Multiple sequence alignment - TraesCS5D01G043500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G043500 chr5D 100.000 4495 0 0 1 4495 42929408 42933902 0.000000e+00 8301.0
1 TraesCS5D01G043500 chr5D 83.058 2243 326 39 1294 3502 42951029 42953251 0.000000e+00 1988.0
2 TraesCS5D01G043500 chr5D 85.143 1225 168 6 2316 3530 42946003 42947223 0.000000e+00 1242.0
3 TraesCS5D01G043500 chr5D 81.950 1036 163 12 1277 2304 42944938 42945957 0.000000e+00 856.0
4 TraesCS5D01G043500 chr5D 78.947 988 196 7 2393 3380 541953446 541952471 0.000000e+00 662.0
5 TraesCS5D01G043500 chr5A 95.581 3598 118 10 1 3577 32709480 32713057 0.000000e+00 5725.0
6 TraesCS5D01G043500 chr5A 81.448 663 112 5 2882 3534 32735561 32736222 2.380000e-147 532.0
7 TraesCS5D01G043500 chr5A 81.450 469 63 19 4043 4495 520381723 520382183 3.310000e-96 363.0
8 TraesCS5D01G043500 chr5A 79.418 447 67 21 4058 4485 699688049 699687609 4.400000e-75 292.0
9 TraesCS5D01G043500 chr5A 80.049 411 59 19 4058 4451 699609684 699609280 2.650000e-72 283.0
10 TraesCS5D01G043500 chr5A 88.060 134 16 0 1823 1956 32745897 32746030 4.650000e-35 159.0
11 TraesCS5D01G043500 chr5A 81.967 183 23 9 3939 4114 65978452 65978631 3.620000e-31 147.0
12 TraesCS5D01G043500 chr5A 76.087 138 30 3 667 803 32724193 32724328 8.070000e-08 69.4
13 TraesCS5D01G043500 chr5B 96.658 1975 58 4 1 1971 38161207 38159237 0.000000e+00 3275.0
14 TraesCS5D01G043500 chr5B 96.854 1462 46 0 1970 3431 38159143 38157682 0.000000e+00 2446.0
15 TraesCS5D01G043500 chr5B 83.429 1044 155 10 2503 3530 38134793 38133752 0.000000e+00 953.0
16 TraesCS5D01G043500 chr5B 85.271 903 132 1 2488 3389 38050613 38049711 0.000000e+00 929.0
17 TraesCS5D01G043500 chr5B 86.494 385 48 4 2479 2861 38127787 38127405 1.930000e-113 420.0
18 TraesCS5D01G043500 chr5B 80.325 554 81 16 3945 4485 395611561 395611023 1.170000e-105 394.0
19 TraesCS5D01G043500 chr5B 79.921 508 88 11 1984 2484 38133157 38132657 1.190000e-95 361.0
20 TraesCS5D01G043500 chr5B 81.884 414 62 6 1898 2304 38147790 38147383 2.000000e-88 337.0
21 TraesCS5D01G043500 chr5B 85.398 226 22 8 3722 3943 636342845 636342627 1.630000e-54 224.0
22 TraesCS5D01G043500 chr5B 77.215 158 32 3 667 821 38150640 38150484 6.190000e-14 89.8
23 TraesCS5D01G043500 chr5B 82.203 118 4 8 3477 3577 38157684 38157567 8.010000e-13 86.1
24 TraesCS5D01G043500 chr5B 83.951 81 10 3 3939 4018 248655446 248655524 1.730000e-09 75.0
25 TraesCS5D01G043500 chr4A 79.131 1059 204 10 2323 3380 627357355 627358397 0.000000e+00 715.0
26 TraesCS5D01G043500 chr4A 81.093 439 78 5 2323 2759 627377672 627378107 3.330000e-91 346.0
27 TraesCS5D01G043500 chr4A 72.664 856 196 30 1112 1948 627360366 627361202 2.680000e-62 250.0
28 TraesCS5D01G043500 chr4D 81.174 579 69 31 3944 4495 55235341 55234776 3.210000e-116 429.0
29 TraesCS5D01G043500 chr4D 87.805 205 17 8 3779 3978 333771906 333771705 2.700000e-57 233.0
30 TraesCS5D01G043500 chr4D 74.460 556 84 34 3948 4485 70996604 70996089 2.130000e-43 187.0
31 TraesCS5D01G043500 chr2B 82.426 404 42 18 4106 4495 494739577 494739965 4.340000e-85 326.0
32 TraesCS5D01G043500 chr2B 91.444 187 13 3 3779 3963 174794822 174795007 2.080000e-63 254.0
33 TraesCS5D01G043500 chr2B 91.667 180 12 2 3765 3943 28427161 28427338 3.470000e-61 246.0
34 TraesCS5D01G043500 chr2B 87.097 186 12 8 3595 3768 763804754 763804569 2.740000e-47 200.0
35 TraesCS5D01G043500 chr1A 81.370 365 44 18 4127 4485 357183234 357182888 4.430000e-70 276.0
36 TraesCS5D01G043500 chr7A 79.137 417 61 18 4087 4495 671496389 671495991 9.590000e-67 265.0
37 TraesCS5D01G043500 chr7A 77.132 516 65 26 3944 4441 29843179 29843659 2.680000e-62 250.0
38 TraesCS5D01G043500 chr7A 85.027 187 19 6 3603 3781 165445490 165445305 9.930000e-42 182.0
39 TraesCS5D01G043500 chr7A 84.615 78 9 3 3942 4018 577489559 577489484 1.730000e-09 75.0
40 TraesCS5D01G043500 chr3A 95.210 167 7 1 3777 3942 744441340 744441174 3.450000e-66 263.0
41 TraesCS5D01G043500 chr1D 93.143 175 11 1 3771 3944 198055676 198055850 5.770000e-64 255.0
42 TraesCS5D01G043500 chr1D 86.486 185 17 4 3603 3779 493735511 493735327 3.550000e-46 196.0
43 TraesCS5D01G043500 chr1D 77.032 283 50 10 3945 4217 2578910 2578633 1.010000e-31 148.0
44 TraesCS5D01G043500 chr2D 93.103 174 11 1 3771 3943 24312365 24312192 2.080000e-63 254.0
45 TraesCS5D01G043500 chr2D 91.257 183 11 4 3762 3942 560959664 560959485 1.250000e-60 244.0
46 TraesCS5D01G043500 chr2D 84.112 214 21 8 3577 3778 468174698 468174486 1.280000e-45 195.0
47 TraesCS5D01G043500 chr2D 90.714 140 10 3 4105 4243 624794892 624794755 2.760000e-42 183.0
48 TraesCS5D01G043500 chr2D 84.737 190 19 9 3603 3783 647436043 647435855 9.930000e-42 182.0
49 TraesCS5D01G043500 chr7D 89.175 194 19 2 3770 3961 513817912 513817719 1.620000e-59 241.0
50 TraesCS5D01G043500 chr6D 86.188 181 16 5 3605 3778 324558219 324558397 2.130000e-43 187.0
51 TraesCS5D01G043500 chr6D 85.635 181 16 5 3606 3778 460390066 460389888 9.930000e-42 182.0
52 TraesCS5D01G043500 chr7B 83.099 213 21 8 3578 3778 69822329 69822538 3.570000e-41 180.0
53 TraesCS5D01G043500 chr3D 85.165 182 19 4 3606 3781 580329740 580329561 3.570000e-41 180.0
54 TraesCS5D01G043500 chr6A 83.951 81 10 3 3939 4018 214807077 214807155 1.730000e-09 75.0
55 TraesCS5D01G043500 chr6A 84.615 65 10 0 3091 3155 598056851 598056787 1.040000e-06 65.8
56 TraesCS5D01G043500 chr6B 85.484 62 9 0 3088 3149 687100455 687100394 1.040000e-06 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G043500 chr5D 42929408 42933902 4494 False 8301.0 8301 100.000000 1 4495 1 chr5D.!!$F1 4494
