Multiple sequence alignment - TraesCS5D01G044800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G044800 chr5D 100.000 3437 0 0 1 3437 44138985 44135549 0.000000e+00 6348.0
1 TraesCS5D01G044800 chr5D 81.084 1052 157 26 1328 2355 454099609 454098576 0.000000e+00 802.0
2 TraesCS5D01G044800 chr5D 98.760 242 3 0 317 558 44153272 44153031 6.810000e-117 431.0
3 TraesCS5D01G044800 chr5D 91.429 70 4 2 1274 1342 402723558 402723626 1.020000e-15 95.3
4 TraesCS5D01G044800 chr5B 92.499 2413 106 23 411 2760 42533713 42531313 0.000000e+00 3384.0
5 TraesCS5D01G044800 chr5B 81.007 1053 156 26 1328 2355 554809023 554807990 0.000000e+00 797.0
6 TraesCS5D01G044800 chr5B 95.070 284 13 1 2831 3113 42531308 42531025 2.430000e-121 446.0
7 TraesCS5D01G044800 chr5B 87.970 266 14 6 3175 3437 42530801 42530551 7.210000e-77 298.0
8 TraesCS5D01G044800 chr5A 90.963 2346 125 43 409 2716 34261717 34264013 0.000000e+00 3077.0
9 TraesCS5D01G044800 chr5A 89.457 939 62 25 1835 2758 363860416 363861332 0.000000e+00 1151.0
10 TraesCS5D01G044800 chr5A 80.392 1122 161 34 1259 2355 573086688 573085601 0.000000e+00 798.0
11 TraesCS5D01G044800 chr5A 92.544 228 17 0 2842 3069 34264040 34264267 9.200000e-86 327.0
12 TraesCS5D01G044800 chr5A 94.944 178 8 1 1162 1339 363859319 363859495 9.390000e-71 278.0
13 TraesCS5D01G044800 chr5A 85.537 242 13 10 3197 3437 34264509 34264729 2.060000e-57 233.0
14 TraesCS5D01G044800 chr5A 91.772 158 7 5 2817 2974 363861332 363861483 7.470000e-52 215.0
15 TraesCS5D01G044800 chr3B 91.401 942 59 12 1835 2758 559103043 559102106 0.000000e+00 1271.0
16 TraesCS5D01G044800 chr3B 94.940 415 20 1 1 414 291825075 291825489 0.000000e+00 649.0
17 TraesCS5D01G044800 chr3B 94.527 402 13 6 1352 1752 559103429 559103036 2.270000e-171 612.0
18 TraesCS5D01G044800 chr3B 91.071 168 10 4 2817 2984 559102106 559101944 4.460000e-54 222.0
19 TraesCS5D01G044800 chr1B 91.469 926 55 8 1835 2758 343969528 343970431 0.000000e+00 1251.0
20 TraesCS5D01G044800 chr1B 89.244 939 64 25 1835 2758 605938708 605939624 0.000000e+00 1140.0
21 TraesCS5D01G044800 chr1B 94.712 416 21 1 1 415 17637982 17637567 0.000000e+00 645.0
22 TraesCS5D01G044800 chr1B 96.918 292 9 0 1449 1740 605938405 605938696 1.110000e-134 490.0
23 TraesCS5D01G044800 chr1B 94.944 178 8 1 1162 1339 605937573 605937749 9.390000e-71 278.0
24 TraesCS5D01G044800 chr1B 91.071 168 10 4 2817 2984 343970431 343970593 4.460000e-54 222.0
25 TraesCS5D01G044800 chr1B 91.139 158 9 4 2817 2974 605939624 605939776 3.480000e-50 209.0
26 TraesCS5D01G044800 chr4B 89.350 939 63 25 1835 2758 389754254 389753338 0.000000e+00 1146.0
27 TraesCS5D01G044800 chr4B 96.575 292 10 0 1449 1740 389754557 389754266 5.160000e-133 484.0
28 TraesCS5D01G044800 chr4B 94.382 178 9 1 1162 1339 389755389 389755213 4.370000e-69 272.0
29 TraesCS5D01G044800 chr4B 92.405 158 7 4 2817 2974 389753338 389753186 1.610000e-53 220.0
30 TraesCS5D01G044800 chr7B 89.137 939 65 25 1835 2758 60628888 60627972 0.000000e+00 1134.0
31 TraesCS5D01G044800 chr7B 94.952 416 20 1 1 415 34423870 34424285 0.000000e+00 651.0
32 TraesCS5D01G044800 chr7B 96.918 292 9 0 1449 1740 60629191 60628900 1.110000e-134 490.0
33 TraesCS5D01G044800 chr7B 94.382 178 9 1 1162 1339 60630023 60629847 4.370000e-69 272.0
34 TraesCS5D01G044800 chr7B 92.405 158 7 4 2817 2974 60627972 60627820 1.610000e-53 220.0
35 TraesCS5D01G044800 chr7B 96.429 56 2 0 1283 1338 458795895 458795950 3.650000e-15 93.5
36 TraesCS5D01G044800 chr3D 96.725 397 12 1 1 396 509241840 509241444 0.000000e+00 660.0
37 TraesCS5D01G044800 chr2B 95.400 413 18 1 1 412 683380434 683380022 0.000000e+00 656.0
38 TraesCS5D01G044800 chr6D 94.940 415 20 1 1 414 265999841 266000255 0.000000e+00 649.0
39 TraesCS5D01G044800 chr4D 94.737 418 21 1 1 417 322666019 322665602 0.000000e+00 649.0
40 TraesCS5D01G044800 chr7A 94.484 417 22 1 1 416 162518992 162519408 2.890000e-180 641.0
41 TraesCS5D01G044800 chr1D 94.673 413 21 1 1 412 486682915 486683327 1.040000e-179 640.0
42 TraesCS5D01G044800 chr6B 88.296 487 38 13 2275 2758 623987428 623986958 1.790000e-157 566.0
43 TraesCS5D01G044800 chr6B 94.944 178 8 1 1162 1339 623994409 623994233 9.390000e-71 278.0
44 TraesCS5D01G044800 chr6B 92.405 158 7 4 2817 2974 623986958 623986806 1.610000e-53 220.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G044800 chr5D 44135549 44138985 3436 True 6348.000000 6348 100.000000 1 3437 1 chr5D.!!$R1 3436
1 TraesCS5D01G044800 chr5D 454098576 454099609 1033 True 802.000000 802 81.084000 1328 2355 1 chr5D.!!$R3 1027
2 TraesCS5D01G044800 chr5B 42530551 42533713 3162 True 1376.000000 3384 91.846333 411 3437 3 chr5B.!!$R2 3026
3 TraesCS5D01G044800 chr5B 554807990 554809023 1033 True 797.000000 797 81.007000 1328 2355 1 chr5B.!!$R1 1027
4 TraesCS5D01G044800 chr5A 34261717 34264729 3012 False 1212.333333 3077 89.681333 409 3437 3 chr5A.!!$F1 3028
5 TraesCS5D01G044800 chr5A 573085601 573086688 1087 True 798.000000 798 80.392000 1259 2355 1 chr5A.!!$R1 1096
6 TraesCS5D01G044800 chr5A 363859319 363861483 2164 False 548.000000 1151 92.057667 1162 2974 3 chr5A.!!$F2 1812
7 TraesCS5D01G044800 chr3B 559101944 559103429 1485 True 701.666667 1271 92.333000 1352 2984 3 chr3B.!!$R1 1632
8 TraesCS5D01G044800 chr1B 343969528 343970593 1065 False 736.500000 1251 91.270000 1835 2984 2 chr1B.!!$F1 1149
9 TraesCS5D01G044800 chr1B 605937573 605939776 2203 False 529.250000 1140 93.061250 1162 2974 4 chr1B.!!$F2 1812
10 TraesCS5D01G044800 chr4B 389753186 389755389 2203 True 530.500000 1146 93.178000 1162 2974 4 chr4B.!!$R1 1812
11 TraesCS5D01G044800 chr7B 60627820 60630023 2203 True 529.000000 1134 93.210500 1162 2974 4 chr7B.!!$R1 1812
12 TraesCS5D01G044800 chr6B 623986806 623987428 622 True 393.000000 566 90.350500 2275 2974 2 chr6B.!!$R2 699

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
243 244 0.031616 AAAGGTTGGGGTTGAGGCAA 60.032 50.0 0.0 0.0 0.00 4.52 F
244 245 0.031616 AAGGTTGGGGTTGAGGCAAA 60.032 50.0 0.0 0.0 0.00 3.68 F
245 246 0.469892 AGGTTGGGGTTGAGGCAAAG 60.470 55.0 0.0 0.0 0.00 2.77 F
327 328 0.031616 TGCCCCTGTTTTTCAACCCT 60.032 50.0 0.0 0.0 31.02 4.34 F
1907 2600 0.459585 TGCTTCCCGATACGCTTCAC 60.460 55.0 0.0 0.0 0.00 3.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1752 2380 0.796870 CGCGTATCAGCACGTTCTCA 60.797 55.000 0.00 0.00 43.79 3.27 R
1884 2577 1.115930 AGCGTATCGGGAAGCAGGAT 61.116 55.000 0.00 0.00 0.00 3.24 R
1977 2678 2.427905 CCGACGAACGAGCACGAA 60.428 61.111 11.40 0.00 45.77 3.85 R
2400 3111 4.287781 TTCGTGTCCGGCTTGCGA 62.288 61.111 0.00 0.82 33.95 5.10 R
3154 4040 0.166814 GCGGAAACAGCATCTGTGTC 59.833 55.000 8.29 8.29 44.62 3.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.668141 TGGCCCATGATGTATCTTTGT 57.332 42.857 0.00 0.00 0.00 2.83
22 23 3.979911 TGGCCCATGATGTATCTTTGTT 58.020 40.909 0.00 0.00 0.00 2.83
23 24 4.352009 TGGCCCATGATGTATCTTTGTTT 58.648 39.130 0.00 0.00 0.00 2.83
24 25 4.776837 TGGCCCATGATGTATCTTTGTTTT 59.223 37.500 0.00 0.00 0.00 2.43
25 26 5.954752 TGGCCCATGATGTATCTTTGTTTTA 59.045 36.000 0.00 0.00 0.00 1.52
26 27 6.127479 TGGCCCATGATGTATCTTTGTTTTAC 60.127 38.462 0.00 0.00 0.00 2.01
27 28 6.096846 GGCCCATGATGTATCTTTGTTTTACT 59.903 38.462 0.00 0.00 0.00 2.24
28 29 7.363793 GGCCCATGATGTATCTTTGTTTTACTT 60.364 37.037 0.00 0.00 0.00 2.24
29 30 8.034804 GCCCATGATGTATCTTTGTTTTACTTT 58.965 33.333 0.00 0.00 0.00 2.66
30 31 9.927668 CCCATGATGTATCTTTGTTTTACTTTT 57.072 29.630 0.00 0.00 0.00 2.27
51 52 9.667107 ACTTTTCTATGTCCTATTTGATTCGAA 57.333 29.630 0.00 0.00 0.00 3.71
