Multiple sequence alignment - TraesCS5D01G040200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G040200 chr5D 100.000 8145 0 0 1 8145 41143803 41135659 0.000000e+00 15042.0
1 TraesCS5D01G040200 chr5D 87.847 288 24 3 7831 8110 41246236 41245952 2.190000e-85 327.0
2 TraesCS5D01G040200 chr5B 96.891 4085 92 13 1 4059 35258484 35254409 0.000000e+00 6807.0
3 TraesCS5D01G040200 chr5B 95.971 3227 62 13 4051 7242 35252718 35249525 0.000000e+00 5177.0
4 TraesCS5D01G040200 chr5B 84.841 409 18 13 7211 7596 35193055 35192668 9.980000e-99 372.0
5 TraesCS5D01G040200 chr5B 96.685 181 5 1 7636 7815 362817746 362817926 4.780000e-77 300.0
6 TraesCS5D01G040200 chr5B 98.507 67 1 0 3769 3835 35254633 35254699 1.440000e-22 119.0
7 TraesCS5D01G040200 chr3B 89.471 1966 194 10 5199 7155 815034740 815032779 0.000000e+00 2471.0
8 TraesCS5D01G040200 chr3B 89.404 1963 181 21 5200 7150 814149674 814147727 0.000000e+00 2447.0
9 TraesCS5D01G040200 chr3B 88.804 1965 194 19 5200 7148 814651817 814649863 0.000000e+00 2386.0
10 TraesCS5D01G040200 chr3B 88.720 1968 197 16 5199 7149 814807871 814805912 0.000000e+00 2381.0
11 TraesCS5D01G040200 chr3B 88.524 1978 194 25 5187 7151 814502573 814500616 0.000000e+00 2364.0
12 TraesCS5D01G040200 chr3B 87.703 1968 218 16 5200 7149 814613627 814611666 0.000000e+00 2272.0
13 TraesCS5D01G040200 chr3B 87.866 1945 211 19 5224 7151 814527230 814525294 0.000000e+00 2261.0
14 TraesCS5D01G040200 chr3B 87.475 1964 230 8 5201 7151 814887864 814885904 0.000000e+00 2250.0
15 TraesCS5D01G040200 chr3B 90.571 1453 94 15 3342 4779 814504485 814503061 0.000000e+00 1884.0
16 TraesCS5D01G040200 chr3B 87.765 1226 133 9 530 1754 814659281 814658072 0.000000e+00 1417.0
17 TraesCS5D01G040200 chr3B 92.246 993 77 0 5200 6192 814566473 814565481 0.000000e+00 1408.0
18 TraesCS5D01G040200 chr3B 87.315 1214 139 12 640 1851 815043521 815042321 0.000000e+00 1375.0
19 TraesCS5D01G040200 chr3B 88.828 1101 114 6 640 1738 814803016 814801923 0.000000e+00 1343.0
20 TraesCS5D01G040200 chr3B 85.135 1332 171 20 526 1851 814896002 814894692 0.000000e+00 1338.0
21 TraesCS5D01G040200 chr3B 85.952 1203 160 7 659 1859 814157218 814156023 0.000000e+00 1277.0
22 TraesCS5D01G040200 chr3B 85.966 1190 155 10 663 1851 814575191 814574013 0.000000e+00 1262.0
23 TraesCS5D01G040200 chr3B 85.009 1114 134 19 6063 7152 814795688 814794584 0.000000e+00 1101.0
24 TraesCS5D01G040200 chr3B 90.647 695 59 4 2973 3667 814844784 814844096 0.000000e+00 918.0
25 TraesCS5D01G040200 chr3B 89.055 667 71 2 2903 3568 814573268 814572603 0.000000e+00 826.0
26 TraesCS5D01G040200 chr3B 87.722 676 77 4 2903 3578 814745718 814745049 0.000000e+00 784.0
27 TraesCS5D01G040200 chr3B 86.083 697 76 8 2903 3578 815037651 815036955 0.000000e+00 730.0
28 TraesCS5D01G040200 chr3B 86.587 671 76 7 2909 3578 814893620 814892963 0.000000e+00 728.0
29 TraesCS5D01G040200 chr3B 85.059 676 89 6 2903 3578 814801331 814800668 0.000000e+00 678.0
30 TraesCS5D01G040200 chr3B 93.447 412 26 1 4775 5185 814503037 814502626 1.940000e-170 610.0
31 TraesCS5D01G040200 chr3B 95.676 185 6 2 7632 7815 13524562 13524745 6.180000e-76 296.0
32 TraesCS5D01G040200 chr3B 96.154 182 4 3 7636 7815 742448505 742448325 2.220000e-75 294.0
33 TraesCS5D01G040200 chr3B 86.897 145 17 2 3834 3976 814572425 814572281 2.350000e-35 161.0
34 TraesCS5D01G040200 chr3B 91.579 95 8 0 3877 3971 815036789 815036695 1.840000e-26 132.0
35 TraesCS5D01G040200 chr3B 95.122 82 4 0 7498 7579 815044599 815044518 6.630000e-26 130.0
36 TraesCS5D01G040200 chr3B 82.877 146 20 3 4032 4173 814152931 814152787 8.580000e-25 126.0
37 TraesCS5D01G040200 chr3B 79.000 200 19 15 5 195 814157848 814157663 1.860000e-21 115.0
38 TraesCS5D01G040200 chr3B 86.111 108 13 2 4629 4735 814843479 814843373 1.860000e-21 115.0
39 TraesCS5D01G040200 chr3B 90.588 85 2 2 204 288 814608774 814608696 3.110000e-19 108.0
40 TraesCS5D01G040200 chr3B 80.435 138 21 5 4025 4159 814744689 814744555 5.200000e-17 100.0
41 TraesCS5D01G040200 chr3B 78.107 169 29 4 3834 3996 814892752 814892586 5.200000e-17 100.0
42 TraesCS5D01G040200 chr3B 86.517 89 4 5 3691 3771 814844099 814844011 3.130000e-14 91.6
43 TraesCS5D01G040200 chr3D 88.292 1973 201 23 5200 7151 605332869 605330906 0.000000e+00 2337.0
44 TraesCS5D01G040200 chr3D 91.503 459 39 0 2903 3361 606481271 606480813 4.150000e-177 632.0
45 TraesCS5D01G040200 chr3D 77.458 1007 143 42 4032 4985 605334814 605333839 7.240000e-145 525.0
46 TraesCS5D01G040200 chr3D 85.417 96 11 3 3768 3862 6158243 6158150 6.730000e-16 97.1
47 TraesCS5D01G040200 chrUn 86.957 1955 221 24 5208 7149 46240618 46242551 0.000000e+00 2167.0
48 TraesCS5D01G040200 chrUn 86.432 1334 147 20 526 1847 46233023 46234334 0.000000e+00 1430.0
49 TraesCS5D01G040200 chrUn 87.111 675 73 5 2903 3576 46236593 46237254 0.000000e+00 752.0
50 TraesCS5D01G040200 chrUn 82.398 392 53 13 2194 2577 46234286 46234669 2.190000e-85 327.0
51 TraesCS5D01G040200 chrUn 84.956 113 15 2 4775 4885 46238504 46238616 6.680000e-21 113.0
52 TraesCS5D01G040200 chrUn 92.857 56 4 0 3656 3711 46237329 46237384 1.880000e-11 82.4
53 TraesCS5D01G040200 chr3A 87.172 1411 164 10 659 2066 737382021 737380625 0.000000e+00 1587.0
54 TraesCS5D01G040200 chr3A 90.244 1066 78 15 2730 3771 737379900 737378837 0.000000e+00 1369.0
55 TraesCS5D01G040200 chr3A 81.363 719 98 16 4495 5185 737378390 737377680 3.320000e-153 553.0
56 TraesCS5D01G040200 chr3A 88.112 429 33 10 2290 2711 737380553 737380136 2.040000e-135 494.0