1 TraesCS5D01G043500 chr5D 42944938 42953251 8313 False 1362.0 1988 83.383667 1277 3530 3 chr5D.!!$F2 2253
2 TraesCS5D01G043500 chr5D 541952471 541953446 975 True 662.0 662 78.947000 2393 3380 1 chr5D.!!$R1 987
3 TraesCS5D01G043500 chr5A 32709480 32713057 3577 False 5725.0 5725 95.581000 1 3577 1 chr5A.!!$F1 3576
4 TraesCS5D01G043500 chr5A 32735561 32736222 661 False 532.0 532 81.448000 2882 3534 1 chr5A.!!$F3 652
5 TraesCS5D01G043500 chr5B 38157567 38161207 3640 True 1935.7 3275 91.905000 1 3577 3 chr5B.!!$R7 3576
6 TraesCS5D01G043500 chr5B 38049711 38050613 902 True 929.0 929 85.271000 2488 3389 1 chr5B.!!$R1 901
7 TraesCS5D01G043500 chr5B 38132657 38134793 2136 True 657.0 953 81.675000 1984 3530 2 chr5B.!!$R5 1546
8 TraesCS5D01G043500 chr5B 395611023 395611561 538 True 394.0 394 80.325000 3945 4485 1 chr5B.!!$R3 540
9 TraesCS5D01G043500 chr5B 38147383 38150640 3257 True 213.4 337 79.549500 667 2304 2 chr5B.!!$R6 1637
10 TraesCS5D01G043500 chr4A 627357355 627361202 3847 False 482.5 715 75.897500 1112 3380 2 chr4A.!!$F2 2268
11 TraesCS5D01G043500 chr4D 55234776 55235341 565 True 429.0 429 81.174000 3944 4495 1 chr4D.!!$R1 551

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
52 53 1.209504 TGGGACTTGGAAGCCGAATAG 59.790 52.381 0.00 0.00 0.00 1.73 F
164 165 2.227388 GGAGCATGTGGTTTCTTCACAG 59.773 50.000 0.00 0.00 46.49 3.66 F
2007 3854 3.125146 TGACTTATCTGATTGCGTGCAAC 59.875 43.478 9.79 4.99 38.88 4.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1908 3654 0.382158 GGTAGGCGTTACCCTCGTAC 59.618 60.000 6.93 0.0 45.25 3.67 R
2095 3942 2.094649 CGGAGTGTTAAGACAGACTCCC 60.095 54.545 10.55 0.0 42.14 4.30 R
3637 11774 0.823460 TGTATCTCGGTGATGCAGCA 59.177 50.000 0.00 0.0 41.66 4.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
52 53 1.209504 TGGGACTTGGAAGCCGAATAG 59.790 52.381 0.00 0.00 0.00 1.73
109 110 6.069331 CCTATCTAGCTCCAAACAGGTACTA 58.931 44.000 0.00 0.00 36.02 1.82
139 140 9.609346 GGTCCTCATAAGCTAATGTTAGTAAAA 57.391 33.333 0.00 0.00 33.32 1.52
164 165 2.227388 GGAGCATGTGGTTTCTTCACAG 59.773 50.000 0.00 0.00 46.49 3.66
246 247 8.277490 TCGTCTTGAAGACTTTAGAGCTATAA 57.723 34.615 21.61 0.00 42.92 0.98
297 306 5.483811 TCTACTTCTGAAAACACACACACA 58.516 37.500 0.00 0.00 0.00 3.72
298 307 4.419522 ACTTCTGAAAACACACACACAC 57.580 40.909 0.00 0.00 0.00 3.82
299 308 3.818210 ACTTCTGAAAACACACACACACA 59.182 39.130 0.00 0.00 0.00 3.72
300 309 3.822594 TCTGAAAACACACACACACAC 57.177 42.857 0.00 0.00 0.00 3.82
301 310 3.142174 TCTGAAAACACACACACACACA 58.858 40.909 0.00 0.00 0.00 3.72
302 311 3.755905 TCTGAAAACACACACACACACAT 59.244 39.130 0.00 0.00 0.00 3.21
303 312 4.938226 TCTGAAAACACACACACACACATA 59.062 37.500 0.00 0.00 0.00 2.29
304 313 5.588246 TCTGAAAACACACACACACACATAT 59.412 36.000 0.00 0.00 0.00 1.78
305 314 6.763610 TCTGAAAACACACACACACACATATA 59.236 34.615 0.00 0.00 0.00 0.86
306 315 7.443879 TCTGAAAACACACACACACACATATAT 59.556 33.333 0.00 0.00 0.00 0.86
644 658 5.250774 AGGCTTTGACTCACTATTTAAGGGA 59.749 40.000 0.00 0.00 35.83 4.20
1908 3654 4.064768 TGCCATTGCTCCCCTGGG 62.065 66.667 5.50 5.50 38.71 4.45
1975 3822 9.863650 ACTACTGTACTTGTAGGTCATACATAT 57.136 33.333 21.66 0.00 43.87 1.78
2007 3854 3.125146 TGACTTATCTGATTGCGTGCAAC 59.875 43.478 9.79 4.99 38.88 4.17
2382 4269 2.939103 GTGATAATATCCTCGGCATGCC 59.061 50.000 27.67 27.67 0.00 4.40
2441 4328 6.311690 GGAAGGAGAAAGACGAGTATTTCAAG 59.688 42.308 20.73 0.00 41.69 3.02
2511 4398 3.607310 CGATACTGTCCGCATACTCACTC 60.607 52.174 0.00 0.00 0.00 3.51
2552 4439 3.489785 CCACTGACAACTACAACGAAGAC 59.510 47.826 0.00 0.00 0.00 3.01
2964 4857 4.492160 TCGACGATCAGCGCCACC 62.492 66.667 2.29 0.00 46.04 4.61
3460 11580 2.325082 CGCCGGTGGTTCTTCCTTG 61.325 63.158 7.26 0.00 37.07 3.61
3564 11701 3.006323 TGTGTTTGTGGGATTTGTATGGC 59.994 43.478 0.00 0.00 0.00 4.40
3577 11714 5.690997 TTTGTATGGCGTGTTTATGTGAA 57.309 34.783 0.00 0.00 0.00 3.18
3578 11715 5.690997 TTGTATGGCGTGTTTATGTGAAA 57.309 34.783 0.00 0.00 0.00 2.69
3579 11716 5.888691 TGTATGGCGTGTTTATGTGAAAT 57.111 34.783 0.00 0.00 0.00 2.17
3580 11717 6.260870 TGTATGGCGTGTTTATGTGAAATT 57.739 33.333 0.00 0.00 0.00 1.82
3581 11718 7.379098 TGTATGGCGTGTTTATGTGAAATTA 57.621 32.000 0.00 0.00 0.00 1.40
3582 11719 7.468441 TGTATGGCGTGTTTATGTGAAATTAG 58.532 34.615 0.00 0.00 0.00 1.73
3583 11720 4.728534 TGGCGTGTTTATGTGAAATTAGC 58.271 39.130 0.00 0.00 0.00 3.09
3584 11721 4.216472 TGGCGTGTTTATGTGAAATTAGCA 59.784 37.500 0.00 0.00 0.00 3.49
3585 11722 5.157781 GGCGTGTTTATGTGAAATTAGCAA 58.842 37.500 0.00 0.00 0.00 3.91
3586 11723 5.631512 GGCGTGTTTATGTGAAATTAGCAAA 59.368 36.000 0.00 0.00 0.00 3.68
3587 11724 6.144724 GGCGTGTTTATGTGAAATTAGCAAAA 59.855 34.615 0.00 0.00 0.00 2.44
3588 11725 7.219922 GCGTGTTTATGTGAAATTAGCAAAAG 58.780 34.615 0.00 0.00 0.00 2.27
3589 11726 7.619161 GCGTGTTTATGTGAAATTAGCAAAAGG 60.619 37.037 0.00 0.00 0.00 3.11
3590 11727 7.593273 CGTGTTTATGTGAAATTAGCAAAAGGA 59.407 33.333 0.00 0.00 0.00 3.36
3591 11728 8.699749 GTGTTTATGTGAAATTAGCAAAAGGAC 58.300 33.333 0.00 0.00 0.00 3.85
3592 11729 7.870445 TGTTTATGTGAAATTAGCAAAAGGACC 59.130 33.333 0.00 0.00 0.00 4.46
3593 11730 4.864704 TGTGAAATTAGCAAAAGGACCC 57.135 40.909 0.00 0.00 0.00 4.46
3594 11731 3.254657 TGTGAAATTAGCAAAAGGACCCG 59.745 43.478 0.00 0.00 0.00 5.28
3595 11732 3.504520 GTGAAATTAGCAAAAGGACCCGA 59.495 43.478 0.00 0.00 0.00 5.14
3596 11733 4.022676 GTGAAATTAGCAAAAGGACCCGAA 60.023 41.667 0.00 0.00 0.00 4.30
3597 11734 4.585162 TGAAATTAGCAAAAGGACCCGAAA 59.415 37.500 0.00 0.00 0.00 3.46
