Multiple sequence alignment - TraesCS5D01G041700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G041700 chr5D 100.000 4173 0 0 1 4173 42018333 42022505 0.000000e+00 7707.0
1 TraesCS5D01G041700 chr5D 90.371 3396 200 55 1 3339 440161877 440165202 0.000000e+00 4342.0
2 TraesCS5D01G041700 chr5D 88.372 86 8 2 3368 3451 440165194 440165279 7.380000e-18 102.0
3 TraesCS5D01G041700 chr5D 92.647 68 5 0 3877 3944 462793847 462793914 9.550000e-17 99.0
4 TraesCS5D01G041700 chr5A 94.798 3672 149 22 1 3664 30406026 30409663 0.000000e+00 5685.0
5 TraesCS5D01G041700 chr5A 90.027 3389 203 52 1 3339 555772218 555775521 0.000000e+00 4261.0
6 TraesCS5D01G041700 chr5A 91.667 120 8 2 3643 3760 547790018 547790137 9.280000e-37 165.0
7 TraesCS5D01G041700 chr5B 94.557 3252 111 26 1 3225 36721979 36725191 0.000000e+00 4964.0
8 TraesCS5D01G041700 chr5B 90.574 3395 201 59 1 3339 535112789 535116120 0.000000e+00 4386.0
9 TraesCS5D01G041700 chr5B 94.289 788 43 1 2440 3225 36745965 36745178 0.000000e+00 1205.0
10 TraesCS5D01G041700 chr5B 95.948 691 27 1 1 691 36766178 36765489 0.000000e+00 1120.0
11 TraesCS5D01G041700 chr5B 94.348 230 6 3 3418 3645 36744977 36744753 3.090000e-91 346.0
12 TraesCS5D01G041700 chr5B 96.622 148 4 1 1275 1422 36765233 36765087 1.160000e-60 244.0
13 TraesCS5D01G041700 chr5B 98.473 131 2 0 1448 1578 36765090 36764960 9.020000e-57 231.0
14 TraesCS5D01G041700 chr5B 94.483 145 4 3 3260 3402 36745178 36745036 1.950000e-53 220.0
15 TraesCS5D01G041700 chr5B 93.443 122 7 1 3260 3380 36725191 36725312 3.310000e-41 180.0
16 TraesCS5D01G041700 chr5B 95.455 110 5 0 3644 3753 666201993 666202102 4.290000e-40 176.0
17 TraesCS5D01G041700 chr5B 97.500 80 2 0 1678 1757 36764965 36764886 2.020000e-28 137.0
18 TraesCS5D01G041700 chr5B 89.535 86 7 2 3368 3451 535116112 535116197 1.590000e-19 108.0
19 TraesCS5D01G041700 chr5B 91.549 71 5 1 3874 3944 223686743 223686674 3.430000e-16 97.1
20 TraesCS5D01G041700 chr4B 93.778 225 12 2 3943 4166 34046760 34046537 1.860000e-88 337.0
21 TraesCS5D01G041700 chr4B 90.244 123 9 2 3767 3886 34046901 34046779 1.550000e-34 158.0
22 TraesCS5D01G041700 chr3D 90.435 230 22 0 3943 4172 39594878 39594649 1.890000e-78 303.0
23 TraesCS5D01G041700 chr3D 86.441 118 8 5 3769 3886 39595006 39594897 5.670000e-24 122.0
24 TraesCS5D01G041700 chr3D 91.667 72 4 2 3872 3943 66262970 66262901 9.550000e-17 99.0
25 TraesCS5D01G041700 chr2A 91.371 197 15 2 3943 4138 761145427 761145622 6.880000e-68 268.0
26 TraesCS5D01G041700 chr2A 90.400 125 12 0 3636 3760 747618208 747618332 9.280000e-37 165.0
27 TraesCS5D01G041700 chr2A 92.174 115 9 0 3633 3747 2648697 2648811 3.340000e-36 163.0
28 TraesCS5D01G041700 chr2A 90.833 120 9 1 3769 3886 761145289 761145408 4.320000e-35 159.0
29 TraesCS5D01G041700 chr2A 96.774 62 2 0 3883 3944 769185534 769185473 2.050000e-18 104.0
30 TraesCS5D01G041700 chr6B 90.863 197 16 2 3943 4138 576455636 576455831 3.200000e-66 263.0
31 TraesCS5D01G041700 chr6B 90.833 120 9 1 3769 3886 576455498 576455617 4.320000e-35 159.0
32 TraesCS5D01G041700 chr3B 83.884 242 22 7 3943 4172 783135257 783135493 9.090000e-52 215.0
33 TraesCS5D01G041700 chr3B 86.667 120 14 1 3769 3886 819805402 819805283 9.410000e-27 132.0
34 TraesCS5D01G041700 chr3B 94.118 68 4 0 3877 3944 466631772 466631705 2.050000e-18 104.0
35 TraesCS5D01G041700 chr2B 95.413 109 5 0 3643 3751 682917331 682917439 1.540000e-39 174.0
36 TraesCS5D01G041700 chr2B 86.842 114 13 1 3775 3886 790016776 790016663 4.380000e-25 126.0
37 TraesCS5D01G041700 chr7B 93.805 113 7 0 3643 3755 697616715 697616827 1.990000e-38 171.0
38 TraesCS5D01G041700 chr7B 88.235 136 12 4 3639 3772 78552165 78552032 4.320000e-35 159.0
39 TraesCS5D01G041700 chr7B 93.939 66 4 0 3878 3943 740997356 740997291 2.650000e-17 100.0
40 TraesCS5D01G041700 chr7B 92.754 69 4 1 3877 3944 692308829 692308761 9.550000e-17 99.0
41 TraesCS5D01G041700 chr1D 92.437 119 9 0 3643 3761 85185527 85185645 1.990000e-38 171.0
42 TraesCS5D01G041700 chr3A 91.453 117 10 0 3639 3755 464012376 464012492 1.200000e-35 161.0
43 TraesCS5D01G041700 chr6A 96.774 62 2 0 3883 3944 395249004 395248943 2.050000e-18 104.0
44 TraesCS5D01G041700 chr6A 95.312 64 3 0 3881 3944 601207222 601207285 7.380000e-18 102.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G041700 chr5D 42018333 42022505 4172 False 7707.000000 7707 100.000000 1 4173 1 chr5D.!!$F1 4172
1 TraesCS5D01G041700 chr5D 440161877 440165279 3402 False 2222.000000 4342 89.371500 1 3451 2 chr5D.!!$F3 3450
2 TraesCS5D01G041700 chr5A 30406026 30409663 3637 False 5685.000000 5685 94.798000 1 3664 1 chr5A.!!$F1 3663
3 TraesCS5D01G041700 chr5A 555772218 555775521 3303 False 4261.000000 4261 90.027000 1 3339 1 chr5A.!!$F3 3338
4 TraesCS5D01G041700 chr5B 36721979 36725312 3333 False 2572.000000 4964 94.000000 1 3380 2 chr5B.!!$F2 3379
5 TraesCS5D01G041700 chr5B 535112789 535116197 3408 False 2247.000000 4386 90.054500 1 3451 2 chr5B.!!$F3 3450
6 TraesCS5D01G041700 chr5B 36744753 36745965 1212 True 590.333333 1205 94.373333 2440 3645 3 chr5B.!!$R2 1205
7 TraesCS5D01G041700 chr5B 36764886 36766178 1292 True 433.000000 1120 97.135750 1 1757 4 chr5B.!!$R3 1756

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
666 675 0.375106 GCTATTGCTGTCCGACAAGC 59.625 55.0 2.19 8.95 36.03 4.01 F
1015 1131 0.548031 GACAATGGAGGGAGATGGCA 59.452 55.0 0.00 0.00 0.00 4.92 F
2826 2993 0.733150 GTCAATTAGCTTCCCACGCC 59.267 55.0 0.00 0.00 0.00 5.68 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1811 1928 0.464036 TCCAGATGATGTACGCCCAC 59.536 55.0 0.0 0.0 0.00 4.61 R
2920 3101 0.106519 GCACTGCCACCCCTATGATT 60.107 55.0 0.0 0.0 0.00 2.57 R
4149 4391 0.031585 GCCAGTTGGTTTTTCGGTCC 59.968 55.0 0.0 0.0 37.57 4.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
58 59 5.417266 TGTAATTCATGGATTTTCTCGGCAA 59.583 36.000 4.09 0.00 0.00 4.52
499 500 5.066968 TCGCAGTTCAGTCATACAATGTA 57.933 39.130 0.00 0.00 0.00 2.29
520 521 1.081892 CGTGCCAGATGTTTCAGAGG 58.918 55.000 0.00 0.00 0.00 3.69
573 574 3.051081 AGTTGACAATCAGCTGACCTC 57.949 47.619 20.97 13.78 36.56 3.85
575 576 3.141398 GTTGACAATCAGCTGACCTCAA 58.859 45.455 20.97 20.82 0.00 3.02
613 614 5.183140 TGCTGGAAAGCTTATGGTTAAGTTC 59.817 40.000 0.00 0.00 37.68 3.01
666 675 0.375106 GCTATTGCTGTCCGACAAGC 59.625 55.000 2.19 8.95 36.03 4.01
783 877 8.652290 ACTCACTTTCTTCTACCTAAAACTGAT 58.348 33.333 0.00 0.00 0.00 2.90
824 921 3.249799 TCAGTTGGTAACGTTTCATGCAG 59.750 43.478 5.91 0.42 42.51 4.41
826 923 3.630312 AGTTGGTAACGTTTCATGCAGTT 59.370 39.130 5.91 0.00 42.51 3.16
1015 1131 0.548031 GACAATGGAGGGAGATGGCA 59.452 55.000 0.00 0.00 0.00 4.92
1019 1135 1.274703 ATGGAGGGAGATGGCAACGT 61.275 55.000 0.00 0.00 42.51 3.99
1341 1458 8.978472 TCTTGCACTATGTAGTATAGTCCTTTT 58.022 33.333 0.00 0.00 34.13 2.27
1356 1473 4.644685 AGTCCTTTTTGCTGCTTAGAAACA 59.355 37.500 0.00 0.00 0.00 2.83
1451 1568 3.075005 GCGAGGAGGTACAGGGCA 61.075 66.667 0.00 0.00 0.00 5.36
1730 1847 1.134580 CACATCCTCATCTCGTGGCTT 60.135 52.381 0.00 0.00 0.00 4.35
1811 1928 4.059459 GTGCTCGTGGCGTTGACG 62.059 66.667 0.00 0.00 45.43 4.35
2042 2159 2.000447 GTCTGGTACGTGCAAGGATTC 59.000 52.381 8.28 0.00 0.00 2.52
2057 2174 1.338200 GGATTCGTGCTTCTGACTGGT 60.338 52.381 0.00 0.00 0.00 4.00
2150 2267 6.422344 TGTTATAGTTACACACTGGTTGGA 57.578 37.500 0.00 0.00 35.97 3.53
2155 2272 4.196971 AGTTACACACTGGTTGGAAGTTC 58.803 43.478 0.00 0.00 32.83 3.01
2204 2348 7.628769 TCACACATAAGACATAACATGCATT 57.371 32.000 0.00 0.00 0.00 3.56
2205 2349 8.054152 TCACACATAAGACATAACATGCATTT 57.946 30.769 0.00 0.00 0.00 2.32
2773 2940 1.802636 CTGCCAATCGGATGCGTTT 59.197 52.632 6.49 1.06 0.00 3.60
2826 2993 0.733150 GTCAATTAGCTTCCCACGCC 59.267 55.000 0.00 0.00 0.00 5.68
2833 3000 1.154035 GCTTCCCACGCCAATTTCG 60.154 57.895 0.00 0.00 0.00 3.46
2887 3066 4.151121 TCCAGAGGTCTGATGATCATCTC 58.849 47.826 30.65 21.04 46.59 2.75
2920 3101 1.696314 GGGGATCTGGTGGGGCTTA 60.696 63.158 0.00 0.00 0.00 3.09
3057 3242 4.883083 TCTGCTCAGTTTCTGTTTATCGT 58.117 39.130 0.00 0.00 32.61 3.73
3073 3261 3.490759 GTGGTGCTCATGGCGACG 61.491 66.667 0.00 0.00 45.43 5.12
3351 3546 5.477637 TGAGATGATGGAAAGTTGAAATGCA 59.522 36.000 0.00 0.00 0.00 3.96
