
39 40 3.814625 TGGGGATTTTTGCTGGTTTTTC 58.185 40.909 0.00 0.00 0.00 2.29
40 41 3.457749 TCTGGGGATTTTTGCTGGTTTTT 59.542 39.130 0.00 0.00 0.00 1.94
41 42 3.044894 TCTGGGGATTTTTGCTGGTTTT 58.955 40.909 0.00 0.00 0.00 2.43
45 46 0.533951 GCTCTGGGGATTTTTGCTGG 59.466 55.000 0.00 0.00 0.00 4.85
46 47 1.259609 TGCTCTGGGGATTTTTGCTG 58.740 50.000 0.00 0.00 0.00 4.41
56 57 0.031994 CGTTTTTGGTTGCTCTGGGG 59.968 55.000 0.00 0.00 0.00 4.96
394 398 1.121407 CCAGACCAGACCAGACACCA 61.121 60.000 0.00 0.00 0.00 4.17
396 400 0.318762 GACCAGACCAGACCAGACAC 59.681 60.000 0.00 0.00 0.00 3.67
397 401 0.188587 AGACCAGACCAGACCAGACA 59.811 55.000 0.00 0.00 0.00 3.41
399 403 1.188219 GCAGACCAGACCAGACCAGA 61.188 60.000 0.00 0.00 0.00 3.86
400 404 1.294780 GCAGACCAGACCAGACCAG 59.705 63.158 0.00 0.00 0.00 4.00
402 406 2.665603 GGCAGACCAGACCAGACC 59.334 66.667 0.00 0.00 35.26 3.85
532 562 0.250234 CCCGAGCTCATTCAACTCCA 59.750 55.000 15.40 0.00 0.00 3.86
533 563 1.092345 GCCCGAGCTCATTCAACTCC 61.092 60.000 15.40 0.00 35.50 3.85
628 665 1.608717 CCCCGGTGAACAGGAGAGAG 61.609 65.000 0.00 0.00 32.68 3.20
675 715 4.115199 AAGCCGGACAGGGGATGC 62.115 66.667 5.05 0.00 41.48 3.91
676 716 2.124570 CAAGCCGGACAGGGGATG 60.125 66.667 5.05 0.00 41.48 3.51
677 717 3.411517 CCAAGCCGGACAGGGGAT 61.412 66.667 5.05 0.00 41.48 3.85
678 718 4.649705 TCCAAGCCGGACAGGGGA 62.650 66.667 5.05 0.30 39.64 4.81
685 725 2.513259 AACGAACCTCCAAGCCGGA 61.513 57.895 5.05 0.00 43.61 5.14
764 804 2.998480 TAACCGAAGCCCGAGCCA 60.998 61.111 0.00 0.00 41.25 4.75
832 872 2.970974 GCTGCTTCGTCCAACCTGC 61.971 63.158 0.00 0.00 0.00 4.85
1073 1118 4.018506 TGAACAGCTGAATTAATGAGGGGA 60.019 41.667 23.35 0.00 0.00 4.81
1112 1157 3.286353 TCCACTAGAGATGCAGACAGAG 58.714 50.000 0.00 0.00 0.00 3.35
1127 1172 5.104693 ACATTCCACAATCCGTAATCCACTA 60.105 40.000 0.00 0.00 0.00 2.74
1524 1574 2.158813 TGGAAAATAGATGACCCGGCTC 60.159 50.000 0.00 0.00 0.00 4.70
1931 1986 4.135306 ACATTATGAAGCTGGCAGATCAG 58.865 43.478 20.86 11.50 37.79 2.90
1979 2034 3.144506 CATGATGGTCCCTTCTATGTGC 58.855 50.000 0.00 0.00 0.00 4.57
2040 2095 4.170062 CTGCATCGGCCTGCGTTG 62.170 66.667 11.96 2.03 45.30 4.10
2121 2176 3.054802 AGAATCCAGGCTACAAGAACAGG 60.055 47.826 0.00 0.00 0.00 4.00
2173 2228 8.992073 CCTCGTGATGAATACATAATGATTTCA 58.008 33.333 0.00 0.00 33.78 2.69
2174 2229 8.993121 ACCTCGTGATGAATACATAATGATTTC 58.007 33.333 0.00 0.00 33.78 2.17
2176 2231 8.908786 AACCTCGTGATGAATACATAATGATT 57.091 30.769 0.00 0.00 33.78 2.57
2178 2233 6.929049 GGAACCTCGTGATGAATACATAATGA 59.071 38.462 0.00 0.00 36.82 2.57
2179 2234 6.705825 TGGAACCTCGTGATGAATACATAATG 59.294 38.462 0.00 0.00 36.82 1.90
2417 2472 8.706492 ATGTAAAATGCACAAAATATGACCAG 57.294 30.769 0.00 0.00 0.00 4.00
2822 2883 9.066892 GCAACATGGGAACTATAATAGATGAAA 57.933 33.333 0.00 0.00 0.00 2.69
2830 2891 6.006275 ACTCTGCAACATGGGAACTATAAT 57.994 37.500 0.00 0.00 0.00 1.28
2879 2941 6.013293 AGGCCAACTAAGAGTCCAATATATCC 60.013 42.308 5.01 0.00 0.00 2.59
2880 2942 6.876257 CAGGCCAACTAAGAGTCCAATATATC 59.124 42.308 5.01 0.00 0.00 1.63
2881 2943 6.330250 ACAGGCCAACTAAGAGTCCAATATAT 59.670 38.462 5.01 0.00 0.00 0.86
2882 2944 5.665812 ACAGGCCAACTAAGAGTCCAATATA 59.334 40.000 5.01 0.00 0.00 0.86
3043 3106 5.181811 GGTAACAGCGTAAAATTGGTTAGGT 59.818 40.000 0.00 0.00 0.00 3.08
3496 3561 6.882610 TTCATGCTGTTACTCAGTTCAATT 57.117 33.333 0.00 0.00 45.23 2.32
3528 3593 6.173339 TCTGAAAGAAGAACAAACTGTCAGT 58.827 36.000 0.00 0.00 42.31 3.41
3635 3700 3.118629 GCAGGTACTCTGGAATCATGACA 60.119 47.826 0.00 0.00 43.54 3.58