52 53 9.922305 CTTTTCTATGTCCTATTTGATTCGAAC 57.078 33.333 0.00 0.00 0.00 3.95
53 54 9.443323 TTTTCTATGTCCTATTTGATTCGAACA 57.557 29.630 0.00 0.00 0.00 3.18
54 55 9.443323 TTTCTATGTCCTATTTGATTCGAACAA 57.557 29.630 0.00 4.51 0.00 2.83
55 56 9.613428 TTCTATGTCCTATTTGATTCGAACAAT 57.387 29.630 0.00 2.11 0.00 2.71
56 57 9.613428 TCTATGTCCTATTTGATTCGAACAATT 57.387 29.630 0.00 6.56 0.00 2.32
69 70 9.853555 TGATTCGAACAATTATTGTAATTTGCT 57.146 25.926 11.23 0.00 44.59 3.91
71 72 9.853555 ATTCGAACAATTATTGTAATTTGCTCA 57.146 25.926 11.23 0.00 44.59 4.26
72 73 9.684448 TTCGAACAATTATTGTAATTTGCTCAA 57.316 25.926 11.23 0.00 44.59 3.02
73 74 9.684448 TCGAACAATTATTGTAATTTGCTCAAA 57.316 25.926 11.23 0.00 44.59 2.69
74 75 9.726034 CGAACAATTATTGTAATTTGCTCAAAC 57.274 29.630 11.23 0.00 44.59 2.93
82 83 7.840342 TTGTAATTTGCTCAAACATTGTTGT 57.160 28.000 2.13 0.00 37.82 3.32
83 84 8.932945 TTGTAATTTGCTCAAACATTGTTGTA 57.067 26.923 2.13 0.00 34.06 2.41
84 85 8.932945 TGTAATTTGCTCAAACATTGTTGTAA 57.067 26.923 2.13 0.00 34.06 2.41
85 86 9.539825 TGTAATTTGCTCAAACATTGTTGTAAT 57.460 25.926 2.13 0.00 34.06 1.89
92 93 9.755804 TGCTCAAACATTGTTGTAATAATTTGA 57.244 25.926 2.13 0.00 34.06 2.69
114 115 9.579768 TTTGAATGATTATTGTTTTATCCGGTG 57.420 29.630 0.00 0.00 0.00 4.94
115 116 7.711846 TGAATGATTATTGTTTTATCCGGTGG 58.288 34.615 0.00 0.00 0.00 4.61
116 117 7.340743 TGAATGATTATTGTTTTATCCGGTGGT 59.659 33.333 0.00 0.00 0.00 4.16
117 118 6.443934 TGATTATTGTTTTATCCGGTGGTG 57.556 37.500 0.00 0.00 0.00 4.17
118 119 5.946972 TGATTATTGTTTTATCCGGTGGTGT 59.053 36.000 0.00 0.00 0.00 4.16
119 120 7.110810 TGATTATTGTTTTATCCGGTGGTGTA 58.889 34.615 0.00 0.00 0.00 2.90
120 121 7.610692 TGATTATTGTTTTATCCGGTGGTGTAA 59.389 33.333 0.00 0.00 0.00 2.41
121 122 7.941431 TTATTGTTTTATCCGGTGGTGTAAT 57.059 32.000 0.00 0.00 0.00 1.89
122 123 9.629878 ATTATTGTTTTATCCGGTGGTGTAATA 57.370 29.630 0.00 0.00 0.00 0.98
123 124 7.941431 ATTGTTTTATCCGGTGGTGTAATAA 57.059 32.000 0.00 0.00 0.00 1.40
124 125 7.941431 TTGTTTTATCCGGTGGTGTAATAAT 57.059 32.000 0.00 0.00 0.00 1.28
125 126 9.629878 ATTGTTTTATCCGGTGGTGTAATAATA 57.370 29.630 0.00 0.00 0.00 0.98
126 127 9.458727 TTGTTTTATCCGGTGGTGTAATAATAA 57.541 29.630 0.00 0.00 0.00 1.40
127 128 8.891720 TGTTTTATCCGGTGGTGTAATAATAAC 58.108 33.333 0.00 5.06 0.00 1.89
128 129 9.112725 GTTTTATCCGGTGGTGTAATAATAACT 57.887 33.333 0.00 0.00 0.00 2.24
130 131 9.985730 TTTATCCGGTGGTGTAATAATAACTAG 57.014 33.333 0.00 0.00 0.00 2.57
131 132 7.844493 ATCCGGTGGTGTAATAATAACTAGA 57.156 36.000 0.00 0.00 0.00 2.43
132 133 7.658525 TCCGGTGGTGTAATAATAACTAGAA 57.341 36.000 0.00 0.00 0.00 2.10
133 134 8.253867 TCCGGTGGTGTAATAATAACTAGAAT 57.746 34.615 0.00 0.00 0.00 2.40
134 135 8.145767 TCCGGTGGTGTAATAATAACTAGAATG 58.854 37.037 0.00 0.00 0.00 2.67
135 136 8.145767 CCGGTGGTGTAATAATAACTAGAATGA 58.854 37.037 0.00 0.00 0.00 2.57
136 137 9.706691 CGGTGGTGTAATAATAACTAGAATGAT 57.293 33.333 0.00 0.00 0.00 2.45
164 165 9.947433 ATTGTTTTATGTCAAATGTGATGGAAT 57.053 25.926 0.00 0.00 35.80 3.01
165 166 9.775854 TTGTTTTATGTCAAATGTGATGGAATT 57.224 25.926 0.00 0.00 35.80 2.17
166 167 9.775854 TGTTTTATGTCAAATGTGATGGAATTT 57.224 25.926 0.00 0.00 35.80 1.82
169 170 9.566530 TTTATGTCAAATGTGATGGAATTTACG 57.433 29.630 0.00 0.00 35.80 3.18
170 171 6.809630 TGTCAAATGTGATGGAATTTACGA 57.190 33.333 0.00 0.00 35.80 3.43
171 172 7.389803 TGTCAAATGTGATGGAATTTACGAT 57.610 32.000 0.00 0.00 35.80 3.73
172 173 8.499403 TGTCAAATGTGATGGAATTTACGATA 57.501 30.769 0.00 0.00 35.80 2.92
173 174 9.119418 TGTCAAATGTGATGGAATTTACGATAT 57.881 29.630 0.00 0.00 35.80 1.63
174 175 9.385902 GTCAAATGTGATGGAATTTACGATATG 57.614 33.333 0.00 0.00 35.80 1.78
175 176 9.119418 TCAAATGTGATGGAATTTACGATATGT 57.881 29.630 0.00 0.00 0.00 2.29
176 177 9.385902 CAAATGTGATGGAATTTACGATATGTC 57.614 33.333 0.00 0.00 0.00 3.06
177 178 8.675705 AATGTGATGGAATTTACGATATGTCA 57.324 30.769 0.00 0.00 0.00 3.58
178 179 8.853077 ATGTGATGGAATTTACGATATGTCAT 57.147 30.769 0.00 0.00 0.00 3.06
179 180 9.942850 ATGTGATGGAATTTACGATATGTCATA 57.057 29.630 0.00 0.00 0.00 2.15
180 181 9.942850 TGTGATGGAATTTACGATATGTCATAT 57.057 29.630 4.96 4.96 0.00 1.78
191 192 7.854557 ACGATATGTCATATGATGAAATGGG 57.145 36.000 9.02 0.00 41.69 4.00
192 193 7.623630 ACGATATGTCATATGATGAAATGGGA 58.376 34.615 9.02 0.00 41.69 4.37
193 194 8.270030 ACGATATGTCATATGATGAAATGGGAT 58.730 33.333 9.02 0.00 41.69 3.85
194 195 8.557029 CGATATGTCATATGATGAAATGGGATG 58.443 37.037 9.02 0.00 41.69 3.51
195 196 9.623000 GATATGTCATATGATGAAATGGGATGA 57.377 33.333 9.02 0.00 41.69 2.92
196 197 9.984590 ATATGTCATATGATGAAATGGGATGAA 57.015 29.630 9.02 0.00 41.69 2.57
197 198 8.715190 ATGTCATATGATGAAATGGGATGAAA 57.285 30.769 9.02 0.00 41.69 2.69
198 199 8.715190 TGTCATATGATGAAATGGGATGAAAT 57.285 30.769 9.02 0.00 41.69 2.17
199 200 8.581578 TGTCATATGATGAAATGGGATGAAATG 58.418 33.333 9.02 0.00 41.69 2.32
200 201 8.582437 GTCATATGATGAAATGGGATGAAATGT 58.418 33.333 9.02 0.00 41.69 2.71
201 202 8.581578 TCATATGATGAAATGGGATGAAATGTG 58.418 33.333 0.00 0.00 36.11 3.21
202 203 6.801718 ATGATGAAATGGGATGAAATGTGT 57.198 33.333 0.00 0.00 0.00 3.72
203 204 5.968254 TGATGAAATGGGATGAAATGTGTG 58.032 37.500 0.00 0.00 0.00 3.82
204 205 5.715753 TGATGAAATGGGATGAAATGTGTGA 59.284 36.000 0.00 0.00 0.00 3.58
205 206 6.381707 TGATGAAATGGGATGAAATGTGTGAT 59.618 34.615 0.00 0.00 0.00 3.06
206 207 7.560626 TGATGAAATGGGATGAAATGTGTGATA 59.439 33.333 0.00 0.00 0.00 2.15
207 208 7.901283 TGAAATGGGATGAAATGTGTGATAT 57.099 32.000 0.00 0.00 0.00 1.63
208 209 7.718525 TGAAATGGGATGAAATGTGTGATATG 58.281 34.615 0.00 0.00 0.00 1.78
209 210 7.342541 TGAAATGGGATGAAATGTGTGATATGT 59.657 33.333 0.00 0.00 0.00 2.29
210 211 6.644248 ATGGGATGAAATGTGTGATATGTG 57.356 37.500 0.00 0.00 0.00 3.21
211 212 5.753716 TGGGATGAAATGTGTGATATGTGA 58.246 37.500 0.00 0.00 0.00 3.58
212 213 6.186234 TGGGATGAAATGTGTGATATGTGAA 58.814 36.000 0.00 0.00 0.00 3.18
213 214 6.662663 TGGGATGAAATGTGTGATATGTGAAA 59.337 34.615 0.00 0.00 0.00 2.69
214 215 7.342541 TGGGATGAAATGTGTGATATGTGAAAT 59.657 33.333 0.00 0.00 0.00 2.17
215 216 7.650504 GGGATGAAATGTGTGATATGTGAAATG 59.349 37.037 0.00 0.00 0.00 2.32
216 217 8.407832 GGATGAAATGTGTGATATGTGAAATGA 58.592 33.333 0.00 0.00 0.00 2.57
217 218 9.229784 GATGAAATGTGTGATATGTGAAATGAC 57.770 33.333 0.00 0.00 0.00 3.06
218 219 8.108551 TGAAATGTGTGATATGTGAAATGACA 57.891 30.769 0.00 0.00 0.00 3.58
219 220 8.238631 TGAAATGTGTGATATGTGAAATGACAG 58.761 33.333 0.00 0.00 0.00 3.51
220 221 7.692460 AATGTGTGATATGTGAAATGACAGT 57.308 32.000 0.00 0.00 0.00 3.55
221 222 7.692460 ATGTGTGATATGTGAAATGACAGTT 57.308 32.000 0.00 0.00 0.00 3.16
222 223 7.509141 TGTGTGATATGTGAAATGACAGTTT 57.491 32.000 0.00 0.00 0.00 2.66
223 224 7.939782 TGTGTGATATGTGAAATGACAGTTTT 58.060 30.769 0.00 0.00 0.00 2.43
224 225 9.061435 TGTGTGATATGTGAAATGACAGTTTTA 57.939 29.630 0.00 0.00 0.00 1.52
225 226 9.891828 GTGTGATATGTGAAATGACAGTTTTAA 57.108 29.630 0.00 0.00 0.00 1.52
231 232 8.647143 ATGTGAAATGACAGTTTTAAAGGTTG 57.353 30.769 0.00 0.00 0.00 3.77
232 233 7.038659 TGTGAAATGACAGTTTTAAAGGTTGG 58.961 34.615 0.00 0.00 0.00 3.77
233 234 6.478673 GTGAAATGACAGTTTTAAAGGTTGGG 59.521 38.462 0.00 0.00 0.00 4.12
234 235 5.545063 AATGACAGTTTTAAAGGTTGGGG 57.455 39.130 0.00 0.00 0.00 4.96
235 236 3.983821 TGACAGTTTTAAAGGTTGGGGT 58.016 40.909 0.00 0.00 0.00 4.95
236 237 4.354662 TGACAGTTTTAAAGGTTGGGGTT 58.645 39.130 0.00 0.00 0.00 4.11
237 238 4.160626 TGACAGTTTTAAAGGTTGGGGTTG 59.839 41.667 0.00 0.00 0.00 3.77
238 239 4.354662 ACAGTTTTAAAGGTTGGGGTTGA 58.645 39.130 0.00 0.00 0.00 3.18