3451 3691 4.992381 TTTCTTGAGCTCTTACGCTTTC 57.008 40.909 16.19 0.00 41.08 2.62
3574 3816 2.496871 TGTCAGCCCCAGCAAATTATTG 59.503 45.455 0.00 0.00 43.56 1.90
3578 3820 1.830477 GCCCCAGCAAATTATTGTGGA 59.170 47.619 9.99 0.00 38.72 4.02
3579 3821 2.435437 GCCCCAGCAAATTATTGTGGAT 59.565 45.455 9.99 0.00 38.72 3.41
3580 3822 3.640967 GCCCCAGCAAATTATTGTGGATA 59.359 43.478 9.99 0.00 38.72 2.59
3581 3823 4.501400 GCCCCAGCAAATTATTGTGGATAC 60.501 45.833 9.99 0.00 38.72 2.24
3619 3861 1.398692 TTGCTTCTTTGGCCGACTTT 58.601 45.000 0.00 0.00 0.00 2.66
3646 3888 1.683629 CCTCCCGAGTTCAGAGCTACT 60.684 57.143 0.00 0.00 0.00 2.57
3648 3890 1.282447 TCCCGAGTTCAGAGCTACTCT 59.718 52.381 11.59 0.00 42.11 3.24
3664 3906 7.826918 AGCTACTCTCTCCGTTCTAAATTAT 57.173 36.000 0.00 0.00 0.00 1.28
3665 3907 8.240267 AGCTACTCTCTCCGTTCTAAATTATT 57.760 34.615 0.00 0.00 0.00 1.40
3666 3908 8.354426 AGCTACTCTCTCCGTTCTAAATTATTC 58.646 37.037 0.00 0.00 0.00 1.75
3667 3909 7.324135 GCTACTCTCTCCGTTCTAAATTATTCG 59.676 40.741 0.00 0.00 0.00 3.34
3668 3910 7.098074 ACTCTCTCCGTTCTAAATTATTCGT 57.902 36.000 0.00 0.00 0.00 3.85
3669 3911 7.194962 ACTCTCTCCGTTCTAAATTATTCGTC 58.805 38.462 0.00 0.00 0.00 4.20
3670 3912 6.197276 TCTCTCCGTTCTAAATTATTCGTCG 58.803 40.000 0.00 0.00 0.00 5.12
3671 3913 4.736793 TCTCCGTTCTAAATTATTCGTCGC 59.263 41.667 0.00 0.00 0.00 5.19
3672 3914 4.675510 TCCGTTCTAAATTATTCGTCGCT 58.324 39.130 0.00 0.00 0.00 4.93
3673 3915 4.501559 TCCGTTCTAAATTATTCGTCGCTG 59.498 41.667 0.00 0.00 0.00 5.18
3674 3916 4.501559 CCGTTCTAAATTATTCGTCGCTGA 59.498 41.667 0.00 0.00 0.00 4.26
3675 3917 5.005012 CCGTTCTAAATTATTCGTCGCTGAA 59.995 40.000 0.00 0.00 0.00 3.02
3676 3918 6.454583 CCGTTCTAAATTATTCGTCGCTGAAA 60.455 38.462 0.00 0.00 0.00 2.69
3677 3919 7.117454 CGTTCTAAATTATTCGTCGCTGAAAT 58.883 34.615 0.00 0.00 0.00 2.17
3678 3920 7.108851 CGTTCTAAATTATTCGTCGCTGAAATG 59.891 37.037 0.00 0.00 0.00 2.32
3679 3921 6.943981 TCTAAATTATTCGTCGCTGAAATGG 58.056 36.000 0.00 0.00 0.00 3.16
3680 3922 5.811399 AAATTATTCGTCGCTGAAATGGA 57.189 34.783 0.00 0.00 0.00 3.41
3681 3923 6.377327 AAATTATTCGTCGCTGAAATGGAT 57.623 33.333 0.00 0.00 0.00 3.41
3682 3924 4.794248 TTATTCGTCGCTGAAATGGATG 57.206 40.909 0.00 0.00 0.00 3.51
3683 3925 2.093306 TTCGTCGCTGAAATGGATGT 57.907 45.000 0.00 0.00 0.00 3.06
3684 3926 2.951457 TCGTCGCTGAAATGGATGTA 57.049 45.000 0.00 0.00 0.00 2.29
3685 3927 3.452755 TCGTCGCTGAAATGGATGTAT 57.547 42.857 0.00 0.00 0.00 2.29
3686 3928 3.381045 TCGTCGCTGAAATGGATGTATC 58.619 45.455 0.00 0.00 0.00 2.24
3687 3929 3.068165 TCGTCGCTGAAATGGATGTATCT 59.932 43.478 0.00 0.00 0.00 1.98
3688 3930 4.277423 TCGTCGCTGAAATGGATGTATCTA 59.723 41.667 0.00 0.00 0.00 1.98
3689 3931 4.618912 CGTCGCTGAAATGGATGTATCTAG 59.381 45.833 0.00 0.00 0.00 2.43
3690 3932 5.562890 CGTCGCTGAAATGGATGTATCTAGA 60.563 44.000 0.00 0.00 0.00 2.43
3691 3933 6.216569 GTCGCTGAAATGGATGTATCTAGAA 58.783 40.000 0.00 0.00 0.00 2.10
3692 3934 6.144724 GTCGCTGAAATGGATGTATCTAGAAC 59.855 42.308 0.00 0.00 0.00 3.01
3693 3935 6.040955 TCGCTGAAATGGATGTATCTAGAACT 59.959 38.462 0.00 0.00 0.00 3.01
3694 3936 7.230712 TCGCTGAAATGGATGTATCTAGAACTA 59.769 37.037 0.00 0.00 0.00 2.24
3695 3937 7.867909 CGCTGAAATGGATGTATCTAGAACTAA 59.132 37.037 0.00 0.00 0.00 2.24
3696 3938 9.547753 GCTGAAATGGATGTATCTAGAACTAAA 57.452 33.333 0.00 0.00 0.00 1.85
3724 3966 8.794335 ACATCTAGATACATCTATACTTGCGA 57.206 34.615 4.54 0.00 38.60 5.10
3725 3967 8.670135 ACATCTAGATACATCTATACTTGCGAC 58.330 37.037 4.54 0.00 38.60 5.19
3726 3968 8.669243 CATCTAGATACATCTATACTTGCGACA 58.331 37.037 4.54 0.00 38.60 4.35
3727 3969 8.617290 TCTAGATACATCTATACTTGCGACAA 57.383 34.615 0.00 0.00 38.60 3.18
3728 3970 8.722394 TCTAGATACATCTATACTTGCGACAAG 58.278 37.037 15.16 15.16 38.60 3.16
3729 3971 7.278461 AGATACATCTATACTTGCGACAAGT 57.722 36.000 22.53 22.53 34.85 3.16
3730 3972 8.392372 AGATACATCTATACTTGCGACAAGTA 57.608 34.615 24.52 24.52 37.18 2.24
3731 3973 8.847196 AGATACATCTATACTTGCGACAAGTAA 58.153 33.333 25.44 15.64 36.45 2.24
3732 3974 9.627395 GATACATCTATACTTGCGACAAGTAAT 57.373 33.333 25.44 16.91 36.45 1.89
3733 3975 9.982651 ATACATCTATACTTGCGACAAGTAATT 57.017 29.630 25.44 17.22 36.45 1.40
3734 3976 8.354011 ACATCTATACTTGCGACAAGTAATTC 57.646 34.615 25.44 0.00 36.45 2.17
3735 3977 7.167635 ACATCTATACTTGCGACAAGTAATTCG 59.832 37.037 25.44 18.18 36.45 3.34
3736 3978 5.975344 TCTATACTTGCGACAAGTAATTCGG 59.025 40.000 25.44 17.00 36.45 4.30
3737 3979 3.034721 ACTTGCGACAAGTAATTCGGA 57.965 42.857 19.21 0.00 35.73 4.55
3738 3980 3.395639 ACTTGCGACAAGTAATTCGGAA 58.604 40.909 19.21 0.00 42.34 4.30
3739 3981 3.185797 ACTTGCGACAAGTAATTCGGAAC 59.814 43.478 19.21 0.00 40.13 3.62
3740 3982 6.846654 TACTTGCGACAAGTAATTCGGAACG 61.847 44.000 21.94 0.00 40.13 3.95
3755 3997 2.562635 GGAACGGAGGGAATAGAAAGC 58.437 52.381 0.00 0.00 0.00 3.51
3756 3998 2.093128 GGAACGGAGGGAATAGAAAGCA 60.093 50.000 0.00 0.00 0.00 3.91
3757 3999 3.606687 GAACGGAGGGAATAGAAAGCAA 58.393 45.455 0.00 0.00 0.00 3.91
3758 4000 2.987232 ACGGAGGGAATAGAAAGCAAC 58.013 47.619 0.00 0.00 0.00 4.17
3759 4001 2.304761 ACGGAGGGAATAGAAAGCAACA 59.695 45.455 0.00 0.00 0.00 3.33
3760 4002 3.054361 ACGGAGGGAATAGAAAGCAACAT 60.054 43.478 0.00 0.00 0.00 2.71
3761 4003 4.163458 ACGGAGGGAATAGAAAGCAACATA 59.837 41.667 0.00 0.00 0.00 2.29
3762 4004 4.752101 CGGAGGGAATAGAAAGCAACATAG 59.248 45.833 0.00 0.00 0.00 2.23
3763 4005 5.453339 CGGAGGGAATAGAAAGCAACATAGA 60.453 44.000 0.00 0.00 0.00 1.98
3764 4006 6.538263 GGAGGGAATAGAAAGCAACATAGAT 58.462 40.000 0.00 0.00 0.00 1.98
3765 4007 6.652900 GGAGGGAATAGAAAGCAACATAGATC 59.347 42.308 0.00 0.00 0.00 2.75
3766 4008 7.141758 AGGGAATAGAAAGCAACATAGATCA 57.858 36.000 0.00 0.00 0.00 2.92
3767 4009 7.577303 AGGGAATAGAAAGCAACATAGATCAA 58.423 34.615 0.00 0.00 0.00 2.57
3768 4010 7.718753 AGGGAATAGAAAGCAACATAGATCAAG 59.281 37.037 0.00 0.00 0.00 3.02
3769 4011 7.716998 GGGAATAGAAAGCAACATAGATCAAGA 59.283 37.037 0.00 0.00 0.00 3.02
3770 4012 8.772705 GGAATAGAAAGCAACATAGATCAAGAG 58.227 37.037 0.00 0.00 0.00 2.85
3771 4013 9.539825 GAATAGAAAGCAACATAGATCAAGAGA 57.460 33.333 0.00 0.00 0.00 3.10
3772 4014 9.545105 AATAGAAAGCAACATAGATCAAGAGAG 57.455 33.333 0.00 0.00 0.00 3.20
3773 4015 6.945218 AGAAAGCAACATAGATCAAGAGAGT 58.055 36.000 0.00 0.00 0.00 3.24
3774 4016 6.817641 AGAAAGCAACATAGATCAAGAGAGTG 59.182 38.462 0.00 0.00 0.00 3.51
3775 4017 5.021033 AGCAACATAGATCAAGAGAGTGG 57.979 43.478 0.00 0.00 0.00 4.00
3776 4018 3.559242 GCAACATAGATCAAGAGAGTGGC 59.441 47.826 0.00 0.00 0.00 5.01
3777 4019 3.724508 ACATAGATCAAGAGAGTGGCG 57.275 47.619 0.00 0.00 0.00 5.69
3778 4020 3.291584 ACATAGATCAAGAGAGTGGCGA 58.708 45.455 0.00 0.00 0.00 5.54
3779 4021 3.894427 ACATAGATCAAGAGAGTGGCGAT 59.106 43.478 0.00 0.00 0.00 4.58
3780 4022 5.073428 ACATAGATCAAGAGAGTGGCGATA 58.927 41.667 0.00 0.00 0.00 2.92
3781 4023 5.182950 ACATAGATCAAGAGAGTGGCGATAG 59.817 44.000 0.00 0.00 0.00 2.08
3793 4035 2.722548 CGATAGCGTGGACGAGCG 60.723 66.667 2.73 0.00 43.02 5.03
3805 4047 3.913573 CGAGCGCGTTTGATCCCG 61.914 66.667 8.43 0.00 0.00 5.14
3806 4048 3.564027 GAGCGCGTTTGATCCCGG 61.564 66.667 8.43 0.00 0.00 5.73
3807 4049 4.388499 AGCGCGTTTGATCCCGGT 62.388 61.111 8.43 0.00 0.00 5.28
3808 4050 2.509786 GCGCGTTTGATCCCGGTA 60.510 61.111 8.43 0.00 0.00 4.02
3809 4051 2.805807 GCGCGTTTGATCCCGGTAC 61.806 63.158 8.43 0.00 0.00 3.34
3823 4065 3.453559 GGTACGTGGACCAATGGAG 57.546 57.895 6.16 0.00 39.51 3.86
3824 4066 0.743345 GGTACGTGGACCAATGGAGC 60.743 60.000 6.16 0.00 39.51 4.70
3825 4067 0.036765 GTACGTGGACCAATGGAGCA 60.037 55.000 6.16 0.00 0.00 4.26
3826 4068 0.687920 TACGTGGACCAATGGAGCAA 59.312 50.000 6.16 0.00 0.00 3.91
3827 4069 0.606401 ACGTGGACCAATGGAGCAAG 60.606 55.000 6.16 0.00 0.00 4.01
3828 4070 0.606401 CGTGGACCAATGGAGCAAGT 60.606 55.000 6.16 0.00 0.00 3.16
3829 4071 1.168714 GTGGACCAATGGAGCAAGTC 58.831 55.000 6.16 0.00 0.00 3.01
3830 4072 0.321564 TGGACCAATGGAGCAAGTCG 60.322 55.000 6.16 0.00 0.00 4.18
3831 4073 0.321653 GGACCAATGGAGCAAGTCGT 60.322 55.000 6.16 0.00 0.00 4.34
3832 4074 1.523758 GACCAATGGAGCAAGTCGTT 58.476 50.000 6.16 0.00 0.00 3.85
3833 4075 1.880027 GACCAATGGAGCAAGTCGTTT 59.120 47.619 6.16 0.00 0.00 3.60