3671 3736 7.125811 AGAGCTAATAGGTTGAGGTGAATAACA 59.874 37.037 0.00 0.00 0.00 2.41
3774 3839 0.974383 ACTCGTCCCAACCAACCTAG 59.026 55.000 0.00 0.00 0.00 3.02
3926 3991 3.719268 TCAGCCTACCATTGAACATGT 57.281 42.857 0.00 0.00 0.00 3.21
4021 4086 3.809279 CCTGCGCATATGATACAGAACAA 59.191 43.478 12.24 0.00 0.00 2.83
4063 4128 5.679894 GCCACATGAGAGAAGAATAACGAGA 60.680 44.000 0.00 0.00 0.00 4.04
4468 4533 2.437180 CTGATGCCCTTGCTGCGA 60.437 61.111 0.00 0.00 38.71 5.10
4557 4622 0.531532 CGGAACCAGGCATGCTAGAG 60.532 60.000 18.92 6.82 0.00 2.43
4860 4925 1.214062 GTCTCTCGCTGACTGTGGG 59.786 63.158 0.00 0.00 0.00 4.61
4872 4937 0.383949 GGACGCTGGATGAGTCTCTC 59.616 60.000 0.65 0.00 43.56 3.20
4887 4952 0.676466 TTGCACCATAAGCCTGGACG 60.676 55.000 0.00 0.00 39.73 4.79
5068 5133 1.070289 GAAGGTTCCCGATTCGCCTAT 59.930 52.381 0.00 0.00 0.00 2.57
5219 5284 4.667519 ACCGATCCACATTACCTCTTAC 57.332 45.455 0.00 0.00 0.00 2.34
5227 5292 5.306937 AGATCCACATTACCGATCCACATTA 59.693 40.000 0.00 0.00 34.22 1.90
5231 5296 3.069586 TCAGATCCACATTACCGATCCAC 59.930 47.826 0.00 0.00 34.22 4.02
5286 5351 2.371841 TGAACTCTTTGCCTCTAAGCCA 59.628 45.455 0.00 0.00 0.00 4.75
5288 5353 6.934048 AATATGAACTCTTTGCCTCTAAGC 57.066 37.500 0.00 0.00 0.00 3.09
5293 5358 6.038714 CCAACCTAATATGAACTCTTTGCCTC 59.961 42.308 0.00 0.00 0.00 4.70
5294 5359 5.888161 CCAACCTAATATGAACTCTTTGCCT 59.112 40.000 0.00 0.00 0.00 4.75
5295 5360 5.450550 GCCAACCTAATATGAACTCTTTGCC 60.451 44.000 0.00 0.00 0.00 4.52
5296 5361 5.358160 AGCCAACCTAATATGAACTCTTTGC 59.642 40.000 0.00 0.00 0.00 3.68
5297 5362 7.396540 AAGCCAACCTAATATGAACTCTTTG 57.603 36.000 0.00 0.00 0.00 2.77
5298 5363 8.548877 TCTAAGCCAACCTAATATGAACTCTTT 58.451 33.333 0.00 0.00 0.00 2.52
5299 5364 8.090788 TCTAAGCCAACCTAATATGAACTCTT 57.909 34.615 0.00 0.00 0.00 2.85
5311 5376 2.910319 TCTTTGCCTCTAAGCCAACCTA 59.090 45.455 0.00 0.00 0.00 3.08
5316 5381 2.371841 TGAACTCTTTGCCTCTAAGCCA 59.628 45.455 0.00 0.00 0.00 4.75
5516 5586 5.359860 GGGACCCTGATTTGTAAACCTAATG 59.640 44.000 2.09 0.00 0.00 1.90
5591 5661 2.877168 CAAATAGATGCTCCAGCTCACC 59.123 50.000 0.00 0.00 42.66 4.02
5744 5814 7.137490 AGATCGGATTTATTGTATGTGCATG 57.863 36.000 0.00 0.00 0.00 4.06
5762 5832 1.298713 CGCACGAAGAGGAGATCGG 60.299 63.158 0.00 0.00 43.11 4.18
5780 5850 3.124636 AGAACGGCATTCGAACATGTTAC 59.875 43.478 11.95 4.61 42.69 2.50
5787 5857 1.135774 GGGAAAGAACGGCATTCGAAC 60.136 52.381 0.00 0.00 42.69 3.95
6023 6093 2.561419 CTGGTTTAGTTCTGGACTCCGA 59.439 50.000 0.00 0.00 39.86 4.55
6048 6123 1.972795 TGATGATGATGCGATCCTGGA 59.027 47.619 0.00 0.00 0.00 3.86
6055 6132 3.059166 CAATACCGTGATGATGATGCGA 58.941 45.455 0.00 0.00 0.00 5.10
6060 6137 2.469826 GTCGCAATACCGTGATGATGA 58.530 47.619 0.00 0.00 0.00 2.92
6061 6138 1.190103 CGTCGCAATACCGTGATGATG 59.810 52.381 0.00 0.00 34.92 3.07
6062 6139 1.202371 ACGTCGCAATACCGTGATGAT 60.202 47.619 0.00 0.00 36.21 2.45
6063 6140 0.171679 ACGTCGCAATACCGTGATGA 59.828 50.000 0.00 0.00 36.21 2.92
6106 6185 1.144936 GTTCATGGCGAGGAGAGGG 59.855 63.158 0.00 0.00 0.00 4.30
6184 6267 2.510238 AGCCGAAGCAGCGATCAC 60.510 61.111 0.00 0.00 43.56 3.06
6302 6387 5.105228 TCGGAATACTCGGTTTTAGGTCATT 60.105 40.000 0.00 0.00 0.00 2.57
6331 6416 4.386711 CCGGGATAATCAGTTTTAGGTCC 58.613 47.826 0.00 0.00 0.00 4.46
6363 6448 5.527582 ACACTTAATTCACAGCGAAAAGTCT 59.472 36.000 0.00 0.00 34.05 3.24
6374 6459 4.454161 CGGATCAACCACACTTAATTCACA 59.546 41.667 0.00 0.00 38.90 3.58