239 240 4.404394 ACAGTTTTAAAGGTTGGGGTTGAG 59.596 41.667 0.00 0.00 0.00 3.02
240 241 3.964688 AGTTTTAAAGGTTGGGGTTGAGG 59.035 43.478 0.00 0.00 0.00 3.86
241 242 2.003937 TTAAAGGTTGGGGTTGAGGC 57.996 50.000 0.00 0.00 0.00 4.70
242 243 0.854218 TAAAGGTTGGGGTTGAGGCA 59.146 50.000 0.00 0.00 0.00 4.75
243 244 0.031616 AAAGGTTGGGGTTGAGGCAA 60.032 50.000 0.00 0.00 0.00 4.52
244 245 0.031616 AAGGTTGGGGTTGAGGCAAA 60.032 50.000 0.00 0.00 0.00 3.68
245 246 0.469892 AGGTTGGGGTTGAGGCAAAG 60.470 55.000 0.00 0.00 0.00 2.77
246 247 0.469144 GGTTGGGGTTGAGGCAAAGA 60.469 55.000 0.00 0.00 0.00 2.52
247 248 0.673985 GTTGGGGTTGAGGCAAAGAC 59.326 55.000 0.00 0.00 0.00 3.01
248 249 0.555769 TTGGGGTTGAGGCAAAGACT 59.444 50.000 0.00 0.00 0.00 3.24
249 250 1.440618 TGGGGTTGAGGCAAAGACTA 58.559 50.000 0.00 0.00 0.00 2.59
250 251 1.351017 TGGGGTTGAGGCAAAGACTAG 59.649 52.381 0.00 0.00 0.00 2.57
251 252 1.628846 GGGGTTGAGGCAAAGACTAGA 59.371 52.381 0.00 0.00 0.00 2.43
252 253 2.039879 GGGGTTGAGGCAAAGACTAGAA 59.960 50.000 0.00 0.00 0.00 2.10
253 254 3.075148 GGGTTGAGGCAAAGACTAGAAC 58.925 50.000 0.00 0.00 0.00 3.01
254 255 3.075148 GGTTGAGGCAAAGACTAGAACC 58.925 50.000 0.00 0.00 29.63 3.62
255 256 3.075148 GTTGAGGCAAAGACTAGAACCC 58.925 50.000 0.00 0.00 0.00 4.11
256 257 2.621070 TGAGGCAAAGACTAGAACCCT 58.379 47.619 0.00 0.00 0.00 4.34
257 258 2.979678 TGAGGCAAAGACTAGAACCCTT 59.020 45.455 0.00 0.00 0.00 3.95
258 259 4.164981 TGAGGCAAAGACTAGAACCCTTA 58.835 43.478 0.00 0.00 0.00 2.69
259 260 4.595781 TGAGGCAAAGACTAGAACCCTTAA 59.404 41.667 0.00 0.00 0.00 1.85
260 261 5.072600 TGAGGCAAAGACTAGAACCCTTAAA 59.927 40.000 0.00 0.00 0.00 1.52
261 262 6.140968 AGGCAAAGACTAGAACCCTTAAAT 57.859 37.500 0.00 0.00 0.00 1.40
262 263 6.181190 AGGCAAAGACTAGAACCCTTAAATC 58.819 40.000 0.00 0.00 0.00 2.17
263 264 5.357314 GGCAAAGACTAGAACCCTTAAATCC 59.643 44.000 0.00 0.00 0.00 3.01
264 265 5.944007 GCAAAGACTAGAACCCTTAAATCCA 59.056 40.000 0.00 0.00 0.00 3.41
265 266 6.433093 GCAAAGACTAGAACCCTTAAATCCAA 59.567 38.462 0.00 0.00 0.00 3.53
266 267 7.575155 GCAAAGACTAGAACCCTTAAATCCAAC 60.575 40.741 0.00 0.00 0.00 3.77
267 268 6.063496 AGACTAGAACCCTTAAATCCAACC 57.937 41.667 0.00 0.00 0.00 3.77
268 269 5.045066 AGACTAGAACCCTTAAATCCAACCC 60.045 44.000 0.00 0.00 0.00 4.11
269 270 4.856182 ACTAGAACCCTTAAATCCAACCCT 59.144 41.667 0.00 0.00 0.00 4.34
270 271 4.759793 AGAACCCTTAAATCCAACCCTT 57.240 40.909 0.00 0.00 0.00 3.95
271 272 5.871324 AGAACCCTTAAATCCAACCCTTA 57.129 39.130 0.00 0.00 0.00 2.69
272 273 6.222227 AGAACCCTTAAATCCAACCCTTAA 57.778 37.500 0.00 0.00 0.00 1.85
273 274 6.626238 AGAACCCTTAAATCCAACCCTTAAA 58.374 36.000 0.00 0.00 0.00 1.52
274 275 6.724441 AGAACCCTTAAATCCAACCCTTAAAG 59.276 38.462 0.00 0.00 0.00 1.85
275 276 5.972698 ACCCTTAAATCCAACCCTTAAAGT 58.027 37.500 0.00 0.00 0.00 2.66
276 277 7.106204 ACCCTTAAATCCAACCCTTAAAGTA 57.894 36.000 0.00 0.00 0.00 2.24
277 278 7.179966 ACCCTTAAATCCAACCCTTAAAGTAG 58.820 38.462 0.00 0.00 0.00 2.57
278 279 7.179966 CCCTTAAATCCAACCCTTAAAGTAGT 58.820 38.462 0.00 0.00 0.00 2.73
279 280 7.672660 CCCTTAAATCCAACCCTTAAAGTAGTT 59.327 37.037 0.00 0.00 0.00 2.24
280 281 9.085645 CCTTAAATCCAACCCTTAAAGTAGTTT 57.914 33.333 0.37 0.37 0.00 2.66
294 295 9.908152 CTTAAAGTAGTTTAAGGGTTGGATTTG 57.092 33.333 25.69 5.72 46.28 2.32
295 296 9.643735 TTAAAGTAGTTTAAGGGTTGGATTTGA 57.356 29.630 10.79 0.00 33.93 2.69
296 297 7.761038 AAGTAGTTTAAGGGTTGGATTTGAG 57.239 36.000 0.00 0.00 0.00 3.02
297 298 6.246163 AGTAGTTTAAGGGTTGGATTTGAGG 58.754 40.000 0.00 0.00 0.00 3.86
298 299 5.074746 AGTTTAAGGGTTGGATTTGAGGT 57.925 39.130 0.00 0.00 0.00 3.85
299 300 5.464069 AGTTTAAGGGTTGGATTTGAGGTT 58.536 37.500 0.00 0.00 0.00 3.50
300 301 5.538813 AGTTTAAGGGTTGGATTTGAGGTTC 59.461 40.000 0.00 0.00 0.00 3.62
301 302 3.903530 AAGGGTTGGATTTGAGGTTCT 57.096 42.857 0.00 0.00 0.00 3.01
302 303 6.457159 TTAAGGGTTGGATTTGAGGTTCTA 57.543 37.500 0.00 0.00 0.00 2.10
303 304 4.576330 AGGGTTGGATTTGAGGTTCTAG 57.424 45.455 0.00 0.00 0.00 2.43
304 305 3.916989 AGGGTTGGATTTGAGGTTCTAGT 59.083 43.478 0.00 0.00 0.00 2.57
305 306 4.019231 AGGGTTGGATTTGAGGTTCTAGTC 60.019 45.833 0.00 0.00 0.00 2.59
306 307 4.019231 GGGTTGGATTTGAGGTTCTAGTCT 60.019 45.833 0.00 0.00 0.00 3.24
307 308 5.515008 GGGTTGGATTTGAGGTTCTAGTCTT 60.515 44.000 0.00 0.00 0.00 3.01
308 309 6.004574 GGTTGGATTTGAGGTTCTAGTCTTT 58.995 40.000 0.00 0.00 0.00 2.52
309 310 6.072452 GGTTGGATTTGAGGTTCTAGTCTTTG 60.072 42.308 0.00 0.00 0.00 2.77
310 311 5.003804 TGGATTTGAGGTTCTAGTCTTTGC 58.996 41.667 0.00 0.00 0.00 3.68
311 312 4.396478 GGATTTGAGGTTCTAGTCTTTGCC 59.604 45.833 0.00 0.00 0.00 4.52
312 313 3.418684 TTGAGGTTCTAGTCTTTGCCC 57.581 47.619 0.00 0.00 0.00 5.36
313 314 1.628846 TGAGGTTCTAGTCTTTGCCCC 59.371 52.381 0.00 0.00 0.00 5.80
314 315 1.909986 GAGGTTCTAGTCTTTGCCCCT 59.090 52.381 0.00 0.00 0.00 4.79
315 316 1.630878 AGGTTCTAGTCTTTGCCCCTG 59.369 52.381 0.00 0.00 0.00 4.45
316 317 1.351350 GGTTCTAGTCTTTGCCCCTGT 59.649 52.381 0.00 0.00 0.00 4.00
317 318 2.224793 GGTTCTAGTCTTTGCCCCTGTT 60.225 50.000 0.00 0.00 0.00 3.16
318 319 3.487372 GTTCTAGTCTTTGCCCCTGTTT 58.513 45.455 0.00 0.00 0.00 2.83
319 320 3.876309 TCTAGTCTTTGCCCCTGTTTT 57.124 42.857 0.00 0.00 0.00 2.43
320 321 4.178956 TCTAGTCTTTGCCCCTGTTTTT 57.821 40.909 0.00 0.00 0.00 1.94
321 322 4.142038 TCTAGTCTTTGCCCCTGTTTTTC 58.858 43.478 0.00 0.00 0.00 2.29
322 323 2.745968 AGTCTTTGCCCCTGTTTTTCA 58.254 42.857 0.00 0.00 0.00 2.69
323 324 3.103742 AGTCTTTGCCCCTGTTTTTCAA 58.896 40.909 0.00 0.00 0.00 2.69
324 325 3.118775 AGTCTTTGCCCCTGTTTTTCAAC 60.119 43.478 0.00 0.00 0.00 3.18
325 326 2.169561 TCTTTGCCCCTGTTTTTCAACC 59.830 45.455 0.00 0.00 31.02 3.77
326 327 0.833949 TTGCCCCTGTTTTTCAACCC 59.166 50.000 0.00 0.00 31.02 4.11
327 328 0.031616 TGCCCCTGTTTTTCAACCCT 60.032 50.000 0.00 0.00 31.02 4.34
328 329 1.128200 GCCCCTGTTTTTCAACCCTT 58.872 50.000 0.00 0.00 31.02 3.95
329 330 2.321719 GCCCCTGTTTTTCAACCCTTA 58.678 47.619 0.00 0.00 31.02 2.69
330 331 2.701423 GCCCCTGTTTTTCAACCCTTAA 59.299 45.455 0.00 0.00 31.02 1.85
331 332 3.134985 GCCCCTGTTTTTCAACCCTTAAA 59.865 43.478 0.00 0.00 31.02 1.52
332 333 4.384318 GCCCCTGTTTTTCAACCCTTAAAA 60.384 41.667 0.00 0.00 31.02 1.52
333 334 5.746284 CCCCTGTTTTTCAACCCTTAAAAA 58.254 37.500 0.00 0.00 33.41 1.94
334 335 6.361433 CCCCTGTTTTTCAACCCTTAAAAAT 58.639 36.000 0.00 0.00 37.04 1.82
335 336 6.262049 CCCCTGTTTTTCAACCCTTAAAAATG 59.738 38.462 0.00 0.00 37.04 2.32
336 337 6.238621 CCCTGTTTTTCAACCCTTAAAAATGC 60.239 38.462 0.00 0.00 37.04 3.56
337 338 6.238621 CCTGTTTTTCAACCCTTAAAAATGCC 60.239 38.462 0.00 0.00 37.04 4.40
338 339 6.180472 TGTTTTTCAACCCTTAAAAATGCCA 58.820 32.000 0.00 0.00 37.04 4.92
339 340 6.659242 TGTTTTTCAACCCTTAAAAATGCCAA 59.341 30.769 0.00 0.00 37.04 4.52
340 341 7.176690 TGTTTTTCAACCCTTAAAAATGCCAAA 59.823 29.630 0.00 0.00 37.04 3.28
341 342 7.703058 TTTTCAACCCTTAAAAATGCCAAAA 57.297 28.000 0.00 0.00 0.00 2.44
342 343 7.703058 TTTCAACCCTTAAAAATGCCAAAAA 57.297 28.000 0.00 0.00 0.00 1.94
343 344 6.685527 TCAACCCTTAAAAATGCCAAAAAC 57.314 33.333 0.00 0.00 0.00 2.43
344 345 6.418946 TCAACCCTTAAAAATGCCAAAAACT 58.581 32.000 0.00 0.00 0.00 2.66
345 346 6.317391 TCAACCCTTAAAAATGCCAAAAACTG 59.683 34.615 0.00 0.00 0.00 3.16
358 359 4.696455 CCAAAAACTGGCATTTCTCAACT 58.304 39.130 0.00 0.00 38.76 3.16
359 360 4.746611 CCAAAAACTGGCATTTCTCAACTC 59.253 41.667 0.00 0.00 38.76 3.01
360 361 5.452356 CCAAAAACTGGCATTTCTCAACTCT 60.452 40.000 0.00 0.00 38.76 3.24
361 362 5.859205 AAAACTGGCATTTCTCAACTCTT 57.141 34.783 0.00 0.00 0.00 2.85