3598 11735 5.245075 TGAAATTAGCAAAAGGACCCGAAAT 59.755 36.000 0.00 0.00 0.00 2.17
3599 11736 4.718940 ATTAGCAAAAGGACCCGAAATG 57.281 40.909 0.00 0.00 0.00 2.32
3600 11737 1.256812 AGCAAAAGGACCCGAAATGG 58.743 50.000 0.00 0.00 37.55 3.16
3601 11738 1.203001 AGCAAAAGGACCCGAAATGGA 60.203 47.619 0.00 0.00 42.00 3.41
3602 11739 1.616374 GCAAAAGGACCCGAAATGGAA 59.384 47.619 0.00 0.00 42.00 3.53
3603 11740 2.352715 GCAAAAGGACCCGAAATGGAAG 60.353 50.000 0.00 0.00 42.00 3.46
3604 11741 3.153919 CAAAAGGACCCGAAATGGAAGA 58.846 45.455 0.00 0.00 42.00 2.87
3605 11742 3.518992 AAAGGACCCGAAATGGAAGAA 57.481 42.857 0.00 0.00 42.00 2.52
3606 11743 3.518992 AAGGACCCGAAATGGAAGAAA 57.481 42.857 0.00 0.00 42.00 2.52
3607 11744 3.518992 AGGACCCGAAATGGAAGAAAA 57.481 42.857 0.00 0.00 42.00 2.29
3608 11745 3.839778 AGGACCCGAAATGGAAGAAAAA 58.160 40.909 0.00 0.00 42.00 1.94
3633 11770 8.481492 AAAATCATAATCTGGCCATGATTACA 57.519 30.769 24.79 18.82 44.59 2.41
3634 11771 8.660295 AAATCATAATCTGGCCATGATTACAT 57.340 30.769 24.79 19.75 44.59 2.29
3635 11772 8.660295 AATCATAATCTGGCCATGATTACATT 57.340 30.769 26.42 23.49 43.91 2.71
3636 11773 8.660295 ATCATAATCTGGCCATGATTACATTT 57.340 30.769 26.42 15.58 38.64 2.32
3637 11774 8.481492 TCATAATCTGGCCATGATTACATTTT 57.519 30.769 26.42 15.33 38.64 1.82
3638 11775 8.361889 TCATAATCTGGCCATGATTACATTTTG 58.638 33.333 26.42 21.90 38.64 2.44
3639 11776 4.389890 TCTGGCCATGATTACATTTTGC 57.610 40.909 5.51 0.00 34.15 3.68
3640 11777 4.025360 TCTGGCCATGATTACATTTTGCT 58.975 39.130 5.51 0.00 34.15 3.91
3641 11778 4.116961 CTGGCCATGATTACATTTTGCTG 58.883 43.478 5.51 0.00 34.15 4.41
3642 11779 2.867975 GGCCATGATTACATTTTGCTGC 59.132 45.455 0.00 0.00 34.15 5.25
3643 11780 3.523547 GCCATGATTACATTTTGCTGCA 58.476 40.909 0.00 0.00 34.15 4.41
3644 11781 4.124238 GCCATGATTACATTTTGCTGCAT 58.876 39.130 1.84 0.00 34.15 3.96
3645 11782 4.210537 GCCATGATTACATTTTGCTGCATC 59.789 41.667 1.84 0.00 34.15 3.91
3646 11783 5.353111 CCATGATTACATTTTGCTGCATCA 58.647 37.500 1.84 1.56 34.15 3.07
3647 11784 5.233476 CCATGATTACATTTTGCTGCATCAC 59.767 40.000 1.84 0.00 34.15 3.06
3648 11785 4.746729 TGATTACATTTTGCTGCATCACC 58.253 39.130 1.84 0.00 0.00 4.02
3649 11786 2.917701 TACATTTTGCTGCATCACCG 57.082 45.000 1.84 0.00 0.00 4.94
3650 11787 1.246649 ACATTTTGCTGCATCACCGA 58.753 45.000 1.84 0.00 0.00 4.69
3651 11788 1.200716 ACATTTTGCTGCATCACCGAG 59.799 47.619 1.84 0.00 0.00 4.63
3652 11789 1.469703 CATTTTGCTGCATCACCGAGA 59.530 47.619 1.84 0.00 0.00 4.04
3653 11790 1.825090 TTTTGCTGCATCACCGAGAT 58.175 45.000 1.84 0.00 37.48 2.75
3654 11791 2.689553 TTTGCTGCATCACCGAGATA 57.310 45.000 1.84 0.00 34.43 1.98
3655 11792 1.939974 TTGCTGCATCACCGAGATAC 58.060 50.000 1.84 0.00 34.43 2.24
3656 11793 0.823460 TGCTGCATCACCGAGATACA 59.177 50.000 0.00 0.00 34.43 2.29
3657 11794 1.212616 GCTGCATCACCGAGATACAC 58.787 55.000 0.00 0.00 34.43 2.90
3658 11795 1.202463 GCTGCATCACCGAGATACACT 60.202 52.381 0.00 0.00 34.43 3.55
3659 11796 2.034685 GCTGCATCACCGAGATACACTA 59.965 50.000 0.00 0.00 34.43 2.74
3660 11797 3.305676 GCTGCATCACCGAGATACACTAT 60.306 47.826 0.00 0.00 34.43 2.12
3661 11798 4.480541 CTGCATCACCGAGATACACTATC 58.519 47.826 0.00 0.00 34.43 2.08
3662 11799 3.888930 TGCATCACCGAGATACACTATCA 59.111 43.478 0.00 0.00 37.65 2.15
3663 11800 4.230657 GCATCACCGAGATACACTATCAC 58.769 47.826 0.00 0.00 37.65 3.06
3664 11801 4.022762 GCATCACCGAGATACACTATCACT 60.023 45.833 0.00 0.00 37.65 3.41
3665 11802 5.694816 CATCACCGAGATACACTATCACTC 58.305 45.833 0.00 0.00 37.65 3.51
3666 11803 5.037383 TCACCGAGATACACTATCACTCT 57.963 43.478 0.00 0.00 37.65 3.24
3667 11804 5.057819 TCACCGAGATACACTATCACTCTC 58.942 45.833 0.00 0.00 37.65 3.20
3668 11805 4.816925 CACCGAGATACACTATCACTCTCA 59.183 45.833 0.00 0.00 37.65 3.27
3669 11806 5.049749 CACCGAGATACACTATCACTCTCAG 60.050 48.000 0.00 0.00 37.65 3.35
3670 11807 5.060506 CCGAGATACACTATCACTCTCAGT 58.939 45.833 0.00 0.00 37.65 3.41
3671 11808 5.529430 CCGAGATACACTATCACTCTCAGTT 59.471 44.000 0.00 0.00 37.65 3.16
3672 11809 6.038825 CCGAGATACACTATCACTCTCAGTTT 59.961 42.308 0.00 0.00 37.65 2.66
3673 11810 7.129622 CGAGATACACTATCACTCTCAGTTTC 58.870 42.308 0.00 0.00 37.65 2.78
3674 11811 7.201652 CGAGATACACTATCACTCTCAGTTTCA 60.202 40.741 0.00 0.00 37.65 2.69
3675 11812 8.532186 AGATACACTATCACTCTCAGTTTCAT 57.468 34.615 0.00 0.00 37.65 2.57
3676 11813 8.412456 AGATACACTATCACTCTCAGTTTCATG 58.588 37.037 0.00 0.00 37.65 3.07
3677 11814 6.596309 ACACTATCACTCTCAGTTTCATGA 57.404 37.500 0.00 0.00 0.00 3.07
3678 11815 6.997655 ACACTATCACTCTCAGTTTCATGAA 58.002 36.000 3.38 3.38 0.00 2.57
3679 11816 7.619050 ACACTATCACTCTCAGTTTCATGAAT 58.381 34.615 9.40 0.00 0.00 2.57
3680 11817 7.763528 ACACTATCACTCTCAGTTTCATGAATC 59.236 37.037 9.40 8.74 0.00 2.52
3681 11818 7.763071 CACTATCACTCTCAGTTTCATGAATCA 59.237 37.037 16.79 0.00 0.00 2.57
3682 11819 8.484575 ACTATCACTCTCAGTTTCATGAATCAT 58.515 33.333 16.79 0.00 0.00 2.45
3683 11820 6.980051 TCACTCTCAGTTTCATGAATCATG 57.020 37.500 16.63 16.63 42.60 3.07
3721 11858 9.814899 AACTTGTGAACATATTTGAAATTGTGA 57.185 25.926 0.00 0.00 0.00 3.58
3722 11859 9.814899 ACTTGTGAACATATTTGAAATTGTGAA 57.185 25.926 0.00 0.00 0.00 3.18
3724 11861 9.591792 TTGTGAACATATTTGAAATTGTGAACA 57.408 25.926 0.00 6.48 0.00 3.18
3725 11862 9.761504 TGTGAACATATTTGAAATTGTGAACAT 57.238 25.926 0.00 0.00 0.00 2.71
3753 11890 9.737427 TTTTAAATTCATGAACGCTTTTACAGA 57.263 25.926 11.07 0.00 0.00 3.41
3754 11891 9.906660 TTTAAATTCATGAACGCTTTTACAGAT 57.093 25.926 11.07 0.00 0.00 2.90
3755 11892 9.906660 TTAAATTCATGAACGCTTTTACAGATT 57.093 25.926 11.07 0.00 0.00 2.40