3834 4076 1.608590 ACCAATGGAGCAAGTCGTTTG 59.391 47.619 6.16 0.00 39.88 2.93
3835 4077 1.608590 CCAATGGAGCAAGTCGTTTGT 59.391 47.619 0.00 0.00 39.08 2.83
3836 4078 2.605338 CCAATGGAGCAAGTCGTTTGTG 60.605 50.000 0.00 0.00 39.08 3.33
3837 4079 1.238439 ATGGAGCAAGTCGTTTGTGG 58.762 50.000 0.00 0.00 39.08 4.17
3838 4080 0.107410 TGGAGCAAGTCGTTTGTGGT 60.107 50.000 0.00 0.00 39.08 4.16
3839 4081 0.307760 GGAGCAAGTCGTTTGTGGTG 59.692 55.000 0.00 0.00 39.08 4.17
3840 4082 0.307760 GAGCAAGTCGTTTGTGGTGG 59.692 55.000 0.00 0.00 39.08 4.61
3841 4083 1.101049 AGCAAGTCGTTTGTGGTGGG 61.101 55.000 0.00 0.00 39.08 4.61
3842 4084 2.029743 CAAGTCGTTTGTGGTGGGG 58.970 57.895 0.00 0.00 31.92 4.96
3843 4085 0.464735 CAAGTCGTTTGTGGTGGGGA 60.465 55.000 0.00 0.00 31.92 4.81
3844 4086 0.464916 AAGTCGTTTGTGGTGGGGAC 60.465 55.000 0.00 0.00 0.00 4.46
3845 4087 1.153127 GTCGTTTGTGGTGGGGACA 60.153 57.895 0.00 0.00 38.70 4.02
3846 4088 1.147376 TCGTTTGTGGTGGGGACAG 59.853 57.895 0.00 0.00 44.46 3.51
3847 4089 1.147376 CGTTTGTGGTGGGGACAGA 59.853 57.895 0.00 0.00 44.46 3.41
3848 4090 1.164041 CGTTTGTGGTGGGGACAGAC 61.164 60.000 0.00 0.00 44.46 3.51
3849 4091 0.182775 GTTTGTGGTGGGGACAGACT 59.817 55.000 0.00 0.00 44.46 3.24
3850 4092 1.418637 GTTTGTGGTGGGGACAGACTA 59.581 52.381 0.00 0.00 44.46 2.59
3851 4093 1.348064 TTGTGGTGGGGACAGACTAG 58.652 55.000 0.00 0.00 44.46 2.57
3852 4094 1.192146 TGTGGTGGGGACAGACTAGC 61.192 60.000 0.00 0.00 44.46 3.42
3853 4095 1.982395 TGGTGGGGACAGACTAGCG 60.982 63.158 0.00 0.00 44.46 4.26
3854 4096 2.184579 GTGGGGACAGACTAGCGC 59.815 66.667 0.00 0.00 44.46 5.92
3855 4097 3.449227 TGGGGACAGACTAGCGCG 61.449 66.667 0.00 0.00 35.01 6.86
3856 4098 3.138798 GGGGACAGACTAGCGCGA 61.139 66.667 12.10 0.00 0.00 5.87
3857 4099 2.491022 GGGGACAGACTAGCGCGAT 61.491 63.158 12.10 5.99 0.00 4.58
3858 4100 1.437986 GGGACAGACTAGCGCGATT 59.562 57.895 12.10 0.00 0.00 3.34
3859 4101 0.595310 GGGACAGACTAGCGCGATTC 60.595 60.000 12.10 0.00 0.00 2.52
3860 4102 0.930742 GGACAGACTAGCGCGATTCG 60.931 60.000 12.10 0.62 42.12 3.34
3861 4103 0.248134 GACAGACTAGCGCGATTCGT 60.248 55.000 12.10 4.04 41.07 3.85
3862 4104 1.004185 GACAGACTAGCGCGATTCGTA 60.004 52.381 12.10 0.00 41.07 3.43
3863 4105 1.267932 ACAGACTAGCGCGATTCGTAC 60.268 52.381 12.10 0.20 41.07 3.67
3864 4106 0.042361 AGACTAGCGCGATTCGTACG 60.042 55.000 12.10 9.53 41.07 3.67
3870 4112 3.665531 GCGATTCGTACGCGGACG 61.666 66.667 37.04 37.04 46.05 4.79
3881 4123 3.773591 CGCGGACGTAAATAAGCAC 57.226 52.632 0.00 0.00 33.53 4.40
3882 4124 0.044499 CGCGGACGTAAATAAGCACG 60.044 55.000 0.00 0.00 43.63 5.34
3890 4132 4.037858 CGTAAATAAGCACGTACTCCCT 57.962 45.455 0.00 0.00 33.56 4.20
3891 4133 4.040376 CGTAAATAAGCACGTACTCCCTC 58.960 47.826 0.00 0.00 33.56 4.30
3892 4134 3.538634 AAATAAGCACGTACTCCCTCC 57.461 47.619 0.00 0.00 0.00 4.30
3893 4135 1.030457 ATAAGCACGTACTCCCTCCG 58.970 55.000 0.00 0.00 0.00 4.63
3894 4136 0.322816 TAAGCACGTACTCCCTCCGT 60.323 55.000 0.00 0.00 34.71 4.69
3895 4137 1.593296 AAGCACGTACTCCCTCCGTC 61.593 60.000 0.00 0.00 31.46 4.79
3896 4138 3.061260 GCACGTACTCCCTCCGTCC 62.061 68.421 0.00 0.00 31.46 4.79
3897 4139 1.676635 CACGTACTCCCTCCGTCCA 60.677 63.158 0.00 0.00 31.46 4.02
3898 4140 1.378250 ACGTACTCCCTCCGTCCAG 60.378 63.158 0.00 0.00 0.00 3.86
3899 4141 1.077930 CGTACTCCCTCCGTCCAGA 60.078 63.158 0.00 0.00 0.00 3.86
3900 4142 0.679002 CGTACTCCCTCCGTCCAGAA 60.679 60.000 0.00 0.00 0.00 3.02
3901 4143 1.553706 GTACTCCCTCCGTCCAGAAA 58.446 55.000 0.00 0.00 0.00 2.52
3902 4144 2.108970 GTACTCCCTCCGTCCAGAAAT 58.891 52.381 0.00 0.00 0.00 2.17
3903 4145 2.544844 ACTCCCTCCGTCCAGAAATA 57.455 50.000 0.00 0.00 0.00 1.40
3904 4146 2.108970 ACTCCCTCCGTCCAGAAATAC 58.891 52.381 0.00 0.00 0.00 1.89
3905 4147 2.292323 ACTCCCTCCGTCCAGAAATACT 60.292 50.000 0.00 0.00 0.00 2.12
3906 4148 2.766828 CTCCCTCCGTCCAGAAATACTT 59.233 50.000 0.00 0.00 0.00 2.24
3907 4149 2.500098 TCCCTCCGTCCAGAAATACTTG 59.500 50.000 0.00 0.00 0.00 3.16
3908 4150 2.236395 CCCTCCGTCCAGAAATACTTGT 59.764 50.000 0.00 0.00 0.00 3.16
3909 4151 3.522553 CCTCCGTCCAGAAATACTTGTC 58.477 50.000 0.00 0.00 0.00 3.18
3910 4152 3.056107 CCTCCGTCCAGAAATACTTGTCA 60.056 47.826 0.00 0.00 0.00 3.58
3911 4153 4.383118 CCTCCGTCCAGAAATACTTGTCAT 60.383 45.833 0.00 0.00 0.00 3.06
3912 4154 5.160607 TCCGTCCAGAAATACTTGTCATT 57.839 39.130 0.00 0.00 0.00 2.57
3913 4155 4.935205 TCCGTCCAGAAATACTTGTCATTG 59.065 41.667 0.00 0.00 0.00 2.82
3914 4156 4.935205 CCGTCCAGAAATACTTGTCATTGA 59.065 41.667 0.00 0.00 0.00 2.57
3915 4157 5.411361 CCGTCCAGAAATACTTGTCATTGAA 59.589 40.000 0.00 0.00 0.00 2.69
3916 4158 6.072728 CCGTCCAGAAATACTTGTCATTGAAA 60.073 38.462 0.00 0.00 0.00 2.69
3917 4159 7.362056 CCGTCCAGAAATACTTGTCATTGAAAT 60.362 37.037 0.00 0.00 0.00 2.17
3918 4160 7.482743 CGTCCAGAAATACTTGTCATTGAAATG 59.517 37.037 0.00 0.00 37.75 2.32
3919 4161 7.756722 GTCCAGAAATACTTGTCATTGAAATGG 59.243 37.037 3.31 0.00 37.03 3.16
3920 4162 7.669304 TCCAGAAATACTTGTCATTGAAATGGA 59.331 33.333 3.31 0.00 37.03 3.41
3921 4163 8.472413 CCAGAAATACTTGTCATTGAAATGGAT 58.528 33.333 3.31 0.00 37.03 3.41
3922 4164 9.297586 CAGAAATACTTGTCATTGAAATGGATG 57.702 33.333 3.31 0.00 37.03 3.51
3923 4165 9.028284 AGAAATACTTGTCATTGAAATGGATGT 57.972 29.630 3.31 2.77 37.03 3.06
3927 4169 9.857656 ATACTTGTCATTGAAATGGATGTATCT 57.142 29.630 3.31 0.00 37.03 1.98
3929 4171 9.334947 ACTTGTCATTGAAATGGATGTATCTAG 57.665 33.333 3.31 0.00 37.03 2.43
3930 4172 9.551734 CTTGTCATTGAAATGGATGTATCTAGA 57.448 33.333 0.00 0.00 37.03 2.43
3932 4174 9.498176 TGTCATTGAAATGGATGTATCTAGATG 57.502 33.333 15.79 0.00 37.03 2.90
3933 4175 8.449397 GTCATTGAAATGGATGTATCTAGATGC 58.551 37.037 15.79 14.54 37.03 3.91
3934 4176 8.158789 TCATTGAAATGGATGTATCTAGATGCA 58.841 33.333 23.38 23.38 36.22 3.96
3935 4177 8.957466 CATTGAAATGGATGTATCTAGATGCAT 58.043 33.333 29.54 29.54 44.84 3.96
3936 4178 8.929260 TTGAAATGGATGTATCTAGATGCATT 57.071 30.769 29.66 18.35 45.31 3.56
3943 4185 9.276590 TGGATGTATCTAGATGCATTTAAGTTG 57.723 33.333 29.66 0.00 42.77 3.16
3944 4186 8.725148 GGATGTATCTAGATGCATTTAAGTTGG 58.275 37.037 29.66 0.00 42.77 3.77
3945 4187 7.496529 TGTATCTAGATGCATTTAAGTTGGC 57.503 36.000 18.36 0.00 0.00 4.52
3946 4188 6.486657 TGTATCTAGATGCATTTAAGTTGGCC 59.513 38.462 18.36 0.00 0.00 5.36
3947 4189 4.207165 TCTAGATGCATTTAAGTTGGCCC 58.793 43.478 0.00 0.00 0.00 5.80
3948 4190 2.818921 AGATGCATTTAAGTTGGCCCA 58.181 42.857 0.00 0.00 0.00 5.36
3949 4191 2.497273 AGATGCATTTAAGTTGGCCCAC 59.503 45.455 0.00 0.00 0.00 4.61
3950 4192 0.600557 TGCATTTAAGTTGGCCCACG 59.399 50.000 0.00 0.00 0.00 4.94
3951 4193 0.108851 GCATTTAAGTTGGCCCACGG 60.109 55.000 0.00 0.00 0.00 4.94
3973 4215 3.098555 CGTTGGCTGATAACGGGC 58.901 61.111 0.00 0.00 45.09 6.13
3977 4219 2.588034 GGCTGATAACGGGCGTCC 60.588 66.667 0.00 0.00 38.15 4.79
3978 4220 2.499685 GCTGATAACGGGCGTCCT 59.500 61.111 3.66 0.00 0.00 3.85
3979 4221 1.737816 GCTGATAACGGGCGTCCTA 59.262 57.895 3.66 0.00 0.00 2.94
3980 4222 0.317479 GCTGATAACGGGCGTCCTAT 59.683 55.000 3.66 0.00 0.00 2.57
3981 4223 1.542915 GCTGATAACGGGCGTCCTATA 59.457 52.381 3.66 0.00 0.00 1.31
3982 4224 2.029649 GCTGATAACGGGCGTCCTATAA 60.030 50.000 3.66 0.00 0.00 0.98
3983 4225 3.572584 CTGATAACGGGCGTCCTATAAC 58.427 50.000 3.66 0.00 0.00 1.89
3984 4226 2.957680 TGATAACGGGCGTCCTATAACA 59.042 45.455 3.66 0.00 0.00 2.41
3985 4227 3.575256 TGATAACGGGCGTCCTATAACAT 59.425 43.478 3.66 0.00 0.00 2.71
3986 4228 2.234300 AACGGGCGTCCTATAACATG 57.766 50.000 3.66 0.00 0.00 3.21
3987 4229 1.117150 ACGGGCGTCCTATAACATGT 58.883 50.000 3.66 0.00 0.00 3.21
3988 4230 1.483415 ACGGGCGTCCTATAACATGTT 59.517 47.619 16.68 16.68 0.00 2.71
3989 4231 2.132762 CGGGCGTCCTATAACATGTTC 58.867 52.381 15.85 0.00 0.00 3.18
3990 4232 2.482316 CGGGCGTCCTATAACATGTTCA 60.482 50.000 15.85 3.41 0.00 3.18
3991 4233 3.131396 GGGCGTCCTATAACATGTTCAG 58.869 50.000 15.85 13.14 0.00 3.02
3992 4234 3.431766 GGGCGTCCTATAACATGTTCAGT 60.432 47.826 15.85 5.36 0.00 3.41
3993 4235 4.189231 GGCGTCCTATAACATGTTCAGTT 58.811 43.478 15.85 1.55 0.00 3.16
3994 4236 4.034048 GGCGTCCTATAACATGTTCAGTTG 59.966 45.833 15.85 3.96 0.00 3.16