57 TraesCS5D01G040200 chr3A 95.699 186 6 2 7631 7815 14054138 14054322 1.720000e-76 298.0
58 TraesCS5D01G040200 chr3A 93.578 109 4 2 3840 3945 737378833 737378725 8.460000e-35 159.0
59 TraesCS5D01G040200 chr3A 74.550 389 39 42 5 356 737382647 737382282 1.860000e-21 115.0
60 TraesCS5D01G040200 chr3A 84.615 104 8 6 2067 2169 737380652 737380556 6.730000e-16 97.1
61 TraesCS5D01G040200 chr3A 95.455 44 2 0 2111 2154 737380329 737380286 4.080000e-08 71.3
62 TraesCS5D01G040200 chr4A 98.333 180 3 0 7636 7815 612089478 612089657 4.740000e-82 316.0
63 TraesCS5D01G040200 chr5A 97.790 181 3 1 7636 7815 237478214 237478034 2.210000e-80 311.0
64 TraesCS5D01G040200 chr5A 94.667 75 2 2 3769 3842 422040358 422040431 1.860000e-21 115.0
65 TraesCS5D01G040200 chr7A 96.685 181 6 0 7635 7815 629774183 629774003 1.330000e-77 302.0
66 TraesCS5D01G040200 chr7A 96.154 182 6 1 7635 7815 726412325 726412506 6.180000e-76 296.0
67 TraesCS5D01G040200 chr7B 96.175 183 6 1 7634 7815 696256973 696256791 1.720000e-76 298.0
68 TraesCS5D01G040200 chr6A 93.506 77 2 2 3768 3843 614534043 614533969 2.400000e-20 111.0
69 TraesCS5D01G040200 chr6D 93.421 76 1 3 3772 3846 25612796 25612724 8.640000e-20 110.0
70 TraesCS5D01G040200 chr6B 93.333 75 3 1 3764 3836 113298872 113298946 8.640000e-20 110.0
71 TraesCS5D01G040200 chr2D 89.011 91 6 1 3754 3840 327614812 327614902 8.640000e-20 110.0
72 TraesCS5D01G040200 chr1A 93.243 74 1 1 3765 3838 399497072 399497141 1.120000e-18 106.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G040200 chr5D 41135659 41143803 8144 True 15042.000000 15042 100.000000 1 8145 1 chr5D.!!$R1 8144
1 TraesCS5D01G040200 chr5B 35249525 35258484 8959 True 5992.000000 6807 96.431000 1 7242 2 chr5B.!!$R2 7241
2 TraesCS5D01G040200 chr3B 814649863 814651817 1954 True 2386.000000 2386 88.804000 5200 7148 1 chr3B.!!$R4 1948
3 TraesCS5D01G040200 chr3B 814525294 814527230 1936 True 2261.000000 2261 87.866000 5224 7151 1 chr3B.!!$R2 1927
4 TraesCS5D01G040200 chr3B 814885904 814887864 1960 True 2250.000000 2250 87.475000 5201 7151 1 chr3B.!!$R7 1950
5 TraesCS5D01G040200 chr3B 814500616 814504485 3869 True 1619.333333 2364 90.847333 3342 7151 3 chr3B.!!$R9 3809
6 TraesCS5D01G040200 chr3B 814800668 814807871 7203 True 1467.333333 2381 87.535667 640 7149 3 chr3B.!!$R13 6509
7 TraesCS5D01G040200 chr3B 814658072 814659281 1209 True 1417.000000 1417 87.765000 530 1754 1 chr3B.!!$R5 1224
8 TraesCS5D01G040200 chr3B 814565481 814566473 992 True 1408.000000 1408 92.246000 5200 6192 1 chr3B.!!$R3 992
9 TraesCS5D01G040200 chr3B 814608696 814613627 4931 True 1190.000000 2272 89.145500 204 7149 2 chr3B.!!$R11 6945
10 TraesCS5D01G040200 chr3B 815032779 815037651 4872 True 1111.000000 2471 89.044333 2903 7155 3 chr3B.!!$R16 4252
11 TraesCS5D01G040200 chr3B 814794584 814795688 1104 True 1101.000000 1101 85.009000 6063 7152 1 chr3B.!!$R6 1089
12 TraesCS5D01G040200 chr3B 814147727 814157848 10121 True 991.250000 2447 84.308250 5 7150 4 chr3B.!!$R8 7145
13 TraesCS5D01G040200 chr3B 815042321 815044599 2278 True 752.500000 1375 91.218500 640 7579 2 chr3B.!!$R17 6939
14 TraesCS5D01G040200 chr3B 814572281 814575191 2910 True 749.666667 1262 87.306000 663 3976 3 chr3B.!!$R10 3313
15 TraesCS5D01G040200 chr3B 814892586 814896002 3416 True 722.000000 1338 83.276333 526 3996 3 chr3B.!!$R15 3470
16 TraesCS5D01G040200 chr3B 814744555 814745718 1163 True 442.000000 784 84.078500 2903 4159 2 chr3B.!!$R12 1256
17 TraesCS5D01G040200 chr3B 814843373 814844784 1411 True 374.866667 918 87.758333 2973 4735 3 chr3B.!!$R14 1762
18 TraesCS5D01G040200 chr3D 605330906 605334814 3908 True 1431.000000 2337 82.875000 4032 7151 2 chr3D.!!$R3 3119
19 TraesCS5D01G040200 chrUn 46233023 46242551 9528 False 811.900000 2167 86.785167 526 7149 6 chrUn.!!$F1 6623
20 TraesCS5D01G040200 chr3A 737377680 737382647 4967 True 555.675000 1587 86.886125 5 5185 8 chr3A.!!$R1 5180

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
92 94 0.690762 TTGTTCTTTCCCCCTCCTCG 59.309 55.000 0.00 0.00 0.00 4.63 F
1138 1603 0.664767 GACGATGTCTGCCGCCTATC 60.665 60.000 0.00 0.00 0.00 2.08 F
2593 3507 2.488545 ACTAGCGTTCACTGGTCAGTAG 59.511 50.000 3.06 0.00 40.20 2.57 F
3034 6673 0.388520 CACTCGCACGGAGACAATGA 60.389 55.000 0.00 0.00 46.23 2.57 F
3479 7175 1.303799 ATCGCCAAGCAGTGCTCAAG 61.304 55.000 20.03 11.22 38.25 3.02 F
4688 10899 4.153117 CGGGCAATACATCTGATTAGAAGC 59.847 45.833 0.00 0.00 36.32 3.86 F
4763 10982 2.768698 TCCAAAACATTGGCATGCTTG 58.231 42.857 18.92 14.92 41.81 4.01 F
6464 15090 0.032130 CACACTGCGTACTGTGGACT 59.968 55.000 12.71 0.00 46.73 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1772 2239 2.917933 TGGTTGAGACAGTGAACCAAG 58.082 47.619 10.82 0.00 44.84 3.61 R
2663 3584 1.627864 ATGTCGGAACTTTTTGGGGG 58.372 50.000 0.00 0.00 0.00 5.40 R
3936 7734 6.498304 ACTTCACTTTGACAGCTACAAAATG 58.502 36.000 15.81 15.81 36.33 2.32 R
4657 10728 4.056050 CAGATGTATTGCCCGGTTACTAC 58.944 47.826 0.00 0.00 0.00 2.73 R
4763 10982 5.621197 TTCGTTTATACATATGCATGCCC 57.379 39.130 16.68 0.00 35.39 5.36 R
6464 15090 0.768221 ACAGCCTTCCCCACTGAGAA 60.768 55.000 0.00 0.00 35.38 2.87 R
6665 15294 1.959282 CTTGAGGCTCTGCAGGTTTTT 59.041 47.619 15.13 0.00 0.00 1.94 R
7983 21839 0.037160 TGGGAAGGCGTAGGGTTTTC 59.963 55.000 0.00 0.00 0.00 2.29 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
92 94 0.690762 TTGTTCTTTCCCCCTCCTCG 59.309 55.000 0.00 0.00 0.00 4.63
132 138 2.994671 GCCGCCAAGAAGGAAAGGC 61.995 63.158 0.00 0.00 43.29 4.35