3756 11893 8.816640 AAATTCATGAACGCTTTTACAGATTT 57.183 26.923 11.07 0.00 0.00 2.17
3757 11894 8.816640 AATTCATGAACGCTTTTACAGATTTT 57.183 26.923 11.07 0.00 0.00 1.82
3758 11895 8.816640 ATTCATGAACGCTTTTACAGATTTTT 57.183 26.923 11.07 0.00 0.00 1.94
3759 11896 7.621832 TCATGAACGCTTTTACAGATTTTTG 57.378 32.000 0.00 0.00 0.00 2.44
3760 11897 7.421599 TCATGAACGCTTTTACAGATTTTTGA 58.578 30.769 0.00 0.00 0.00 2.69
3761 11898 7.918033 TCATGAACGCTTTTACAGATTTTTGAA 59.082 29.630 0.00 0.00 0.00 2.69
3762 11899 7.444558 TGAACGCTTTTACAGATTTTTGAAC 57.555 32.000 0.00 0.00 0.00 3.18
3763 11900 7.030165 TGAACGCTTTTACAGATTTTTGAACA 58.970 30.769 0.00 0.00 0.00 3.18
3764 11901 7.704472 TGAACGCTTTTACAGATTTTTGAACAT 59.296 29.630 0.00 0.00 0.00 2.71
3765 11902 8.419076 AACGCTTTTACAGATTTTTGAACATT 57.581 26.923 0.00 0.00 0.00 2.71
3766 11903 8.419076 ACGCTTTTACAGATTTTTGAACATTT 57.581 26.923 0.00 0.00 0.00 2.32
3767 11904 8.539674 ACGCTTTTACAGATTTTTGAACATTTC 58.460 29.630 0.00 0.00 0.00 2.17
3768 11905 8.755018 CGCTTTTACAGATTTTTGAACATTTCT 58.245 29.630 0.00 0.00 0.00 2.52
3788 11925 9.708222 CATTTCTAAAATCAAGTACTTCATCCG 57.292 33.333 4.77 0.00 0.00 4.18
3789 11926 8.842358 TTTCTAAAATCAAGTACTTCATCCGT 57.158 30.769 4.77 0.00 0.00 4.69
3790 11927 8.842358 TTCTAAAATCAAGTACTTCATCCGTT 57.158 30.769 4.77 0.00 0.00 4.44
3791 11928 8.475331 TCTAAAATCAAGTACTTCATCCGTTC 57.525 34.615 4.77 0.00 0.00 3.95
3792 11929 6.496338 AAAATCAAGTACTTCATCCGTTCC 57.504 37.500 4.77 0.00 0.00 3.62
3793 11930 5.422214 AATCAAGTACTTCATCCGTTCCT 57.578 39.130 4.77 0.00 0.00 3.36
3794 11931 6.540438 AATCAAGTACTTCATCCGTTCCTA 57.460 37.500 4.77 0.00 0.00 2.94
3795 11932 5.988310 TCAAGTACTTCATCCGTTCCTAA 57.012 39.130 4.77 0.00 0.00 2.69
3796 11933 6.540438 TCAAGTACTTCATCCGTTCCTAAT 57.460 37.500 4.77 0.00 0.00 1.73
3797 11934 7.649533 TCAAGTACTTCATCCGTTCCTAATA 57.350 36.000 4.77 0.00 0.00 0.98
3798 11935 8.246430 TCAAGTACTTCATCCGTTCCTAATAT 57.754 34.615 4.77 0.00 0.00 1.28
3799 11936 8.701895 TCAAGTACTTCATCCGTTCCTAATATT 58.298 33.333 4.77 0.00 0.00 1.28
3800 11937 9.326413 CAAGTACTTCATCCGTTCCTAATATTT 57.674 33.333 4.77 0.00 0.00 1.40
3801 11938 8.888579 AGTACTTCATCCGTTCCTAATATTTG 57.111 34.615 0.00 0.00 0.00 2.32
3802 11939 8.483758 AGTACTTCATCCGTTCCTAATATTTGT 58.516 33.333 0.00 0.00 0.00 2.83
3803 11940 7.553881 ACTTCATCCGTTCCTAATATTTGTG 57.446 36.000 0.00 0.00 0.00 3.33
3804 11941 7.110155 ACTTCATCCGTTCCTAATATTTGTGT 58.890 34.615 0.00 0.00 0.00 3.72
3805 11942 7.610305 ACTTCATCCGTTCCTAATATTTGTGTT 59.390 33.333 0.00 0.00 0.00 3.32
3806 11943 7.931578 TCATCCGTTCCTAATATTTGTGTTT 57.068 32.000 0.00 0.00 0.00 2.83
3807 11944 7.981142 TCATCCGTTCCTAATATTTGTGTTTC 58.019 34.615 0.00 0.00 0.00 2.78
3808 11945 7.827236 TCATCCGTTCCTAATATTTGTGTTTCT 59.173 33.333 0.00 0.00 0.00 2.52
3809 11946 9.104965 CATCCGTTCCTAATATTTGTGTTTCTA 57.895 33.333 0.00 0.00 0.00 2.10
3810 11947 8.712285 TCCGTTCCTAATATTTGTGTTTCTAG 57.288 34.615 0.00 0.00 0.00 2.43
3811 11948 8.533657 TCCGTTCCTAATATTTGTGTTTCTAGA 58.466 33.333 0.00 0.00 0.00 2.43
3812 11949 8.818057 CCGTTCCTAATATTTGTGTTTCTAGAG 58.182 37.037 0.00 0.00 0.00 2.43
3813 11950 9.582431 CGTTCCTAATATTTGTGTTTCTAGAGA 57.418 33.333 0.00 0.00 0.00 3.10
3823 11960 9.956720 ATTTGTGTTTCTAGAGATTTCAACAAG 57.043 29.630 6.93 0.00 0.00 3.16
3824 11961 8.506168 TTGTGTTTCTAGAGATTTCAACAAGT 57.494 30.769 6.93 0.00 0.00 3.16
3825 11962 7.919690 TGTGTTTCTAGAGATTTCAACAAGTG 58.080 34.615 6.93 0.00 0.00 3.16
3826 11963 7.768582 TGTGTTTCTAGAGATTTCAACAAGTGA 59.231 33.333 6.93 0.00 0.00 3.41
3827 11964 8.064814 GTGTTTCTAGAGATTTCAACAAGTGAC 58.935 37.037 6.93 0.00 35.39 3.67
3828 11965 7.987458 TGTTTCTAGAGATTTCAACAAGTGACT 59.013 33.333 3.49 0.00 35.39 3.41
3829 11966 9.477484 GTTTCTAGAGATTTCAACAAGTGACTA 57.523 33.333 0.00 0.00 35.39 2.59
3830 11967 9.477484 TTTCTAGAGATTTCAACAAGTGACTAC 57.523 33.333 0.00 0.00 35.39 2.73
3831 11968 8.178313 TCTAGAGATTTCAACAAGTGACTACA 57.822 34.615 0.00 0.00 35.39 2.74
3832 11969 8.807118 TCTAGAGATTTCAACAAGTGACTACAT 58.193 33.333 0.00 0.00 35.39 2.29
3834 11971 8.764524 AGAGATTTCAACAAGTGACTACATAC 57.235 34.615 0.00 0.00 35.39 2.39
3835 11972 7.542477 AGAGATTTCAACAAGTGACTACATACG 59.458 37.037 0.00 0.00 35.39 3.06
3836 11973 7.375834 AGATTTCAACAAGTGACTACATACGA 58.624 34.615 0.00 0.00 35.39 3.43
3837 11974 7.870954 AGATTTCAACAAGTGACTACATACGAA 59.129 33.333 0.00 0.00 35.39 3.85
3838 11975 7.402811 TTTCAACAAGTGACTACATACGAAG 57.597 36.000 0.00 0.00 35.39 3.79
3839 11976 4.921515 TCAACAAGTGACTACATACGAAGC 59.078 41.667 0.00 0.00 0.00 3.86
3840 11977 4.514781 ACAAGTGACTACATACGAAGCA 57.485 40.909 0.00 0.00 0.00 3.91
3841 11978 4.878439 ACAAGTGACTACATACGAAGCAA 58.122 39.130 0.00 0.00 0.00 3.91
3842 11979 5.294356 ACAAGTGACTACATACGAAGCAAA 58.706 37.500 0.00 0.00 0.00 3.68
3843 11980 5.756347 ACAAGTGACTACATACGAAGCAAAA 59.244 36.000 0.00 0.00 0.00 2.44
3844 11981 6.426937 ACAAGTGACTACATACGAAGCAAAAT 59.573 34.615 0.00 0.00 0.00 1.82
3845 11982 6.408858 AGTGACTACATACGAAGCAAAATG 57.591 37.500 0.00 0.00 0.00 2.32
3846 11983 6.163476 AGTGACTACATACGAAGCAAAATGA 58.837 36.000 0.00 0.00 0.00 2.57
3847 11984 6.311445 AGTGACTACATACGAAGCAAAATGAG 59.689 38.462 0.00 0.00 0.00 2.90
3848 11985 6.090898 GTGACTACATACGAAGCAAAATGAGT 59.909 38.462 0.00 0.00 0.00 3.41
3849 11986 6.090763 TGACTACATACGAAGCAAAATGAGTG 59.909 38.462 0.00 0.00 0.00 3.51
3850 11987 6.163476 ACTACATACGAAGCAAAATGAGTGA 58.837 36.000 0.00 0.00 0.00 3.41
3851 11988 5.940192 ACATACGAAGCAAAATGAGTGAA 57.060 34.783 0.00 0.00 0.00 3.18