362 363 6.959639 AAAACTGGCATTTCTCAACTCTTA 57.040 33.333 0.00 0.00 0.00 2.10
363 364 6.959639 AAACTGGCATTTCTCAACTCTTAA 57.040 33.333 0.00 0.00 0.00 1.85
364 365 6.959639 AACTGGCATTTCTCAACTCTTAAA 57.040 33.333 0.00 0.00 0.00 1.52
365 366 6.959639 ACTGGCATTTCTCAACTCTTAAAA 57.040 33.333 0.00 0.00 0.00 1.52
366 367 6.739112 ACTGGCATTTCTCAACTCTTAAAAC 58.261 36.000 0.00 0.00 0.00 2.43
367 368 6.547510 ACTGGCATTTCTCAACTCTTAAAACT 59.452 34.615 0.00 0.00 0.00 2.66
368 369 6.738114 TGGCATTTCTCAACTCTTAAAACTG 58.262 36.000 0.00 0.00 0.00 3.16
369 370 5.631096 GGCATTTCTCAACTCTTAAAACTGC 59.369 40.000 0.00 0.00 0.00 4.40
370 371 6.442112 GCATTTCTCAACTCTTAAAACTGCT 58.558 36.000 0.00 0.00 0.00 4.24
371 372 6.920210 GCATTTCTCAACTCTTAAAACTGCTT 59.080 34.615 0.00 0.00 0.00 3.91
372 373 7.436376 GCATTTCTCAACTCTTAAAACTGCTTT 59.564 33.333 0.00 0.00 0.00 3.51
373 374 9.950680 CATTTCTCAACTCTTAAAACTGCTTTA 57.049 29.630 0.00 0.00 0.00 1.85
384 385 8.812147 CTTAAAACTGCTTTAAGGGTTTAAGG 57.188 34.615 16.62 5.72 46.98 2.69
385 386 5.801531 AAACTGCTTTAAGGGTTTAAGGG 57.198 39.130 0.00 0.00 31.34 3.95
386 387 4.464652 ACTGCTTTAAGGGTTTAAGGGT 57.535 40.909 0.00 0.00 30.84 4.34
387 388 4.811498 ACTGCTTTAAGGGTTTAAGGGTT 58.189 39.130 0.00 0.00 30.84 4.11
388 389 5.213519 ACTGCTTTAAGGGTTTAAGGGTTT 58.786 37.500 0.00 0.00 30.84 3.27
389 390 5.069914 ACTGCTTTAAGGGTTTAAGGGTTTG 59.930 40.000 0.00 0.00 30.84 2.93
390 391 5.209659 TGCTTTAAGGGTTTAAGGGTTTGA 58.790 37.500 0.00 0.00 30.84 2.69
391 392 5.303333 TGCTTTAAGGGTTTAAGGGTTTGAG 59.697 40.000 0.00 0.00 30.84 3.02
392 393 5.279306 GCTTTAAGGGTTTAAGGGTTTGAGG 60.279 44.000 0.00 0.00 30.84 3.86
393 394 5.666474 TTAAGGGTTTAAGGGTTTGAGGA 57.334 39.130 0.00 0.00 0.00 3.71
394 395 4.759793 AAGGGTTTAAGGGTTTGAGGAT 57.240 40.909 0.00 0.00 0.00 3.24
395 396 4.759793 AGGGTTTAAGGGTTTGAGGATT 57.240 40.909 0.00 0.00 0.00 3.01
396 397 4.673968 AGGGTTTAAGGGTTTGAGGATTC 58.326 43.478 0.00 0.00 0.00 2.52
397 398 4.357097 AGGGTTTAAGGGTTTGAGGATTCT 59.643 41.667 0.00 0.00 0.00 2.40
398 399 5.554350 AGGGTTTAAGGGTTTGAGGATTCTA 59.446 40.000 0.00 0.00 0.00 2.10
399 400 5.651139 GGGTTTAAGGGTTTGAGGATTCTAC 59.349 44.000 0.00 0.00 0.00 2.59
400 401 6.482524 GGTTTAAGGGTTTGAGGATTCTACT 58.517 40.000 0.00 0.00 0.00 2.57
401 402 7.311486 GGGTTTAAGGGTTTGAGGATTCTACTA 60.311 40.741 0.00 0.00 0.00 1.82
402 403 7.769507 GGTTTAAGGGTTTGAGGATTCTACTAG 59.230 40.741 0.00 0.00 0.00 2.57
403 404 5.959583 AAGGGTTTGAGGATTCTACTAGG 57.040 43.478 0.00 0.00 0.00 3.02
404 405 4.299485 AGGGTTTGAGGATTCTACTAGGG 58.701 47.826 0.00 0.00 0.00 3.53
405 406 4.015541 AGGGTTTGAGGATTCTACTAGGGA 60.016 45.833 0.00 0.00 0.00 4.20
406 407 4.908481 GGGTTTGAGGATTCTACTAGGGAT 59.092 45.833 0.00 0.00 0.00 3.85
407 408 5.221742 GGGTTTGAGGATTCTACTAGGGATG 60.222 48.000 0.00 0.00 0.00 3.51
427 428 1.363744 CTCTTAGAACCAGCAAGGCG 58.636 55.000 0.00 0.00 43.14 5.52
454 461 1.546476 ACTGCTCACACTGCTACTACC 59.454 52.381 0.00 0.00 0.00 3.18
577 597 2.338257 CCAACCGCACGGCAAATT 59.662 55.556 9.43 0.00 39.32 1.82
602 622 4.351054 CCCAGTGGGTGGCTGTCC 62.351 72.222 21.24 0.00 46.45 4.02
654 678 1.068434 CACACCCGGTTTGCTTTGAAT 59.932 47.619 0.00 0.00 0.00 2.57
707 752 1.893168 TTCTTACGGCGCTGCGAAAC 61.893 55.000 28.07 13.68 0.00 2.78
787 850 2.910479 ACCGTGTGACGAGCCTCA 60.910 61.111 0.00 0.00 46.05 3.86
796 859 4.379243 CGAGCCTCAGCCGTTGGT 62.379 66.667 0.00 0.00 41.25 3.67
896 959 1.654220 CCAACAACCGTCCAAGCAG 59.346 57.895 0.00 0.00 0.00 4.24
897 960 1.008538 CAACAACCGTCCAAGCAGC 60.009 57.895 0.00 0.00 0.00 5.25
898 961 1.453015 AACAACCGTCCAAGCAGCA 60.453 52.632 0.00 0.00 0.00 4.41
1728 2356 0.548031 AGTACCTGCACATGATGGGG 59.452 55.000 0.00 0.00 0.00 4.96
1752 2380 2.678934 TACCGCGACCTCAAGCCT 60.679 61.111 8.23 0.00 0.00 4.58
1902 2595 0.946221 CATCCTGCTTCCCGATACGC 60.946 60.000 0.00 0.00 0.00 4.42
1907 2600 0.459585 TGCTTCCCGATACGCTTCAC 60.460 55.000 0.00 0.00 0.00 3.18
1908 2601 0.459585 GCTTCCCGATACGCTTCACA 60.460 55.000 0.00 0.00 0.00 3.58
2472 3190 2.273179 TGTCCTCCCCGAGTCAACG 61.273 63.158 0.00 0.00 0.00 4.10
2615 3351 4.227197 AGTAGTATTAGCTCCCAGTGCAT 58.773 43.478 0.00 0.00 0.00 3.96
2692 3437 1.347050 AGTGCTGTCTTGTGCTCTGAT 59.653 47.619 0.00 0.00 32.73 2.90
2694 3439 3.007290 AGTGCTGTCTTGTGCTCTGATAA 59.993 43.478 0.00 0.00 32.73 1.75
2698 3443 5.582269 TGCTGTCTTGTGCTCTGATAATTAC 59.418 40.000 0.00 0.00 0.00 1.89
2721 3466 2.210116 AGGTTACACTTGTCAGCAACG 58.790 47.619 0.00 0.00 0.00 4.10
2722 3467 1.333791 GGTTACACTTGTCAGCAACGC 60.334 52.381 0.00 0.00 0.00 4.84
2731 3476 1.669760 TCAGCAACGCCTAAACCCG 60.670 57.895 0.00 0.00 0.00 5.28
2760 3506 8.897752 GCTTAATCACTCCATTTTTCTACTGAT 58.102 33.333 0.00 0.00 0.00 2.90
2765 3511 8.924511 TCACTCCATTTTTCTACTGATTTCTT 57.075 30.769 0.00 0.00 0.00 2.52
2766 3512 9.003658 TCACTCCATTTTTCTACTGATTTCTTC 57.996 33.333 0.00 0.00 0.00 2.87
2767 3513 8.786898 CACTCCATTTTTCTACTGATTTCTTCA 58.213 33.333 0.00 0.00 0.00 3.02
2769 3515 7.806690 TCCATTTTTCTACTGATTTCTTCACG 58.193 34.615 0.00 0.00 0.00 4.35
2770 3516 7.444183 TCCATTTTTCTACTGATTTCTTCACGT 59.556 33.333 0.00 0.00 0.00 4.49
2771 3517 8.717821 CCATTTTTCTACTGATTTCTTCACGTA 58.282 33.333 0.00 0.00 0.00 3.57
2772 3518 9.746711 CATTTTTCTACTGATTTCTTCACGTAG 57.253 33.333 0.00 0.00 37.39 3.51
2774 3520 9.970395 TTTTTCTACTGATTTCTTCACGTAGTA 57.030 29.630 0.00 0.00 41.61 1.82
2775 3521 9.622004 TTTTCTACTGATTTCTTCACGTAGTAG 57.378 33.333 9.17 9.17 41.61 2.57
2776 3522 7.918536 TCTACTGATTTCTTCACGTAGTAGT 57.081 36.000 13.29 0.00 41.61 2.73
2777 3523 9.440773 TTCTACTGATTTCTTCACGTAGTAGTA 57.559 33.333 13.29 4.63 41.61 1.82
2778 3524 9.096160 TCTACTGATTTCTTCACGTAGTAGTAG 57.904 37.037 13.29 0.00 41.61 2.57
2779 3525 7.684937 ACTGATTTCTTCACGTAGTAGTAGT 57.315 36.000 0.00 0.00 41.61 2.73
2780 3526 8.783833 ACTGATTTCTTCACGTAGTAGTAGTA 57.216 34.615 0.00 0.00 41.61 1.82
2781 3527 9.393512 ACTGATTTCTTCACGTAGTAGTAGTAT 57.606 33.333 0.00 0.00 41.61 2.12
2802 3548 8.954834 AGTATACTCCTAGTACTACTCTAGCA 57.045 38.462 0.00 0.00 32.84 3.49
2803 3549 9.378504 AGTATACTCCTAGTACTACTCTAGCAA 57.621 37.037 0.00 0.00 32.84 3.91
2804 3550 9.995003 GTATACTCCTAGTACTACTCTAGCAAA 57.005 37.037 0.00 0.00 32.84 3.68
2806 3552 6.961042 ACTCCTAGTACTACTCTAGCAAAGT 58.039 40.000 0.00 0.00 35.07 2.66
2807 3553 6.824704 ACTCCTAGTACTACTCTAGCAAAGTG 59.175 42.308 0.00 0.00 35.07 3.16
2808 3554 5.589452 TCCTAGTACTACTCTAGCAAAGTGC 59.411 44.000 0.00 0.00 45.46 4.40
2818 3564 4.578871 TCTAGCAAAGTGCAGAGCAATTA 58.421 39.130 5.07 0.00 46.02 1.40
2819 3565 5.003160 TCTAGCAAAGTGCAGAGCAATTAA 58.997 37.500 5.07 0.00 46.02 1.40
2820 3566 4.170292 AGCAAAGTGCAGAGCAATTAAG 57.830 40.909 5.07 3.19 46.02 1.85
2821 3567 3.057033 AGCAAAGTGCAGAGCAATTAAGG 60.057 43.478 5.07 0.57 46.02 2.69
2822 3568 3.057315 GCAAAGTGCAGAGCAATTAAGGA 60.057 43.478 5.07 0.00 46.02 3.36
2823 3569 4.559300 GCAAAGTGCAGAGCAATTAAGGAA 60.559 41.667 5.07 0.00 46.02 3.36
2824 3570 4.773323 AAGTGCAGAGCAATTAAGGAAC 57.227 40.909 2.61 0.00 44.92 3.62
2825 3571 2.744202 AGTGCAGAGCAATTAAGGAACG 59.256 45.455 0.00 0.00 41.47 3.95
2826 3572 2.484264 GTGCAGAGCAATTAAGGAACGT 59.516 45.455 0.00 0.00 41.47 3.99
2903 3649 9.706691 CAAGGAGTACACTGATTAGTTTTTAGA 57.293 33.333 0.00 0.00 34.07 2.10
2993 3739 2.044353 AGGGCTGTGGTTCCCATTAATT 59.956 45.455 0.00 0.00 45.07 1.40
3042 3788 1.643286 TCCTCTCATCTGTCTCTGGGT 59.357 52.381 0.00 0.00 0.00 4.51
3082 3828 1.277273 TGATGAGTTGTCTGAGCCTGG 59.723 52.381 0.00 0.00 0.00 4.45
3089 3835 1.188219 TGTCTGAGCCTGGGTGAGTC 61.188 60.000 12.04 7.40 0.00 3.36