6380 6465 1.816074 GGCGGATCAACCACACTTAA 58.184 50.000 0.00 0.00 38.90 1.85
6516 6628 0.691078 AGGGAAGCGAATGGCCTCTA 60.691 55.000 3.32 0.00 45.17 2.43
6538 6652 2.559998 ACTTTTGACGTGCCAAACAG 57.440 45.000 0.00 2.06 35.95 3.16
6539 6653 3.305398 AAACTTTTGACGTGCCAAACA 57.695 38.095 0.00 0.00 35.95 2.83
6540 6654 3.430556 ACAAAACTTTTGACGTGCCAAAC 59.569 39.130 19.07 0.00 35.95 2.93
6541 6655 3.654414 ACAAAACTTTTGACGTGCCAAA 58.346 36.364 19.07 0.00 34.56 3.28
6598 6714 7.016153 TCAGATTACCAACTATCCACAAACT 57.984 36.000 0.00 0.00 0.00 2.66
6599 6715 6.316390 CCTCAGATTACCAACTATCCACAAAC 59.684 42.308 0.00 0.00 0.00 2.93
6600 6716 6.012858 ACCTCAGATTACCAACTATCCACAAA 60.013 38.462 0.00 0.00 0.00 2.83
6602 6718 5.030147 ACCTCAGATTACCAACTATCCACA 58.970 41.667 0.00 0.00 0.00 4.17
6605 6721 5.615925 ACACCTCAGATTACCAACTATCC 57.384 43.478 0.00 0.00 0.00 2.59
6607 6723 7.181125 AGAGAAACACCTCAGATTACCAACTAT 59.819 37.037 0.00 0.00 35.68 2.12
6610 6726 5.552178 AGAGAAACACCTCAGATTACCAAC 58.448 41.667 0.00 0.00 35.68 3.77
6612 6728 5.825593 AAGAGAAACACCTCAGATTACCA 57.174 39.130 0.00 0.00 35.68 3.25
6613 6729 7.331791 ACATAAGAGAAACACCTCAGATTACC 58.668 38.462 0.00 0.00 35.68 2.85
6615 6731 8.593679 TCAACATAAGAGAAACACCTCAGATTA 58.406 33.333 0.00 0.00 35.68 1.75
6616 6732 7.453393 TCAACATAAGAGAAACACCTCAGATT 58.547 34.615 0.00 0.00 35.68 2.40
6637 6754 3.994204 TTTTAAGGGAGCCGTTTCAAC 57.006 42.857 0.00 0.00 0.00 3.18
6638 6755 4.703093 CCTATTTTAAGGGAGCCGTTTCAA 59.297 41.667 0.00 0.00 32.55 2.69
6639 6756 4.266714 CCTATTTTAAGGGAGCCGTTTCA 58.733 43.478 0.00 0.00 32.55 2.69
6640 6757 3.066342 GCCTATTTTAAGGGAGCCGTTTC 59.934 47.826 0.00 0.00 37.11 2.78
6641 6758 3.021695 GCCTATTTTAAGGGAGCCGTTT 58.978 45.455 0.00 0.00 37.11 3.60
6642 6759 2.241430 AGCCTATTTTAAGGGAGCCGTT 59.759 45.455 0.00 0.00 37.11 4.44
6643 6760 1.844497 AGCCTATTTTAAGGGAGCCGT 59.156 47.619 0.00 0.00 37.11 5.68
6644 6761 2.640316 AGCCTATTTTAAGGGAGCCG 57.360 50.000 0.00 0.00 37.11 5.52
6645 6762 4.278310 TGAAAGCCTATTTTAAGGGAGCC 58.722 43.478 0.00 0.00 37.11 4.70
6646 6763 5.830457 AGATGAAAGCCTATTTTAAGGGAGC 59.170 40.000 0.00 0.00 37.11 4.70
6647 6764 6.203723 CGAGATGAAAGCCTATTTTAAGGGAG 59.796 42.308 0.00 0.00 37.11 4.30
6648 6765 6.055588 CGAGATGAAAGCCTATTTTAAGGGA 58.944 40.000 0.00 0.00 37.11 4.20
6649 6766 5.823045 ACGAGATGAAAGCCTATTTTAAGGG 59.177 40.000 0.00 0.00 37.11 3.95
6650 6767 6.927294 ACGAGATGAAAGCCTATTTTAAGG 57.073 37.500 0.00 0.00 39.87 2.69
6655 6772 9.832445 TCTATAAAACGAGATGAAAGCCTATTT 57.168 29.630 0.00 0.00 0.00 1.40
6659 6776 8.091449 CCTATCTATAAAACGAGATGAAAGCCT 58.909 37.037 0.00 0.00 34.28 4.58
6660 6777 8.088981 TCCTATCTATAAAACGAGATGAAAGCC 58.911 37.037 0.00 0.00 34.28 4.35
6661 6778 8.917655 GTCCTATCTATAAAACGAGATGAAAGC 58.082 37.037 0.00 0.00 34.28 3.51
6662 6779 9.413048 GGTCCTATCTATAAAACGAGATGAAAG 57.587 37.037 0.00 0.00 34.28 2.62
6663 6780 8.365647 GGGTCCTATCTATAAAACGAGATGAAA 58.634 37.037 0.00 0.00 34.28 2.69
6664 6781 7.728981 AGGGTCCTATCTATAAAACGAGATGAA 59.271 37.037 0.00 0.00 34.28 2.57
6665 6782 7.176865 CAGGGTCCTATCTATAAAACGAGATGA 59.823 40.741 0.00 0.00 34.28 2.92
6666 6783 7.176865 TCAGGGTCCTATCTATAAAACGAGATG 59.823 40.741 0.00 0.00 34.28 2.90
6667 6784 7.239438 TCAGGGTCCTATCTATAAAACGAGAT 58.761 38.462 0.00 0.00 36.40 2.75
6668 6785 6.607970 TCAGGGTCCTATCTATAAAACGAGA 58.392 40.000 0.00 0.00 0.00 4.04
6669 6786 6.896021 TCAGGGTCCTATCTATAAAACGAG 57.104 41.667 0.00 0.00 0.00 4.18
6670 6787 8.945195 TTATCAGGGTCCTATCTATAAAACGA 57.055 34.615 0.00 0.00 0.00 3.85