3852 11989 6.500684 ACATACGAAGCAAAATGAGTGAAT 57.499 33.333 0.00 0.00 0.00 2.57
3853 11990 6.546395 ACATACGAAGCAAAATGAGTGAATC 58.454 36.000 0.00 0.00 0.00 2.52
3854 11991 6.372659 ACATACGAAGCAAAATGAGTGAATCT 59.627 34.615 0.00 0.00 0.00 2.40
3855 11992 5.039480 ACGAAGCAAAATGAGTGAATCTG 57.961 39.130 0.00 0.00 0.00 2.90
3856 11993 3.850273 CGAAGCAAAATGAGTGAATCTGC 59.150 43.478 0.00 0.00 0.00 4.26
3857 11994 4.614306 CGAAGCAAAATGAGTGAATCTGCA 60.614 41.667 0.00 0.00 0.00 4.41
3858 11995 4.170292 AGCAAAATGAGTGAATCTGCAC 57.830 40.909 0.00 0.00 39.05 4.57
3871 12008 8.430801 AGTGAATCTGCACTCTAAAATATGTC 57.569 34.615 0.00 0.00 45.54 3.06
3872 12009 8.263640 AGTGAATCTGCACTCTAAAATATGTCT 58.736 33.333 0.00 0.00 45.54 3.41
3873 12010 9.534565 GTGAATCTGCACTCTAAAATATGTCTA 57.465 33.333 0.00 0.00 35.91 2.59
3888 12025 7.876936 AATATGTCTATATACATCCGGACGT 57.123 36.000 8.80 8.80 40.52 4.34
3889 12026 5.562506 ATGTCTATATACATCCGGACGTG 57.437 43.478 14.62 8.65 35.08 4.49
3890 12027 3.754850 TGTCTATATACATCCGGACGTGG 59.245 47.826 14.62 2.91 0.00 4.94
3891 12028 3.755378 GTCTATATACATCCGGACGTGGT 59.245 47.826 14.62 9.18 0.00 4.16
3892 12029 4.937620 GTCTATATACATCCGGACGTGGTA 59.062 45.833 14.62 11.15 0.00 3.25
3893 12030 5.064452 GTCTATATACATCCGGACGTGGTAG 59.936 48.000 14.62 12.09 0.00 3.18
3894 12031 2.062971 ATACATCCGGACGTGGTAGT 57.937 50.000 14.62 3.38 0.00 2.73
3895 12032 1.382522 TACATCCGGACGTGGTAGTC 58.617 55.000 14.62 0.00 40.25 2.59
3905 12042 4.400036 GACGTGGTAGTCCATTTGAAAC 57.600 45.455 0.00 0.00 46.20 2.78
3906 12043 3.143728 ACGTGGTAGTCCATTTGAAACC 58.856 45.455 0.00 0.00 46.20 3.27
3907 12044 3.181448 ACGTGGTAGTCCATTTGAAACCT 60.181 43.478 0.00 0.00 46.20 3.50
3908 12045 3.818773 CGTGGTAGTCCATTTGAAACCTT 59.181 43.478 0.00 0.00 46.20 3.50
3909 12046 4.277423 CGTGGTAGTCCATTTGAAACCTTT 59.723 41.667 0.00 0.00 46.20 3.11
3910 12047 5.470777 CGTGGTAGTCCATTTGAAACCTTTA 59.529 40.000 0.00 0.00 46.20 1.85
3911 12048 6.016943 CGTGGTAGTCCATTTGAAACCTTTAA 60.017 38.462 0.00 0.00 46.20 1.52
3912 12049 7.468906 CGTGGTAGTCCATTTGAAACCTTTAAA 60.469 37.037 0.00 0.00 46.20 1.52
3913 12050 8.198778 GTGGTAGTCCATTTGAAACCTTTAAAA 58.801 33.333 0.00 0.00 46.20 1.52
3914 12051 8.759782 TGGTAGTCCATTTGAAACCTTTAAAAA 58.240 29.630 0.00 0.00 39.03 1.94
3915 12052 9.256477 GGTAGTCCATTTGAAACCTTTAAAAAG 57.744 33.333 0.00 0.00 35.79 2.27
3917 12054 8.942338 AGTCCATTTGAAACCTTTAAAAAGAC 57.058 30.769 4.01 6.26 38.28 3.01
3918 12055 8.536175 AGTCCATTTGAAACCTTTAAAAAGACA 58.464 29.630 4.01 0.00 38.28 3.41
3919 12056 9.157104 GTCCATTTGAAACCTTTAAAAAGACAA 57.843 29.630 4.01 3.20 38.28 3.18
3920 12057 9.726438 TCCATTTGAAACCTTTAAAAAGACAAA 57.274 25.926 4.01 10.19 38.28 2.83
3937 12074 8.539117 AAAGACAAATATTTAGGAATGGAGGG 57.461 34.615 0.00 0.00 0.00 4.30
3938 12075 7.465900 AGACAAATATTTAGGAATGGAGGGA 57.534 36.000 0.00 0.00 0.00 4.20
3939 12076 7.521669 AGACAAATATTTAGGAATGGAGGGAG 58.478 38.462 0.00 0.00 0.00 4.30
3940 12077 7.129504 AGACAAATATTTAGGAATGGAGGGAGT 59.870 37.037 0.00 0.00 0.00 3.85
3941 12078 8.344939 ACAAATATTTAGGAATGGAGGGAGTA 57.655 34.615 0.00 0.00 0.00 2.59
3942 12079 8.218488 ACAAATATTTAGGAATGGAGGGAGTAC 58.782 37.037 0.00 0.00 0.00 2.73
4049 12191 9.993881 GAACATTTTTAGAATGAACGAACATTG 57.006 29.630 14.06 3.94 40.03 2.82
4051 12193 9.180678 ACATTTTTAGAATGAACGAACATTGTC 57.819 29.630 14.06 4.24 40.03 3.18
4053 12195 9.965824 ATTTTTAGAATGAACGAACATTGTCTT 57.034 25.926 14.06 3.58 40.03 3.01
4163 12306 5.359860 TGCATGATCATTTTCTGAATCAGCT 59.640 36.000 5.16 0.00 37.44 4.24
4222 12366 9.528018 GTCATGAACAGTTTTTGAATTTTAGGA 57.472 29.630 0.00 0.00 0.00 2.94
4246 12390 9.398170 GGATATATTTTTCCATTCATGAACACG 57.602 33.333 11.07 2.30 31.99 4.49
4256 12400 6.640499 TCCATTCATGAACACGTTTTGAATTC 59.360 34.615 11.07 0.00 35.46 2.17
4262 12415 7.543868 TCATGAACACGTTTTGAATTCTTGTTT 59.456 29.630 7.05 0.00 0.00 2.83
4265 12418 9.193133 TGAACACGTTTTGAATTCTTGTTTAAA 57.807 25.926 7.05 0.00 0.00 1.52
4352 12506 8.574196 AAGATTTGTTTTCATAGTTTGGAACG 57.426 30.769 0.00 0.00 36.23 3.95
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
60 61 1.538629 TGGGACCAGGTCTGATGCA 60.539 57.895 19.57 0.00 32.47 3.96
109 110 5.099042 ACATTAGCTTATGAGGACCGTTT 57.901 39.130 19.06 0.00 0.00 3.60
139 140 3.896888 TGAAGAAACCACATGCTCCAAAT 59.103 39.130 0.00 0.00 0.00 2.32
164 165 2.742589 GACCAGTTCGATTCCCAGAAAC 59.257 50.000 0.00 0.00 0.00 2.78
176 177 3.380479 TTAGACACCTTGACCAGTTCG 57.620 47.619 0.00 0.00 0.00 3.95
246 247 5.745514 CATACGTTGTATAGCTCTACACGT 58.254 41.667 26.40 26.40 39.84 4.49
317 326 2.159338 CCCACGTAACGTAGCTACATGT 60.159 50.000 23.21 12.40 38.32 3.21
359 368 3.958147 TCTAGTTAACTCGGATCATGCCA 59.042 43.478 12.39 0.00 0.00 4.92
603 617 4.078639 AGCCTCAGCCTAATGTGAATAC 57.921 45.455 0.00 0.00 41.25 1.89
790 807 5.334337 CGTTGCAGTATGATGGTTGATATGG 60.334 44.000 0.00 0.00 39.69 2.74
946 963 1.072159 GTTGAGTGTGCTGAGGCCT 59.928 57.895 3.86 3.86 37.74 5.19
1047 1071 8.877195 AGGAAGACTACAATTAGTTTCAGGTAA 58.123 33.333 0.00 0.00 38.77 2.85
1732 3478 1.841302 ATGAACCCAAGCTCGCCAGA 61.841 55.000 0.00 0.00 0.00 3.86
1908 3654 0.382158 GGTAGGCGTTACCCTCGTAC 59.618 60.000 6.93 0.00 45.25 3.67
1975 3822 6.348786 GCAATCAGATAAGTCAAACTGCTTGA 60.349 38.462 0.00 0.00 41.93 3.02
2007 3854 5.049060 TCTGAACATGGTATCAACAAAACCG 60.049 40.000 0.00 0.00 35.98 4.44
2095 3942 2.094649 CGGAGTGTTAAGACAGACTCCC 60.095 54.545 10.55 0.00 42.14 4.30
2391 4278 5.877012 TGTGCTTTTTCCTTTGTAATTGCAA 59.123 32.000 0.00 0.00 0.00 4.08
2441 4328 1.188863 ACATGAGCCCTCCATTTTGC 58.811 50.000 0.00 0.00 0.00 3.68