3108 3854 1.170290 CGGGTTTGTGGAGTGGTTCC 61.170 60.000 0.00 0.00 46.98 3.62
3116 3862 1.671742 GGAGTGGTTCCGCTTCTCA 59.328 57.895 6.37 0.00 35.91 3.27
3119 3865 0.832135 AGTGGTTCCGCTTCTCAGGA 60.832 55.000 0.00 0.00 34.19 3.86
3121 3867 0.984230 TGGTTCCGCTTCTCAGGAAT 59.016 50.000 0.01 0.00 46.75 3.01
3122 3868 1.351017 TGGTTCCGCTTCTCAGGAATT 59.649 47.619 0.01 0.00 46.75 2.17
3129 4015 4.020573 TCCGCTTCTCAGGAATTTTACTGA 60.021 41.667 5.17 5.17 45.62 3.41
3147 4033 9.691362 TTTTACTGAAAAATATTCCTGAGTTGC 57.309 29.630 0.00 0.00 32.05 4.17
3151 4037 6.785191 TGAAAAATATTCCTGAGTTGCGATC 58.215 36.000 0.00 0.00 0.00 3.69
3152 4038 5.409643 AAAATATTCCTGAGTTGCGATCG 57.590 39.130 11.69 11.69 0.00 3.69
3153 4039 2.509052 TATTCCTGAGTTGCGATCGG 57.491 50.000 18.30 0.00 0.00 4.18
3154 4040 0.179073 ATTCCTGAGTTGCGATCGGG 60.179 55.000 18.30 7.62 43.52 5.14
3155 4041 2.892640 CCTGAGTTGCGATCGGGA 59.107 61.111 18.30 0.00 44.74 5.14
3156 4042 1.519455 CCTGAGTTGCGATCGGGAC 60.519 63.158 18.30 0.16 44.74 4.46
3158 4044 1.078759 CTGAGTTGCGATCGGGACAC 61.079 60.000 18.30 0.00 0.00 3.67
3159 4045 1.080093 GAGTTGCGATCGGGACACA 60.080 57.895 18.30 2.43 0.00 3.72
3161 4047 1.080093 GTTGCGATCGGGACACAGA 60.080 57.895 18.30 0.00 0.00 3.41
3162 4048 0.460284 GTTGCGATCGGGACACAGAT 60.460 55.000 18.30 0.00 0.00 2.90
3163 4049 0.460109 TTGCGATCGGGACACAGATG 60.460 55.000 18.30 0.00 0.00 2.90
3165 4051 1.439228 CGATCGGGACACAGATGCT 59.561 57.895 7.38 0.00 0.00 3.79
3166 4052 0.873312 CGATCGGGACACAGATGCTG 60.873 60.000 7.38 0.00 37.52 4.41
3167 4053 0.176680 GATCGGGACACAGATGCTGT 59.823 55.000 0.00 0.00 46.51 4.40
3168 4054 0.615331 ATCGGGACACAGATGCTGTT 59.385 50.000 0.00 0.00 42.59 3.16
3170 4056 0.798776 CGGGACACAGATGCTGTTTC 59.201 55.000 5.41 5.41 42.59 2.78
3172 4058 0.798776 GGACACAGATGCTGTTTCCG 59.201 55.000 14.75 0.22 46.66 4.30
3173 4059 0.166814 GACACAGATGCTGTTTCCGC 59.833 55.000 0.00 0.00 42.59 5.54
3267 4178 1.330989 CGCACGCACAATGTTTGTTTG 60.331 47.619 0.00 0.00 43.23 2.93
3318 4229 3.726517 ACGGCAAGTGCACATCGC 61.727 61.111 21.04 17.32 44.36 4.58
3321 4232 2.703798 GGCAAGTGCACATCGCCAT 61.704 57.895 28.90 3.23 44.36 4.40
3324 4235 1.750399 AAGTGCACATCGCCATCCC 60.750 57.895 21.04 0.00 41.33 3.85
3325 4236 3.576356 GTGCACATCGCCATCCCG 61.576 66.667 13.17 0.00 41.33 5.14
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.979911 ACAAAGATACATCATGGGCCAA 58.020 40.909 11.89 0.00 0.00 4.52
3 4 7.100458 AGTAAAACAAAGATACATCATGGGC 57.900 36.000 0.00 0.00 0.00 5.36
25 26 9.667107 TTCGAATCAAATAGGACATAGAAAAGT 57.333 29.630 0.00 0.00 0.00 2.66
26 27 9.922305 GTTCGAATCAAATAGGACATAGAAAAG 57.078 33.333 0.00 0.00 0.00 2.27
27 28 9.443323 TGTTCGAATCAAATAGGACATAGAAAA 57.557 29.630 0.00 0.00 0.00 2.29
28 29 9.443323 TTGTTCGAATCAAATAGGACATAGAAA 57.557 29.630 0.00 0.00 0.00 2.52
29 30 9.613428 ATTGTTCGAATCAAATAGGACATAGAA 57.387 29.630 14.24 0.00 0.00 2.10
30 31 9.613428 AATTGTTCGAATCAAATAGGACATAGA 57.387 29.630 14.24 0.00 0.00 1.98
43 44 9.853555 AGCAAATTACAATAATTGTTCGAATCA 57.146 25.926 0.00 0.00 42.22 2.57
45 46 9.853555 TGAGCAAATTACAATAATTGTTCGAAT 57.146 25.926 0.00 0.00 42.22 3.34
46 47 9.684448 TTGAGCAAATTACAATAATTGTTCGAA 57.316 25.926 0.00 0.00 42.22 3.71
47 48 9.684448 TTTGAGCAAATTACAATAATTGTTCGA 57.316 25.926 0.00 0.00 42.22 3.71
48 49 9.726034 GTTTGAGCAAATTACAATAATTGTTCG 57.274 29.630 0.00 0.00 37.58 3.95
56 57 9.539825 ACAACAATGTTTGAGCAAATTACAATA 57.460 25.926 0.00 0.00 35.91 1.90
57 58 8.436046 ACAACAATGTTTGAGCAAATTACAAT 57.564 26.923 0.00 0.00 35.91 2.71
58 59 7.840342 ACAACAATGTTTGAGCAAATTACAA 57.160 28.000 0.00 0.00 35.91 2.41
59 60 8.932945 TTACAACAATGTTTGAGCAAATTACA 57.067 26.923 0.00 0.00 41.05 2.41
66 67 9.755804 TCAAATTATTACAACAATGTTTGAGCA 57.244 25.926 0.00 0.00 41.05 4.26
88 89 9.579768 CACCGGATAAAACAATAATCATTCAAA 57.420 29.630 9.46 0.00 0.00 2.69
89 90 8.194104 CCACCGGATAAAACAATAATCATTCAA 58.806 33.333 9.46 0.00 0.00 2.69
90 91 7.340743 ACCACCGGATAAAACAATAATCATTCA 59.659 33.333 9.46 0.00 0.00 2.57
91 92 7.647715 CACCACCGGATAAAACAATAATCATTC 59.352 37.037 9.46 0.00 0.00 2.67
92 93 7.123547 ACACCACCGGATAAAACAATAATCATT 59.876 33.333 9.46 0.00 0.00 2.57
93 94 6.605594 ACACCACCGGATAAAACAATAATCAT 59.394 34.615 9.46 0.00 0.00 2.45
94 95 5.946972 ACACCACCGGATAAAACAATAATCA 59.053 36.000 9.46 0.00 0.00 2.57
95 96 6.445357 ACACCACCGGATAAAACAATAATC 57.555 37.500 9.46 0.00 0.00 1.75
96 97 7.941431 TTACACCACCGGATAAAACAATAAT 57.059 32.000 9.46 0.00 0.00 1.28
97 98 7.941431 ATTACACCACCGGATAAAACAATAA 57.059 32.000 9.46 0.00 0.00 1.40
98 99 9.629878 ATTATTACACCACCGGATAAAACAATA 57.370 29.630 9.46 0.75 0.00 1.90
99 100 7.941431 TTATTACACCACCGGATAAAACAAT 57.059 32.000 9.46 1.76 0.00 2.71
100 101 7.941431 ATTATTACACCACCGGATAAAACAA 57.059 32.000 9.46 0.00 0.00 2.83
101 102 8.891720 GTTATTATTACACCACCGGATAAAACA 58.108 33.333 9.46 0.00 0.00 2.83
102 103 9.112725 AGTTATTATTACACCACCGGATAAAAC 57.887 33.333 9.46 7.41 0.00 2.43
104 105 9.985730 CTAGTTATTATTACACCACCGGATAAA 57.014 33.333 9.46 0.00 0.00 1.40
105 106 9.365906 TCTAGTTATTATTACACCACCGGATAA 57.634 33.333 9.46 0.00 0.00 1.75
106 107 8.938801 TCTAGTTATTATTACACCACCGGATA 57.061 34.615 9.46 0.00 0.00 2.59
107 108 7.844493 TCTAGTTATTATTACACCACCGGAT 57.156 36.000 9.46 0.00 0.00 4.18
108 109 7.658525 TTCTAGTTATTATTACACCACCGGA 57.341 36.000 9.46 0.00 0.00 5.14
109 110 8.145767 TCATTCTAGTTATTATTACACCACCGG 58.854 37.037 0.00 0.00 0.00 5.28
110 111 9.706691 ATCATTCTAGTTATTATTACACCACCG 57.293 33.333 0.00 0.00 0.00 4.94
138 139 9.947433 ATTCCATCACATTTGACATAAAACAAT 57.053 25.926 0.00 0.00 33.38 2.71
139 140 9.775854 AATTCCATCACATTTGACATAAAACAA 57.224 25.926 0.00 0.00 33.38 2.83
140 141 9.775854 AAATTCCATCACATTTGACATAAAACA 57.224 25.926 0.00 0.00 33.38 2.83
143 144 9.566530 CGTAAATTCCATCACATTTGACATAAA 57.433 29.630 0.00 0.00 33.38 1.40
144 145 8.951243 TCGTAAATTCCATCACATTTGACATAA 58.049 29.630 0.00 0.00 33.38 1.90
145 146 8.499403 TCGTAAATTCCATCACATTTGACATA 57.501 30.769 0.00 0.00 33.38 2.29
146 147 7.389803 TCGTAAATTCCATCACATTTGACAT 57.610 32.000 0.00 0.00 33.38 3.06
147 148 6.809630 TCGTAAATTCCATCACATTTGACA 57.190 33.333 0.00 0.00 33.38 3.58
148 149 9.385902 CATATCGTAAATTCCATCACATTTGAC 57.614 33.333 0.00 0.00 33.38 3.18
149 150 9.119418 ACATATCGTAAATTCCATCACATTTGA 57.881 29.630 0.00 0.00 35.73 2.69
150 151 9.385902 GACATATCGTAAATTCCATCACATTTG 57.614 33.333 0.00 0.00 0.00 2.32
151 152 9.119418 TGACATATCGTAAATTCCATCACATTT 57.881 29.630 0.00 0.00 0.00 2.32
152 153 8.675705 TGACATATCGTAAATTCCATCACATT 57.324 30.769 0.00 0.00 0.00 2.71
153 154 8.853077 ATGACATATCGTAAATTCCATCACAT 57.147 30.769 0.00 0.00 0.00 3.21
154 155 9.942850 ATATGACATATCGTAAATTCCATCACA 57.057 29.630 1.87 0.00 30.00 3.58
165 166 9.382275 CCCATTTCATCATATGACATATCGTAA 57.618 33.333 7.78 0.00 39.39 3.18
166 167 8.757877 TCCCATTTCATCATATGACATATCGTA 58.242 33.333 7.78 0.00 39.39 3.43
167 168 7.623630 TCCCATTTCATCATATGACATATCGT 58.376 34.615 7.78 0.00 39.39 3.73
168 169 8.557029 CATCCCATTTCATCATATGACATATCG 58.443 37.037 7.78 2.51 39.39 2.92
169 170 9.623000 TCATCCCATTTCATCATATGACATATC 57.377 33.333 7.78 0.00 39.39 1.63
170 171 9.984590 TTCATCCCATTTCATCATATGACATAT 57.015 29.630 7.78 1.87 39.39 1.78
171 172 9.810870 TTTCATCCCATTTCATCATATGACATA 57.189 29.630 7.78 0.00 39.39 2.29
172 173 8.715190 TTTCATCCCATTTCATCATATGACAT 57.285 30.769 7.78 0.00 39.39 3.06
173 174 8.581578 CATTTCATCCCATTTCATCATATGACA 58.418 33.333 7.78 0.00 39.39 3.58
174 175 8.582437 ACATTTCATCCCATTTCATCATATGAC 58.418 33.333 7.78 0.00 39.39 3.06
175 176 8.581578 CACATTTCATCCCATTTCATCATATGA 58.418 33.333 8.10 8.10 37.55 2.15