3995 4237 4.034048 GCGTCCTATAACATGTTCAGTTGG 59.966 45.833 15.85 12.46 0.00 3.77
3996 4238 5.175859 CGTCCTATAACATGTTCAGTTGGT 58.824 41.667 15.85 0.00 0.00 3.67
3997 4239 6.334989 CGTCCTATAACATGTTCAGTTGGTA 58.665 40.000 15.85 0.00 0.00 3.25
3998 4240 6.255020 CGTCCTATAACATGTTCAGTTGGTAC 59.745 42.308 15.85 11.03 0.00 3.34
3999 4241 7.101054 GTCCTATAACATGTTCAGTTGGTACA 58.899 38.462 15.85 0.00 0.00 2.90
4000 4242 7.277981 GTCCTATAACATGTTCAGTTGGTACAG 59.722 40.741 15.85 0.00 42.39 2.74
4001 4243 7.179516 TCCTATAACATGTTCAGTTGGTACAGA 59.820 37.037 15.85 1.66 42.39 3.41
4002 4244 7.987458 CCTATAACATGTTCAGTTGGTACAGAT 59.013 37.037 15.85 0.60 42.39 2.90
4004 4246 8.948631 ATAACATGTTCAGTTGGTACAGATAG 57.051 34.615 15.85 0.00 42.39 2.08
4005 4247 6.605471 ACATGTTCAGTTGGTACAGATAGA 57.395 37.500 0.00 0.00 42.39 1.98
4006 4248 7.187824 ACATGTTCAGTTGGTACAGATAGAT 57.812 36.000 0.00 0.00 42.39 1.98
4007 4249 7.044181 ACATGTTCAGTTGGTACAGATAGATG 58.956 38.462 0.00 0.00 42.39 2.90
4008 4250 5.419542 TGTTCAGTTGGTACAGATAGATGC 58.580 41.667 0.00 0.00 42.39 3.91
4009 4251 5.046663 TGTTCAGTTGGTACAGATAGATGCA 60.047 40.000 0.00 0.00 42.39 3.96
4010 4252 5.876651 TCAGTTGGTACAGATAGATGCAT 57.123 39.130 0.00 0.00 42.39 3.96
4011 4253 6.976934 TCAGTTGGTACAGATAGATGCATA 57.023 37.500 0.00 0.00 42.39 3.14
4012 4254 6.749139 TCAGTTGGTACAGATAGATGCATAC 58.251 40.000 0.00 0.00 42.39 2.39
4013 4255 5.631096 CAGTTGGTACAGATAGATGCATACG 59.369 44.000 0.00 0.00 42.39 3.06
4014 4256 4.783764 TGGTACAGATAGATGCATACGG 57.216 45.455 0.00 0.00 0.00 4.02
4015 4257 4.149598 TGGTACAGATAGATGCATACGGT 58.850 43.478 0.00 1.71 0.00 4.83
4016 4258 5.318630 TGGTACAGATAGATGCATACGGTA 58.681 41.667 0.00 0.76 0.00 4.02
4017 4259 5.182570 TGGTACAGATAGATGCATACGGTAC 59.817 44.000 18.02 18.02 33.76 3.34
4018 4260 5.182570 GGTACAGATAGATGCATACGGTACA 59.817 44.000 22.71 0.00 35.24 2.90
4019 4261 5.378292 ACAGATAGATGCATACGGTACAG 57.622 43.478 0.00 0.00 0.00 2.74
4020 4262 4.218635 ACAGATAGATGCATACGGTACAGG 59.781 45.833 0.00 0.00 0.00 4.00
4021 4263 4.218635 CAGATAGATGCATACGGTACAGGT 59.781 45.833 0.00 0.00 0.00 4.00
4022 4264 4.833380 AGATAGATGCATACGGTACAGGTT 59.167 41.667 0.00 0.00 0.00 3.50
4023 4265 3.906720 AGATGCATACGGTACAGGTTT 57.093 42.857 0.00 0.00 0.00 3.27
4024 4266 4.216411 AGATGCATACGGTACAGGTTTT 57.784 40.909 0.00 0.00 0.00 2.43
4025 4267 3.938963 AGATGCATACGGTACAGGTTTTG 59.061 43.478 0.00 0.00 0.00 2.44
4026 4268 3.128852 TGCATACGGTACAGGTTTTGT 57.871 42.857 0.00 0.00 43.96 2.83
4027 4269 4.268797 TGCATACGGTACAGGTTTTGTA 57.731 40.909 0.00 0.00 41.29 2.41
4035 4277 2.445682 ACAGGTTTTGTACAGGGCAA 57.554 45.000 0.00 0.00 38.56 4.52
4036 4278 2.028876 ACAGGTTTTGTACAGGGCAAC 58.971 47.619 0.00 0.00 38.56 4.17
4037 4279 1.001815 CAGGTTTTGTACAGGGCAACG 60.002 52.381 0.00 0.00 37.60 4.10
4038 4280 1.026584 GGTTTTGTACAGGGCAACGT 58.973 50.000 0.00 0.00 37.60 3.99
4039 4281 1.406180 GGTTTTGTACAGGGCAACGTT 59.594 47.619 0.00 0.00 37.60 3.99
4040 4282 2.159212 GGTTTTGTACAGGGCAACGTTT 60.159 45.455 0.00 0.00 37.60 3.60
4041 4283 3.513662 GTTTTGTACAGGGCAACGTTTT 58.486 40.909 0.00 0.00 37.60 2.43
4042 4284 2.853731 TTGTACAGGGCAACGTTTTG 57.146 45.000 0.00 0.00 35.62 2.44
4054 4296 4.884257 CAACGTTTTGCATGGACATAAC 57.116 40.909 0.00 0.00 0.00 1.89
4059 4301 3.419264 TTTGCATGGACATAACGATGC 57.581 42.857 0.00 0.00 46.67 3.91
4060 4302 3.734683 GCATGGACATAACGATGCG 57.265 52.632 0.00 0.00 40.70 4.73
4061 4303 0.384725 GCATGGACATAACGATGCGC 60.385 55.000 0.00 0.00 40.70 6.09
4062 4304 0.936600 CATGGACATAACGATGCGCA 59.063 50.000 14.96 14.96 36.43 6.09
4063 4305 1.330213 CATGGACATAACGATGCGCAA 59.670 47.619 17.11 0.00 36.43 4.85
4064 4306 1.662517 TGGACATAACGATGCGCAAT 58.337 45.000 17.11 2.42 36.43 3.56
4065 4307 2.827652 TGGACATAACGATGCGCAATA 58.172 42.857 17.11 6.08 36.43 1.90
4066 4308 3.398406 TGGACATAACGATGCGCAATAT 58.602 40.909 17.11 8.36 36.43 1.28
4067 4309 3.186205 TGGACATAACGATGCGCAATATG 59.814 43.478 17.11 21.27 36.43 1.78
4068 4310 3.431912 GGACATAACGATGCGCAATATGA 59.568 43.478 27.71 12.88 36.43 2.15
4069 4311 4.386230 GACATAACGATGCGCAATATGAC 58.614 43.478 27.71 21.84 36.43 3.06
4070 4312 3.121025 ACATAACGATGCGCAATATGACG 60.121 43.478 27.71 21.63 36.43 4.35
4071 4313 0.581529 AACGATGCGCAATATGACGG 59.418 50.000 17.11 0.00 0.00 4.79
4072 4314 0.249280 ACGATGCGCAATATGACGGA 60.249 50.000 17.11 0.00 0.00 4.69
4073 4315 0.858583 CGATGCGCAATATGACGGAA 59.141 50.000 17.11 0.00 32.00 4.30
4074 4316 1.260297 CGATGCGCAATATGACGGAAA 59.740 47.619 17.11 0.00 32.00 3.13
4075 4317 2.639751 GATGCGCAATATGACGGAAAC 58.360 47.619 17.11 0.00 32.00 2.78
4090 4332 1.947456 GGAAACGATATCTGCAACCCC 59.053 52.381 0.34 0.00 0.00 4.95
4091 4333 2.639065 GAAACGATATCTGCAACCCCA 58.361 47.619 0.34 0.00 0.00 4.96
4092 4334 2.332063 AACGATATCTGCAACCCCAG 57.668 50.000 0.34 0.00 0.00 4.45
4093 4335 0.469917 ACGATATCTGCAACCCCAGG 59.530 55.000 0.34 0.00 33.64 4.45
4094 4336 0.758734 CGATATCTGCAACCCCAGGA 59.241 55.000 0.34 0.00 33.64 3.86
4095 4337 1.270518 CGATATCTGCAACCCCAGGAG 60.271 57.143 0.34 0.00 33.64 3.69
4096 4338 2.050144 GATATCTGCAACCCCAGGAGA 58.950 52.381 0.00 0.00 37.85 3.71
4097 4339 1.965414 TATCTGCAACCCCAGGAGAA 58.035 50.000 0.00 0.00 37.01 2.87
4098 4340 0.622665 ATCTGCAACCCCAGGAGAAG 59.377 55.000 0.00 0.00 37.01 2.85
4099 4341 1.676967 CTGCAACCCCAGGAGAAGC 60.677 63.158 0.00 0.00 0.00 3.86
4100 4342 2.416107 CTGCAACCCCAGGAGAAGCA 62.416 60.000 0.00 0.00 0.00 3.91
4101 4343 1.973812 GCAACCCCAGGAGAAGCAC 60.974 63.158 0.00 0.00 0.00 4.40
4102 4344 1.455849 CAACCCCAGGAGAAGCACA 59.544 57.895 0.00 0.00 0.00 4.57
4103 4345 0.890996 CAACCCCAGGAGAAGCACAC 60.891 60.000 0.00 0.00 0.00 3.82
4104 4346 1.062488 AACCCCAGGAGAAGCACACT 61.062 55.000 0.00 0.00 0.00 3.55
4105 4347 0.178903 ACCCCAGGAGAAGCACACTA 60.179 55.000 0.00 0.00 0.00 2.74
4106 4348 0.250513 CCCCAGGAGAAGCACACTAC 59.749 60.000 0.00 0.00 0.00 2.73
4107 4349 0.250513 CCCAGGAGAAGCACACTACC 59.749 60.000 0.00 0.00 0.00 3.18
4108 4350 0.108615 CCAGGAGAAGCACACTACCG 60.109 60.000 0.00 0.00 0.00 4.02
4109 4351 0.737715 CAGGAGAAGCACACTACCGC 60.738 60.000 0.00 0.00 0.00 5.68
4110 4352 0.900647 AGGAGAAGCACACTACCGCT 60.901 55.000 0.00 0.00 41.20 5.52
4111 4353 0.458716 GGAGAAGCACACTACCGCTC 60.459 60.000 0.00 0.00 37.54 5.03
4112 4354 0.458716 GAGAAGCACACTACCGCTCC 60.459 60.000 0.00 0.00 37.54 4.70
4113 4355 1.805945 GAAGCACACTACCGCTCCG 60.806 63.158 0.00 0.00 37.54 4.63
4114 4356 2.209064 GAAGCACACTACCGCTCCGA 62.209 60.000 0.00 0.00 37.54 4.55
4115 4357 1.812686 AAGCACACTACCGCTCCGAA 61.813 55.000 0.00 0.00 37.54 4.30
4116 4358 1.373748 GCACACTACCGCTCCGAAA 60.374 57.895 0.00 0.00 0.00 3.46
4117 4359 1.352156 GCACACTACCGCTCCGAAAG 61.352 60.000 0.00 0.00 0.00 2.62
4138 4380 3.441496 CTTGAACAAGCAAGCCAAGAA 57.559 42.857 1.60 0.00 38.85 2.52
4139 4381 3.784338 CTTGAACAAGCAAGCCAAGAAA 58.216 40.909 1.60 0.00 38.85 2.52
4140 4382 3.883830 TGAACAAGCAAGCCAAGAAAA 57.116 38.095 0.00 0.00 0.00 2.29
4141 4383 4.405116 TGAACAAGCAAGCCAAGAAAAT 57.595 36.364 0.00 0.00 0.00 1.82
4142 4384 4.370917 TGAACAAGCAAGCCAAGAAAATC 58.629 39.130 0.00 0.00 0.00 2.17
4143 4385 4.141981 TGAACAAGCAAGCCAAGAAAATCA 60.142 37.500 0.00 0.00 0.00 2.57
4144 4386 4.405116 ACAAGCAAGCCAAGAAAATCAA 57.595 36.364 0.00 0.00 0.00 2.57
4145 4387 4.122046 ACAAGCAAGCCAAGAAAATCAAC 58.878 39.130 0.00 0.00 0.00 3.18
4146 4388 3.391506 AGCAAGCCAAGAAAATCAACC 57.608 42.857 0.00 0.00 0.00 3.77
4147 4389 2.061028 GCAAGCCAAGAAAATCAACCG 58.939 47.619 0.00 0.00 0.00 4.44
4148 4390 2.676076 CAAGCCAAGAAAATCAACCGG 58.324 47.619 0.00 0.00 0.00 5.28
4149 4391 1.256812 AGCCAAGAAAATCAACCGGG 58.743 50.000 6.32 0.00 0.00 5.73
4150 4392 0.246360 GCCAAGAAAATCAACCGGGG 59.754 55.000 6.32 0.00 0.00 5.73
4151 4393 1.917872 CCAAGAAAATCAACCGGGGA 58.082 50.000 6.32 2.83 0.00 4.81
4152 4394 1.544246 CCAAGAAAATCAACCGGGGAC 59.456 52.381 6.32 0.00 0.00 4.46
4165 4407 3.120796 GGGGACCGAAAAACCAACT 57.879 52.632 0.00 0.00 40.86 3.16
4166 4408 0.671796 GGGGACCGAAAAACCAACTG 59.328 55.000 0.00 0.00 40.86 3.16
4167 4409 0.671796 GGGACCGAAAAACCAACTGG 59.328 55.000 0.00 0.00 42.17 4.00
4168 4410 0.031585 GGACCGAAAAACCAACTGGC 59.968 55.000 0.00 0.00 39.32 4.85