6671 6788 8.804204 ACTTATCAGGGTCCTATCTATAAAACG 58.196 37.037 0.00 0.00 0.00 3.60
6673 6790 9.322769 GGACTTATCAGGGTCCTATCTATAAAA 57.677 37.037 5.04 0.00 45.99 1.52
6674 6791 8.896722 GGACTTATCAGGGTCCTATCTATAAA 57.103 38.462 5.04 0.00 45.99 1.40
6684 6801 3.519913 AAGTTCAGGACTTATCAGGGTCC 59.480 47.826 0.00 4.17 46.61 4.46
6685 6802 4.828072 AAGTTCAGGACTTATCAGGGTC 57.172 45.455 0.00 0.00 46.61 4.46
6695 6812 5.129320 AGGCAAAATTCAAAAGTTCAGGACT 59.871 36.000 0.00 0.00 41.47 3.85
6696 6813 5.359756 AGGCAAAATTCAAAAGTTCAGGAC 58.640 37.500 0.00 0.00 0.00 3.85
6697 6814 5.612725 AGGCAAAATTCAAAAGTTCAGGA 57.387 34.783 0.00 0.00 0.00 3.86
6698 6815 7.153985 TCATAGGCAAAATTCAAAAGTTCAGG 58.846 34.615 0.00 0.00 0.00 3.86
6699 6816 8.084073 TCTCATAGGCAAAATTCAAAAGTTCAG 58.916 33.333 0.00 0.00 0.00 3.02
6700 6817 7.950512 TCTCATAGGCAAAATTCAAAAGTTCA 58.049 30.769 0.00 0.00 0.00 3.18
6701 6818 8.816640 TTCTCATAGGCAAAATTCAAAAGTTC 57.183 30.769 0.00 0.00 0.00 3.01
6702 6819 9.045223 GTTTCTCATAGGCAAAATTCAAAAGTT 57.955 29.630 0.00 0.00 0.00 2.66
6703 6820 7.382218 CGTTTCTCATAGGCAAAATTCAAAAGT 59.618 33.333 0.00 0.00 0.00 2.66
6704 6821 7.594758 TCGTTTCTCATAGGCAAAATTCAAAAG 59.405 33.333 0.00 0.00 0.00 2.27
6705 6822 7.429633 TCGTTTCTCATAGGCAAAATTCAAAA 58.570 30.769 0.00 0.00 0.00 2.44
6706 6823 6.976088 TCGTTTCTCATAGGCAAAATTCAAA 58.024 32.000 0.00 0.00 0.00 2.69
6707 6824 6.567687 TCGTTTCTCATAGGCAAAATTCAA 57.432 33.333 0.00 0.00 0.00 2.69
6708 6825 6.378582 GTTCGTTTCTCATAGGCAAAATTCA 58.621 36.000 0.00 0.00 0.00 2.57
6709 6826 5.508224 CGTTCGTTTCTCATAGGCAAAATTC 59.492 40.000 0.00 0.00 0.00 2.17
6710 6827 5.048991 ACGTTCGTTTCTCATAGGCAAAATT 60.049 36.000 0.00 0.00 0.00 1.82
6711 6828 4.454504 ACGTTCGTTTCTCATAGGCAAAAT 59.545 37.500 0.00 0.00 0.00 1.82
6712 6829 3.810941 ACGTTCGTTTCTCATAGGCAAAA 59.189 39.130 0.00 0.00 0.00 2.44
6713 6830 3.395639 ACGTTCGTTTCTCATAGGCAAA 58.604 40.909 0.00 0.00 0.00 3.68
6714 6831 3.034721 ACGTTCGTTTCTCATAGGCAA 57.965 42.857 0.00 0.00 0.00 4.52
6715 6832 2.736144 ACGTTCGTTTCTCATAGGCA 57.264 45.000 0.00 0.00 0.00 4.75
6716 6833 4.400036 AAAACGTTCGTTTCTCATAGGC 57.600 40.909 20.59 0.00 37.35 3.93
6735 6852 6.641723 GGCGTAAACTAAAGTTGCCATAAAAA 59.358 34.615 14.54 0.00 41.51 1.94
6736 6853 6.151004 GGCGTAAACTAAAGTTGCCATAAAA 58.849 36.000 14.54 0.00 41.51 1.52
6737 6854 5.241064 TGGCGTAAACTAAAGTTGCCATAAA 59.759 36.000 16.99 0.76 44.46 1.40
6738 6855 4.760715 TGGCGTAAACTAAAGTTGCCATAA 59.239 37.500 16.99 1.04 44.46 1.90
6739 6856 4.325119 TGGCGTAAACTAAAGTTGCCATA 58.675 39.130 16.99 1.60 44.46 2.74
6740 6857 3.150767 TGGCGTAAACTAAAGTTGCCAT 58.849 40.909 16.99 0.00 44.46 4.40
6741 6858 2.573369 TGGCGTAAACTAAAGTTGCCA 58.427 42.857 16.99 16.99 45.99 4.92
6742 6859 3.498082 CATGGCGTAAACTAAAGTTGCC 58.502 45.455 13.18 13.18 41.94 4.52
6743 6860 3.498082 CCATGGCGTAAACTAAAGTTGC 58.502 45.455 0.00 0.00 38.44 4.17
6744 6861 3.672241 GCCCATGGCGTAAACTAAAGTTG 60.672 47.826 6.09 0.00 39.62 3.16
6745 6862 2.490509 GCCCATGGCGTAAACTAAAGTT 59.509 45.455 6.09 0.00 39.62 2.66
6746 6863 2.089201 GCCCATGGCGTAAACTAAAGT 58.911 47.619 6.09 0.00 39.62 2.66
6747 6864 2.844122 GCCCATGGCGTAAACTAAAG 57.156 50.000 6.09 0.00 39.62 1.85
6759 6876 1.624813 AGGTTGTGATTTTGCCCATGG 59.375 47.619 4.14 4.14 0.00 3.66
6760 6877 3.244146 TGAAGGTTGTGATTTTGCCCATG 60.244 43.478 0.00 0.00 0.00 3.66
6761 6878 2.971330 TGAAGGTTGTGATTTTGCCCAT 59.029 40.909 0.00 0.00 0.00 4.00