211 250 3.121030 CCACAGCGGCCTTCTTCG 61.121 66.667 0.00 0.00 0.00 3.79
505 588 2.811317 CTCACGAAGCTGCCGTCC 60.811 66.667 10.93 0.00 38.29 4.79
519 602 1.891919 CGTCCACAACACCACCAGG 60.892 63.158 0.00 0.00 42.21 4.45
602 691 5.935789 CCATTGATTGCTCCAACTGATTTTT 59.064 36.000 0.00 0.00 0.00 1.94
932 1397 1.837439 TCCTGGATATTGCTGTCCGTT 59.163 47.619 0.00 0.00 35.49 4.44
963 1428 2.158385 AGTCTTGGTGGTGTCTCTCTCT 60.158 50.000 0.00 0.00 0.00 3.10
964 1429 2.230266 GTCTTGGTGGTGTCTCTCTCTC 59.770 54.545 0.00 0.00 0.00 3.20
978 1443 1.216444 CTCTCGCAAGGTGCTAGCA 59.784 57.895 14.93 14.93 42.25 3.49
1138 1603 0.664767 GACGATGTCTGCCGCCTATC 60.665 60.000 0.00 0.00 0.00 2.08
1518 1983 9.965902 AGATATTTGAATGACAAGAGTTACCTT 57.034 29.630 0.00 0.00 39.77 3.50
1831 2302 4.442706 ACTAGACTTGGACTTGTGTTGTG 58.557 43.478 0.00 0.00 0.00 3.33
2091 2563 7.095397 TGTGGTTACAACTTCATACTCGATTTG 60.095 37.037 0.00 0.00 32.88 2.32
2154 2627 7.725397 TGCATGGAGTTATTTGGCTTCTTATAT 59.275 33.333 0.00 0.00 0.00 0.86
2593 3507 2.488545 ACTAGCGTTCACTGGTCAGTAG 59.511 50.000 3.06 0.00 40.20 2.57
2653 3574 3.872771 ACACCAAATGAAAGCAAGCAAAG 59.127 39.130 0.00 0.00 0.00 2.77
2663 3584 6.208644 TGAAAGCAAGCAAAGTATGAAGTTC 58.791 36.000 0.00 0.00 0.00 3.01
2962 6601 4.439289 GGAATTCAGCAGAAAAAGGATCCG 60.439 45.833 5.98 0.00 37.29 4.18
3034 6673 0.388520 CACTCGCACGGAGACAATGA 60.389 55.000 0.00 0.00 46.23 2.57
3305 6968 8.975663 ATGCAATTCAGAGATAAGAATGAAGA 57.024 30.769 0.00 0.00 34.86 2.87
3479 7175 1.303799 ATCGCCAAGCAGTGCTCAAG 61.304 55.000 20.03 11.22 38.25 3.02
3795 7586 8.425703 ACTCCCTCTGTAAAGAAATATAAGAGC 58.574 37.037 0.00 0.00 0.00 4.09
3798 7589 7.711339 CCCTCTGTAAAGAAATATAAGAGCGTT 59.289 37.037 0.00 0.00 0.00 4.84
3799 7590 9.099454 CCTCTGTAAAGAAATATAAGAGCGTTT 57.901 33.333 0.00 0.00 0.00 3.60
3936 7734 5.414789 AGGCCCAACCAAATTATTTGTAC 57.585 39.130 15.40 0.00 43.14 2.90
4054 9630 6.486657 CCTTTTCTTGTGGATACTGTCTCAAA 59.513 38.462 0.00 0.00 37.61 2.69
4620 10691 9.456459 TGATGGGACAGAATATCATATGGATAT 57.544 33.333 2.13 2.86 46.64 1.63
4688 10899 4.153117 CGGGCAATACATCTGATTAGAAGC 59.847 45.833 0.00 0.00 36.32 3.86
4763 10982 2.768698 TCCAAAACATTGGCATGCTTG 58.231 42.857 18.92 14.92 41.81 4.01
6040 14648 9.771534 AAGCTTGTACATCTTAGATATCTTTCC 57.228 33.333 11.25 0.00 0.00 3.13
6464 15090 0.032130 CACACTGCGTACTGTGGACT 59.968 55.000 12.71 0.00 46.73 3.85
6665 15294 2.224159 GGCCTGTCCTCACCTCCAA 61.224 63.158 0.00 0.00 0.00 3.53
6737 15366 1.758862 GGATCCAGGGGCTGAAAAATG 59.241 52.381 6.95 0.00 32.44 2.32
6926 15561 2.646930 TGCAGTTGGATTGCATAGGAG 58.353 47.619 0.00 0.00 45.89 3.69
7002 15643 5.971763 ACAGTATTCTAAACTGAGGAGCAG 58.028 41.667 10.02 0.00 45.89 4.24
7030 15671 1.828595 GTTGGGTTGTTCTGTGGGTTT 59.171 47.619 0.00 0.00 0.00 3.27
7072 15716 7.577303 TCAAGGAATTTATGCTGAATAGGAGT 58.423 34.615 0.00 0.00 0.00 3.85
7179 15824 1.463444 CCCTACGTCCGAAAAAGCTTG 59.537 52.381 0.00 0.00 0.00 4.01
7195 15840 1.271597 GCTTGTCCTTCAGATGGGTGT 60.272 52.381 2.51 0.00 0.00 4.16
7229 17376 0.183252 GGACGGAGGGAGTAGCTAGT 59.817 60.000 0.00 0.00 0.00 2.57
7231 17378 1.677052 GACGGAGGGAGTAGCTAGTTG 59.323 57.143 1.78 0.00 0.00 3.16
7242 17389 6.114767 GGAGTAGCTAGTTGTACTCTACTGT 58.885 44.000 19.74 0.00 43.22 3.55
7243 17390 6.258507 GGAGTAGCTAGTTGTACTCTACTGTC 59.741 46.154 19.74 5.96 43.22 3.51
7244 17391 6.949715 AGTAGCTAGTTGTACTCTACTGTCT 58.050 40.000 0.00 0.85 35.69 3.41
7247 17845 7.527568 AGCTAGTTGTACTCTACTGTCTTTT 57.472 36.000 0.00 0.00 32.55 2.27
7277 17875 9.249457 ACTGTATCTTGACATTCATGTATTACG 57.751 33.333 0.00 0.00 41.95 3.18
7279 17877 9.244799 TGTATCTTGACATTCATGTATTACGTC 57.755 33.333 0.00 0.00 41.95 4.34
7280 17878 7.715265 ATCTTGACATTCATGTATTACGTCC 57.285 36.000 0.00 0.00 41.95 4.79
7286 17884 5.598830 ACATTCATGTATTACGTCCCTCTCT 59.401 40.000 0.00 0.00 39.68 3.10
7289 17887 4.954202 TCATGTATTACGTCCCTCTCTTGT 59.046 41.667 0.00 0.00 0.00 3.16
7290 17888 6.124340 TCATGTATTACGTCCCTCTCTTGTA 58.876 40.000 0.00 0.00 0.00 2.41
7291 17889 6.262496 TCATGTATTACGTCCCTCTCTTGTAG 59.738 42.308 0.00 0.00 0.00 2.74
7293 17891 6.653020 TGTATTACGTCCCTCTCTTGTAGTA 58.347 40.000 0.00 0.00 0.00 1.82
7295 17893 7.776969 TGTATTACGTCCCTCTCTTGTAGTATT 59.223 37.037 0.00 0.00 0.00 1.89
7296 17894 7.657023 ATTACGTCCCTCTCTTGTAGTATTT 57.343 36.000 0.00 0.00 0.00 1.40
7297 17895 5.579564 ACGTCCCTCTCTTGTAGTATTTC 57.420 43.478 0.00 0.00 0.00 2.17
7299 17897 4.645588 CGTCCCTCTCTTGTAGTATTTCCT 59.354 45.833 0.00 0.00 0.00 3.36
7300 17898 5.127356 CGTCCCTCTCTTGTAGTATTTCCTT 59.873 44.000 0.00 0.00 0.00 3.36
7301 17899 6.351117 CGTCCCTCTCTTGTAGTATTTCCTTT 60.351 42.308 0.00 0.00 0.00 3.11
7302 17900 7.395617 GTCCCTCTCTTGTAGTATTTCCTTTT 58.604 38.462 0.00 0.00 0.00 2.27
7303 17901 7.334671 GTCCCTCTCTTGTAGTATTTCCTTTTG 59.665 40.741 0.00 0.00 0.00 2.44
7305 17903 8.319146 CCCTCTCTTGTAGTATTTCCTTTTGTA 58.681 37.037 0.00 0.00 0.00 2.41
7306 17904 9.152595 CCTCTCTTGTAGTATTTCCTTTTGTAC 57.847 37.037 0.00 0.00 0.00 2.90
7307 17905 9.152595 CTCTCTTGTAGTATTTCCTTTTGTACC 57.847 37.037 0.00 0.00 0.00 3.34
7308 17906 8.877195 TCTCTTGTAGTATTTCCTTTTGTACCT 58.123 33.333 0.00 0.00 0.00 3.08
7309 17907 9.503399 CTCTTGTAGTATTTCCTTTTGTACCTT 57.497 33.333 0.00 0.00 0.00 3.50
7339 17937 9.210228 ACAATATATATACCCCCTAGCTACAAC 57.790 37.037 0.00 0.00 0.00 3.32
7341 17939 1.713297 ATACCCCCTAGCTACAACGG 58.287 55.000 0.00 0.00 0.00 4.44
7342 17940 1.044790 TACCCCCTAGCTACAACGGC 61.045 60.000 0.00 0.00 0.00 5.68
7345 17943 1.327690 CCCCTAGCTACAACGGCTGA 61.328 60.000 0.00 0.00 40.52 4.26