4169 4411 1.029681 GACCGAAAAACCAACTGGCT 58.970 50.000 0.00 0.00 39.32 4.75
4170 4412 1.407618 GACCGAAAAACCAACTGGCTT 59.592 47.619 0.00 0.00 39.32 4.35
4171 4413 1.136110 ACCGAAAAACCAACTGGCTTG 59.864 47.619 0.00 0.00 39.32 4.01
4172 4414 1.136110 CCGAAAAACCAACTGGCTTGT 59.864 47.619 0.00 0.00 39.32 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
58 59 0.753111 GCGCTGATTCCAAATCCCCT 60.753 55.000 0.00 0.00 0.00 4.79
499 500 0.035317 TCTGAAACATCTGGCACGCT 59.965 50.000 0.00 0.00 0.00 5.07
573 574 2.466846 CAGCAGCTGGTTGTTTCTTTG 58.533 47.619 17.45 0.00 0.00 2.77
575 576 1.035139 CCAGCAGCTGGTTGTTTCTT 58.965 50.000 30.97 0.00 45.82 2.52
604 605 8.369424 AGAAGACCTCTTTCTAAGAACTTAACC 58.631 37.037 0.00 0.00 37.02 2.85
613 614 7.928706 TCTTGTTTCAGAAGACCTCTTTCTAAG 59.071 37.037 0.00 0.00 36.11 2.18
659 667 3.867493 ACACATGATACATCAGCTTGTCG 59.133 43.478 0.00 0.00 40.64 4.35
664 673 6.238842 GCCAATAAACACATGATACATCAGCT 60.239 38.462 0.00 0.00 40.64 4.24
666 675 7.030075 TGCCAATAAACACATGATACATCAG 57.970 36.000 0.00 0.00 40.64 2.90
716 808 5.354842 TGCATCTGATTCTGAATCTCAGT 57.645 39.130 25.83 10.71 44.58 3.41
783 877 9.238368 CCAACTGAACCCAAAACTATAAATCTA 57.762 33.333 0.00 0.00 0.00 1.98
787 881 8.631797 GTTACCAACTGAACCCAAAACTATAAA 58.368 33.333 0.00 0.00 0.00 1.40
790 884 5.239963 CGTTACCAACTGAACCCAAAACTAT 59.760 40.000 0.00 0.00 0.00 2.12
824 921 6.334202 TGGTTGTGAATAAGTTGGTGAAAAC 58.666 36.000 0.00 0.00 0.00 2.43
826 923 5.451242 GCTGGTTGTGAATAAGTTGGTGAAA 60.451 40.000 0.00 0.00 0.00 2.69
1341 1458 3.202906 AGACGTTGTTTCTAAGCAGCAA 58.797 40.909 0.00 0.00 0.00 3.91
1356 1473 2.987149 CGCATACAAGTGAGAAGACGTT 59.013 45.455 0.00 0.00 0.00 3.99
1606 1723 4.016629 CAAACGCGAGCAGCTGCA 62.017 61.111 38.24 0.00 45.59 4.41
1811 1928 0.464036 TCCAGATGATGTACGCCCAC 59.536 55.000 0.00 0.00 0.00 4.61
1837 1954 2.036733 CCAGTCCACGTCTCCTTACAAA 59.963 50.000 0.00 0.00 0.00 2.83
1962 2079 5.652994 AACAAGCAAGAACTACCAAACAA 57.347 34.783 0.00 0.00 0.00 2.83
2042 2159 0.868406 GGAAACCAGTCAGAAGCACG 59.132 55.000 0.00 0.00 0.00 5.34
2057 2174 2.415983 TCTCTGAGTTGGGGAGGAAA 57.584 50.000 4.32 0.00 0.00 3.13
2150 2267 8.687242 TGAAGATACGATCAGACATTAGAACTT 58.313 33.333 0.00 0.00 0.00 2.66
2204 2348 5.620206 TGGAACAAGTCAAAGAGATAGCAA 58.380 37.500 0.00 0.00 31.92 3.91
2205 2349 5.227569 TGGAACAAGTCAAAGAGATAGCA 57.772 39.130 0.00 0.00 31.92 3.49
2396 2561 1.566018 CCGACAACCTTGCGACCTTC 61.566 60.000 0.00 0.00 32.28 3.46
2773 2940 1.484240 CAGGCTTGTTTTGAACCCCAA 59.516 47.619 0.00 0.00 0.00 4.12
2826 2993 6.787085 AGAGGTTAACTGAAGACGAAATTG 57.213 37.500 5.42 0.00 0.00 2.32
2833 3000 6.398918 TGCAAGATAGAGGTTAACTGAAGAC 58.601 40.000 5.42 0.00 0.00 3.01
2887 3066 4.641989 CAGATCCCCTGAATTACCACAAAG 59.358 45.833 0.00 0.00 45.78 2.77
2920 3101 0.106519 GCACTGCCACCCCTATGATT 60.107 55.000 0.00 0.00 0.00 2.57
3053 3238 2.512286 CGCCATGAGCACCACGAT 60.512 61.111 0.00 0.00 44.04 3.73
3073 3261 2.221749 CACACATACATGACATAGCCGC 59.778 50.000 0.00 0.00 0.00 6.53
3164 3358 1.219935 GGCCCGGTCATTAGACGTT 59.780 57.895 0.00 0.00 45.92 3.99
3244 3438 2.091775 GCTACTACTTCCTCCCTCCTCA 60.092 54.545 0.00 0.00 0.00 3.86
3251 3445 1.137282 GCACCAGCTACTACTTCCTCC 59.863 57.143 0.00 0.00 37.91 4.30
3252 3446 1.137282 GGCACCAGCTACTACTTCCTC 59.863 57.143 0.00 0.00 41.70 3.71
3253 3447 1.196012 GGCACCAGCTACTACTTCCT 58.804 55.000 0.00 0.00 41.70 3.36
3574 3816 4.978186 GCATCATGCATGTATGTATCCAC 58.022 43.478 25.43 10.23 44.26 4.02
3619 3861 2.920912 AACTCGGGAGGCCGTTGA 60.921 61.111 0.00 0.00 34.52 3.18
3639 3881 5.761165 ATTTAGAACGGAGAGAGTAGCTC 57.239 43.478 0.00 0.00 44.29 4.09
3646 3888 6.197276 CGACGAATAATTTAGAACGGAGAGA 58.803 40.000 0.00 0.00 0.00 3.10
3648 3890 4.736793 GCGACGAATAATTTAGAACGGAGA 59.263 41.667 0.00 0.00 0.00 3.71
3657 3899 6.912203 TCCATTTCAGCGACGAATAATTTA 57.088 33.333 0.00 0.00 0.00 1.40
3658 3900 5.811399 TCCATTTCAGCGACGAATAATTT 57.189 34.783 0.00 0.00 0.00 1.82
3664 3906 2.093306 ACATCCATTTCAGCGACGAA 57.907 45.000 0.00 0.00 0.00 3.85
3665 3907 2.951457 TACATCCATTTCAGCGACGA 57.049 45.000 0.00 0.00 0.00 4.20
3666 3908 3.384668 AGATACATCCATTTCAGCGACG 58.615 45.455 0.00 0.00 0.00 5.12
3667 3909 5.773575 TCTAGATACATCCATTTCAGCGAC 58.226 41.667 0.00 0.00 0.00 5.19
3668 3910 6.040955 AGTTCTAGATACATCCATTTCAGCGA 59.959 38.462 0.00 0.00 0.00 4.93
3669 3911 6.219473 AGTTCTAGATACATCCATTTCAGCG 58.781 40.000 0.00 0.00 0.00 5.18
3670 3912 9.547753 TTTAGTTCTAGATACATCCATTTCAGC 57.452 33.333 0.00 0.00 0.00 4.26
3698 3940 9.886132 TCGCAAGTATAGATGTATCTAGATGTA 57.114 33.333 15.79 4.44 39.75 2.29
3699 3941 8.670135 GTCGCAAGTATAGATGTATCTAGATGT 58.330 37.037 15.79 1.25 39.75 3.06
3700 3942 8.669243 TGTCGCAAGTATAGATGTATCTAGATG 58.331 37.037 15.79 0.00 39.75 2.90
3701 3943 8.794335 TGTCGCAAGTATAGATGTATCTAGAT 57.206 34.615 10.73 10.73 39.75 1.98
3702 3944 8.617290 TTGTCGCAAGTATAGATGTATCTAGA 57.383 34.615 7.57 0.00 39.75 2.43
3703 3945 8.508062 ACTTGTCGCAAGTATAGATGTATCTAG 58.492 37.037 19.21 0.00 39.75 2.43
3704 3946 8.392372 ACTTGTCGCAAGTATAGATGTATCTA 57.608 34.615 19.21 4.22 40.29 1.98
3705 3947 7.278461 ACTTGTCGCAAGTATAGATGTATCT 57.722 36.000 19.21 0.00 38.75 1.98
3706 3948 9.627395 ATTACTTGTCGCAAGTATAGATGTATC 57.373 33.333 23.59 0.00 33.27 2.24
3707 3949 9.982651 AATTACTTGTCGCAAGTATAGATGTAT 57.017 29.630 23.59 14.31 33.27 2.29
3708 3950 9.459640 GAATTACTTGTCGCAAGTATAGATGTA 57.540 33.333 23.59 13.16 33.27 2.29
3709 3951 7.167635 CGAATTACTTGTCGCAAGTATAGATGT 59.832 37.037 23.59 11.70 33.27 3.06
3710 3952 7.358435 CCGAATTACTTGTCGCAAGTATAGATG 60.358 40.741 23.59 15.84 35.93 2.90
3711 3953 6.641314 CCGAATTACTTGTCGCAAGTATAGAT 59.359 38.462 23.59 15.77 35.93 1.98
3712 3954 5.975344 CCGAATTACTTGTCGCAAGTATAGA 59.025 40.000 23.59 14.66 35.93 1.98
3713 3955 5.975344 TCCGAATTACTTGTCGCAAGTATAG 59.025 40.000 23.59 17.04 35.93 1.31
3714 3956 5.893687 TCCGAATTACTTGTCGCAAGTATA 58.106 37.500 23.59 17.37 35.93 1.47
3715 3957 4.751060 TCCGAATTACTTGTCGCAAGTAT 58.249 39.130 23.59 14.96 35.93 2.12
3716 3958 4.177165 TCCGAATTACTTGTCGCAAGTA 57.823 40.909 20.95 20.95 35.93 2.24
3717 3959 3.034721 TCCGAATTACTTGTCGCAAGT 57.965 42.857 22.53 22.53 35.93 3.16
3718 3960 3.720920 CGTTCCGAATTACTTGTCGCAAG 60.721 47.826 15.16 15.16 35.93 4.01
3719 3961 2.156117 CGTTCCGAATTACTTGTCGCAA 59.844 45.455 0.00 0.00 35.93 4.85
3720 3962 1.722464 CGTTCCGAATTACTTGTCGCA 59.278 47.619 0.00 0.00 35.93 5.10
3721 3963 1.060122 CCGTTCCGAATTACTTGTCGC 59.940 52.381 0.00 0.00 35.93 5.19
3722 3964 2.597305 CTCCGTTCCGAATTACTTGTCG 59.403 50.000 0.00 0.00 37.01 4.35
3723 3965 2.928116 CCTCCGTTCCGAATTACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
3724 3966 2.354403 CCCTCCGTTCCGAATTACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
3725 3967 2.093869 TCCCTCCGTTCCGAATTACTTG 60.094 50.000 0.00 0.00 0.00 3.16
3726 3968 2.181975 TCCCTCCGTTCCGAATTACTT 58.818 47.619 0.00 0.00 0.00 2.24
3727 3969 1.856629 TCCCTCCGTTCCGAATTACT 58.143 50.000 0.00 0.00 0.00 2.24
3728 3970 2.678471 TTCCCTCCGTTCCGAATTAC 57.322 50.000 0.00 0.00 0.00 1.89
3729 3971 4.217510 TCTATTCCCTCCGTTCCGAATTA 58.782 43.478 0.00 0.00 0.00 1.40
3730 3972 3.036091 TCTATTCCCTCCGTTCCGAATT 58.964 45.455 0.00 0.00 0.00 2.17
3731 3973 2.674420 TCTATTCCCTCCGTTCCGAAT 58.326 47.619 0.00 0.00 0.00 3.34
3732 3974 2.148446 TCTATTCCCTCCGTTCCGAA 57.852 50.000 0.00 0.00 0.00 4.30
3733 3975 2.148446 TTCTATTCCCTCCGTTCCGA 57.852 50.000 0.00 0.00 0.00 4.55
3734 3976 2.822764 CTTTCTATTCCCTCCGTTCCG 58.177 52.381 0.00 0.00 0.00 4.30
3735 3977 2.093128 TGCTTTCTATTCCCTCCGTTCC 60.093 50.000 0.00 0.00 0.00 3.62
3736 3978 3.261981 TGCTTTCTATTCCCTCCGTTC 57.738 47.619 0.00 0.00 0.00 3.95
3737 3979 3.244770 TGTTGCTTTCTATTCCCTCCGTT 60.245 43.478 0.00 0.00 0.00 4.44
3738 3980 2.304761 TGTTGCTTTCTATTCCCTCCGT 59.695 45.455 0.00 0.00 0.00 4.69
3739 3981 2.985896 TGTTGCTTTCTATTCCCTCCG 58.014 47.619 0.00 0.00 0.00 4.63
3740 3982 5.930135 TCTATGTTGCTTTCTATTCCCTCC 58.070 41.667 0.00 0.00 0.00 4.30
3741 3983 7.220030 TGATCTATGTTGCTTTCTATTCCCTC 58.780 38.462 0.00 0.00 0.00 4.30
3742 3984 7.141758 TGATCTATGTTGCTTTCTATTCCCT 57.858 36.000 0.00 0.00 0.00 4.20
3743 3985 7.716998 TCTTGATCTATGTTGCTTTCTATTCCC 59.283 37.037 0.00 0.00 0.00 3.97