6762 6879 2.364970 CTGAAGGTTGTGATTTTGCCCA 59.635 45.455 0.00 0.00 0.00 5.36
6763 6880 2.627699 TCTGAAGGTTGTGATTTTGCCC 59.372 45.455 0.00 0.00 0.00 5.36
6764 6881 4.320608 TTCTGAAGGTTGTGATTTTGCC 57.679 40.909 0.00 0.00 0.00 4.52
6765 6882 6.849588 AAATTCTGAAGGTTGTGATTTTGC 57.150 33.333 0.00 0.00 0.00 3.68
6772 6889 9.289303 CGGAAATTATAAATTCTGAAGGTTGTG 57.711 33.333 14.54 0.00 34.52 3.33
6773 6890 9.020731 ACGGAAATTATAAATTCTGAAGGTTGT 57.979 29.630 23.13 2.34 35.84 3.32
6776 6893 9.901172 AGTACGGAAATTATAAATTCTGAAGGT 57.099 29.630 23.13 8.12 35.84 3.50
6788 6905 9.533253 GGTTGCTTACTTAGTACGGAAATTATA 57.467 33.333 4.59 0.00 0.00 0.98
6789 6906 8.042515 TGGTTGCTTACTTAGTACGGAAATTAT 58.957 33.333 4.59 0.00 0.00 1.28
6790 6907 7.331687 GTGGTTGCTTACTTAGTACGGAAATTA 59.668 37.037 4.59 0.00 0.00 1.40
6791 6908 6.148315 GTGGTTGCTTACTTAGTACGGAAATT 59.852 38.462 4.59 0.00 0.00 1.82
6792 6909 5.640783 GTGGTTGCTTACTTAGTACGGAAAT 59.359 40.000 4.59 0.00 0.00 2.17
6793 6910 4.990426 GTGGTTGCTTACTTAGTACGGAAA 59.010 41.667 4.59 0.00 0.00 3.13
6794 6911 4.559153 GTGGTTGCTTACTTAGTACGGAA 58.441 43.478 0.00 0.00 0.00 4.30
6795 6912 3.056607 GGTGGTTGCTTACTTAGTACGGA 60.057 47.826 0.00 0.00 0.00 4.69
6796 6913 3.256558 GGTGGTTGCTTACTTAGTACGG 58.743 50.000 0.00 0.00 0.00 4.02
6797 6914 3.916761 TGGTGGTTGCTTACTTAGTACG 58.083 45.455 0.00 0.00 0.00 3.67
6798 6915 5.243207 ACATGGTGGTTGCTTACTTAGTAC 58.757 41.667 0.00 0.00 0.00 2.73
6799 6916 5.492855 ACATGGTGGTTGCTTACTTAGTA 57.507 39.130 0.00 0.00 0.00 1.82
6800 6917 4.367039 ACATGGTGGTTGCTTACTTAGT 57.633 40.909 0.00 0.00 0.00 2.24
6801 6918 4.142902 CGAACATGGTGGTTGCTTACTTAG 60.143 45.833 0.00 0.00 0.00 2.18
6802 6919 3.749088 CGAACATGGTGGTTGCTTACTTA 59.251 43.478 0.00 0.00 0.00 2.24
6803 6920 2.552315 CGAACATGGTGGTTGCTTACTT 59.448 45.455 0.00 0.00 0.00 2.24
6804 6921 2.151202 CGAACATGGTGGTTGCTTACT 58.849 47.619 0.00 0.00 0.00 2.24
6805 6922 1.877443 ACGAACATGGTGGTTGCTTAC 59.123 47.619 0.00 0.00 0.00 2.34
6806 6923 2.264005 ACGAACATGGTGGTTGCTTA 57.736 45.000 0.00 0.00 0.00 3.09
6807 6924 1.877443 GTACGAACATGGTGGTTGCTT 59.123 47.619 2.93 0.00 0.00 3.91
6808 6925 1.202710 TGTACGAACATGGTGGTTGCT 60.203 47.619 2.93 0.00 0.00 3.91
6809 6926 1.231221 TGTACGAACATGGTGGTTGC 58.769 50.000 2.93 0.00 0.00 4.17
6810 6927 5.614923 TTTATGTACGAACATGGTGGTTG 57.385 39.130 2.93 0.00 45.99 3.77
6811 6928 5.998981 TCTTTTATGTACGAACATGGTGGTT 59.001 36.000 2.93 0.00 45.99 3.67
6812 6929 5.410439 GTCTTTTATGTACGAACATGGTGGT 59.590 40.000 3.21 3.21 45.99 4.16
6813 6930 5.445407 CGTCTTTTATGTACGAACATGGTGG 60.445 44.000 0.00 0.00 45.99 4.61
6814 6931 5.445407 CCGTCTTTTATGTACGAACATGGTG 60.445 44.000 0.00 0.00 45.99 4.17
6815 6932 4.628333 CCGTCTTTTATGTACGAACATGGT 59.372 41.667 0.00 0.00 45.99 3.55
6816 6933 4.033587 CCCGTCTTTTATGTACGAACATGG 59.966 45.833 0.00 0.00 45.99 3.66
6817 6934 4.865925 TCCCGTCTTTTATGTACGAACATG 59.134 41.667 1.34 0.00 45.99 3.21
6819 6936 4.517952 TCCCGTCTTTTATGTACGAACA 57.482 40.909 0.00 0.00 38.89 3.18
6820 6937 4.925646 ACTTCCCGTCTTTTATGTACGAAC 59.074 41.667 0.00 0.00 38.89 3.95
6821 6938 4.925054 CACTTCCCGTCTTTTATGTACGAA 59.075 41.667 0.00 0.00 38.89 3.85
6822 6939 4.487948 CACTTCCCGTCTTTTATGTACGA 58.512 43.478 0.00 0.00 38.89 3.43
6823 6940 3.061697 GCACTTCCCGTCTTTTATGTACG 59.938 47.826 0.00 0.00 36.42 3.67
6824 6941 3.998341 TGCACTTCCCGTCTTTTATGTAC 59.002 43.478 0.00 0.00 0.00 2.90
6825 6942 4.274602 TGCACTTCCCGTCTTTTATGTA 57.725 40.909 0.00 0.00 0.00 2.29