176 177 8.364894 ACACATTTCATCCCATTTCATCATATG 58.635 33.333 0.00 0.00 0.00 1.78
177 178 8.364894 CACACATTTCATCCCATTTCATCATAT 58.635 33.333 0.00 0.00 0.00 1.78
178 179 7.560626 TCACACATTTCATCCCATTTCATCATA 59.439 33.333 0.00 0.00 0.00 2.15
179 180 6.381707 TCACACATTTCATCCCATTTCATCAT 59.618 34.615 0.00 0.00 0.00 2.45
180 181 5.715753 TCACACATTTCATCCCATTTCATCA 59.284 36.000 0.00 0.00 0.00 3.07
181 182 6.211587 TCACACATTTCATCCCATTTCATC 57.788 37.500 0.00 0.00 0.00 2.92
182 183 6.801718 ATCACACATTTCATCCCATTTCAT 57.198 33.333 0.00 0.00 0.00 2.57
183 184 7.342541 ACATATCACACATTTCATCCCATTTCA 59.657 33.333 0.00 0.00 0.00 2.69
184 185 7.650504 CACATATCACACATTTCATCCCATTTC 59.349 37.037 0.00 0.00 0.00 2.17
185 186 7.342541 TCACATATCACACATTTCATCCCATTT 59.657 33.333 0.00 0.00 0.00 2.32
186 187 6.834969 TCACATATCACACATTTCATCCCATT 59.165 34.615 0.00 0.00 0.00 3.16
187 188 6.367161 TCACATATCACACATTTCATCCCAT 58.633 36.000 0.00 0.00 0.00 4.00
188 189 5.753716 TCACATATCACACATTTCATCCCA 58.246 37.500 0.00 0.00 0.00 4.37
189 190 6.698008 TTCACATATCACACATTTCATCCC 57.302 37.500 0.00 0.00 0.00 3.85
190 191 8.407832 TCATTTCACATATCACACATTTCATCC 58.592 33.333 0.00 0.00 0.00 3.51
191 192 9.229784 GTCATTTCACATATCACACATTTCATC 57.770 33.333 0.00 0.00 0.00 2.92
192 193 8.741841 TGTCATTTCACATATCACACATTTCAT 58.258 29.630 0.00 0.00 0.00 2.57
193 194 8.108551 TGTCATTTCACATATCACACATTTCA 57.891 30.769 0.00 0.00 0.00 2.69
194 195 8.239314 ACTGTCATTTCACATATCACACATTTC 58.761 33.333 0.00 0.00 0.00 2.17
195 196 8.114331 ACTGTCATTTCACATATCACACATTT 57.886 30.769 0.00 0.00 0.00 2.32
196 197 7.692460 ACTGTCATTTCACATATCACACATT 57.308 32.000 0.00 0.00 0.00 2.71
197 198 7.692460 AACTGTCATTTCACATATCACACAT 57.308 32.000 0.00 0.00 0.00 3.21
198 199 7.509141 AAACTGTCATTTCACATATCACACA 57.491 32.000 0.00 0.00 0.00 3.72
199 200 9.891828 TTAAAACTGTCATTTCACATATCACAC 57.108 29.630 0.00 0.00 0.00 3.82
205 206 9.743057 CAACCTTTAAAACTGTCATTTCACATA 57.257 29.630 0.00 0.00 0.00 2.29
206 207 7.710475 CCAACCTTTAAAACTGTCATTTCACAT 59.290 33.333 0.00 0.00 0.00 3.21
207 208 7.038659 CCAACCTTTAAAACTGTCATTTCACA 58.961 34.615 0.00 0.00 0.00 3.58
208 209 6.478673 CCCAACCTTTAAAACTGTCATTTCAC 59.521 38.462 0.00 0.00 0.00 3.18
209 210 6.407525 CCCCAACCTTTAAAACTGTCATTTCA 60.408 38.462 0.00 0.00 0.00 2.69
210 211 5.989168 CCCCAACCTTTAAAACTGTCATTTC 59.011 40.000 0.00 0.00 0.00 2.17
211 212 5.427157 ACCCCAACCTTTAAAACTGTCATTT 59.573 36.000 0.00 0.00 0.00 2.32
212 213 4.966168 ACCCCAACCTTTAAAACTGTCATT 59.034 37.500 0.00 0.00 0.00 2.57
213 214 4.552674 ACCCCAACCTTTAAAACTGTCAT 58.447 39.130 0.00 0.00 0.00 3.06
214 215 3.983821 ACCCCAACCTTTAAAACTGTCA 58.016 40.909 0.00 0.00 0.00 3.58
215 216 4.403113 TCAACCCCAACCTTTAAAACTGTC 59.597 41.667 0.00 0.00 0.00 3.51
216 217 4.354662 TCAACCCCAACCTTTAAAACTGT 58.645 39.130 0.00 0.00 0.00 3.55
217 218 4.202212 CCTCAACCCCAACCTTTAAAACTG 60.202 45.833 0.00 0.00 0.00 3.16
218 219 3.964688 CCTCAACCCCAACCTTTAAAACT 59.035 43.478 0.00 0.00 0.00 2.66
219 220 3.493699 GCCTCAACCCCAACCTTTAAAAC 60.494 47.826 0.00 0.00 0.00 2.43
220 221 2.701423 GCCTCAACCCCAACCTTTAAAA 59.299 45.455 0.00 0.00 0.00 1.52
221 222 2.321719 GCCTCAACCCCAACCTTTAAA 58.678 47.619 0.00 0.00 0.00 1.52
222 223 1.218196 TGCCTCAACCCCAACCTTTAA 59.782 47.619 0.00 0.00 0.00 1.52
223 224 0.854218 TGCCTCAACCCCAACCTTTA 59.146 50.000 0.00 0.00 0.00 1.85
224 225 0.031616 TTGCCTCAACCCCAACCTTT 60.032 50.000 0.00 0.00 0.00 3.11
225 226 0.031616 TTTGCCTCAACCCCAACCTT 60.032 50.000 0.00 0.00 0.00 3.50
226 227 0.469892 CTTTGCCTCAACCCCAACCT 60.470 55.000 0.00 0.00 0.00 3.50
227 228 0.469144 TCTTTGCCTCAACCCCAACC 60.469 55.000 0.00 0.00 0.00 3.77
228 229 0.673985 GTCTTTGCCTCAACCCCAAC 59.326 55.000 0.00 0.00 0.00 3.77
229 230 0.555769 AGTCTTTGCCTCAACCCCAA 59.444 50.000 0.00 0.00 0.00 4.12
230 231 1.351017 CTAGTCTTTGCCTCAACCCCA 59.649 52.381 0.00 0.00 0.00 4.96
231 232 1.628846 TCTAGTCTTTGCCTCAACCCC 59.371 52.381 0.00 0.00 0.00 4.95
232 233 3.075148 GTTCTAGTCTTTGCCTCAACCC 58.925 50.000 0.00 0.00 0.00 4.11
233 234 3.075148 GGTTCTAGTCTTTGCCTCAACC 58.925 50.000 0.00 0.00 0.00 3.77
234 235 3.075148 GGGTTCTAGTCTTTGCCTCAAC 58.925 50.000 0.00 0.00 0.00 3.18
235 236 2.979678 AGGGTTCTAGTCTTTGCCTCAA 59.020 45.455 0.00 0.00 0.00 3.02
236 237 2.621070 AGGGTTCTAGTCTTTGCCTCA 58.379 47.619 0.00 0.00 0.00 3.86
237 238 3.704800 AAGGGTTCTAGTCTTTGCCTC 57.295 47.619 0.00 0.00 0.00 4.70
238 239 5.578157 TTTAAGGGTTCTAGTCTTTGCCT 57.422 39.130 0.00 0.00 0.00 4.75
239 240 5.357314 GGATTTAAGGGTTCTAGTCTTTGCC 59.643 44.000 0.00 0.00 0.00 4.52
240 241 5.944007 TGGATTTAAGGGTTCTAGTCTTTGC 59.056 40.000 0.00 0.00 0.00 3.68
241 242 7.094334 GGTTGGATTTAAGGGTTCTAGTCTTTG 60.094 40.741 0.00 0.00 0.00 2.77
242 243 6.946583 GGTTGGATTTAAGGGTTCTAGTCTTT 59.053 38.462 0.00 0.00 0.00 2.52
243 244 6.482524 GGTTGGATTTAAGGGTTCTAGTCTT 58.517 40.000 0.00 0.00 0.00 3.01
244 245 5.045066 GGGTTGGATTTAAGGGTTCTAGTCT 60.045 44.000 0.00 0.00 0.00 3.24
245 246 5.045066 AGGGTTGGATTTAAGGGTTCTAGTC 60.045 44.000 0.00 0.00 0.00 2.59
246 247 4.856182 AGGGTTGGATTTAAGGGTTCTAGT 59.144 41.667 0.00 0.00 0.00 2.57
247 248 5.452341 AGGGTTGGATTTAAGGGTTCTAG 57.548 43.478 0.00 0.00 0.00 2.43
248 249 5.871324 AAGGGTTGGATTTAAGGGTTCTA 57.129 39.130 0.00 0.00 0.00 2.10
249 250 4.759793 AAGGGTTGGATTTAAGGGTTCT 57.240 40.909 0.00 0.00 0.00 3.01
250 251 6.495872 ACTTTAAGGGTTGGATTTAAGGGTTC 59.504 38.462 0.00 0.00 0.00 3.62
251 252 6.387127 ACTTTAAGGGTTGGATTTAAGGGTT 58.613 36.000 0.00 0.00 0.00 4.11
252 253 5.972698 ACTTTAAGGGTTGGATTTAAGGGT 58.027 37.500 0.00 0.00 0.00 4.34
253 254 7.179966 ACTACTTTAAGGGTTGGATTTAAGGG 58.820 38.462 0.00 0.00 0.00 3.95
254 255 8.645814 AACTACTTTAAGGGTTGGATTTAAGG 57.354 34.615 0.00 0.00 0.00 2.69
268 269 9.908152 CAAATCCAACCCTTAAACTACTTTAAG 57.092 33.333 7.34 7.34 44.63 1.85
269 270 9.643735 TCAAATCCAACCCTTAAACTACTTTAA 57.356 29.630 0.00 0.00 32.11 1.52
270 271 9.292195 CTCAAATCCAACCCTTAAACTACTTTA 57.708 33.333 0.00 0.00 0.00 1.85
271 272 7.232737 CCTCAAATCCAACCCTTAAACTACTTT 59.767 37.037 0.00 0.00 0.00 2.66
272 273 6.719829 CCTCAAATCCAACCCTTAAACTACTT 59.280 38.462 0.00 0.00 0.00 2.24
273 274 6.183361 ACCTCAAATCCAACCCTTAAACTACT 60.183 38.462 0.00 0.00 0.00 2.57
274 275 6.008331 ACCTCAAATCCAACCCTTAAACTAC 58.992 40.000 0.00 0.00 0.00 2.73
275 276 6.208840 ACCTCAAATCCAACCCTTAAACTA 57.791 37.500 0.00 0.00 0.00 2.24
276 277 5.074746 ACCTCAAATCCAACCCTTAAACT 57.925 39.130 0.00 0.00 0.00 2.66
277 278 5.538813 AGAACCTCAAATCCAACCCTTAAAC 59.461 40.000 0.00 0.00 0.00 2.01
278 279 5.711698 AGAACCTCAAATCCAACCCTTAAA 58.288 37.500 0.00 0.00 0.00 1.52
279 280 5.333566 AGAACCTCAAATCCAACCCTTAA 57.666 39.130 0.00 0.00 0.00 1.85
280 281 5.550403 ACTAGAACCTCAAATCCAACCCTTA 59.450 40.000 0.00 0.00 0.00 2.69
281 282 3.903530 AGAACCTCAAATCCAACCCTT 57.096 42.857 0.00 0.00 0.00 3.95
282 283 3.916989 ACTAGAACCTCAAATCCAACCCT 59.083 43.478 0.00 0.00 0.00 4.34
283 284 4.019231 AGACTAGAACCTCAAATCCAACCC 60.019 45.833 0.00 0.00 0.00 4.11
284 285 5.167303 AGACTAGAACCTCAAATCCAACC 57.833 43.478 0.00 0.00 0.00 3.77
285 286 6.568653 GCAAAGACTAGAACCTCAAATCCAAC 60.569 42.308 0.00 0.00 0.00 3.77
286 287 5.473504 GCAAAGACTAGAACCTCAAATCCAA 59.526 40.000 0.00 0.00 0.00 3.53
287 288 5.003804 GCAAAGACTAGAACCTCAAATCCA 58.996 41.667 0.00 0.00 0.00 3.41
288 289 4.396478 GGCAAAGACTAGAACCTCAAATCC 59.604 45.833 0.00 0.00 0.00 3.01
289 290 4.396478 GGGCAAAGACTAGAACCTCAAATC 59.604 45.833 0.00 0.00 0.00 2.17
290 291 4.336280 GGGCAAAGACTAGAACCTCAAAT 58.664 43.478 0.00 0.00 0.00 2.32