3744 3986 8.668510 TCTTGATCTATGTTGCTTTCTATTCC 57.331 34.615 0.00 0.00 0.00 3.01
3745 3987 9.539825 TCTCTTGATCTATGTTGCTTTCTATTC 57.460 33.333 0.00 0.00 0.00 1.75
3746 3988 9.545105 CTCTCTTGATCTATGTTGCTTTCTATT 57.455 33.333 0.00 0.00 0.00 1.73
3747 3989 8.703743 ACTCTCTTGATCTATGTTGCTTTCTAT 58.296 33.333 0.00 0.00 0.00 1.98
3748 3990 7.978414 CACTCTCTTGATCTATGTTGCTTTCTA 59.022 37.037 0.00 0.00 0.00 2.10
3749 3991 6.817641 CACTCTCTTGATCTATGTTGCTTTCT 59.182 38.462 0.00 0.00 0.00 2.52
3750 3992 6.036953 CCACTCTCTTGATCTATGTTGCTTTC 59.963 42.308 0.00 0.00 0.00 2.62
3751 3993 5.879223 CCACTCTCTTGATCTATGTTGCTTT 59.121 40.000 0.00 0.00 0.00 3.51
3752 3994 5.426504 CCACTCTCTTGATCTATGTTGCTT 58.573 41.667 0.00 0.00 0.00 3.91
3753 3995 4.682859 GCCACTCTCTTGATCTATGTTGCT 60.683 45.833 0.00 0.00 0.00 3.91
3754 3996 3.559242 GCCACTCTCTTGATCTATGTTGC 59.441 47.826 0.00 0.00 0.00 4.17
3755 3997 3.801050 CGCCACTCTCTTGATCTATGTTG 59.199 47.826 0.00 0.00 0.00 3.33
3756 3998 3.701542 TCGCCACTCTCTTGATCTATGTT 59.298 43.478 0.00 0.00 0.00 2.71
3757 3999 3.291584 TCGCCACTCTCTTGATCTATGT 58.708 45.455 0.00 0.00 0.00 2.29
3758 4000 3.998099 TCGCCACTCTCTTGATCTATG 57.002 47.619 0.00 0.00 0.00 2.23
3759 4001 4.157656 GCTATCGCCACTCTCTTGATCTAT 59.842 45.833 0.00 0.00 0.00 1.98
3760 4002 3.504134 GCTATCGCCACTCTCTTGATCTA 59.496 47.826 0.00 0.00 0.00 1.98
3761 4003 2.295909 GCTATCGCCACTCTCTTGATCT 59.704 50.000 0.00 0.00 0.00 2.75
3762 4004 2.671596 GCTATCGCCACTCTCTTGATC 58.328 52.381 0.00 0.00 0.00 2.92
3763 4005 1.000827 CGCTATCGCCACTCTCTTGAT 60.001 52.381 0.00 0.00 0.00 2.57
3764 4006 0.382158 CGCTATCGCCACTCTCTTGA 59.618 55.000 0.00 0.00 0.00 3.02
3765 4007 0.101399 ACGCTATCGCCACTCTCTTG 59.899 55.000 0.00 0.00 39.84 3.02
3766 4008 0.101399 CACGCTATCGCCACTCTCTT 59.899 55.000 0.00 0.00 39.84 2.85
3767 4009 1.729470 CCACGCTATCGCCACTCTCT 61.729 60.000 0.00 0.00 39.84 3.10
3768 4010 1.299468 CCACGCTATCGCCACTCTC 60.299 63.158 0.00 0.00 39.84 3.20
3769 4011 1.753078 TCCACGCTATCGCCACTCT 60.753 57.895 0.00 0.00 39.84 3.24
3770 4012 1.589196 GTCCACGCTATCGCCACTC 60.589 63.158 0.00 0.00 39.84 3.51
3771 4013 2.494918 GTCCACGCTATCGCCACT 59.505 61.111 0.00 0.00 39.84 4.00
3772 4014 2.954868 CGTCCACGCTATCGCCAC 60.955 66.667 0.00 0.00 39.84 5.01
3773 4015 3.120979 CTCGTCCACGCTATCGCCA 62.121 63.158 0.00 0.00 39.84 5.69
3774 4016 2.353607 CTCGTCCACGCTATCGCC 60.354 66.667 0.00 0.00 39.84 5.54
3775 4017 3.025176 GCTCGTCCACGCTATCGC 61.025 66.667 0.00 0.00 39.84 4.58
3776 4018 2.722548 CGCTCGTCCACGCTATCG 60.723 66.667 0.00 0.00 39.60 2.92
3788 4030 3.913573 CGGGATCAAACGCGCTCG 61.914 66.667 5.73 0.00 39.08 5.03
3789 4031 2.894240 TACCGGGATCAAACGCGCTC 62.894 60.000 5.73 0.00 43.07 5.03
3790 4032 3.009192 TACCGGGATCAAACGCGCT 62.009 57.895 5.73 0.00 43.07 5.92
3791 4033 2.509786 TACCGGGATCAAACGCGC 60.510 61.111 5.73 0.00 43.07 6.86
3792 4034 2.510594 CGTACCGGGATCAAACGCG 61.511 63.158 6.32 3.53 43.80 6.01
3793 4035 1.446618 ACGTACCGGGATCAAACGC 60.447 57.895 6.32 0.00 37.07 4.84
3794 4036 1.079875 CCACGTACCGGGATCAAACG 61.080 60.000 6.32 8.23 39.37 3.60
3795 4037 0.247185 TCCACGTACCGGGATCAAAC 59.753 55.000 6.32 0.00 28.17 2.93
3796 4038 0.247185 GTCCACGTACCGGGATCAAA 59.753 55.000 6.32 0.00 35.25 2.69
3797 4039 1.606885 GGTCCACGTACCGGGATCAA 61.607 60.000 6.32 0.00 34.33 2.57
3798 4040 2.053865 GGTCCACGTACCGGGATCA 61.054 63.158 6.32 0.00 34.33 2.92
3799 4041 1.606885 TTGGTCCACGTACCGGGATC 61.607 60.000 6.32 3.94 42.91 3.36
3800 4042 0.979187 ATTGGTCCACGTACCGGGAT 60.979 55.000 6.32 0.00 42.91 3.85
3801 4043 1.610086 ATTGGTCCACGTACCGGGA 60.610 57.895 6.32 0.00 42.91 5.14
3802 4044 1.448893 CATTGGTCCACGTACCGGG 60.449 63.158 6.32 0.00 42.91 5.73
3803 4045 1.448893 CCATTGGTCCACGTACCGG 60.449 63.158 0.00 0.00 42.91 5.28
3804 4046 0.459585 CTCCATTGGTCCACGTACCG 60.460 60.000 1.86 0.00 42.91 4.02
3805 4047 0.743345 GCTCCATTGGTCCACGTACC 60.743 60.000 1.86 0.20 40.19 3.34
3806 4048 0.036765 TGCTCCATTGGTCCACGTAC 60.037 55.000 1.86 0.00 0.00 3.67
3807 4049 0.687920 TTGCTCCATTGGTCCACGTA 59.312 50.000 1.86 0.00 0.00 3.57
3808 4050 0.606401 CTTGCTCCATTGGTCCACGT 60.606 55.000 1.86 0.00 0.00 4.49
3809 4051 0.606401 ACTTGCTCCATTGGTCCACG 60.606 55.000 1.86 2.04 0.00 4.94
3810 4052 1.168714 GACTTGCTCCATTGGTCCAC 58.831 55.000 1.86 0.00 0.00 4.02
3811 4053 0.321564 CGACTTGCTCCATTGGTCCA 60.322 55.000 1.86 0.00 0.00 4.02
3812 4054 0.321653 ACGACTTGCTCCATTGGTCC 60.322 55.000 1.86 0.00 0.00 4.46
3813 4055 1.523758 AACGACTTGCTCCATTGGTC 58.476 50.000 1.86 0.00 0.00 4.02
3814 4056 1.608590 CAAACGACTTGCTCCATTGGT 59.391 47.619 1.86 0.00 0.00 3.67
3815 4057 1.608590 ACAAACGACTTGCTCCATTGG 59.391 47.619 0.00 0.00 38.75 3.16
3816 4058 2.605338 CCACAAACGACTTGCTCCATTG 60.605 50.000 0.00 0.00 38.75 2.82
3817 4059 1.608590 CCACAAACGACTTGCTCCATT 59.391 47.619 0.00 0.00 38.75 3.16
3818 4060 1.238439 CCACAAACGACTTGCTCCAT 58.762 50.000 0.00 0.00 38.75 3.41
3819 4061 0.107410 ACCACAAACGACTTGCTCCA 60.107 50.000 0.00 0.00 38.75 3.86
3820 4062 0.307760 CACCACAAACGACTTGCTCC 59.692 55.000 0.00 0.00 38.75 4.70
3821 4063 0.307760 CCACCACAAACGACTTGCTC 59.692 55.000 0.00 0.00 38.75 4.26
3822 4064 1.101049 CCCACCACAAACGACTTGCT 61.101 55.000 0.00 0.00 38.75 3.91
3823 4065 1.358759 CCCACCACAAACGACTTGC 59.641 57.895 0.00 0.00 38.75 4.01
3824 4066 0.464735 TCCCCACCACAAACGACTTG 60.465 55.000 0.00 0.00 41.19 3.16
3825 4067 0.464916 GTCCCCACCACAAACGACTT 60.465 55.000 0.00 0.00 0.00 3.01
3826 4068 1.147600 GTCCCCACCACAAACGACT 59.852 57.895 0.00 0.00 0.00 4.18
3827 4069 1.153127 TGTCCCCACCACAAACGAC 60.153 57.895 0.00 0.00 0.00 4.34
3828 4070 1.147376 CTGTCCCCACCACAAACGA 59.853 57.895 0.00 0.00 0.00 3.85
3829 4071 1.147376 TCTGTCCCCACCACAAACG 59.853 57.895 0.00 0.00 0.00 3.60
3830 4072 0.182775 AGTCTGTCCCCACCACAAAC 59.817 55.000 0.00 0.00 0.00 2.93
3831 4073 1.697432 CTAGTCTGTCCCCACCACAAA 59.303 52.381 0.00 0.00 0.00 2.83
3832 4074 1.348064 CTAGTCTGTCCCCACCACAA 58.652 55.000 0.00 0.00 0.00 3.33
3833 4075 1.192146 GCTAGTCTGTCCCCACCACA 61.192 60.000 0.00 0.00 0.00 4.17
3834 4076 1.597461 GCTAGTCTGTCCCCACCAC 59.403 63.158 0.00 0.00 0.00 4.16
3835 4077 1.982395 CGCTAGTCTGTCCCCACCA 60.982 63.158 0.00 0.00 0.00 4.17
3836 4078 2.893398 CGCTAGTCTGTCCCCACC 59.107 66.667 0.00 0.00 0.00 4.61
3837 4079 2.184579 GCGCTAGTCTGTCCCCAC 59.815 66.667 0.00 0.00 0.00 4.61
3838 4080 3.449227 CGCGCTAGTCTGTCCCCA 61.449 66.667 5.56 0.00 0.00 4.96
3839 4081 2.017559 AATCGCGCTAGTCTGTCCCC 62.018 60.000 5.56 0.00 0.00 4.81
3840 4082 0.595310 GAATCGCGCTAGTCTGTCCC 60.595 60.000 5.56 0.00 0.00 4.46
3841 4083 0.930742 CGAATCGCGCTAGTCTGTCC 60.931 60.000 5.56 0.00 0.00 4.02
3842 4084 0.248134 ACGAATCGCGCTAGTCTGTC 60.248 55.000 5.56 0.00 46.04 3.51
3843 4085 1.012086 TACGAATCGCGCTAGTCTGT 58.988 50.000 5.56 8.77 46.04 3.41
3844 4086 1.386961 GTACGAATCGCGCTAGTCTG 58.613 55.000 5.56 2.80 46.04 3.51
3845 4087 0.042361 CGTACGAATCGCGCTAGTCT 60.042 55.000 10.44 0.00 46.04 3.24
3846 4088 1.586610 GCGTACGAATCGCGCTAGTC 61.587 60.000 21.65 1.67 46.55 2.59
3847 4089 1.653533 GCGTACGAATCGCGCTAGT 60.654 57.895 21.65 0.00 46.55 2.57
3848 4090 3.126957 GCGTACGAATCGCGCTAG 58.873 61.111 21.65 0.00 46.55 3.42
3853 4095 3.665531 CGTCCGCGTACGAATCGC 61.666 66.667 20.15 1.25 45.68 4.58
3863 4105 0.044499 CGTGCTTATTTACGTCCGCG 60.044 55.000 0.00 0.00 44.93 6.46
3864 4106 3.773591 CGTGCTTATTTACGTCCGC 57.226 52.632 0.00 0.00 35.70 5.54
3869 4111 4.037858 AGGGAGTACGTGCTTATTTACG 57.962 45.455 7.83 0.00 45.19 3.18
3870 4112 4.366586 GGAGGGAGTACGTGCTTATTTAC 58.633 47.826 7.83 0.00 0.00 2.01
3871 4113 3.067180 CGGAGGGAGTACGTGCTTATTTA 59.933 47.826 7.83 0.00 0.00 1.40
3872 4114 2.159142 CGGAGGGAGTACGTGCTTATTT 60.159 50.000 7.83 0.00 0.00 1.40
3873 4115 1.407979 CGGAGGGAGTACGTGCTTATT 59.592 52.381 7.83 0.00 0.00 1.40
3874 4116 1.030457 CGGAGGGAGTACGTGCTTAT 58.970 55.000 7.83 0.00 0.00 1.73
3875 4117 0.322816 ACGGAGGGAGTACGTGCTTA 60.323 55.000 7.83 0.00 39.64 3.09
3876 4118 1.593296 GACGGAGGGAGTACGTGCTT 61.593 60.000 7.83 0.00 41.40 3.91
3877 4119 2.035312 ACGGAGGGAGTACGTGCT 59.965 61.111 5.62 5.62 39.64 4.40