7346 17944 0.753262 CCCTAGCTACAACGGCTGAT 59.247 55.000 0.00 0.00 40.52 2.90
7349 17947 3.270877 CCTAGCTACAACGGCTGATTTT 58.729 45.455 0.00 0.00 40.52 1.82
7350 17948 4.439057 CCTAGCTACAACGGCTGATTTTA 58.561 43.478 0.00 0.00 40.52 1.52
7351 17949 5.057149 CCTAGCTACAACGGCTGATTTTAT 58.943 41.667 0.00 0.00 40.52 1.40
7357 18528 7.282224 AGCTACAACGGCTGATTTTATATGAAA 59.718 33.333 0.00 0.00 38.73 2.69
7372 18543 9.734620 TTTTATATGAAAAAGAGGCATTCATCG 57.265 29.630 3.72 0.00 41.52 3.84
7374 18545 5.649782 ATGAAAAAGAGGCATTCATCGTT 57.350 34.783 0.00 0.00 39.00 3.85
7375 18546 5.452078 TGAAAAAGAGGCATTCATCGTTT 57.548 34.783 0.00 0.00 0.00 3.60
7376 18547 5.841810 TGAAAAAGAGGCATTCATCGTTTT 58.158 33.333 3.75 3.75 38.98 2.43
7377 18548 6.279882 TGAAAAAGAGGCATTCATCGTTTTT 58.720 32.000 5.37 3.45 37.28 1.94
7416 18587 9.846248 AACTTTGATTTATACAGCACAATTCTC 57.154 29.630 0.00 0.00 0.00 2.87
7417 18588 8.462016 ACTTTGATTTATACAGCACAATTCTCC 58.538 33.333 0.00 0.00 0.00 3.71
7418 18589 8.579850 TTTGATTTATACAGCACAATTCTCCT 57.420 30.769 0.00 0.00 0.00 3.69
7419 18590 7.792374 TGATTTATACAGCACAATTCTCCTC 57.208 36.000 0.00 0.00 0.00 3.71
7420 18591 7.568349 TGATTTATACAGCACAATTCTCCTCT 58.432 34.615 0.00 0.00 0.00 3.69
7421 18592 8.049117 TGATTTATACAGCACAATTCTCCTCTT 58.951 33.333 0.00 0.00 0.00 2.85
7422 18593 8.814038 ATTTATACAGCACAATTCTCCTCTTT 57.186 30.769 0.00 0.00 0.00 2.52
7423 18594 8.635765 TTTATACAGCACAATTCTCCTCTTTT 57.364 30.769 0.00 0.00 0.00 2.27
7424 18595 8.635765 TTATACAGCACAATTCTCCTCTTTTT 57.364 30.769 0.00 0.00 0.00 1.94
7517 19156 6.169800 GCACATTTTACATTACAACCCCAAT 58.830 36.000 0.00 0.00 0.00 3.16
7539 19178 1.607467 GACCCAAGCCCATTGTGCT 60.607 57.895 0.00 0.00 41.89 4.40
7546 19185 0.260816 AGCCCATTGTGCTGATGGAT 59.739 50.000 13.05 1.95 45.59 3.41
7547 19186 0.672342 GCCCATTGTGCTGATGGATC 59.328 55.000 13.05 0.00 45.59 3.36
7548 19187 2.025344 GCCCATTGTGCTGATGGATCA 61.025 52.381 13.05 0.00 45.59 2.92
7549 19188 2.594131 CCCATTGTGCTGATGGATCAT 58.406 47.619 13.05 0.00 45.59 2.45
7550 19189 2.296190 CCCATTGTGCTGATGGATCATG 59.704 50.000 13.05 0.00 45.59 3.07
7551 19190 2.296190 CCATTGTGCTGATGGATCATGG 59.704 50.000 7.52 0.00 45.59 3.66
7556 19195 1.069668 TGCTGATGGATCATGGACTCG 59.930 52.381 0.00 0.00 36.02 4.18
7571 19210 6.208797 TCATGGACTCGTCTTCTCTTTCTTTA 59.791 38.462 0.00 0.00 0.00 1.85
7587 19226 1.209504 CTTTATCTGGAGCCCAACGGA 59.790 52.381 0.00 0.00 30.80 4.69
7588 19227 1.507140 TTATCTGGAGCCCAACGGAT 58.493 50.000 0.00 0.00 36.68 4.18
7602 19241 1.065273 CGGATCCCGGAACAGTACG 59.935 63.158 0.73 0.00 44.15 3.67
7603 19242 1.227176 GGATCCCGGAACAGTACGC 60.227 63.158 0.73 0.00 0.00 4.42
7608 19247 1.736645 CCGGAACAGTACGCTGGTG 60.737 63.158 0.00 0.00 43.85 4.17
7609 19248 2.380410 CGGAACAGTACGCTGGTGC 61.380 63.158 0.00 0.00 43.85 5.01
7610 19249 1.004918 GGAACAGTACGCTGGTGCT 60.005 57.895 0.00 0.00 45.71 4.40
7615 19254 2.914379 AGTACGCTGGTGCTGTTTC 58.086 52.632 0.00 0.00 37.74 2.78
7617 19256 0.882927 GTACGCTGGTGCTGTTTCCA 60.883 55.000 0.00 0.00 36.97 3.53
7618 19257 0.036164 TACGCTGGTGCTGTTTCCAT 59.964 50.000 0.00 0.00 36.97 3.41
7619 19258 1.210931 CGCTGGTGCTGTTTCCATG 59.789 57.895 0.00 0.00 36.97 3.66
7620 19259 1.518056 CGCTGGTGCTGTTTCCATGT 61.518 55.000 0.00 0.00 36.97 3.21
7621 19260 0.038892 GCTGGTGCTGTTTCCATGTG 60.039 55.000 0.00 0.00 36.03 3.21
7623 19262 0.467844 TGGTGCTGTTTCCATGTGCT 60.468 50.000 0.00 0.00 0.00 4.40
7624 19263 0.038892 GGTGCTGTTTCCATGTGCTG 60.039 55.000 0.00 0.00 0.00 4.41
7626 19265 1.080298 GCTGTTTCCATGTGCTGCC 60.080 57.895 0.00 0.00 0.00 4.85
7628 19267 0.896940 CTGTTTCCATGTGCTGCCCT 60.897 55.000 0.00 0.00 0.00 5.19
7629 19268 0.895100 TGTTTCCATGTGCTGCCCTC 60.895 55.000 0.00 0.00 0.00 4.30
7630 19269 1.675310 TTTCCATGTGCTGCCCTCG 60.675 57.895 0.00 0.00 0.00 4.63
7631 19270 3.626996 TTCCATGTGCTGCCCTCGG 62.627 63.158 0.00 0.00 0.00 4.63
7632 19271 4.100084 CCATGTGCTGCCCTCGGA 62.100 66.667 0.00 0.00 0.00 4.55
7634 19273 4.457496 ATGTGCTGCCCTCGGACG 62.457 66.667 0.00 0.00 0.00 4.79
7663 19302 5.269459 CGGAGCGTGAATCAAATATTAGG 57.731 43.478 0.00 0.00 0.00 2.69
7664 19303 4.988540 CGGAGCGTGAATCAAATATTAGGA 59.011 41.667 0.00 0.00 0.00 2.94
7666 19305 5.409826 GGAGCGTGAATCAAATATTAGGAGG 59.590 44.000 0.00 0.00 0.00 4.30
7667 19306 5.308825 AGCGTGAATCAAATATTAGGAGGG 58.691 41.667 0.00 0.00 0.00 4.30
7668 19307 4.455877 GCGTGAATCAAATATTAGGAGGGG 59.544 45.833 0.00 0.00 0.00 4.79
7670 19309 4.767409 GTGAATCAAATATTAGGAGGGGCC 59.233 45.833 0.00 0.00 0.00 5.80
7672 19311 5.103301 TGAATCAAATATTAGGAGGGGCCAA 60.103 40.000 4.39 0.00 40.02 4.52
7673 19312 4.890499 TCAAATATTAGGAGGGGCCAAA 57.110 40.909 4.39 0.00 40.02 3.28
7674 19313 5.417170 TCAAATATTAGGAGGGGCCAAAT 57.583 39.130 4.39 0.00 40.02 2.32
7675 19314 5.147032 TCAAATATTAGGAGGGGCCAAATG 58.853 41.667 4.39 0.00 40.02 2.32
7676 19315 5.103301 TCAAATATTAGGAGGGGCCAAATGA 60.103 40.000 4.39 0.00 40.02 2.57
7677 19316 4.664688 ATATTAGGAGGGGCCAAATGAG 57.335 45.455 4.39 0.00 40.02 2.90
7680 19319 1.142688 AGGAGGGGCCAAATGAGTGT 61.143 55.000 4.39 0.00 40.02 3.55
7681 19320 0.623723 GGAGGGGCCAAATGAGTGTA 59.376 55.000 4.39 0.00 36.34 2.90
7682 19321 1.215423 GGAGGGGCCAAATGAGTGTAT 59.785 52.381 4.39 0.00 36.34 2.29
7683 19322 2.441750 GGAGGGGCCAAATGAGTGTATA 59.558 50.000 4.39 0.00 36.34 1.47
7684 19323 3.074538 GGAGGGGCCAAATGAGTGTATAT 59.925 47.826 4.39 0.00 36.34 0.86
7685 19324 4.074970 GAGGGGCCAAATGAGTGTATATG 58.925 47.826 4.39 0.00 0.00 1.78