2511 4398 5.296283 CAGTGGCTATCTTGATCTCCTTTTG 59.704 44.000 0.00 0.00 0.00 2.44
2552 4439 1.361668 CGCCACATCCAAGAACTCGG 61.362 60.000 0.00 0.00 0.00 4.63
2964 4857 1.237285 CCGAAGTCTGCAACCTTGGG 61.237 60.000 10.39 10.39 0.00 4.12
3460 11580 2.187946 CATCTGTCACCTCGGCCC 59.812 66.667 0.00 0.00 0.00 5.80
3564 11701 7.593273 TCCTTTTGCTAATTTCACATAAACACG 59.407 33.333 0.00 0.00 0.00 4.49
3577 11714 4.081697 CCATTTCGGGTCCTTTTGCTAATT 60.082 41.667 0.00 0.00 0.00 1.40
3578 11715 3.447229 CCATTTCGGGTCCTTTTGCTAAT 59.553 43.478 0.00 0.00 0.00 1.73
3579 11716 2.823154 CCATTTCGGGTCCTTTTGCTAA 59.177 45.455 0.00 0.00 0.00 3.09
3580 11717 2.040545 TCCATTTCGGGTCCTTTTGCTA 59.959 45.455 0.00 0.00 34.36 3.49
3581 11718 1.203001 TCCATTTCGGGTCCTTTTGCT 60.203 47.619 0.00 0.00 34.36 3.91
3582 11719 1.253100 TCCATTTCGGGTCCTTTTGC 58.747 50.000 0.00 0.00 34.36 3.68
3583 11720 3.153919 TCTTCCATTTCGGGTCCTTTTG 58.846 45.455 0.00 0.00 34.36 2.44
3584 11721 3.518992 TCTTCCATTTCGGGTCCTTTT 57.481 42.857 0.00 0.00 34.36 2.27
3585 11722 3.518992 TTCTTCCATTTCGGGTCCTTT 57.481 42.857 0.00 0.00 34.36 3.11
3586 11723 3.518992 TTTCTTCCATTTCGGGTCCTT 57.481 42.857 0.00 0.00 34.36 3.36
3587 11724 3.518992 TTTTCTTCCATTTCGGGTCCT 57.481 42.857 0.00 0.00 34.36 3.85
3607 11744 8.926374 TGTAATCATGGCCAGATTATGATTTTT 58.074 29.630 27.87 13.75 44.69 1.94
3608 11745 8.481492 TGTAATCATGGCCAGATTATGATTTT 57.519 30.769 27.87 14.32 44.69 1.82
3609 11746 8.660295 ATGTAATCATGGCCAGATTATGATTT 57.340 30.769 27.87 13.73 44.69 2.17
3611 11748 8.660295 AAATGTAATCATGGCCAGATTATGAT 57.340 30.769 26.53 20.78 41.84 2.45
3612 11749 8.361889 CAAAATGTAATCATGGCCAGATTATGA 58.638 33.333 26.53 19.73 39.40 2.15
3613 11750 7.117236 GCAAAATGTAATCATGGCCAGATTATG 59.883 37.037 26.53 22.43 39.40 1.90
3614 11751 7.015877 AGCAAAATGTAATCATGGCCAGATTAT 59.984 33.333 26.53 17.16 39.40 1.28
3615 11752 6.324512 AGCAAAATGTAATCATGGCCAGATTA 59.675 34.615 23.01 23.01 37.02 1.75
3616 11753 5.129815 AGCAAAATGTAATCATGGCCAGATT 59.870 36.000 24.48 24.48 39.01 2.40
3617 11754 4.652421 AGCAAAATGTAATCATGGCCAGAT 59.348 37.500 13.05 11.64 34.19 2.90
3618 11755 4.025360 AGCAAAATGTAATCATGGCCAGA 58.975 39.130 13.05 9.59 34.19 3.86
3619 11756 4.116961 CAGCAAAATGTAATCATGGCCAG 58.883 43.478 13.05 3.43 34.19 4.85
3620 11757 3.679361 GCAGCAAAATGTAATCATGGCCA 60.679 43.478 8.56 8.56 34.19 5.36
3621 11758 2.867975 GCAGCAAAATGTAATCATGGCC 59.132 45.455 0.00 0.00 34.19 5.36
3622 11759 3.523547 TGCAGCAAAATGTAATCATGGC 58.476 40.909 0.00 0.00 34.19 4.40
3623 11760 5.233476 GTGATGCAGCAAAATGTAATCATGG 59.767 40.000 6.05 0.00 34.19 3.66
3624 11761 5.233476 GGTGATGCAGCAAAATGTAATCATG 59.767 40.000 6.05 0.00 34.19 3.07
3625 11762 5.353938 GGTGATGCAGCAAAATGTAATCAT 58.646 37.500 6.05 0.00 32.07 2.45
3626 11763 4.674885 CGGTGATGCAGCAAAATGTAATCA 60.675 41.667 6.05 0.00 0.00 2.57
3627 11764 3.792956 CGGTGATGCAGCAAAATGTAATC 59.207 43.478 6.05 0.00 0.00 1.75
3628 11765 3.443329 TCGGTGATGCAGCAAAATGTAAT 59.557 39.130 6.05 0.00 0.00 1.89
3629 11766 2.816672 TCGGTGATGCAGCAAAATGTAA 59.183 40.909 6.05 0.00 0.00 2.41
3630 11767 2.419673 CTCGGTGATGCAGCAAAATGTA 59.580 45.455 6.05 0.00 0.00 2.29
3631 11768 1.200716 CTCGGTGATGCAGCAAAATGT 59.799 47.619 6.05 0.00 0.00 2.71
3632 11769 1.469703 TCTCGGTGATGCAGCAAAATG 59.530 47.619 6.05 0.00 0.00 2.32
3633 11770 1.825090 TCTCGGTGATGCAGCAAAAT 58.175 45.000 6.05 0.00 0.00 1.82
3634 11771 1.825090 ATCTCGGTGATGCAGCAAAA 58.175 45.000 6.05 0.00 33.43 2.44
3635 11772 2.279741 GTATCTCGGTGATGCAGCAAA 58.720 47.619 6.05 0.00 37.65 3.68
3636 11773 1.206849 TGTATCTCGGTGATGCAGCAA 59.793 47.619 6.05 0.00 41.66 3.91
3637 11774 0.823460 TGTATCTCGGTGATGCAGCA 59.177 50.000 0.00 0.00 41.66 4.41
3638 11775 1.202463 AGTGTATCTCGGTGATGCAGC 60.202 52.381 10.42 0.00 45.85 5.25
3639 11776 2.879002 AGTGTATCTCGGTGATGCAG 57.121 50.000 10.42 0.00 45.85 4.41
3640 11777 3.888930 TGATAGTGTATCTCGGTGATGCA 59.111 43.478 6.72 6.72 43.71 3.96
3641 11778 4.022762 AGTGATAGTGTATCTCGGTGATGC 60.023 45.833 2.94 2.36 38.12 3.91
3642 11779 5.471797 AGAGTGATAGTGTATCTCGGTGATG 59.528 44.000 2.94 0.00 36.65 3.07
3643 11780 5.626142 AGAGTGATAGTGTATCTCGGTGAT 58.374 41.667 0.00 0.00 39.11 3.06
3644 11781 5.037383 AGAGTGATAGTGTATCTCGGTGA 57.963 43.478 0.00 0.00 36.17 4.02
3645 11782 4.816925 TGAGAGTGATAGTGTATCTCGGTG 59.183 45.833 0.00 0.00 39.39 4.94
3646 11783 5.037383 TGAGAGTGATAGTGTATCTCGGT 57.963 43.478 0.00 0.00 39.39 4.69
3647 11784 5.060506 ACTGAGAGTGATAGTGTATCTCGG 58.939 45.833 7.59 7.59 45.06 4.63
3648 11785 6.612247 AACTGAGAGTGATAGTGTATCTCG 57.388 41.667 0.00 0.00 39.39 4.04
3649 11786 7.990917 TGAAACTGAGAGTGATAGTGTATCTC 58.009 38.462 0.00 0.00 37.50 2.75
3650 11787 7.946381 TGAAACTGAGAGTGATAGTGTATCT 57.054 36.000 0.00 0.00 36.17 1.98
3651 11788 8.409371 TCATGAAACTGAGAGTGATAGTGTATC 58.591 37.037 0.00 0.00 35.74 2.24
3652 11789 8.298729 TCATGAAACTGAGAGTGATAGTGTAT 57.701 34.615 0.00 0.00 0.00 2.29
3653 11790 7.703058 TCATGAAACTGAGAGTGATAGTGTA 57.297 36.000 0.00 0.00 0.00 2.90
3654 11791 6.596309 TCATGAAACTGAGAGTGATAGTGT 57.404 37.500 0.00 0.00 0.00 3.55
3655 11792 7.763071 TGATTCATGAAACTGAGAGTGATAGTG 59.237 37.037 13.09 0.00 0.00 2.74
3656 11793 7.845037 TGATTCATGAAACTGAGAGTGATAGT 58.155 34.615 13.09 0.00 0.00 2.12
3657 11794 8.766151 CATGATTCATGAAACTGAGAGTGATAG 58.234 37.037 19.84 0.00 43.81 2.08
3658 11795 8.480501 TCATGATTCATGAAACTGAGAGTGATA 58.519 33.333 23.72 0.00 46.17 2.15
3659 11796 7.336396 TCATGATTCATGAAACTGAGAGTGAT 58.664 34.615 23.72 0.00 46.17 3.06
3660 11797 6.704310 TCATGATTCATGAAACTGAGAGTGA 58.296 36.000 23.72 6.00 46.17 3.41