3878 4120 2.488820 GACGGAGGGAGTACGTGC 59.511 66.667 0.00 0.00 41.40 5.34
3879 4121 1.654954 CTGGACGGAGGGAGTACGTG 61.655 65.000 0.00 0.00 41.40 4.49
3880 4122 1.378250 CTGGACGGAGGGAGTACGT 60.378 63.158 0.00 0.00 44.35 3.57
3881 4123 0.679002 TTCTGGACGGAGGGAGTACG 60.679 60.000 0.00 0.00 0.00 3.67
3882 4124 1.553706 TTTCTGGACGGAGGGAGTAC 58.446 55.000 0.00 0.00 0.00 2.73
3883 4125 2.544844 ATTTCTGGACGGAGGGAGTA 57.455 50.000 0.00 0.00 0.00 2.59
3884 4126 2.108970 GTATTTCTGGACGGAGGGAGT 58.891 52.381 0.00 0.00 0.00 3.85
3885 4127 2.389715 AGTATTTCTGGACGGAGGGAG 58.610 52.381 0.00 0.00 0.00 4.30
3886 4128 2.500098 CAAGTATTTCTGGACGGAGGGA 59.500 50.000 0.00 0.00 0.00 4.20
3887 4129 2.236395 ACAAGTATTTCTGGACGGAGGG 59.764 50.000 0.00 0.00 0.00 4.30
3888 4130 3.056107 TGACAAGTATTTCTGGACGGAGG 60.056 47.826 0.00 0.00 0.00 4.30
3889 4131 4.188247 TGACAAGTATTTCTGGACGGAG 57.812 45.455 0.00 0.00 0.00 4.63
3890 4132 4.819105 ATGACAAGTATTTCTGGACGGA 57.181 40.909 0.00 0.00 0.00 4.69
3891 4133 4.935205 TCAATGACAAGTATTTCTGGACGG 59.065 41.667 0.00 0.00 0.00 4.79
3892 4134 6.480524 TTCAATGACAAGTATTTCTGGACG 57.519 37.500 0.00 0.00 0.00 4.79
3893 4135 7.756722 CCATTTCAATGACAAGTATTTCTGGAC 59.243 37.037 0.81 0.00 38.70 4.02
3894 4136 7.669304 TCCATTTCAATGACAAGTATTTCTGGA 59.331 33.333 0.81 0.00 38.70 3.86
3895 4137 7.829725 TCCATTTCAATGACAAGTATTTCTGG 58.170 34.615 0.81 0.00 38.70 3.86
3896 4138 9.297586 CATCCATTTCAATGACAAGTATTTCTG 57.702 33.333 0.81 0.00 38.70 3.02
3897 4139 9.028284 ACATCCATTTCAATGACAAGTATTTCT 57.972 29.630 0.81 0.00 38.70 2.52
3901 4143 9.857656 AGATACATCCATTTCAATGACAAGTAT 57.142 29.630 0.81 4.50 38.70 2.12
3903 4145 9.334947 CTAGATACATCCATTTCAATGACAAGT 57.665 33.333 0.81 0.00 38.70 3.16
3904 4146 9.551734 TCTAGATACATCCATTTCAATGACAAG 57.448 33.333 0.81 0.00 38.70 3.16
3906 4148 9.498176 CATCTAGATACATCCATTTCAATGACA 57.502 33.333 4.54 0.00 38.70 3.58
3907 4149 8.449397 GCATCTAGATACATCCATTTCAATGAC 58.551 37.037 4.54 0.00 38.70 3.06
3908 4150 8.158789 TGCATCTAGATACATCCATTTCAATGA 58.841 33.333 4.54 0.00 38.70 2.57
3909 4151 8.331730 TGCATCTAGATACATCCATTTCAATG 57.668 34.615 4.54 0.00 36.17 2.82
3910 4152 9.529823 AATGCATCTAGATACATCCATTTCAAT 57.470 29.630 17.09 0.00 0.00 2.57
3911 4153 8.929260 AATGCATCTAGATACATCCATTTCAA 57.071 30.769 17.09 0.00 0.00 2.69
3912 4154 8.929260 AAATGCATCTAGATACATCCATTTCA 57.071 30.769 17.09 0.00 28.73 2.69
3917 4159 9.276590 CAACTTAAATGCATCTAGATACATCCA 57.723 33.333 17.09 7.02 0.00 3.41
3918 4160 8.725148 CCAACTTAAATGCATCTAGATACATCC 58.275 37.037 17.09 0.50 0.00 3.51
3919 4161 8.233190 GCCAACTTAAATGCATCTAGATACATC 58.767 37.037 17.09 3.39 0.00 3.06
3920 4162 7.175641 GGCCAACTTAAATGCATCTAGATACAT 59.824 37.037 12.00 12.00 0.00 2.29
3921 4163 6.486657 GGCCAACTTAAATGCATCTAGATACA 59.513 38.462 8.11 8.11 0.00 2.29
3922 4164 6.072452 GGGCCAACTTAAATGCATCTAGATAC 60.072 42.308 4.39 0.00 0.00 2.24
3923 4165 6.003950 GGGCCAACTTAAATGCATCTAGATA 58.996 40.000 4.39 0.00 0.00 1.98
3924 4166 4.829492 GGGCCAACTTAAATGCATCTAGAT 59.171 41.667 4.39 0.00 0.00 1.98
3925 4167 4.207165 GGGCCAACTTAAATGCATCTAGA 58.793 43.478 4.39 0.00 0.00 2.43
3926 4168 3.953612 TGGGCCAACTTAAATGCATCTAG 59.046 43.478 2.13 0.09 0.00 2.43
3927 4169 3.699038 GTGGGCCAACTTAAATGCATCTA 59.301 43.478 8.40 0.00 0.00 1.98
3928 4170 2.497273 GTGGGCCAACTTAAATGCATCT 59.503 45.455 8.40 0.00 0.00 2.90
3929 4171 2.735126 CGTGGGCCAACTTAAATGCATC 60.735 50.000 8.40 0.00 0.00 3.91
3930 4172 1.204467 CGTGGGCCAACTTAAATGCAT 59.796 47.619 8.40 0.00 0.00 3.96
3931 4173 0.600557 CGTGGGCCAACTTAAATGCA 59.399 50.000 8.40 0.00 0.00 3.96
3932 4174 0.108851 CCGTGGGCCAACTTAAATGC 60.109 55.000 8.40 0.00 0.00 3.56
3933 4175 0.108851 GCCGTGGGCCAACTTAAATG 60.109 55.000 8.40 0.00 44.06 2.32
3934 4176 2.272923 GCCGTGGGCCAACTTAAAT 58.727 52.632 8.40 0.00 44.06 1.40
3935 4177 3.766432 GCCGTGGGCCAACTTAAA 58.234 55.556 8.40 0.00 44.06 1.52
3950 4192 0.663153 GTTATCAGCCAACGGATGCC 59.337 55.000 0.00 0.00 39.19 4.40
3951 4193 0.304705 CGTTATCAGCCAACGGATGC 59.695 55.000 0.00 0.00 43.79 3.91
3956 4198 2.808958 CGCCCGTTATCAGCCAACG 61.809 63.158 0.84 0.84 46.33 4.10
3957 4199 1.702491 GACGCCCGTTATCAGCCAAC 61.702 60.000 0.00 0.00 0.00 3.77
3958 4200 1.448893 GACGCCCGTTATCAGCCAA 60.449 57.895 0.00 0.00 0.00 4.52
3959 4201 2.185867 GACGCCCGTTATCAGCCA 59.814 61.111 0.00 0.00 0.00 4.75
3960 4202 1.741327 TAGGACGCCCGTTATCAGCC 61.741 60.000 0.00 0.00 37.58 4.85
3961 4203 0.317479 ATAGGACGCCCGTTATCAGC 59.683 55.000 0.00 0.00 37.58 4.26
3962 4204 3.005050 TGTTATAGGACGCCCGTTATCAG 59.995 47.826 0.00 0.00 37.58 2.90
3963 4205 2.957680 TGTTATAGGACGCCCGTTATCA 59.042 45.455 0.00 0.00 37.58 2.15
3964 4206 3.648339 TGTTATAGGACGCCCGTTATC 57.352 47.619 0.00 0.00 37.58 1.75
3965 4207 3.322828 ACATGTTATAGGACGCCCGTTAT 59.677 43.478 0.00 0.00 37.58 1.89
3966 4208 2.694628 ACATGTTATAGGACGCCCGTTA 59.305 45.455 0.00 0.00 37.58 3.18
3967 4209 1.483415 ACATGTTATAGGACGCCCGTT 59.517 47.619 0.00 0.00 37.58 4.44
3968 4210 1.117150 ACATGTTATAGGACGCCCGT 58.883 50.000 0.00 0.00 37.58 5.28
3969 4211 2.132762 GAACATGTTATAGGACGCCCG 58.867 52.381 11.95 0.00 37.58 6.13
3970 4212 3.131396 CTGAACATGTTATAGGACGCCC 58.869 50.000 11.95 0.00 0.00 6.13
3971 4213 3.793559 ACTGAACATGTTATAGGACGCC 58.206 45.455 11.95 0.00 0.00 5.68
3972 4214 4.034048 CCAACTGAACATGTTATAGGACGC 59.966 45.833 11.95 0.00 0.00 5.19
3973 4215 5.175859 ACCAACTGAACATGTTATAGGACG 58.824 41.667 11.95 7.05 0.00 4.79
3974 4216 7.101054 TGTACCAACTGAACATGTTATAGGAC 58.899 38.462 11.95 5.17 0.00 3.85
3975 4217 7.179516 TCTGTACCAACTGAACATGTTATAGGA 59.820 37.037 11.95 1.25 31.37 2.94
3976 4218 7.327975 TCTGTACCAACTGAACATGTTATAGG 58.672 38.462 11.95 11.55 31.37 2.57
3977 4219 8.948631 ATCTGTACCAACTGAACATGTTATAG 57.051 34.615 11.95 14.90 37.16 1.31
3979 4221 8.758829 TCTATCTGTACCAACTGAACATGTTAT 58.241 33.333 11.95 0.00 37.16 1.89
3980 4222 8.129496 TCTATCTGTACCAACTGAACATGTTA 57.871 34.615 11.95 0.00 37.16 2.41
3981 4223 7.004555 TCTATCTGTACCAACTGAACATGTT 57.995 36.000 11.78 11.78 37.16 2.71
3982 4224 6.605471 TCTATCTGTACCAACTGAACATGT 57.395 37.500 0.00 0.00 37.16 3.21
3983 4225 6.018425 GCATCTATCTGTACCAACTGAACATG 60.018 42.308 0.00 0.00 37.16 3.21
3984 4226 6.051717 GCATCTATCTGTACCAACTGAACAT 58.948 40.000 0.00 0.00 37.16 2.71
3985 4227 5.046663 TGCATCTATCTGTACCAACTGAACA 60.047 40.000 0.00 0.00 37.16 3.18
3986 4228 5.419542 TGCATCTATCTGTACCAACTGAAC 58.580 41.667 0.00 0.00 37.16 3.18
3987 4229 5.675684 TGCATCTATCTGTACCAACTGAA 57.324 39.130 0.00 0.00 37.16 3.02
3988 4230 5.876651 ATGCATCTATCTGTACCAACTGA 57.123 39.130 0.00 0.00 37.88 3.41
3989 4231 5.631096 CGTATGCATCTATCTGTACCAACTG 59.369 44.000 0.19 0.00 0.00 3.16
3990 4232 5.279006 CCGTATGCATCTATCTGTACCAACT 60.279 44.000 0.19 0.00 0.00 3.16
3991 4233 4.923871 CCGTATGCATCTATCTGTACCAAC 59.076 45.833 0.19 0.00 0.00 3.77
3992 4234 4.587262 ACCGTATGCATCTATCTGTACCAA 59.413 41.667 0.19 0.00 0.00 3.67
3993 4235 4.149598 ACCGTATGCATCTATCTGTACCA 58.850 43.478 0.19 0.00 0.00 3.25
3994 4236 4.785511 ACCGTATGCATCTATCTGTACC 57.214 45.455 0.19 0.00 0.00 3.34
3995 4237 6.250344 TGTACCGTATGCATCTATCTGTAC 57.750 41.667 0.19 9.90 0.00 2.90
3996 4238 5.414765 CCTGTACCGTATGCATCTATCTGTA 59.585 44.000 0.19 0.00 0.00 2.74
3997 4239 4.218635 CCTGTACCGTATGCATCTATCTGT 59.781 45.833 0.19 0.00 0.00 3.41
3998 4240 4.218635 ACCTGTACCGTATGCATCTATCTG 59.781 45.833 0.19 0.00 0.00 2.90
3999 4241 4.408276 ACCTGTACCGTATGCATCTATCT 58.592 43.478 0.19 0.00 0.00 1.98
4000 4242 4.785511 ACCTGTACCGTATGCATCTATC 57.214 45.455 0.19 0.00 0.00 2.08
4001 4243 5.546621 AAACCTGTACCGTATGCATCTAT 57.453 39.130 0.19 0.00 0.00 1.98
4002 4244 5.113383 CAAAACCTGTACCGTATGCATCTA 58.887 41.667 0.19 0.00 0.00 1.98
4003 4245 3.906720 AAACCTGTACCGTATGCATCT 57.093 42.857 0.19 0.00 0.00 2.90
4004 4246 3.687698 ACAAAACCTGTACCGTATGCATC 59.312 43.478 0.19 0.00 36.10 3.91
4005 4247 3.681593 ACAAAACCTGTACCGTATGCAT 58.318 40.909 3.79 3.79 36.10 3.96
4006 4248 3.128852 ACAAAACCTGTACCGTATGCA 57.871 42.857 0.00 0.00 36.10 3.96
4015 4257 3.215975 GTTGCCCTGTACAAAACCTGTA 58.784 45.455 0.00 0.00 39.64 2.74
4016 4258 2.028876 GTTGCCCTGTACAAAACCTGT 58.971 47.619 0.00 0.00 42.47 4.00