7693 19332 7.984422 CCAAATGAGTGTATATGGCATAGAA 57.016 36.000 13.39 0.84 0.00 2.10
7696 19335 9.888878 CAAATGAGTGTATATGGCATAGAAAAG 57.111 33.333 13.39 0.00 0.00 2.27
7698 19337 5.997746 TGAGTGTATATGGCATAGAAAAGGC 59.002 40.000 13.39 0.00 0.00 4.35
7699 19338 6.183361 TGAGTGTATATGGCATAGAAAAGGCT 60.183 38.462 13.39 4.71 0.00 4.58
7700 19339 7.016170 TGAGTGTATATGGCATAGAAAAGGCTA 59.984 37.037 13.39 0.00 0.00 3.93
7701 19340 7.390027 AGTGTATATGGCATAGAAAAGGCTAG 58.610 38.462 13.39 0.00 0.00 3.42
7703 19342 6.500400 TGTATATGGCATAGAAAAGGCTAGGA 59.500 38.462 13.39 0.00 0.00 2.94
7704 19343 6.649041 ATATGGCATAGAAAAGGCTAGGAT 57.351 37.500 13.39 0.00 0.00 3.24
7707 19346 4.352001 TGGCATAGAAAAGGCTAGGATGAT 59.648 41.667 0.00 0.00 0.00 2.45
7708 19347 4.940654 GGCATAGAAAAGGCTAGGATGATC 59.059 45.833 0.00 0.00 0.00 2.92
7709 19348 5.513788 GGCATAGAAAAGGCTAGGATGATCA 60.514 44.000 0.00 0.00 0.00 2.92
7710 19349 5.642919 GCATAGAAAAGGCTAGGATGATCAG 59.357 44.000 0.09 0.00 0.00 2.90
7712 19351 5.549742 AGAAAAGGCTAGGATGATCAGAG 57.450 43.478 0.09 0.00 0.00 3.35
7713 19352 5.215069 AGAAAAGGCTAGGATGATCAGAGA 58.785 41.667 0.09 0.00 0.00 3.10
7715 19354 2.513753 AGGCTAGGATGATCAGAGACG 58.486 52.381 0.09 0.00 0.00 4.18
7717 19356 1.067915 GCTAGGATGATCAGAGACGCC 60.068 57.143 0.09 0.00 0.00 5.68
7718 19357 1.198867 CTAGGATGATCAGAGACGCCG 59.801 57.143 0.09 0.00 0.00 6.46
7719 19358 1.006805 GGATGATCAGAGACGCCGG 60.007 63.158 0.09 0.00 0.00 6.13
7720 19359 1.456196 GGATGATCAGAGACGCCGGA 61.456 60.000 5.05 0.00 0.00 5.14
7735 19374 3.293311 GCCGGACGATTAGTATAGCAA 57.707 47.619 5.05 0.00 0.00 3.91
7736 19375 3.846360 GCCGGACGATTAGTATAGCAAT 58.154 45.455 5.05 0.00 0.00 3.56
7737 19376 4.243270 GCCGGACGATTAGTATAGCAATT 58.757 43.478 5.05 0.00 0.00 2.32
7739 19378 5.515626 GCCGGACGATTAGTATAGCAATTAG 59.484 44.000 5.05 0.00 0.00 1.73
7740 19379 5.515626 CCGGACGATTAGTATAGCAATTAGC 59.484 44.000 0.00 0.00 46.19 3.09
7775 21631 9.981114 AAGTGTATTTGGTAAATTTTCCTCTTG 57.019 29.630 14.18 0.00 32.38 3.02
7776 21632 8.585018 AGTGTATTTGGTAAATTTTCCTCTTGG 58.415 33.333 14.18 0.00 32.38 3.61
7777 21633 8.581578 GTGTATTTGGTAAATTTTCCTCTTGGA 58.418 33.333 14.18 0.00 34.95 3.53
7778 21634 9.148879 TGTATTTGGTAAATTTTCCTCTTGGAA 57.851 29.630 14.18 0.00 40.00 3.53
7779 21635 9.639601 GTATTTGGTAAATTTTCCTCTTGGAAG 57.360 33.333 14.18 0.00 41.26 3.46
7780 21636 8.811994 TATTTGGTAAATTTTCCTCTTGGAAGG 58.188 33.333 14.18 0.00 41.26 3.46
7802 21658 2.440247 CCAGGGCCCGGAATTGTC 60.440 66.667 25.19 0.00 0.00 3.18
7803 21659 2.440247 CAGGGCCCGGAATTGTCC 60.440 66.667 18.42 0.00 41.01 4.02
7804 21660 3.739613 AGGGCCCGGAATTGTCCC 61.740 66.667 18.44 3.25 41.44 4.46
7808 21664 3.087065 CCCGGAATTGTCCCCACT 58.913 61.111 0.73 0.00 41.44 4.00
7809 21665 1.917336 GCCCGGAATTGTCCCCACTA 61.917 60.000 0.73 0.00 41.44 2.74
7810 21666 0.107361 CCCGGAATTGTCCCCACTAC 60.107 60.000 0.73 0.00 41.44 2.73
7811 21667 0.461339 CCGGAATTGTCCCCACTACG 60.461 60.000 0.00 0.00 41.44 3.51
7813 21669 0.252197 GGAATTGTCCCCACTACGCT 59.748 55.000 0.00 0.00 38.08 5.07
7816 21672 2.154567 ATTGTCCCCACTACGCTCTA 57.845 50.000 0.00 0.00 0.00 2.43
7817 21673 2.154567 TTGTCCCCACTACGCTCTAT 57.845 50.000 0.00 0.00 0.00 1.98
7818 21674 1.399714 TGTCCCCACTACGCTCTATG 58.600 55.000 0.00 0.00 0.00 2.23
7820 21676 0.554305 TCCCCACTACGCTCTATGGA 59.446 55.000 0.00 0.00 33.80 3.41
7821 21677 0.674534 CCCCACTACGCTCTATGGAC 59.325 60.000 0.00 0.00 33.80 4.02
7825 21681 0.381089 ACTACGCTCTATGGACGCAC 59.619 55.000 2.04 0.00 0.00 5.34
7826 21682 0.663688 CTACGCTCTATGGACGCACT 59.336 55.000 2.04 0.00 0.00 4.40
7827 21683 1.871676 CTACGCTCTATGGACGCACTA 59.128 52.381 2.04 0.00 0.00 2.74
7828 21684 1.319541 ACGCTCTATGGACGCACTAT 58.680 50.000 2.04 0.00 0.00 2.12
7829 21685 1.001268 ACGCTCTATGGACGCACTATG 60.001 52.381 2.04 0.00 0.00 2.23
7830 21686 1.001268 CGCTCTATGGACGCACTATGT 60.001 52.381 2.52 0.00 0.00 2.29
7840 21696 4.115279 CACTATGTGCTGCCCTCG 57.885 61.111 0.00 0.00 0.00 4.63
7841 21697 1.522355 CACTATGTGCTGCCCTCGG 60.522 63.158 0.00 0.00 0.00 4.63
7842 21698 2.109799 CTATGTGCTGCCCTCGGG 59.890 66.667 0.00 0.00 38.57 5.14
7852 21708 4.609018 CCCTCGGGCGCACTATGG 62.609 72.222 8.62 6.79 0.00 2.74
7853 21709 3.536917 CCTCGGGCGCACTATGGA 61.537 66.667 8.62 0.00 0.00 3.41
7854 21710 2.737180 CTCGGGCGCACTATGGAT 59.263 61.111 8.62 0.00 0.00 3.41
7856 21712 0.532862 CTCGGGCGCACTATGGATTT 60.533 55.000 8.62 0.00 0.00 2.17
7857 21713 0.813610 TCGGGCGCACTATGGATTTG 60.814 55.000 8.62 0.00 0.00 2.32
7860 21716 1.202290 GGGCGCACTATGGATTTGTTG 60.202 52.381 10.83 0.00 0.00 3.33
7861 21717 1.548986 GCGCACTATGGATTTGTTGC 58.451 50.000 0.30 0.00 0.00 4.17
7862 21718 1.813896 CGCACTATGGATTTGTTGCG 58.186 50.000 0.00 0.00 38.15 4.85
7863 21719 1.531677 CGCACTATGGATTTGTTGCGG 60.532 52.381 5.89 0.00 40.28 5.69
7864 21720 1.798813 GCACTATGGATTTGTTGCGGC 60.799 52.381 0.00 0.00 0.00 6.53
7865 21721 0.732571 ACTATGGATTTGTTGCGGCG 59.267 50.000 0.51 0.51 0.00 6.46
7866 21722 1.013596 CTATGGATTTGTTGCGGCGA 58.986 50.000 12.98 0.00 0.00 5.54
7868 21724 0.101040 ATGGATTTGTTGCGGCGATG 59.899 50.000 12.98 0.00 0.00 3.84
7869 21725 1.240641 TGGATTTGTTGCGGCGATGT 61.241 50.000 12.98 0.00 0.00 3.06
7870 21726 0.523335 GGATTTGTTGCGGCGATGTC 60.523 55.000 12.98 0.00 0.00 3.06
7871 21727 0.523335 GATTTGTTGCGGCGATGTCC 60.523 55.000 12.98 0.00 0.00 4.02
7882 21738 2.750237 GATGTCCGCCCCGCTTTT 60.750 61.111 0.00 0.00 0.00 2.27
7883 21739 3.051392 GATGTCCGCCCCGCTTTTG 62.051 63.158 0.00 0.00 0.00 2.44
7885 21741 3.292159 GTCCGCCCCGCTTTTGTT 61.292 61.111 0.00 0.00 0.00 2.83