6826 6943 3.134574 TGCACTTCCCGTCTTTTATGT 57.865 42.857 0.00 0.00 0.00 2.29
6827 6944 3.440173 ACATGCACTTCCCGTCTTTTATG 59.560 43.478 0.00 0.00 0.00 1.90
6828 6945 3.686016 ACATGCACTTCCCGTCTTTTAT 58.314 40.909 0.00 0.00 0.00 1.40
6829 6946 3.071479 GACATGCACTTCCCGTCTTTTA 58.929 45.455 0.00 0.00 0.00 1.52
6830 6947 1.880027 GACATGCACTTCCCGTCTTTT 59.120 47.619 0.00 0.00 0.00 2.27
6831 6948 1.523758 GACATGCACTTCCCGTCTTT 58.476 50.000 0.00 0.00 0.00 2.52
6832 6949 0.321653 GGACATGCACTTCCCGTCTT 60.322 55.000 4.30 0.00 0.00 3.01
6833 6950 1.296715 GGACATGCACTTCCCGTCT 59.703 57.895 4.30 0.00 0.00 4.18
6834 6951 0.605319 TTGGACATGCACTTCCCGTC 60.605 55.000 12.00 2.19 0.00 4.79
6835 6952 0.606401 CTTGGACATGCACTTCCCGT 60.606 55.000 12.00 0.00 0.00 5.28
6836 6953 0.321564 TCTTGGACATGCACTTCCCG 60.322 55.000 12.00 4.72 0.00 5.14
6837 6954 1.909700 TTCTTGGACATGCACTTCCC 58.090 50.000 12.00 1.72 0.00 3.97
6838 6955 4.320608 TTTTTCTTGGACATGCACTTCC 57.679 40.909 8.28 8.28 0.00 3.46
6839 6956 7.945033 TTTATTTTTCTTGGACATGCACTTC 57.055 32.000 0.00 0.00 0.00 3.01
6840 6957 8.907222 ATTTTATTTTTCTTGGACATGCACTT 57.093 26.923 0.00 0.00 0.00 3.16
6841 6958 9.995003 TTATTTTATTTTTCTTGGACATGCACT 57.005 25.926 0.00 0.00 0.00 4.40
6855 6972 9.226606 GCCCAGCTAACCTTTTATTTTATTTTT 57.773 29.630 0.00 0.00 0.00 1.94
6856 6973 8.379331 TGCCCAGCTAACCTTTTATTTTATTTT 58.621 29.630 0.00 0.00 0.00 1.82
6857 6974 7.822334 GTGCCCAGCTAACCTTTTATTTTATTT 59.178 33.333 0.00 0.00 0.00 1.40
6858 6975 7.327975 GTGCCCAGCTAACCTTTTATTTTATT 58.672 34.615 0.00 0.00 0.00 1.40
6859 6976 6.127168 GGTGCCCAGCTAACCTTTTATTTTAT 60.127 38.462 0.00 0.00 0.00 1.40
6860 6977 5.186215 GGTGCCCAGCTAACCTTTTATTTTA 59.814 40.000 0.00 0.00 0.00 1.52
6861 6978 4.020573 GGTGCCCAGCTAACCTTTTATTTT 60.021 41.667 0.00 0.00 0.00 1.82
6862 6979 3.513912 GGTGCCCAGCTAACCTTTTATTT 59.486 43.478 0.00 0.00 0.00 1.40
6863 6980 3.096852 GGTGCCCAGCTAACCTTTTATT 58.903 45.455 0.00 0.00 0.00 1.40
6864 6981 2.042433 TGGTGCCCAGCTAACCTTTTAT 59.958 45.455 8.13 0.00 34.90 1.40
6865 6982 1.425831 TGGTGCCCAGCTAACCTTTTA 59.574 47.619 8.13 0.00 34.90 1.52
6866 6983 0.187361 TGGTGCCCAGCTAACCTTTT 59.813 50.000 8.13 0.00 34.90 2.27
6867 6984 0.187361 TTGGTGCCCAGCTAACCTTT 59.813 50.000 8.13 0.00 33.81 3.11
6868 6985 0.539669 GTTGGTGCCCAGCTAACCTT 60.540 55.000 8.13 0.00 33.81 3.50
6869 6986 1.074951 GTTGGTGCCCAGCTAACCT 59.925 57.895 8.13 0.00 33.81 3.50
6870 6987 0.611896 ATGTTGGTGCCCAGCTAACC 60.612 55.000 8.96 0.00 35.72 2.85
6871 6988 2.122783 TATGTTGGTGCCCAGCTAAC 57.877 50.000 8.96 3.31 35.72 2.34
6872 6989 2.823154 GTTTATGTTGGTGCCCAGCTAA 59.177 45.455 8.96 3.99 35.72 3.09
6873 6990 2.224892 TGTTTATGTTGGTGCCCAGCTA 60.225 45.455 8.96 0.00 35.72 3.32
6874 6991 1.256812 GTTTATGTTGGTGCCCAGCT 58.743 50.000 8.96 0.00 35.72 4.24
6875 6992 0.965439 TGTTTATGTTGGTGCCCAGC 59.035 50.000 1.87 1.87 33.81 4.85
6876 6993 1.959985 TGTGTTTATGTTGGTGCCCAG 59.040 47.619 0.00 0.00 33.81 4.45
6877 6994 1.683917 GTGTGTTTATGTTGGTGCCCA 59.316 47.619 0.00 0.00 0.00 5.36
6878 6995 1.000394 GGTGTGTTTATGTTGGTGCCC 60.000 52.381 0.00 0.00 0.00 5.36
6879 6996 1.000394 GGGTGTGTTTATGTTGGTGCC 60.000 52.381 0.00 0.00 0.00 5.01
6880 6997 1.683917 TGGGTGTGTTTATGTTGGTGC 59.316 47.619 0.00 0.00 0.00 5.01
6881 6998 4.392921 TTTGGGTGTGTTTATGTTGGTG 57.607 40.909 0.00 0.00 0.00 4.17
6882 6999 4.682050 GCTTTTGGGTGTGTTTATGTTGGT 60.682 41.667 0.00 0.00 0.00 3.67
6883 7000 3.807071 GCTTTTGGGTGTGTTTATGTTGG 59.193 43.478 0.00 0.00 0.00 3.77