4017 4259 1.001815 CGTTGCCCTGTACAAAACCTG 60.002 52.381 0.00 0.00 0.00 4.00
4018 4260 1.314730 CGTTGCCCTGTACAAAACCT 58.685 50.000 0.00 0.00 0.00 3.50
4019 4261 1.026584 ACGTTGCCCTGTACAAAACC 58.973 50.000 0.00 0.00 0.00 3.27
4020 4262 2.855660 AACGTTGCCCTGTACAAAAC 57.144 45.000 0.00 0.00 0.00 2.43
4021 4263 3.512680 CAAAACGTTGCCCTGTACAAAA 58.487 40.909 0.00 0.00 0.00 2.44
4022 4264 3.152261 CAAAACGTTGCCCTGTACAAA 57.848 42.857 0.00 0.00 0.00 2.83
4023 4265 2.853731 CAAAACGTTGCCCTGTACAA 57.146 45.000 0.00 0.00 0.00 2.41
4033 4275 3.360463 CGTTATGTCCATGCAAAACGTTG 59.640 43.478 0.00 0.00 36.04 4.10
4034 4276 3.251245 TCGTTATGTCCATGCAAAACGTT 59.749 39.130 0.00 0.00 40.26 3.99
4035 4277 2.809119 TCGTTATGTCCATGCAAAACGT 59.191 40.909 10.90 0.00 40.26 3.99
4036 4278 3.463533 TCGTTATGTCCATGCAAAACG 57.536 42.857 0.00 6.68 40.61 3.60
4037 4279 3.547468 GCATCGTTATGTCCATGCAAAAC 59.453 43.478 0.00 0.00 41.16 2.43
4038 4280 3.730362 CGCATCGTTATGTCCATGCAAAA 60.730 43.478 0.00 0.00 41.51 2.44
4039 4281 2.223226 CGCATCGTTATGTCCATGCAAA 60.223 45.455 0.00 0.00 41.51 3.68
4040 4282 1.330213 CGCATCGTTATGTCCATGCAA 59.670 47.619 0.00 0.00 41.51 4.08
4041 4283 0.936600 CGCATCGTTATGTCCATGCA 59.063 50.000 0.00 0.00 41.51 3.96
4042 4284 0.384725 GCGCATCGTTATGTCCATGC 60.385 55.000 0.30 0.00 38.64 4.06
4043 4285 0.936600 TGCGCATCGTTATGTCCATG 59.063 50.000 5.66 0.00 35.38 3.66
4044 4286 1.662517 TTGCGCATCGTTATGTCCAT 58.337 45.000 12.75 0.00 35.38 3.41
4045 4287 1.662517 ATTGCGCATCGTTATGTCCA 58.337 45.000 12.75 0.00 35.38 4.02
4046 4288 3.431912 TCATATTGCGCATCGTTATGTCC 59.568 43.478 12.75 0.00 35.38 4.02
4047 4289 4.386230 GTCATATTGCGCATCGTTATGTC 58.614 43.478 12.75 10.56 35.38 3.06
4048 4290 3.121025 CGTCATATTGCGCATCGTTATGT 60.121 43.478 12.75 0.00 35.38 2.29
4049 4291 3.398328 CGTCATATTGCGCATCGTTATG 58.602 45.455 12.75 15.92 36.09 1.90
4050 4292 2.411748 CCGTCATATTGCGCATCGTTAT 59.588 45.455 12.75 3.31 0.00 1.89
4051 4293 1.790043 CCGTCATATTGCGCATCGTTA 59.210 47.619 12.75 0.00 0.00 3.18
4052 4294 0.581529 CCGTCATATTGCGCATCGTT 59.418 50.000 12.75 0.00 0.00 3.85
4053 4295 0.249280 TCCGTCATATTGCGCATCGT 60.249 50.000 12.75 2.89 0.00 3.73
4054 4296 0.858583 TTCCGTCATATTGCGCATCG 59.141 50.000 12.75 9.55 0.00 3.84
4055 4297 2.639751 GTTTCCGTCATATTGCGCATC 58.360 47.619 12.75 0.00 0.00 3.91
4056 4298 1.003972 CGTTTCCGTCATATTGCGCAT 60.004 47.619 12.75 3.99 0.00 4.73
4057 4299 0.371989 CGTTTCCGTCATATTGCGCA 59.628 50.000 5.66 5.66 0.00 6.09
4058 4300 0.648441 TCGTTTCCGTCATATTGCGC 59.352 50.000 0.00 0.00 35.01 6.09
4059 4301 4.621460 AGATATCGTTTCCGTCATATTGCG 59.379 41.667 0.00 0.00 35.01 4.85
4060 4302 5.668866 GCAGATATCGTTTCCGTCATATTGC 60.669 44.000 0.00 0.00 35.01 3.56
4061 4303 5.405269 TGCAGATATCGTTTCCGTCATATTG 59.595 40.000 0.00 0.00 35.01 1.90
4062 4304 5.538118 TGCAGATATCGTTTCCGTCATATT 58.462 37.500 0.00 0.00 35.01 1.28
4063 4305 5.134202 TGCAGATATCGTTTCCGTCATAT 57.866 39.130 0.00 0.00 35.01 1.78
4064 4306 4.577834 TGCAGATATCGTTTCCGTCATA 57.422 40.909 0.00 0.00 35.01 2.15
4065 4307 3.452755 TGCAGATATCGTTTCCGTCAT 57.547 42.857 0.00 0.00 35.01 3.06
4066 4308 2.927477 GTTGCAGATATCGTTTCCGTCA 59.073 45.455 0.00 0.00 35.01 4.35
4067 4309 2.284417 GGTTGCAGATATCGTTTCCGTC 59.716 50.000 0.00 0.00 35.01 4.79
4068 4310 2.277084 GGTTGCAGATATCGTTTCCGT 58.723 47.619 0.00 0.00 35.01 4.69
4069 4311 1.597663 GGGTTGCAGATATCGTTTCCG 59.402 52.381 0.00 0.00 0.00 4.30
4070 4312 1.947456 GGGGTTGCAGATATCGTTTCC 59.053 52.381 0.00 0.00 0.00 3.13
4071 4313 2.614057 CTGGGGTTGCAGATATCGTTTC 59.386 50.000 0.00 0.00 0.00 2.78
4072 4314 2.643551 CTGGGGTTGCAGATATCGTTT 58.356 47.619 0.00 0.00 0.00 3.60
4073 4315 1.134098 CCTGGGGTTGCAGATATCGTT 60.134 52.381 0.00 0.00 0.00 3.85
4074 4316 0.469917 CCTGGGGTTGCAGATATCGT 59.530 55.000 0.00 0.00 0.00 3.73
4075 4317 0.758734 TCCTGGGGTTGCAGATATCG 59.241 55.000 0.00 0.00 0.00 2.92
4076 4318 2.050144 TCTCCTGGGGTTGCAGATATC 58.950 52.381 0.00 0.00 0.00 1.63
4077 4319 2.196742 TCTCCTGGGGTTGCAGATAT 57.803 50.000 0.00 0.00 0.00 1.63
4078 4320 1.839994 CTTCTCCTGGGGTTGCAGATA 59.160 52.381 0.00 0.00 0.00 1.98
4079 4321 0.622665 CTTCTCCTGGGGTTGCAGAT 59.377 55.000 0.00 0.00 0.00 2.90
4080 4322 2.069776 CTTCTCCTGGGGTTGCAGA 58.930 57.895 0.00 0.00 0.00 4.26
4081 4323 1.676967 GCTTCTCCTGGGGTTGCAG 60.677 63.158 8.26 0.00 0.00 4.41
4082 4324 2.436109 GCTTCTCCTGGGGTTGCA 59.564 61.111 8.26 0.00 0.00 4.08
4083 4325 1.973812 GTGCTTCTCCTGGGGTTGC 60.974 63.158 0.00 0.00 0.00 4.17
4084 4326 0.890996 GTGTGCTTCTCCTGGGGTTG 60.891 60.000 0.00 0.00 0.00 3.77
4085 4327 1.062488 AGTGTGCTTCTCCTGGGGTT 61.062 55.000 0.00 0.00 0.00 4.11
4086 4328 0.178903 TAGTGTGCTTCTCCTGGGGT 60.179 55.000 0.00 0.00 0.00 4.95
4087 4329 0.250513 GTAGTGTGCTTCTCCTGGGG 59.749 60.000 0.00 0.00 0.00 4.96
4088 4330 0.250513 GGTAGTGTGCTTCTCCTGGG 59.749 60.000 0.00 0.00 0.00 4.45
4089 4331 0.108615 CGGTAGTGTGCTTCTCCTGG 60.109 60.000 0.00 0.00 0.00 4.45
4090 4332 0.737715 GCGGTAGTGTGCTTCTCCTG 60.738 60.000 0.00 0.00 0.00 3.86
4091 4333 0.900647 AGCGGTAGTGTGCTTCTCCT 60.901 55.000 0.00 0.00 38.57 3.69
4092 4334 0.458716 GAGCGGTAGTGTGCTTCTCC 60.459 60.000 0.00 0.00 42.60 3.71
4093 4335 0.458716 GGAGCGGTAGTGTGCTTCTC 60.459 60.000 0.00 0.00 42.60 2.87
4094 4336 1.592223 GGAGCGGTAGTGTGCTTCT 59.408 57.895 0.00 0.00 42.60 2.85
4095 4337 1.805945 CGGAGCGGTAGTGTGCTTC 60.806 63.158 0.00 0.00 42.60 3.86
4096 4338 1.812686 TTCGGAGCGGTAGTGTGCTT 61.813 55.000 0.00 0.00 42.60 3.91
4097 4339 1.812686 TTTCGGAGCGGTAGTGTGCT 61.813 55.000 0.00 0.00 45.90 4.40
4098 4340 1.352156 CTTTCGGAGCGGTAGTGTGC 61.352 60.000 0.00 0.00 0.00 4.57
4099 4341 1.352156 GCTTTCGGAGCGGTAGTGTG 61.352 60.000 0.00 0.00 42.46 3.82
4100 4342 1.080025 GCTTTCGGAGCGGTAGTGT 60.080 57.895 0.00 0.00 42.46 3.55
4101 4343 3.782042 GCTTTCGGAGCGGTAGTG 58.218 61.111 0.00 0.00 42.46 2.74
4109 4351 1.603802 TGCTTGTTCAAGCTTTCGGAG 59.396 47.619 29.16 0.00 45.66 4.63
4110 4352 1.674359 TGCTTGTTCAAGCTTTCGGA 58.326 45.000 29.16 12.24 45.66 4.55
4111 4353 2.388121 CTTGCTTGTTCAAGCTTTCGG 58.612 47.619 29.16 15.42 45.66 4.30
4118 4360 3.441496 TTCTTGGCTTGCTTGTTCAAG 57.559 42.857 8.04 8.04 44.63 3.02
4119 4361 3.883830 TTTCTTGGCTTGCTTGTTCAA 57.116 38.095 0.00 0.00 0.00 2.69
4120 4362 3.883830 TTTTCTTGGCTTGCTTGTTCA 57.116 38.095 0.00 0.00 0.00 3.18
4121 4363 4.370917 TGATTTTCTTGGCTTGCTTGTTC 58.629 39.130 0.00 0.00 0.00 3.18
4122 4364 4.405116 TGATTTTCTTGGCTTGCTTGTT 57.595 36.364 0.00 0.00 0.00 2.83
4123 4365 4.122046 GTTGATTTTCTTGGCTTGCTTGT 58.878 39.130 0.00 0.00 0.00 3.16
4124 4366 3.495753 GGTTGATTTTCTTGGCTTGCTTG 59.504 43.478 0.00 0.00 0.00 4.01
4125 4367 3.732212 GGTTGATTTTCTTGGCTTGCTT 58.268 40.909 0.00 0.00 0.00 3.91
4126 4368 2.288395 CGGTTGATTTTCTTGGCTTGCT 60.288 45.455 0.00 0.00 0.00 3.91
4127 4369 2.061028 CGGTTGATTTTCTTGGCTTGC 58.939 47.619 0.00 0.00 0.00 4.01
4128 4370 2.610232 CCCGGTTGATTTTCTTGGCTTG 60.610 50.000 0.00 0.00 0.00 4.01
4129 4371 1.618343 CCCGGTTGATTTTCTTGGCTT 59.382 47.619 0.00 0.00 0.00 4.35
4130 4372 1.256812 CCCGGTTGATTTTCTTGGCT 58.743 50.000 0.00 0.00 0.00 4.75
4131 4373 0.246360 CCCCGGTTGATTTTCTTGGC 59.754 55.000 0.00 0.00 0.00 4.52
4132 4374 1.544246 GTCCCCGGTTGATTTTCTTGG 59.456 52.381 0.00 0.00 0.00 3.61
4133 4375 1.544246 GGTCCCCGGTTGATTTTCTTG 59.456 52.381 0.00 0.00 0.00 3.02
4134 4376 1.884928 CGGTCCCCGGTTGATTTTCTT 60.885 52.381 0.00 0.00 44.15 2.52
4135 4377 0.322187 CGGTCCCCGGTTGATTTTCT 60.322 55.000 0.00 0.00 44.15 2.52
4136 4378 2.177044 CGGTCCCCGGTTGATTTTC 58.823 57.895 0.00 0.00 44.15 2.29
4137 4379 4.408378 CGGTCCCCGGTTGATTTT 57.592 55.556 0.00 0.00 44.15 1.82
4147 4389 0.671796 CAGTTGGTTTTTCGGTCCCC 59.328 55.000 0.00 0.00 0.00 4.81
4148 4390 0.671796 CCAGTTGGTTTTTCGGTCCC 59.328 55.000 0.00 0.00 0.00 4.46
4149 4391 0.031585 GCCAGTTGGTTTTTCGGTCC 59.968 55.000 0.00 0.00 37.57 4.46
4150 4392 1.029681 AGCCAGTTGGTTTTTCGGTC 58.970 50.000 0.00 0.00 37.57 4.79
4151 4393 1.136110 CAAGCCAGTTGGTTTTTCGGT 59.864 47.619 0.00 0.00 36.44 4.69
4152 4394 1.136110 ACAAGCCAGTTGGTTTTTCGG 59.864 47.619 0.00 0.00 40.90 4.30
4153 4395 2.577449 ACAAGCCAGTTGGTTTTTCG 57.423 45.000 0.00 0.00 40.90 3.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.