7886 21742 3.291383 TCCGCCCCGCTTTTGTTG 61.291 61.111 0.00 0.00 0.00 3.33
7887 21743 4.356442 CCGCCCCGCTTTTGTTGG 62.356 66.667 0.00 0.00 0.00 3.77
7888 21744 4.356442 CGCCCCGCTTTTGTTGGG 62.356 66.667 0.00 0.00 42.92 4.12
7890 21746 3.047735 CCCCGCTTTTGTTGGGTC 58.952 61.111 0.00 0.00 41.63 4.46
7891 21747 1.530655 CCCCGCTTTTGTTGGGTCT 60.531 57.895 0.00 0.00 41.63 3.85
7892 21748 1.524008 CCCCGCTTTTGTTGGGTCTC 61.524 60.000 0.00 0.00 41.63 3.36
7894 21750 0.593128 CCGCTTTTGTTGGGTCTCTG 59.407 55.000 0.00 0.00 0.00 3.35
7896 21752 1.002468 CGCTTTTGTTGGGTCTCTGTG 60.002 52.381 0.00 0.00 0.00 3.66
7897 21753 1.269257 GCTTTTGTTGGGTCTCTGTGC 60.269 52.381 0.00 0.00 0.00 4.57
7898 21754 1.338020 CTTTTGTTGGGTCTCTGTGCC 59.662 52.381 0.00 0.00 0.00 5.01
7899 21755 0.467290 TTTGTTGGGTCTCTGTGCCC 60.467 55.000 0.00 0.00 45.04 5.36
7902 21758 2.528818 TTGGGTCTCTGTGCCCCTG 61.529 63.158 0.00 0.00 44.20 4.45
7903 21759 3.721706 GGGTCTCTGTGCCCCTGG 61.722 72.222 0.00 0.00 38.99 4.45
7905 21761 2.348998 GTCTCTGTGCCCCTGGTG 59.651 66.667 0.00 0.00 0.00 4.17
7906 21762 2.204034 TCTCTGTGCCCCTGGTGA 59.796 61.111 0.00 0.00 0.00 4.02
7907 21763 2.217038 TCTCTGTGCCCCTGGTGAC 61.217 63.158 0.00 0.00 0.00 3.67
7908 21764 3.249189 TCTGTGCCCCTGGTGACC 61.249 66.667 0.00 0.00 0.00 4.02
7909 21765 3.569210 CTGTGCCCCTGGTGACCA 61.569 66.667 3.40 3.40 0.00 4.02
7910 21766 2.858476 TGTGCCCCTGGTGACCAT 60.858 61.111 4.03 0.00 30.82 3.55
7913 21769 2.273449 GCCCCTGGTGACCATGAG 59.727 66.667 4.03 0.00 30.82 2.90
7914 21770 2.606587 GCCCCTGGTGACCATGAGT 61.607 63.158 4.03 0.00 30.82 3.41
7916 21772 0.322816 CCCCTGGTGACCATGAGTTG 60.323 60.000 4.03 0.00 30.82 3.16
7927 21783 1.788258 CATGAGTTGGATCGGATCGG 58.212 55.000 11.62 0.00 0.00 4.18
7928 21784 1.069204 CATGAGTTGGATCGGATCGGT 59.931 52.381 11.62 0.00 0.00 4.69
7929 21785 2.061509 TGAGTTGGATCGGATCGGTA 57.938 50.000 11.62 0.00 0.00 4.02
7930 21786 2.380941 TGAGTTGGATCGGATCGGTAA 58.619 47.619 11.62 4.72 0.00 2.85
7931 21787 2.361119 TGAGTTGGATCGGATCGGTAAG 59.639 50.000 11.62 0.00 0.00 2.34
7932 21788 2.621998 GAGTTGGATCGGATCGGTAAGA 59.378 50.000 11.62 0.00 0.00 2.10
7935 21791 2.871453 TGGATCGGATCGGTAAGATGA 58.129 47.619 11.62 0.00 40.26 2.92
7936 21792 3.431415 TGGATCGGATCGGTAAGATGAT 58.569 45.455 11.62 0.00 40.26 2.45
7937 21793 3.193479 TGGATCGGATCGGTAAGATGATG 59.807 47.826 11.62 0.00 40.26 3.07
7938 21794 3.193691 GGATCGGATCGGTAAGATGATGT 59.806 47.826 11.62 0.00 40.26 3.06
7939 21795 4.398358 GGATCGGATCGGTAAGATGATGTA 59.602 45.833 11.62 0.00 40.26 2.29
7941 21797 3.756963 TCGGATCGGTAAGATGATGTAGG 59.243 47.826 0.00 0.00 40.26 3.18
7942 21798 3.119459 CGGATCGGTAAGATGATGTAGGG 60.119 52.174 0.00 0.00 40.26 3.53
7943 21799 3.195825 GGATCGGTAAGATGATGTAGGGG 59.804 52.174 0.00 0.00 40.26 4.79
7944 21800 2.605257 TCGGTAAGATGATGTAGGGGG 58.395 52.381 0.00 0.00 0.00 5.40
7970 21826 2.124983 CCGGCATGGTGGACAGAG 60.125 66.667 0.00 0.00 0.00 3.35
7971 21827 2.665000 CGGCATGGTGGACAGAGT 59.335 61.111 0.00 0.00 0.00 3.24
7972 21828 1.448540 CGGCATGGTGGACAGAGTC 60.449 63.158 0.00 0.00 0.00 3.36
7983 21839 0.448593 GACAGAGTCCTTCTCCGACG 59.551 60.000 0.00 0.00 43.71 5.12
7984 21840 0.036448 ACAGAGTCCTTCTCCGACGA 59.964 55.000 0.00 0.00 43.71 4.20
7987 21843 2.030185 CAGAGTCCTTCTCCGACGAAAA 60.030 50.000 0.00 0.00 43.71 2.29
7988 21844 2.030096 AGAGTCCTTCTCCGACGAAAAC 60.030 50.000 0.00 0.00 43.71 2.43
7989 21845 1.000618 AGTCCTTCTCCGACGAAAACC 59.999 52.381 0.00 0.00 35.33 3.27
7990 21846 0.319405 TCCTTCTCCGACGAAAACCC 59.681 55.000 0.00 0.00 0.00 4.11
7991 21847 0.320697 CCTTCTCCGACGAAAACCCT 59.679 55.000 0.00 0.00 0.00 4.34
7992 21848 1.547372 CCTTCTCCGACGAAAACCCTA 59.453 52.381 0.00 0.00 0.00 3.53
7993 21849 2.603953 CTTCTCCGACGAAAACCCTAC 58.396 52.381 0.00 0.00 0.00 3.18
7994 21850 0.523072 TCTCCGACGAAAACCCTACG 59.477 55.000 0.00 0.00 0.00 3.51
7995 21851 1.074872 CTCCGACGAAAACCCTACGC 61.075 60.000 0.00 0.00 0.00 4.42
7996 21852 2.096442 CCGACGAAAACCCTACGCC 61.096 63.158 0.00 0.00 0.00 5.68
8001 21857 1.022982 CGAAAACCCTACGCCTTCCC 61.023 60.000 0.00 0.00 0.00 3.97
8002 21858 0.037160 GAAAACCCTACGCCTTCCCA 59.963 55.000 0.00 0.00 0.00 4.37
8003 21859 0.251033 AAAACCCTACGCCTTCCCAC 60.251 55.000 0.00 0.00 0.00 4.61
8004 21860 1.420532 AAACCCTACGCCTTCCCACA 61.421 55.000 0.00 0.00 0.00 4.17
8005 21861 1.420532 AACCCTACGCCTTCCCACAA 61.421 55.000 0.00 0.00 0.00 3.33
8006 21862 1.078426 CCCTACGCCTTCCCACAAG 60.078 63.158 0.00 0.00 0.00 3.16
8008 21864 1.550130 CCTACGCCTTCCCACAAGGA 61.550 60.000 4.49 0.00 45.68 3.36
8017 21873 0.472471 TCCCACAAGGAACCAGACAC 59.528 55.000 0.00 0.00 43.78 3.67
8018 21874 0.884704 CCCACAAGGAACCAGACACG 60.885 60.000 0.00 0.00 38.24 4.49
8020 21876 1.502231 CACAAGGAACCAGACACGAG 58.498 55.000 0.00 0.00 0.00 4.18
8021 21877 0.393077 ACAAGGAACCAGACACGAGG 59.607 55.000 0.00 0.00 0.00 4.63
8022 21878 0.320771 CAAGGAACCAGACACGAGGG 60.321 60.000 0.00 0.00 0.00 4.30
8023 21879 2.047179 GGAACCAGACACGAGGGC 60.047 66.667 0.00 0.00 0.00 5.19
8024 21880 2.047179 GAACCAGACACGAGGGCC 60.047 66.667 0.00 0.00 0.00 5.80
8025 21881 2.526873 AACCAGACACGAGGGCCT 60.527 61.111 5.25 5.25 0.00 5.19
8026 21882 2.508586 GAACCAGACACGAGGGCCTC 62.509 65.000 24.06 24.06 0.00 4.70
8042 21898 2.611518 GCCTCGCCATATACAGACATC 58.388 52.381 0.00 0.00 0.00 3.06
8043 21899 2.868662 CCTCGCCATATACAGACATCG 58.131 52.381 0.00 0.00 0.00 3.84
8044 21900 2.416027 CCTCGCCATATACAGACATCGG 60.416 54.545 0.00 0.00 0.00 4.18