6884 7001 4.437239 TGCTTTTGGGTGTGTTTATGTTG 58.563 39.130 0.00 0.00 0.00 3.33
6885 7002 4.744795 TGCTTTTGGGTGTGTTTATGTT 57.255 36.364 0.00 0.00 0.00 2.71
6886 7003 4.744795 TTGCTTTTGGGTGTGTTTATGT 57.255 36.364 0.00 0.00 0.00 2.29
6887 7004 5.584251 ACTTTTGCTTTTGGGTGTGTTTATG 59.416 36.000 0.00 0.00 0.00 1.90
6888 7005 5.739959 ACTTTTGCTTTTGGGTGTGTTTAT 58.260 33.333 0.00 0.00 0.00 1.40
6889 7006 5.153950 ACTTTTGCTTTTGGGTGTGTTTA 57.846 34.783 0.00 0.00 0.00 2.01
6890 7007 4.014569 ACTTTTGCTTTTGGGTGTGTTT 57.985 36.364 0.00 0.00 0.00 2.83
6891 7008 3.694043 ACTTTTGCTTTTGGGTGTGTT 57.306 38.095 0.00 0.00 0.00 3.32
6892 7009 5.351948 AATACTTTTGCTTTTGGGTGTGT 57.648 34.783 0.00 0.00 0.00 3.72
6893 7010 6.744112 TCTAATACTTTTGCTTTTGGGTGTG 58.256 36.000 0.00 0.00 0.00 3.82
6894 7011 6.969993 TCTAATACTTTTGCTTTTGGGTGT 57.030 33.333 0.00 0.00 0.00 4.16
6895 7012 9.520204 CATATCTAATACTTTTGCTTTTGGGTG 57.480 33.333 0.00 0.00 0.00 4.61
6896 7013 8.197439 GCATATCTAATACTTTTGCTTTTGGGT 58.803 33.333 0.00 0.00 0.00 4.51
6897 7014 7.653311 GGCATATCTAATACTTTTGCTTTTGGG 59.347 37.037 0.00 0.00 0.00 4.12
6898 7015 8.416329 AGGCATATCTAATACTTTTGCTTTTGG 58.584 33.333 0.00 0.00 0.00 3.28
6899 7016 9.807649 AAGGCATATCTAATACTTTTGCTTTTG 57.192 29.630 0.00 0.00 0.00 2.44
6914 7031 9.998106 GGAAGTTTTGTATCTAAGGCATATCTA 57.002 33.333 0.00 0.00 0.00 1.98
6915 7032 7.657761 CGGAAGTTTTGTATCTAAGGCATATCT 59.342 37.037 0.00 0.00 0.00 1.98
6916 7033 7.656137 TCGGAAGTTTTGTATCTAAGGCATATC 59.344 37.037 0.00 0.00 0.00 1.63
6917 7034 7.506114 TCGGAAGTTTTGTATCTAAGGCATAT 58.494 34.615 0.00 0.00 0.00 1.78
6918 7035 6.880484 TCGGAAGTTTTGTATCTAAGGCATA 58.120 36.000 0.00 0.00 0.00 3.14
6919 7036 5.741011 TCGGAAGTTTTGTATCTAAGGCAT 58.259 37.500 0.00 0.00 0.00 4.40
6920 7037 5.046878 TCTCGGAAGTTTTGTATCTAAGGCA 60.047 40.000 0.00 0.00 0.00 4.75
6921 7038 5.416947 TCTCGGAAGTTTTGTATCTAAGGC 58.583 41.667 0.00 0.00 0.00 4.35
6922 7039 5.520649 GCTCTCGGAAGTTTTGTATCTAAGG 59.479 44.000 0.00 0.00 0.00 2.69
6923 7040 5.520649 GGCTCTCGGAAGTTTTGTATCTAAG 59.479 44.000 0.00 0.00 0.00 2.18
6924 7041 5.046878 TGGCTCTCGGAAGTTTTGTATCTAA 60.047 40.000 0.00 0.00 0.00 2.10
6925 7042 4.464951 TGGCTCTCGGAAGTTTTGTATCTA 59.535 41.667 0.00 0.00 0.00 1.98
6926 7043 3.260884 TGGCTCTCGGAAGTTTTGTATCT 59.739 43.478 0.00 0.00 0.00 1.98
6927 7044 3.596214 TGGCTCTCGGAAGTTTTGTATC 58.404 45.455 0.00 0.00 0.00 2.24
6928 7045 3.695830 TGGCTCTCGGAAGTTTTGTAT 57.304 42.857 0.00 0.00 0.00 2.29
6929 7046 3.478857 TTGGCTCTCGGAAGTTTTGTA 57.521 42.857 0.00 0.00 0.00 2.41
6930 7047 2.341846 TTGGCTCTCGGAAGTTTTGT 57.658 45.000 0.00 0.00 0.00 2.83
6931 7048 3.315191 TCTTTTGGCTCTCGGAAGTTTTG 59.685 43.478 0.00 0.00 0.00 2.44
6932 7049 3.551846 TCTTTTGGCTCTCGGAAGTTTT 58.448 40.909 0.00 0.00 0.00 2.43
6933 7050 3.208747 TCTTTTGGCTCTCGGAAGTTT 57.791 42.857 0.00 0.00 0.00 2.66
6934 7051 2.930826 TCTTTTGGCTCTCGGAAGTT 57.069 45.000 0.00 0.00 0.00 2.66
6935 7052 2.569404 AGATCTTTTGGCTCTCGGAAGT 59.431 45.455 0.00 0.00 0.00 3.01
6936 7053 2.935201 CAGATCTTTTGGCTCTCGGAAG 59.065 50.000 0.00 0.00 0.00 3.46
6937 7054 2.936993 GCAGATCTTTTGGCTCTCGGAA 60.937 50.000 0.00 0.00 0.00 4.30
6938 7055 1.406069 GCAGATCTTTTGGCTCTCGGA 60.406 52.381 0.00 0.00 0.00 4.55
6939 7056 1.012841 GCAGATCTTTTGGCTCTCGG 58.987 55.000 0.00 0.00 0.00 4.63
6940 7057 1.664659 CTGCAGATCTTTTGGCTCTCG 59.335 52.381 8.42 0.00 0.00 4.04
6941 7058 2.015587 CCTGCAGATCTTTTGGCTCTC 58.984 52.381 17.39 0.00 0.00 3.20
6942 7059 1.340795 CCCTGCAGATCTTTTGGCTCT 60.341 52.381 17.39 0.00 0.00 4.09