291 292 3.497942 GGGGCAAAGACTAGAACCTCAAA 60.498 47.826 0.00 0.00 0.00 2.69
292 293 2.039879 GGGGCAAAGACTAGAACCTCAA 59.960 50.000 0.00 0.00 0.00 3.02
293 294 1.628846 GGGGCAAAGACTAGAACCTCA 59.371 52.381 0.00 0.00 0.00 3.86
294 295 1.909986 AGGGGCAAAGACTAGAACCTC 59.090 52.381 0.00 0.00 0.00 3.85
295 296 1.630878 CAGGGGCAAAGACTAGAACCT 59.369 52.381 0.00 0.00 0.00 3.50
296 297 1.351350 ACAGGGGCAAAGACTAGAACC 59.649 52.381 0.00 0.00 0.00 3.62
297 298 2.861147 ACAGGGGCAAAGACTAGAAC 57.139 50.000 0.00 0.00 0.00 3.01
298 299 3.876309 AAACAGGGGCAAAGACTAGAA 57.124 42.857 0.00 0.00 0.00 2.10
299 300 3.876309 AAAACAGGGGCAAAGACTAGA 57.124 42.857 0.00 0.00 0.00 2.43
300 301 3.888930 TGAAAAACAGGGGCAAAGACTAG 59.111 43.478 0.00 0.00 0.00 2.57
301 302 3.904717 TGAAAAACAGGGGCAAAGACTA 58.095 40.909 0.00 0.00 0.00 2.59
302 303 2.745968 TGAAAAACAGGGGCAAAGACT 58.254 42.857 0.00 0.00 0.00 3.24
303 304 3.194861 GTTGAAAAACAGGGGCAAAGAC 58.805 45.455 0.00 0.00 0.00 3.01
304 305 2.169561 GGTTGAAAAACAGGGGCAAAGA 59.830 45.455 0.00 0.00 30.22 2.52
305 306 2.560504 GGTTGAAAAACAGGGGCAAAG 58.439 47.619 0.00 0.00 30.22 2.77
306 307 1.210722 GGGTTGAAAAACAGGGGCAAA 59.789 47.619 0.00 0.00 32.77 3.68
307 308 0.833949 GGGTTGAAAAACAGGGGCAA 59.166 50.000 0.00 0.00 32.77 4.52
308 309 0.031616 AGGGTTGAAAAACAGGGGCA 60.032 50.000 0.00 0.00 32.77 5.36
309 310 1.128200 AAGGGTTGAAAAACAGGGGC 58.872 50.000 0.00 0.00 32.77 5.80
310 311 5.360649 TTTTAAGGGTTGAAAAACAGGGG 57.639 39.130 0.00 0.00 32.77 4.79
311 312 6.238621 GCATTTTTAAGGGTTGAAAAACAGGG 60.239 38.462 0.00 0.00 37.35 4.45
312 313 6.238621 GGCATTTTTAAGGGTTGAAAAACAGG 60.239 38.462 0.00 0.00 37.35 4.00
313 314 6.317391 TGGCATTTTTAAGGGTTGAAAAACAG 59.683 34.615 0.00 0.00 37.35 3.16
314 315 6.180472 TGGCATTTTTAAGGGTTGAAAAACA 58.820 32.000 0.00 0.00 37.35 2.83
315 316 6.685527 TGGCATTTTTAAGGGTTGAAAAAC 57.314 33.333 0.00 0.00 37.35 2.43
316 317 7.703058 TTTGGCATTTTTAAGGGTTGAAAAA 57.297 28.000 0.00 0.00 38.51 1.94
317 318 7.703058 TTTTGGCATTTTTAAGGGTTGAAAA 57.297 28.000 0.00 0.00 33.51 2.29
318 319 7.394641 AGTTTTTGGCATTTTTAAGGGTTGAAA 59.605 29.630 0.00 0.00 0.00 2.69
319 320 6.887002 AGTTTTTGGCATTTTTAAGGGTTGAA 59.113 30.769 0.00 0.00 0.00 2.69
320 321 6.317391 CAGTTTTTGGCATTTTTAAGGGTTGA 59.683 34.615 0.00 0.00 0.00 3.18
321 322 6.459435 CCAGTTTTTGGCATTTTTAAGGGTTG 60.459 38.462 0.00 0.00 40.87 3.77
322 323 5.592282 CCAGTTTTTGGCATTTTTAAGGGTT 59.408 36.000 0.00 0.00 40.87 4.11
323 324 5.129634 CCAGTTTTTGGCATTTTTAAGGGT 58.870 37.500 0.00 0.00 40.87 4.34
324 325 5.687770 CCAGTTTTTGGCATTTTTAAGGG 57.312 39.130 0.00 0.00 40.87 3.95
337 338 5.594926 AGAGTTGAGAAATGCCAGTTTTTG 58.405 37.500 0.00 0.00 0.00 2.44
338 339 5.859205 AGAGTTGAGAAATGCCAGTTTTT 57.141 34.783 0.00 0.00 0.00 1.94
339 340 5.859205 AAGAGTTGAGAAATGCCAGTTTT 57.141 34.783 0.00 0.00 0.00 2.43
340 341 6.959639 TTAAGAGTTGAGAAATGCCAGTTT 57.040 33.333 0.00 0.00 0.00 2.66
341 342 6.959639 TTTAAGAGTTGAGAAATGCCAGTT 57.040 33.333 0.00 0.00 0.00 3.16
342 343 6.547510 AGTTTTAAGAGTTGAGAAATGCCAGT 59.452 34.615 0.00 0.00 0.00 4.00
343 344 6.860023 CAGTTTTAAGAGTTGAGAAATGCCAG 59.140 38.462 0.00 0.00 0.00 4.85
344 345 6.735694 GCAGTTTTAAGAGTTGAGAAATGCCA 60.736 38.462 0.00 0.00 0.00 4.92
345 346 5.631096 GCAGTTTTAAGAGTTGAGAAATGCC 59.369 40.000 0.00 0.00 0.00 4.40
346 347 6.442112 AGCAGTTTTAAGAGTTGAGAAATGC 58.558 36.000 0.00 0.00 0.00 3.56
347 348 8.862550 AAAGCAGTTTTAAGAGTTGAGAAATG 57.137 30.769 0.00 0.00 0.00 2.32
360 361 7.345132 ACCCTTAAACCCTTAAAGCAGTTTTAA 59.655 33.333 2.57 2.57 38.57 1.52
361 362 6.840181 ACCCTTAAACCCTTAAAGCAGTTTTA 59.160 34.615 0.00 0.00 34.46 1.52
362 363 5.664006 ACCCTTAAACCCTTAAAGCAGTTTT 59.336 36.000 0.00 0.00 34.46 2.43
363 364 5.213519 ACCCTTAAACCCTTAAAGCAGTTT 58.786 37.500 0.00 0.00 36.47 2.66
364 365 4.811498 ACCCTTAAACCCTTAAAGCAGTT 58.189 39.130 0.00 0.00 0.00 3.16
365 366 4.464652 ACCCTTAAACCCTTAAAGCAGT 57.535 40.909 0.00 0.00 0.00 4.40
366 367 5.303333 TCAAACCCTTAAACCCTTAAAGCAG 59.697 40.000 0.00 0.00 0.00 4.24
367 368 5.209659 TCAAACCCTTAAACCCTTAAAGCA 58.790 37.500 0.00 0.00 0.00 3.91
368 369 5.279306 CCTCAAACCCTTAAACCCTTAAAGC 60.279 44.000 0.00 0.00 0.00 3.51
369 370 6.072649 TCCTCAAACCCTTAAACCCTTAAAG 58.927 40.000 0.00 0.00 0.00 1.85
370 371 6.028258 TCCTCAAACCCTTAAACCCTTAAA 57.972 37.500 0.00 0.00 0.00 1.52
371 372 5.666474 TCCTCAAACCCTTAAACCCTTAA 57.334 39.130 0.00 0.00 0.00 1.85
372 373 5.871324 ATCCTCAAACCCTTAAACCCTTA 57.129 39.130 0.00 0.00 0.00 2.69
373 374 4.759793 ATCCTCAAACCCTTAAACCCTT 57.240 40.909 0.00 0.00 0.00 3.95
374 375 4.357097 AGAATCCTCAAACCCTTAAACCCT 59.643 41.667 0.00 0.00 0.00 4.34
375 376 4.673968 AGAATCCTCAAACCCTTAAACCC 58.326 43.478 0.00 0.00 0.00 4.11
376 377 6.482524 AGTAGAATCCTCAAACCCTTAAACC 58.517 40.000 0.00 0.00 0.00 3.27
377 378 7.769507 CCTAGTAGAATCCTCAAACCCTTAAAC 59.230 40.741 0.00 0.00 0.00 2.01
378 379 7.092578 CCCTAGTAGAATCCTCAAACCCTTAAA 60.093 40.741 0.00 0.00 0.00 1.52
379 380 6.386050 CCCTAGTAGAATCCTCAAACCCTTAA 59.614 42.308 0.00 0.00 0.00 1.85
380 381 5.903589 CCCTAGTAGAATCCTCAAACCCTTA 59.096 44.000 0.00 0.00 0.00 2.69
381 382 4.722279 CCCTAGTAGAATCCTCAAACCCTT 59.278 45.833 0.00 0.00 0.00 3.95
382 383 4.015541 TCCCTAGTAGAATCCTCAAACCCT 60.016 45.833 0.00 0.00 0.00 4.34
383 384 4.296056 TCCCTAGTAGAATCCTCAAACCC 58.704 47.826 0.00 0.00 0.00 4.11
384 385 5.743422 GCATCCCTAGTAGAATCCTCAAACC 60.743 48.000 0.00 0.00 0.00 3.27
385 386 5.071115 AGCATCCCTAGTAGAATCCTCAAAC 59.929 44.000 0.00 0.00 0.00 2.93
386 387 5.219739 AGCATCCCTAGTAGAATCCTCAAA 58.780 41.667 0.00 0.00 0.00 2.69
387 388 4.820775 AGCATCCCTAGTAGAATCCTCAA 58.179 43.478 0.00 0.00 0.00 3.02
388 389 4.107149 AGAGCATCCCTAGTAGAATCCTCA 59.893 45.833 0.00 0.00 33.66 3.86
389 390 4.672899 AGAGCATCCCTAGTAGAATCCTC 58.327 47.826 0.00 0.00 33.66 3.71
390 391 4.757997 AGAGCATCCCTAGTAGAATCCT 57.242 45.455 0.00 0.00 33.66 3.24
391 392 6.249951 TCTAAGAGCATCCCTAGTAGAATCC 58.750 44.000 0.00 0.00 33.66 3.01
392 393 7.309560 GGTTCTAAGAGCATCCCTAGTAGAATC 60.310 44.444 0.00 0.00 34.28 2.52
393 394 6.495526 GGTTCTAAGAGCATCCCTAGTAGAAT 59.504 42.308 0.00 0.00 34.28 2.40
394 395 5.834204 GGTTCTAAGAGCATCCCTAGTAGAA 59.166 44.000 0.00 0.00 33.66 2.10
395 396 5.103643 TGGTTCTAAGAGCATCCCTAGTAGA 60.104 44.000 0.00 0.00 33.66 2.59
396 397 5.141182 TGGTTCTAAGAGCATCCCTAGTAG 58.859 45.833 0.00 0.00 33.66 2.57
397 398 5.138758 TGGTTCTAAGAGCATCCCTAGTA 57.861 43.478 0.00 0.00 33.66 1.82
398 399 3.964031 CTGGTTCTAAGAGCATCCCTAGT 59.036 47.826 0.00 0.00 33.66 2.57
399 400 3.244044 GCTGGTTCTAAGAGCATCCCTAG 60.244 52.174 0.00 0.00 33.66 3.02
400 401 2.700897 GCTGGTTCTAAGAGCATCCCTA 59.299 50.000 0.00 0.00 33.66 3.53
401 402 1.488393 GCTGGTTCTAAGAGCATCCCT 59.512 52.381 0.00 0.00 33.66 4.20
402 403 1.210478 TGCTGGTTCTAAGAGCATCCC 59.790 52.381 0.00 0.00 37.81 3.85
403 404 2.698855 TGCTGGTTCTAAGAGCATCC 57.301 50.000 0.00 0.00 37.81 3.51
404 405 2.941720 CCTTGCTGGTTCTAAGAGCATC 59.058 50.000 0.00 0.00 42.17 3.91
405 406 2.943199 GCCTTGCTGGTTCTAAGAGCAT 60.943 50.000 0.00 0.00 42.17 3.79
406 407 1.611673 GCCTTGCTGGTTCTAAGAGCA 60.612 52.381 0.00 0.00 40.94 4.26
407 408 1.090728 GCCTTGCTGGTTCTAAGAGC 58.909 55.000 0.00 0.00 38.35 4.09
427 428 1.373497 AGTGTGAGCAGTGTAGCGC 60.373 57.895 0.00 0.00 40.15 5.92
454 461 1.449246 GGCTGCTAGTGCTGGTCAG 60.449 63.158 0.00 0.00 40.48 3.51
602 622 2.825836 GGTTGCCAGATGGAGCGG 60.826 66.667 2.18 0.00 37.39 5.52
647 671 3.426695 CCGCACTGGAGCTTAATTCAAAG 60.427 47.826 0.00 0.00 42.00 2.77
787 850 3.560251 AGGTCAGCACCAACGGCT 61.560 61.111 0.00 0.00 46.68 5.52