8045 21901 1.544246 TCGCCATATACAGACATCGGG 59.456 52.381 0.00 0.00 0.00 5.14
8046 21902 1.404181 CGCCATATACAGACATCGGGG 60.404 57.143 0.00 0.00 0.00 5.73
8048 21904 2.353803 GCCATATACAGACATCGGGGAC 60.354 54.545 0.00 0.00 0.00 4.46
8061 21917 4.489771 GGGACGGGGCTCATGGTG 62.490 72.222 0.00 0.00 0.00 4.17
8065 21921 2.438434 CGGGGCTCATGGTGGAAC 60.438 66.667 0.00 0.00 0.00 3.62
8066 21922 2.438434 GGGGCTCATGGTGGAACG 60.438 66.667 0.00 0.00 38.12 3.95
8067 21923 3.134127 GGGCTCATGGTGGAACGC 61.134 66.667 0.00 0.00 38.12 4.84
8068 21924 2.359850 GGCTCATGGTGGAACGCA 60.360 61.111 0.00 0.00 43.02 5.24
8069 21925 2.690778 GGCTCATGGTGGAACGCAC 61.691 63.158 0.00 0.00 43.02 5.34
8070 21926 2.690778 GCTCATGGTGGAACGCACC 61.691 63.158 3.93 3.93 43.02 5.01
8071 21927 2.033448 TCATGGTGGAACGCACCC 59.967 61.111 8.04 0.00 43.02 4.61
8072 21928 2.034066 CATGGTGGAACGCACCCT 59.966 61.111 8.04 0.00 43.02 4.34
8073 21929 2.034066 ATGGTGGAACGCACCCTG 59.966 61.111 8.04 0.00 43.02 4.45
8075 21931 2.063015 ATGGTGGAACGCACCCTGAA 62.063 55.000 8.04 0.00 43.02 3.02
8076 21932 1.303317 GGTGGAACGCACCCTGAAT 60.303 57.895 0.00 0.00 43.02 2.57
8077 21933 0.893727 GGTGGAACGCACCCTGAATT 60.894 55.000 0.00 0.00 43.02 2.17
8078 21934 0.958822 GTGGAACGCACCCTGAATTT 59.041 50.000 0.00 0.00 39.55 1.82
8079 21935 1.068541 GTGGAACGCACCCTGAATTTC 60.069 52.381 0.00 0.00 39.55 2.17
8080 21936 0.168128 GGAACGCACCCTGAATTTCG 59.832 55.000 0.00 0.00 0.00 3.46
8082 21938 0.872388 AACGCACCCTGAATTTCGTC 59.128 50.000 0.00 0.00 0.00 4.20
8083 21939 0.250124 ACGCACCCTGAATTTCGTCA 60.250 50.000 0.00 0.00 0.00 4.35
8084 21940 1.086696 CGCACCCTGAATTTCGTCAT 58.913 50.000 0.00 0.00 0.00 3.06
8085 21941 1.062587 CGCACCCTGAATTTCGTCATC 59.937 52.381 0.00 0.00 0.00 2.92
8086 21942 2.359900 GCACCCTGAATTTCGTCATCT 58.640 47.619 0.00 0.00 0.00 2.90
8087 21943 2.749621 GCACCCTGAATTTCGTCATCTT 59.250 45.455 0.00 0.00 0.00 2.40
8089 21945 3.753272 CACCCTGAATTTCGTCATCTTGT 59.247 43.478 0.00 0.00 0.00 3.16
8091 21947 5.063944 CACCCTGAATTTCGTCATCTTGTAG 59.936 44.000 0.00 0.00 0.00 2.74
8094 21950 5.292101 CCTGAATTTCGTCATCTTGTAGACC 59.708 44.000 0.00 0.00 0.00 3.85
8095 21951 5.789521 TGAATTTCGTCATCTTGTAGACCA 58.210 37.500 0.00 0.00 0.00 4.02
8096 21952 5.637810 TGAATTTCGTCATCTTGTAGACCAC 59.362 40.000 0.00 0.00 0.00 4.16
8097 21953 4.594123 TTTCGTCATCTTGTAGACCACA 57.406 40.909 0.00 0.00 34.51 4.17
8098 21954 3.570926 TCGTCATCTTGTAGACCACAC 57.429 47.619 0.00 0.00 36.69 3.82
8100 21956 3.319689 TCGTCATCTTGTAGACCACACAA 59.680 43.478 0.00 0.00 36.69 3.33
8101 21957 4.055360 CGTCATCTTGTAGACCACACAAA 58.945 43.478 0.00 0.00 36.69 2.83
8102 21958 4.150627 CGTCATCTTGTAGACCACACAAAG 59.849 45.833 0.00 0.00 36.69 2.77
8103 21959 4.065088 TCATCTTGTAGACCACACAAAGC 58.935 43.478 0.00 0.00 36.69 3.51
8104 21960 3.838244 TCTTGTAGACCACACAAAGCT 57.162 42.857 0.00 0.00 36.69 3.74
8105 21961 4.948341 TCTTGTAGACCACACAAAGCTA 57.052 40.909 0.00 0.00 36.69 3.32
8106 21962 4.628074 TCTTGTAGACCACACAAAGCTAC 58.372 43.478 0.00 0.00 36.69 3.58
8109 21965 4.377021 TGTAGACCACACAAAGCTACAAG 58.623 43.478 0.00 0.00 38.64 3.16
8110 21966 2.222027 AGACCACACAAAGCTACAAGC 58.778 47.619 0.00 0.00 42.84 4.01
8111 21967 1.266989 GACCACACAAAGCTACAAGCC 59.733 52.381 0.00 0.00 43.77 4.35
8112 21968 0.238289 CCACACAAAGCTACAAGCCG 59.762 55.000 0.00 0.00 43.77 5.52
8113 21969 1.225855 CACACAAAGCTACAAGCCGA 58.774 50.000 0.00 0.00 43.77 5.54
8114 21970 1.069906 CACACAAAGCTACAAGCCGAC 60.070 52.381 0.00 0.00 43.77 4.79
8115 21971 0.163788 CACAAAGCTACAAGCCGACG 59.836 55.000 0.00 0.00 43.77 5.12
8125 21981 3.812019 AGCCGACGCTACGACCTG 61.812 66.667 0.00 0.00 46.08 4.00
8127 21983 4.111016 CCGACGCTACGACCTGCA 62.111 66.667 0.00 0.00 35.09 4.41
8128 21984 2.577112 CGACGCTACGACCTGCAG 60.577 66.667 6.78 6.78 35.09 4.41
8129 21985 2.881352 GACGCTACGACCTGCAGC 60.881 66.667 8.66 0.00 0.00 5.25
8130 21986 3.626680 GACGCTACGACCTGCAGCA 62.627 63.158 8.66 0.00 34.94 4.41
8131 21987 2.432456 CGCTACGACCTGCAGCAA 60.432 61.111 8.66 0.00 34.94 3.91
8132 21988 1.811266 CGCTACGACCTGCAGCAAT 60.811 57.895 8.66 0.00 34.94 3.56
8133 21989 1.717937 GCTACGACCTGCAGCAATG 59.282 57.895 8.66 0.00 35.35 2.82
8134 21990 1.021390 GCTACGACCTGCAGCAATGT 61.021 55.000 8.66 6.28 35.35 2.71
8136 21992 2.780643 CGACCTGCAGCAATGTCG 59.219 61.111 24.57 24.57 43.64 4.35
8137 21993 4.284123 GACCTGCAGCAATGTCGA 57.716 55.556 8.66 0.00 0.00 4.20
8139 21995 1.959899 GACCTGCAGCAATGTCGACG 61.960 60.000 8.66 0.00 0.00 5.12
8140 21996 2.029288 CCTGCAGCAATGTCGACGT 61.029 57.895 8.66 7.97 0.00 4.34
8141 21997 1.417592 CTGCAGCAATGTCGACGTC 59.582 57.895 11.41 5.18 0.00 4.34
8142 21998 1.006220 TGCAGCAATGTCGACGTCT 60.006 52.632 11.41 1.63 0.00 4.18
8143 21999 1.284297 TGCAGCAATGTCGACGTCTG 61.284 55.000 17.79 17.79 0.00 3.51
8144 22000 1.417592 CAGCAATGTCGACGTCTGC 59.582 57.895 24.83 24.83 0.00 4.26
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
132 138 2.586079 CGGGCCATGTAGTGCGAG 60.586 66.667 4.39 0.00 0.00 5.03
204 215 7.639945 AGACAAAAGAAATTACCACGAAGAAG 58.360 34.615 0.00 0.00 0.00 2.85
211 250 9.803315 AAGAAGAAAGACAAAAGAAATTACCAC 57.197 29.630 0.00 0.00 0.00 4.16
454 527 3.126831 GGTTGATATCCAAGAGCGTGAG 58.873 50.000 0.00 0.00 35.03 3.51
457 530 1.141053 GGGGTTGATATCCAAGAGCGT 59.859 52.381 0.00 0.00 35.03 5.07
519 602 7.013846 ACAGAGAGGAAACAGAGCATATACTAC 59.986 40.741 0.00 0.00 0.00 2.73
521 604 5.896678 ACAGAGAGGAAACAGAGCATATACT 59.103 40.000 0.00 0.00 0.00 2.12
602 691 3.678806 CGGATAGAGGCTGTACTGCAAAA 60.679 47.826 23.89 8.52 34.04 2.44