6943 7060 1.101331 CCCTGCAGATCTTTTGGCTC 58.899 55.000 17.39 0.00 0.00 4.70
6944 7061 0.407139 ACCCTGCAGATCTTTTGGCT 59.593 50.000 17.39 0.00 0.00 4.75
6945 7062 2.019984 CTACCCTGCAGATCTTTTGGC 58.980 52.381 17.39 0.00 0.00 4.52
6946 7063 3.539604 CTCTACCCTGCAGATCTTTTGG 58.460 50.000 17.39 8.42 0.00 3.28
6947 7064 3.539604 CCTCTACCCTGCAGATCTTTTG 58.460 50.000 17.39 0.00 0.00 2.44
6948 7065 2.507471 CCCTCTACCCTGCAGATCTTTT 59.493 50.000 17.39 0.00 0.00 2.27
6949 7066 2.122768 CCCTCTACCCTGCAGATCTTT 58.877 52.381 17.39 0.00 0.00 2.52
6950 7067 1.292242 TCCCTCTACCCTGCAGATCTT 59.708 52.381 17.39 0.00 0.00 2.40
6951 7068 0.937441 TCCCTCTACCCTGCAGATCT 59.063 55.000 17.39 0.00 0.00 2.75
6952 7069 1.133325 TCTCCCTCTACCCTGCAGATC 60.133 57.143 17.39 0.00 0.00 2.75
6953 7070 0.937441 TCTCCCTCTACCCTGCAGAT 59.063 55.000 17.39 5.38 0.00 2.90
6954 7071 0.937441 ATCTCCCTCTACCCTGCAGA 59.063 55.000 17.39 0.00 0.00 4.26
6955 7072 1.337118 GATCTCCCTCTACCCTGCAG 58.663 60.000 6.78 6.78 0.00 4.41
6956 7073 0.636647 TGATCTCCCTCTACCCTGCA 59.363 55.000 0.00 0.00 0.00 4.41
6957 7074 1.899142 GATGATCTCCCTCTACCCTGC 59.101 57.143 0.00 0.00 0.00 4.85
6958 7075 3.251016 TGATGATCTCCCTCTACCCTG 57.749 52.381 0.00 0.00 0.00 4.45
6959 7076 4.140591 TGATTGATGATCTCCCTCTACCCT 60.141 45.833 0.00 0.00 35.69 4.34
6960 7077 4.163427 TGATTGATGATCTCCCTCTACCC 58.837 47.826 0.00 0.00 35.69 3.69
6961 7078 5.732633 CATGATTGATGATCTCCCTCTACC 58.267 45.833 0.00 0.00 35.69 3.18
6962 7079 5.177326 GCATGATTGATGATCTCCCTCTAC 58.823 45.833 0.00 0.00 35.69 2.59
6963 7080 4.224594 GGCATGATTGATGATCTCCCTCTA 59.775 45.833 0.00 0.00 35.69 2.43
6964 7081 3.009253 GGCATGATTGATGATCTCCCTCT 59.991 47.826 0.00 0.00 35.69 3.69
6965 7082 3.244805 TGGCATGATTGATGATCTCCCTC 60.245 47.826 0.00 0.00 35.69 4.30
6966 7083 2.714793 TGGCATGATTGATGATCTCCCT 59.285 45.455 0.00 0.00 35.69 4.20
6967 7084 2.818432 GTGGCATGATTGATGATCTCCC 59.182 50.000 0.00 0.00 35.69 4.30
6968 7085 2.818432 GGTGGCATGATTGATGATCTCC 59.182 50.000 0.00 0.00 35.69 3.71
6969 7086 3.752665 AGGTGGCATGATTGATGATCTC 58.247 45.455 0.00 0.00 35.69 2.75
6970 7087 3.878237 AGGTGGCATGATTGATGATCT 57.122 42.857 0.00 0.00 35.69 2.75
6971 7088 3.439476 GCTAGGTGGCATGATTGATGATC 59.561 47.826 0.00 0.00 33.31 2.92
6972 7089 3.418995 GCTAGGTGGCATGATTGATGAT 58.581 45.455 0.00 0.00 33.31 2.45
6973 7090 2.487805 GGCTAGGTGGCATGATTGATGA 60.488 50.000 0.00 0.00 41.37 2.92
6974 7091 1.884579 GGCTAGGTGGCATGATTGATG 59.115 52.381 0.00 0.00 41.37 3.07
6975 7092 1.544093 CGGCTAGGTGGCATGATTGAT 60.544 52.381 0.00 0.00 41.89 2.57
6976 7093 0.179048 CGGCTAGGTGGCATGATTGA 60.179 55.000 0.00 0.00 41.89 2.57
6977 7094 0.179048 TCGGCTAGGTGGCATGATTG 60.179 55.000 0.00 0.00 41.89 2.67
6978 7095 0.107456 CTCGGCTAGGTGGCATGATT 59.893 55.000 0.00 0.00 41.89 2.57
6979 7096 1.750930 CTCGGCTAGGTGGCATGAT 59.249 57.895 0.00 0.00 41.89 2.45
6980 7097 2.434843 CCTCGGCTAGGTGGCATGA 61.435 63.158 0.00 0.00 40.94 3.07
6981 7098 2.109799 CCTCGGCTAGGTGGCATG 59.890 66.667 0.00 0.00 40.94 4.06
6989 7106 0.107945 AGCTTTCTTGCCTCGGCTAG 60.108 55.000 12.29 12.29 43.40 3.42
6990 7107 1.134788 GTAGCTTTCTTGCCTCGGCTA 60.135 52.381 9.65 0.25 42.51 3.93
6991 7108 0.391793 GTAGCTTTCTTGCCTCGGCT 60.392 55.000 9.65 0.00 42.51 5.52
6992 7109 0.673644 TGTAGCTTTCTTGCCTCGGC 60.674 55.000 0.00 0.00 42.35 5.54
6993 7110 1.808411 TTGTAGCTTTCTTGCCTCGG 58.192 50.000 0.00 0.00 0.00 4.63


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.