896 959 1.642952 GCTCTGCTAGTGCTGGTTGC 61.643 60.000 0.00 0.00 40.48 4.17
897 960 1.357258 CGCTCTGCTAGTGCTGGTTG 61.357 60.000 0.00 0.00 40.48 3.77
898 961 1.079543 CGCTCTGCTAGTGCTGGTT 60.080 57.895 0.00 0.00 40.48 3.67
1173 1254 3.812019 TCGAAGGAGAGCCGCGAC 61.812 66.667 8.23 0.00 39.65 5.19
1386 1541 2.760385 AGGCGGCAGAGGTAGACC 60.760 66.667 13.08 0.00 0.00 3.85
1752 2380 0.796870 CGCGTATCAGCACGTTCTCA 60.797 55.000 0.00 0.00 43.79 3.27
1884 2577 1.115930 AGCGTATCGGGAAGCAGGAT 61.116 55.000 0.00 0.00 0.00 3.24
1902 2595 4.680237 TGCCTCCGCCGTGTGAAG 62.680 66.667 0.00 0.00 0.00 3.02
1977 2678 2.427905 CCGACGAACGAGCACGAA 60.428 61.111 11.40 0.00 45.77 3.85
2400 3111 4.287781 TTCGTGTCCGGCTTGCGA 62.288 61.111 0.00 0.82 33.95 5.10
2455 3173 2.572284 CGTTGACTCGGGGAGGAC 59.428 66.667 0.00 0.00 33.35 3.85
2456 3174 3.379445 GCGTTGACTCGGGGAGGA 61.379 66.667 0.00 0.00 33.35 3.71
2606 3342 1.518325 TTGTACAACGATGCACTGGG 58.482 50.000 3.59 0.00 0.00 4.45
2692 3437 6.343716 TGACAAGTGTAACCTCGGTAATTA 57.656 37.500 0.00 0.00 37.80 1.40
2694 3439 4.817517 CTGACAAGTGTAACCTCGGTAAT 58.182 43.478 0.00 0.00 37.80 1.89
2698 3443 1.270094 TGCTGACAAGTGTAACCTCGG 60.270 52.381 0.00 0.00 37.80 4.63
2722 3467 0.942252 GATTAAGCCGCGGGTTTAGG 59.058 55.000 43.13 10.12 37.08 2.69
2731 3476 3.782889 AAAATGGAGTGATTAAGCCGC 57.217 42.857 0.00 0.00 0.00 6.53
2760 3506 9.319143 GGAGTATACTACTACTACGTGAAGAAA 57.681 37.037 7.95 0.00 39.59 2.52
2777 3523 8.954834 TGCTAGAGTAGTACTAGGAGTATACT 57.045 38.462 4.68 4.68 38.11 2.12
2778 3524 9.995003 TTTGCTAGAGTAGTACTAGGAGTATAC 57.005 37.037 1.87 0.00 38.91 1.47
2780 3526 8.716779 ACTTTGCTAGAGTAGTACTAGGAGTAT 58.283 37.037 1.87 0.00 38.91 2.12
2781 3527 7.986320 CACTTTGCTAGAGTAGTACTAGGAGTA 59.014 40.741 1.87 0.00 38.91 2.59
2782 3528 6.824704 CACTTTGCTAGAGTAGTACTAGGAGT 59.175 42.308 1.87 0.00 38.91 3.85
2783 3529 6.238538 GCACTTTGCTAGAGTAGTACTAGGAG 60.239 46.154 1.87 2.30 40.96 3.69
2784 3530 5.589452 GCACTTTGCTAGAGTAGTACTAGGA 59.411 44.000 1.87 0.00 40.96 2.94
2785 3531 5.357314 TGCACTTTGCTAGAGTAGTACTAGG 59.643 44.000 1.87 0.00 45.31 3.02
2786 3532 6.316640 TCTGCACTTTGCTAGAGTAGTACTAG 59.683 42.308 1.87 0.00 45.31 2.57
2787 3533 6.178324 TCTGCACTTTGCTAGAGTAGTACTA 58.822 40.000 1.88 0.00 45.31 1.82
2788 3534 5.010933 TCTGCACTTTGCTAGAGTAGTACT 58.989 41.667 1.37 1.37 45.31 2.73
2789 3535 5.312120 TCTGCACTTTGCTAGAGTAGTAC 57.688 43.478 0.00 0.00 45.31 2.73
2790 3536 4.142359 GCTCTGCACTTTGCTAGAGTAGTA 60.142 45.833 19.59 0.00 45.31 1.82
2791 3537 3.367910 GCTCTGCACTTTGCTAGAGTAGT 60.368 47.826 19.59 0.00 45.31 2.73
2792 3538 3.186119 GCTCTGCACTTTGCTAGAGTAG 58.814 50.000 19.59 3.28 45.31 2.57
2793 3539 2.562738 TGCTCTGCACTTTGCTAGAGTA 59.437 45.455 19.59 15.70 45.31 2.59
2794 3540 1.345741 TGCTCTGCACTTTGCTAGAGT 59.654 47.619 19.59 0.00 45.31 3.24
2795 3541 2.090400 TGCTCTGCACTTTGCTAGAG 57.910 50.000 16.69 16.69 45.31 2.43
2796 3542 2.549064 TTGCTCTGCACTTTGCTAGA 57.451 45.000 0.00 0.82 45.31 2.43
2797 3543 3.844577 AATTGCTCTGCACTTTGCTAG 57.155 42.857 0.00 0.00 45.31 3.42
2798 3544 4.156556 CCTTAATTGCTCTGCACTTTGCTA 59.843 41.667 0.00 0.00 45.31 3.49
2799 3545 3.057033 CCTTAATTGCTCTGCACTTTGCT 60.057 43.478 0.00 0.00 45.31 3.91
2800 3546 3.057315 TCCTTAATTGCTCTGCACTTTGC 60.057 43.478 0.84 0.00 45.29 3.68
2801 3547 4.771590 TCCTTAATTGCTCTGCACTTTG 57.228 40.909 0.84 0.00 38.71 2.77
2802 3548 4.320494 CGTTCCTTAATTGCTCTGCACTTT 60.320 41.667 0.84 0.00 38.71 2.66
2803 3549 3.189287 CGTTCCTTAATTGCTCTGCACTT 59.811 43.478 0.00 0.00 38.71 3.16
2804 3550 2.744202 CGTTCCTTAATTGCTCTGCACT 59.256 45.455 0.00 0.00 38.71 4.40
2805 3551 2.484264 ACGTTCCTTAATTGCTCTGCAC 59.516 45.455 0.00 0.00 38.71 4.57
2806 3552 2.483877 CACGTTCCTTAATTGCTCTGCA 59.516 45.455 0.00 0.00 36.47 4.41
2807 3553 2.484264 ACACGTTCCTTAATTGCTCTGC 59.516 45.455 0.00 0.00 0.00 4.26
2808 3554 3.498397 ACACACGTTCCTTAATTGCTCTG 59.502 43.478 0.00 0.00 0.00 3.35
2809 3555 3.498397 CACACACGTTCCTTAATTGCTCT 59.502 43.478 0.00 0.00 0.00 4.09
2810 3556 3.250040 ACACACACGTTCCTTAATTGCTC 59.750 43.478 0.00 0.00 0.00 4.26
2811 3557 3.003275 CACACACACGTTCCTTAATTGCT 59.997 43.478 0.00 0.00 0.00 3.91
2812 3558 3.296628 CACACACACGTTCCTTAATTGC 58.703 45.455 0.00 0.00 0.00 3.56
2813 3559 3.562141 TCCACACACACGTTCCTTAATTG 59.438 43.478 0.00 0.00 0.00 2.32
2814 3560 3.811083 TCCACACACACGTTCCTTAATT 58.189 40.909 0.00 0.00 0.00 1.40
2815 3561 3.181458 ACTCCACACACACGTTCCTTAAT 60.181 43.478 0.00 0.00 0.00 1.40
2816 3562 2.168936 ACTCCACACACACGTTCCTTAA 59.831 45.455 0.00 0.00 0.00 1.85
2817 3563 1.758280 ACTCCACACACACGTTCCTTA 59.242 47.619 0.00 0.00 0.00 2.69
2818 3564 0.539986 ACTCCACACACACGTTCCTT 59.460 50.000 0.00 0.00 0.00 3.36
2819 3565 0.179084 CACTCCACACACACGTTCCT 60.179 55.000 0.00 0.00 0.00 3.36
2820 3566 1.772063 GCACTCCACACACACGTTCC 61.772 60.000 0.00 0.00 0.00 3.62
2821 3567 1.087202 TGCACTCCACACACACGTTC 61.087 55.000 0.00 0.00 0.00 3.95
2822 3568 1.078778 TGCACTCCACACACACGTT 60.079 52.632 0.00 0.00 0.00 3.99
2823 3569 1.521457 CTGCACTCCACACACACGT 60.521 57.895 0.00 0.00 0.00 4.49
2824 3570 1.521457 ACTGCACTCCACACACACG 60.521 57.895 0.00 0.00 0.00 4.49
2825 3571 0.461870 TCACTGCACTCCACACACAC 60.462 55.000 0.00 0.00 0.00 3.82
2826 3572 0.251634 TTCACTGCACTCCACACACA 59.748 50.000 0.00 0.00 0.00 3.72
2903 3649 5.705441 CACTACCACATCATTAACACACCTT 59.295 40.000 0.00 0.00 0.00 3.50
2993 3739 1.407656 AAGGGACAGGTCAACGAGCA 61.408 55.000 1.41 0.00 31.89 4.26
3042 3788 2.346766 GGCCACATCATATGGACACA 57.653 50.000 0.00 0.00 45.59 3.72
3082 3828 0.602905 CTCCACAAACCCGACTCACC 60.603 60.000 0.00 0.00 0.00 4.02
3089 3835 1.170290 GGAACCACTCCACAAACCCG 61.170 60.000 0.00 0.00 44.67 5.28
3108 3854 5.862924 TTCAGTAAAATTCCTGAGAAGCG 57.137 39.130 0.00 0.00 38.81 4.68
3121 3867 9.691362 GCAACTCAGGAATATTTTTCAGTAAAA 57.309 29.630 0.00 0.00 39.88 1.52
3122 3868 8.020819 CGCAACTCAGGAATATTTTTCAGTAAA 58.979 33.333 0.00 0.00 0.00 2.01
3129 4015 5.220854 CCGATCGCAACTCAGGAATATTTTT 60.221 40.000 10.32 0.00 0.00 1.94
3147 4033 0.873312 CAGCATCTGTGTCCCGATCG 60.873 60.000 8.51 8.51 0.00 3.69
3151 4037 0.798776 GAAACAGCATCTGTGTCCCG 59.201 55.000 5.97 0.00 44.62 5.14
3154 4040 0.166814 GCGGAAACAGCATCTGTGTC 59.833 55.000 8.29 8.29 44.62 3.67
3155 4041 1.237285 GGCGGAAACAGCATCTGTGT 61.237 55.000 0.00 0.00 44.62 3.72
3156 4042 0.957395 AGGCGGAAACAGCATCTGTG 60.957 55.000 0.00 0.00 44.62 3.66
3158 4044 0.674581 TCAGGCGGAAACAGCATCTG 60.675 55.000 0.00 0.00 37.52 2.90
3159 4045 0.392193 CTCAGGCGGAAACAGCATCT 60.392 55.000 0.00 0.00 36.08 2.90
3161 4047 0.957395 CACTCAGGCGGAAACAGCAT 60.957 55.000 0.00 0.00 36.08 3.79
3162 4048 1.597854 CACTCAGGCGGAAACAGCA 60.598 57.895 0.00 0.00 36.08 4.41
3163 4049 0.320421 TACACTCAGGCGGAAACAGC 60.320 55.000 0.00 0.00 0.00 4.40
3165 4051 1.000506 GACTACACTCAGGCGGAAACA 59.999 52.381 0.00 0.00 0.00 2.83
3166 4052 1.672145 GGACTACACTCAGGCGGAAAC 60.672 57.143 0.00 0.00 0.00 2.78
3167 4053 0.606604 GGACTACACTCAGGCGGAAA 59.393 55.000 0.00 0.00 0.00 3.13
3168 4054 1.255667 GGGACTACACTCAGGCGGAA 61.256 60.000 0.00 0.00 0.00 4.30
3170 4056 2.722201 GGGGACTACACTCAGGCGG 61.722 68.421 0.00 0.00 0.00 6.13
3171 4057 2.893398 GGGGACTACACTCAGGCG 59.107 66.667 0.00 0.00 0.00 5.52
3172 4058 2.893398 CGGGGACTACACTCAGGC 59.107 66.667 0.00 0.00 0.00 4.85
3173 4059 1.258445 AAGCGGGGACTACACTCAGG 61.258 60.000 0.00 0.00 0.00 3.86
3257 4168 1.005137 CGCGCAAAAGCAAACAAACAT 60.005 42.857 8.75 0.00 36.85 2.71


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.