3661 11798 6.980051 TCATGATTCATGAAACTGAGAGTG 57.020 37.500 23.72 3.87 46.17 3.51
3695 11832 9.814899 TCACAATTTCAAATATGTTCACAAGTT 57.185 25.926 0.00 0.00 0.00 2.66
3696 11833 9.814899 TTCACAATTTCAAATATGTTCACAAGT 57.185 25.926 0.00 0.00 0.00 3.16
3698 11835 9.591792 TGTTCACAATTTCAAATATGTTCACAA 57.408 25.926 0.00 0.00 0.00 3.33
3699 11836 9.761504 ATGTTCACAATTTCAAATATGTTCACA 57.238 25.926 0.00 0.00 0.00 3.58
3727 11864 9.737427 TCTGTAAAAGCGTTCATGAATTTAAAA 57.263 25.926 12.12 4.20 0.00 1.52
3728 11865 9.906660 ATCTGTAAAAGCGTTCATGAATTTAAA 57.093 25.926 12.12 6.68 0.00 1.52
3729 11866 9.906660 AATCTGTAAAAGCGTTCATGAATTTAA 57.093 25.926 12.12 0.00 0.00 1.52
3730 11867 9.906660 AAATCTGTAAAAGCGTTCATGAATTTA 57.093 25.926 12.12 9.35 0.00 1.40
3731 11868 8.816640 AAATCTGTAAAAGCGTTCATGAATTT 57.183 26.923 12.12 10.33 0.00 1.82
3732 11869 8.816640 AAAATCTGTAAAAGCGTTCATGAATT 57.183 26.923 12.12 3.96 0.00 2.17
3733 11870 8.702438 CAAAAATCTGTAAAAGCGTTCATGAAT 58.298 29.630 12.12 0.00 0.00 2.57
3734 11871 7.918033 TCAAAAATCTGTAAAAGCGTTCATGAA 59.082 29.630 3.38 3.38 0.00 2.57
3735 11872 7.421599 TCAAAAATCTGTAAAAGCGTTCATGA 58.578 30.769 0.00 0.00 0.00 3.07
3736 11873 7.621832 TCAAAAATCTGTAAAAGCGTTCATG 57.378 32.000 0.00 0.00 0.00 3.07
3737 11874 7.704472 TGTTCAAAAATCTGTAAAAGCGTTCAT 59.296 29.630 0.00 0.00 0.00 2.57
3738 11875 7.030165 TGTTCAAAAATCTGTAAAAGCGTTCA 58.970 30.769 0.00 0.00 0.00 3.18
3739 11876 7.444558 TGTTCAAAAATCTGTAAAAGCGTTC 57.555 32.000 0.00 0.00 0.00 3.95
3740 11877 8.419076 AATGTTCAAAAATCTGTAAAAGCGTT 57.581 26.923 0.00 0.00 0.00 4.84
3741 11878 8.419076 AAATGTTCAAAAATCTGTAAAAGCGT 57.581 26.923 0.00 0.00 0.00 5.07
3742 11879 8.755018 AGAAATGTTCAAAAATCTGTAAAAGCG 58.245 29.630 0.00 0.00 0.00 4.68
3762 11899 9.708222 CGGATGAAGTACTTGATTTTAGAAATG 57.292 33.333 14.14 0.00 0.00 2.32
3763 11900 9.449719 ACGGATGAAGTACTTGATTTTAGAAAT 57.550 29.630 14.14 0.00 0.00 2.17
3764 11901 8.842358 ACGGATGAAGTACTTGATTTTAGAAA 57.158 30.769 14.14 0.00 0.00 2.52
3765 11902 8.842358 AACGGATGAAGTACTTGATTTTAGAA 57.158 30.769 14.14 0.00 0.00 2.10
3766 11903 7.548075 GGAACGGATGAAGTACTTGATTTTAGA 59.452 37.037 14.14 0.00 0.00 2.10
3767 11904 7.549488 AGGAACGGATGAAGTACTTGATTTTAG 59.451 37.037 14.14 5.78 0.00 1.85
3768 11905 7.391620 AGGAACGGATGAAGTACTTGATTTTA 58.608 34.615 14.14 0.00 0.00 1.52
3769 11906 6.238648 AGGAACGGATGAAGTACTTGATTTT 58.761 36.000 14.14 5.15 0.00 1.82
3770 11907 5.805728 AGGAACGGATGAAGTACTTGATTT 58.194 37.500 14.14 1.30 0.00 2.17
3771 11908 5.422214 AGGAACGGATGAAGTACTTGATT 57.578 39.130 14.14 0.00 0.00 2.57
3772 11909 6.540438 TTAGGAACGGATGAAGTACTTGAT 57.460 37.500 14.14 10.55 0.00 2.57
3773 11910 5.988310 TTAGGAACGGATGAAGTACTTGA 57.012 39.130 14.14 4.68 0.00 3.02
3774 11911 8.888579 AATATTAGGAACGGATGAAGTACTTG 57.111 34.615 14.14 0.12 0.00 3.16
3775 11912 9.326413 CAAATATTAGGAACGGATGAAGTACTT 57.674 33.333 8.13 8.13 0.00 2.24
3776 11913 8.483758 ACAAATATTAGGAACGGATGAAGTACT 58.516 33.333 0.00 0.00 0.00 2.73
3777 11914 8.548721 CACAAATATTAGGAACGGATGAAGTAC 58.451 37.037 0.00 0.00 0.00 2.73
3778 11915 8.262227 ACACAAATATTAGGAACGGATGAAGTA 58.738 33.333 0.00 0.00 0.00 2.24
3779 11916 7.110155 ACACAAATATTAGGAACGGATGAAGT 58.890 34.615 0.00 0.00 0.00 3.01
3780 11917 7.553881 ACACAAATATTAGGAACGGATGAAG 57.446 36.000 0.00 0.00 0.00 3.02
3781 11918 7.931578 AACACAAATATTAGGAACGGATGAA 57.068 32.000 0.00 0.00 0.00 2.57
3782 11919 7.827236 AGAAACACAAATATTAGGAACGGATGA 59.173 33.333 0.00 0.00 0.00 2.92
3783 11920 7.985476 AGAAACACAAATATTAGGAACGGATG 58.015 34.615 0.00 0.00 0.00 3.51
3784 11921 9.326413 CTAGAAACACAAATATTAGGAACGGAT 57.674 33.333 0.00 0.00 0.00 4.18
3785 11922 8.533657 TCTAGAAACACAAATATTAGGAACGGA 58.466 33.333 0.00 0.00 0.00 4.69
3786 11923 8.712285 TCTAGAAACACAAATATTAGGAACGG 57.288 34.615 0.00 0.00 0.00 4.44
3787 11924 9.582431 TCTCTAGAAACACAAATATTAGGAACG 57.418 33.333 0.00 0.00 0.00 3.95
3797 11934 9.956720 CTTGTTGAAATCTCTAGAAACACAAAT 57.043 29.630 5.17 0.00 0.00 2.32
3798 11935 8.956426 ACTTGTTGAAATCTCTAGAAACACAAA 58.044 29.630 5.17 0.00 0.00 2.83
3799 11936 8.397906 CACTTGTTGAAATCTCTAGAAACACAA 58.602 33.333 5.17 1.33 0.00 3.33
3800 11937 7.768582 TCACTTGTTGAAATCTCTAGAAACACA 59.231 33.333 5.17 0.00 0.00 3.72
3801 11938 8.064814 GTCACTTGTTGAAATCTCTAGAAACAC 58.935 37.037 5.17 0.00 35.39 3.32
3802 11939 7.987458 AGTCACTTGTTGAAATCTCTAGAAACA 59.013 33.333 2.06 2.06 35.39 2.83
3803 11940 8.371770 AGTCACTTGTTGAAATCTCTAGAAAC 57.628 34.615 0.00 0.00 35.39 2.78
3804 11941 9.477484 GTAGTCACTTGTTGAAATCTCTAGAAA 57.523 33.333 0.00 0.00 35.39 2.52
3805 11942 8.638873 TGTAGTCACTTGTTGAAATCTCTAGAA 58.361 33.333 0.00 0.00 35.39 2.10
3806 11943 8.178313 TGTAGTCACTTGTTGAAATCTCTAGA 57.822 34.615 0.00 0.00 35.39 2.43
3807 11944 8.994429 ATGTAGTCACTTGTTGAAATCTCTAG 57.006 34.615 0.00 0.00 35.39 2.43
3808 11945 9.856488 GTATGTAGTCACTTGTTGAAATCTCTA 57.144 33.333 0.00 0.00 35.39 2.43
3809 11946 7.542477 CGTATGTAGTCACTTGTTGAAATCTCT 59.458 37.037 0.00 0.00 35.39 3.10
3810 11947 7.541091 TCGTATGTAGTCACTTGTTGAAATCTC 59.459 37.037 0.00 0.00 35.39 2.75
3811 11948 7.375834 TCGTATGTAGTCACTTGTTGAAATCT 58.624 34.615 0.00 0.00 35.39 2.40
3812 11949 7.576750 TCGTATGTAGTCACTTGTTGAAATC 57.423 36.000 0.00 0.00 35.39 2.17
3813 11950 7.360101 GCTTCGTATGTAGTCACTTGTTGAAAT 60.360 37.037 0.00 0.00 35.39 2.17
3814 11951 6.073980 GCTTCGTATGTAGTCACTTGTTGAAA 60.074 38.462 0.00 0.00 35.39 2.69
3815 11952 5.404366 GCTTCGTATGTAGTCACTTGTTGAA 59.596 40.000 0.00 0.00 35.39 2.69
3816 11953 4.921515 GCTTCGTATGTAGTCACTTGTTGA 59.078 41.667 0.00 0.00 0.00 3.18
3817 11954 4.684242 TGCTTCGTATGTAGTCACTTGTTG 59.316 41.667 0.00 0.00 0.00 3.33
3818 11955 4.878439 TGCTTCGTATGTAGTCACTTGTT 58.122 39.130 0.00 0.00 0.00 2.83
3819 11956 4.514781 TGCTTCGTATGTAGTCACTTGT 57.485 40.909 0.00 0.00 0.00 3.16
3820 11957 5.839262 TTTGCTTCGTATGTAGTCACTTG 57.161 39.130 0.00 0.00 0.00 3.16
3821 11958 6.649141 TCATTTTGCTTCGTATGTAGTCACTT 59.351 34.615 0.00 0.00 0.00 3.16
3822 11959 6.163476 TCATTTTGCTTCGTATGTAGTCACT 58.837 36.000 0.00 0.00 0.00 3.41
3823 11960 6.090898 ACTCATTTTGCTTCGTATGTAGTCAC 59.909 38.462 0.00 0.00 0.00 3.67
3824 11961 6.090763 CACTCATTTTGCTTCGTATGTAGTCA 59.909 38.462 0.00 0.00 0.00 3.41
3825 11962 6.310467 TCACTCATTTTGCTTCGTATGTAGTC 59.690 38.462 0.00 0.00 0.00 2.59
3826 11963 6.163476 TCACTCATTTTGCTTCGTATGTAGT 58.837 36.000 0.00 0.00 0.00 2.73
3827 11964 6.647212 TCACTCATTTTGCTTCGTATGTAG 57.353 37.500 0.00 0.00 0.00 2.74
3828 11965 7.549134 AGATTCACTCATTTTGCTTCGTATGTA 59.451 33.333 0.00 0.00 0.00 2.29
3829 11966 5.940192 TTCACTCATTTTGCTTCGTATGT 57.060 34.783 0.00 0.00 0.00 2.29
3830 11967 6.685828 CAGATTCACTCATTTTGCTTCGTATG 59.314 38.462 0.00 0.00 0.00 2.39
3831 11968 6.676456 GCAGATTCACTCATTTTGCTTCGTAT 60.676 38.462 0.00 0.00 0.00 3.06
3832 11969 5.390885 GCAGATTCACTCATTTTGCTTCGTA 60.391 40.000 0.00 0.00 0.00 3.43
3833 11970 4.614535 GCAGATTCACTCATTTTGCTTCGT 60.615 41.667 0.00 0.00 0.00 3.85
3834 11971 3.850273 GCAGATTCACTCATTTTGCTTCG 59.150 43.478 0.00 0.00 0.00 3.79
3835 11972 4.620184 GTGCAGATTCACTCATTTTGCTTC 59.380 41.667 0.00 0.00 34.29 3.86
3836 11973 4.280174 AGTGCAGATTCACTCATTTTGCTT 59.720 37.500 0.00 0.00 43.28 3.91
3837 11974 3.825014 AGTGCAGATTCACTCATTTTGCT 59.175 39.130 0.00 0.00 43.28 3.91
3838 11975 4.170292 AGTGCAGATTCACTCATTTTGC 57.830 40.909 0.00 0.00 43.28 3.68
3847 11984 8.430801 AGACATATTTTAGAGTGCAGATTCAC 57.569 34.615 0.00 0.00 37.24 3.18
3862 11999 8.746530 ACGTCCGGATGTATATAGACATATTTT 58.253 33.333 27.90 0.00 40.18 1.82
3863 12000 8.188799 CACGTCCGGATGTATATAGACATATTT 58.811 37.037 28.44 0.00 40.18 1.40
3864 12001 7.201794 CCACGTCCGGATGTATATAGACATATT 60.202 40.741 28.44 0.00 40.18 1.28
3865 12002 6.262496 CCACGTCCGGATGTATATAGACATAT 59.738 42.308 28.44 0.00 40.18 1.78
3866 12003 5.587443 CCACGTCCGGATGTATATAGACATA 59.413 44.000 28.44 0.00 40.18 2.29
3867 12004 4.398358 CCACGTCCGGATGTATATAGACAT 59.602 45.833 28.44 12.70 42.82 3.06
3868 12005 3.754850 CCACGTCCGGATGTATATAGACA 59.245 47.826 28.44 2.07 0.00 3.41
3869 12006 3.755378 ACCACGTCCGGATGTATATAGAC 59.245 47.826 28.44 0.31 0.00 2.59
3870 12007 4.025040 ACCACGTCCGGATGTATATAGA 57.975 45.455 28.44 0.00 0.00 1.98
3871 12008 4.940046 ACTACCACGTCCGGATGTATATAG 59.060 45.833 28.44 26.54 0.00 1.31
3872 12009 4.910195 ACTACCACGTCCGGATGTATATA 58.090 43.478 28.44 18.38 0.00 0.86
3873 12010 3.755378 GACTACCACGTCCGGATGTATAT 59.245 47.826 28.44 18.24 0.00 0.86
3874 12011 3.141398 GACTACCACGTCCGGATGTATA 58.859 50.000 28.44 20.95 0.00 1.47
3875 12012 1.952296 GACTACCACGTCCGGATGTAT 59.048 52.381 28.44 20.95 0.00 2.29
3876 12013 1.382522 GACTACCACGTCCGGATGTA 58.617 55.000 28.44 13.02 0.00 2.29
3877 12014 1.318158 GGACTACCACGTCCGGATGT 61.318 60.000 23.91 23.91 43.56 3.06
3878 12015 1.436336 GGACTACCACGTCCGGATG 59.564 63.158 22.38 22.38 43.56 3.51
3879 12016 3.930504 GGACTACCACGTCCGGAT 58.069 61.111 7.81 0.00 43.56 4.18
3889 12026 9.256477 CTTTTTAAAGGTTTCAAATGGACTACC 57.744 33.333 0.00 0.00 32.88 3.18
3892 12029 8.536175 TGTCTTTTTAAAGGTTTCAAATGGACT 58.464 29.630 2.63 0.00 36.67 3.85
3893 12030 8.710835 TGTCTTTTTAAAGGTTTCAAATGGAC 57.289 30.769 2.63 0.00 36.67 4.02
3894 12031 9.726438 TTTGTCTTTTTAAAGGTTTCAAATGGA 57.274 25.926 2.63 0.00 36.67 3.41
3911 12048 8.981659 CCCTCCATTCCTAAATATTTGTCTTTT 58.018 33.333 11.05 0.00 0.00 2.27
3912 12049 8.343787 TCCCTCCATTCCTAAATATTTGTCTTT 58.656 33.333 11.05 0.00 0.00 2.52
3913 12050 7.882755 TCCCTCCATTCCTAAATATTTGTCTT 58.117 34.615 11.05 0.00 0.00 3.01
3914 12051 7.129504 ACTCCCTCCATTCCTAAATATTTGTCT 59.870 37.037 11.05 0.00 0.00 3.41
3915 12052 7.290813 ACTCCCTCCATTCCTAAATATTTGTC 58.709 38.462 11.05 0.00 0.00 3.18
3916 12053 7.226059 ACTCCCTCCATTCCTAAATATTTGT 57.774 36.000 11.05 0.00 0.00 2.83
3917 12054 8.440771 AGTACTCCCTCCATTCCTAAATATTTG 58.559 37.037 11.05 1.40 0.00 2.32
3918 12055 8.582891 AGTACTCCCTCCATTCCTAAATATTT 57.417 34.615 5.89 5.89 0.00 1.40
3919 12056 8.582891 AAGTACTCCCTCCATTCCTAAATATT 57.417 34.615 0.00 0.00 0.00 1.28
3920 12057 8.582891 AAAGTACTCCCTCCATTCCTAAATAT 57.417 34.615 0.00 0.00 0.00 1.28
3921 12058 8.401955 AAAAGTACTCCCTCCATTCCTAAATA 57.598 34.615 0.00 0.00 0.00 1.40
3922 12059 6.910259 AAAGTACTCCCTCCATTCCTAAAT 57.090 37.500 0.00 0.00 0.00 1.40
3923 12060 6.713731 AAAAGTACTCCCTCCATTCCTAAA 57.286 37.500 0.00 0.00 0.00 1.85
3924 12061 6.713731 AAAAAGTACTCCCTCCATTCCTAA 57.286 37.500 0.00 0.00 0.00 2.69
4020 12157 8.616942 TGTTCGTTCATTCTAAAAATGTTCTCA 58.383 29.630 0.00 0.00 0.00 3.27
4021 12158 9.612620 ATGTTCGTTCATTCTAAAAATGTTCTC 57.387 29.630 0.00 0.00 0.00 2.87
4038 12180 8.265998 CACCAATTTTTAAGACAATGTTCGTTC 58.734 33.333 0.00 0.00 0.00 3.95
4326 12479 9.030301 CGTTCCAAACTATGAAAACAAATCTTT 57.970 29.630 0.00 0.00 0.00 2.52
4327 12480 8.194769 ACGTTCCAAACTATGAAAACAAATCTT 58.805 29.630 0.00 0.00 0.00 2.40
4329 12482 7.924103 ACGTTCCAAACTATGAAAACAAATC 57.076 32.000 0.00 0.00 0.00 2.17
4377 12534 7.442364 TGGATTCCAAAAATGTTTGCGATTTTA 59.558 29.630 1.94 0.00 42.44 1.52
4384 12541 5.747951 TTGTGGATTCCAAAAATGTTTGC 57.252 34.783 7.05 0.00 42.44 3.68


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.