820 1285 2.733671 CTCGTCGTGTGCAGCCATG 61.734 63.158 0.00 0.00 0.00 3.66
932 1397 1.202806 CCACCAAGACTGCTTCTCCAA 60.203 52.381 0.00 0.00 31.02 3.53
978 1443 0.869730 GGTTTGCCACATAACGACGT 59.130 50.000 0.00 0.00 34.09 4.34
1772 2239 2.917933 TGGTTGAGACAGTGAACCAAG 58.082 47.619 10.82 0.00 44.84 3.61
2091 2563 6.494893 TGAGCATGAAGTTGTAACCAATAC 57.505 37.500 0.00 0.00 32.11 1.89
2154 2627 3.430453 CTGACAATGGCCCCTAGAAAAA 58.570 45.455 0.00 0.00 0.00 1.94
2653 3574 5.279306 GGAACTTTTTGGGGGAACTTCATAC 60.279 44.000 0.00 0.00 0.00 2.39
2663 3584 1.627864 ATGTCGGAACTTTTTGGGGG 58.372 50.000 0.00 0.00 0.00 5.40
2962 6601 5.234757 CACCAGTAGAGACTACGTATGAGAC 59.765 48.000 0.00 0.00 33.32 3.36
3034 6673 6.964464 TGAGACAAGATTCCTCTAGAGTAGT 58.036 40.000 18.42 0.00 0.00 2.73
3302 6965 9.745018 TCCTCAAATCTGTCTCATTTTTATCTT 57.255 29.630 0.00 0.00 0.00 2.40
3303 6966 9.745018 TTCCTCAAATCTGTCTCATTTTTATCT 57.255 29.630 0.00 0.00 0.00 1.98
3479 7175 9.120538 TGAGCCTGTATATGTTTCTTTTATTCC 57.879 33.333 0.00 0.00 0.00 3.01
3668 7403 9.314501 GTGAAGTTTAAAGTAGTTTAGCATTCG 57.685 33.333 3.09 0.00 29.71 3.34
3936 7734 6.498304 ACTTCACTTTGACAGCTACAAAATG 58.502 36.000 15.81 15.81 36.33 2.32
4657 10728 4.056050 CAGATGTATTGCCCGGTTACTAC 58.944 47.826 0.00 0.00 0.00 2.73
4763 10982 5.621197 TTCGTTTATACATATGCATGCCC 57.379 39.130 16.68 0.00 35.39 5.36
6464 15090 0.768221 ACAGCCTTCCCCACTGAGAA 60.768 55.000 0.00 0.00 35.38 2.87
6512 15138 4.442706 CCTGTCAATCCTAACTTGCGTAT 58.557 43.478 0.00 0.00 0.00 3.06
6665 15294 1.959282 CTTGAGGCTCTGCAGGTTTTT 59.041 47.619 15.13 0.00 0.00 1.94
6926 15561 2.558359 CAAATCCCACCAACTTGAGGTC 59.442 50.000 0.00 0.00 37.23 3.85
7030 15671 1.300963 GAGGCTTGGCAGATGTGGA 59.699 57.895 0.00 0.00 0.00 4.02
7072 15716 0.973632 ACTTGGTATCACGCCAGTCA 59.026 50.000 0.00 0.00 37.31 3.41
7179 15824 4.816925 GCTAAATACACCCATCTGAAGGAC 59.183 45.833 0.00 0.00 0.00 3.85
7195 15840 4.638421 CCTCCGTCCATTTTGTGCTAAATA 59.362 41.667 0.00 0.00 0.00 1.40
7256 17854 6.706270 GGGACGTAATACATGAATGTCAAGAT 59.294 38.462 0.00 0.00 41.97 2.40
7258 17856 6.049149 AGGGACGTAATACATGAATGTCAAG 58.951 40.000 0.00 0.00 41.97 3.02
7271 17869 8.757982 AAATACTACAAGAGAGGGACGTAATA 57.242 34.615 0.00 0.00 0.00 0.98
7272 17870 7.201893 GGAAATACTACAAGAGAGGGACGTAAT 60.202 40.741 0.00 0.00 0.00 1.89
7276 17874 4.645588 AGGAAATACTACAAGAGAGGGACG 59.354 45.833 0.00 0.00 0.00 4.79
7277 17875 6.547930 AAGGAAATACTACAAGAGAGGGAC 57.452 41.667 0.00 0.00 0.00 4.46
7279 17877 7.168905 ACAAAAGGAAATACTACAAGAGAGGG 58.831 38.462 0.00 0.00 0.00 4.30
7280 17878 9.152595 GTACAAAAGGAAATACTACAAGAGAGG 57.847 37.037 0.00 0.00 0.00 3.69
7316 17914 7.008941 CCGTTGTAGCTAGGGGGTATATATAT 58.991 42.308 0.00 0.00 0.00 0.86
7319 17917 4.603131 CCGTTGTAGCTAGGGGGTATATA 58.397 47.826 0.00 0.00 0.00 0.86
7321 17919 2.880443 CCGTTGTAGCTAGGGGGTATA 58.120 52.381 0.00 0.00 0.00 1.47
7323 17921 1.044790 GCCGTTGTAGCTAGGGGGTA 61.045 60.000 0.00 0.00 0.00 3.69
7326 17924 1.144057 CAGCCGTTGTAGCTAGGGG 59.856 63.158 0.00 0.00 38.95 4.79
7328 17926 2.604046 AATCAGCCGTTGTAGCTAGG 57.396 50.000 0.00 0.00 38.95 3.02
7329 17927 7.598869 TCATATAAAATCAGCCGTTGTAGCTAG 59.401 37.037 0.00 0.00 38.95 3.42
7331 17929 6.288294 TCATATAAAATCAGCCGTTGTAGCT 58.712 36.000 0.00 0.00 42.70 3.32
7332 17930 6.539649 TCATATAAAATCAGCCGTTGTAGC 57.460 37.500 0.00 0.00 0.00 3.58
7334 17932 9.781834 CTTTTTCATATAAAATCAGCCGTTGTA 57.218 29.630 0.00 0.00 0.00 2.41
7335 17933 8.519526 TCTTTTTCATATAAAATCAGCCGTTGT 58.480 29.630 0.00 0.00 0.00 3.32
7336 17934 8.909708 TCTTTTTCATATAAAATCAGCCGTTG 57.090 30.769 0.00 0.00 0.00 4.10
7337 17935 8.190784 CCTCTTTTTCATATAAAATCAGCCGTT 58.809 33.333 0.00 0.00 0.00 4.44
7339 17937 6.638468 GCCTCTTTTTCATATAAAATCAGCCG 59.362 38.462 0.00 0.00 0.00 5.52
7341 17939 9.538508 AATGCCTCTTTTTCATATAAAATCAGC 57.461 29.630 0.00 0.00 0.00 4.26
7346 17944 9.734620 CGATGAATGCCTCTTTTTCATATAAAA 57.265 29.630 0.00 0.00 39.52 1.52
7349 17947 8.450578 AACGATGAATGCCTCTTTTTCATATA 57.549 30.769 0.00 0.00 39.52 0.86
7350 17948 6.949352 ACGATGAATGCCTCTTTTTCATAT 57.051 33.333 0.00 0.00 39.52 1.78
7351 17949 6.757897 AACGATGAATGCCTCTTTTTCATA 57.242 33.333 0.00 0.00 39.52 2.15
7390 18561 9.846248 GAGAATTGTGCTGTATAAATCAAAGTT 57.154 29.630 0.00 0.00 0.00 2.66
7391 18562 8.462016 GGAGAATTGTGCTGTATAAATCAAAGT 58.538 33.333 0.00 0.00 0.00 2.66
7392 18563 8.680903 AGGAGAATTGTGCTGTATAAATCAAAG 58.319 33.333 0.00 0.00 0.00 2.77
7393 18564 8.579850 AGGAGAATTGTGCTGTATAAATCAAA 57.420 30.769 0.00 0.00 0.00 2.69
7394 18565 8.049117 AGAGGAGAATTGTGCTGTATAAATCAA 58.951 33.333 0.00 0.00 0.00 2.57
7395 18566 7.568349 AGAGGAGAATTGTGCTGTATAAATCA 58.432 34.615 0.00 0.00 0.00 2.57
7396 18567 8.443953 AAGAGGAGAATTGTGCTGTATAAATC 57.556 34.615 0.00 0.00 0.00 2.17
7397 18568 8.814038 AAAGAGGAGAATTGTGCTGTATAAAT 57.186 30.769 0.00 0.00 0.00 1.40
7398 18569 8.635765 AAAAGAGGAGAATTGTGCTGTATAAA 57.364 30.769 0.00 0.00 0.00 1.40
7399 18570 8.635765 AAAAAGAGGAGAATTGTGCTGTATAA 57.364 30.769 0.00 0.00 0.00 0.98
7488 18659 7.148490 GGGGTTGTAATGTAAAATGTGCATTTC 60.148 37.037 10.15 1.11 39.26 2.17
7492 18663 4.588951 TGGGGTTGTAATGTAAAATGTGCA 59.411 37.500 0.00 0.00 0.00 4.57
7493 18664 5.140747 TGGGGTTGTAATGTAAAATGTGC 57.859 39.130 0.00 0.00 0.00 4.57
7494 18665 9.364989 CTTATTGGGGTTGTAATGTAAAATGTG 57.635 33.333 0.00 0.00 0.00 3.21
7495 18666 8.536175 CCTTATTGGGGTTGTAATGTAAAATGT 58.464 33.333 0.00 0.00 0.00 2.71
7505 19144 2.994581 TGGGTCCTTATTGGGGTTGTAA 59.005 45.455 0.00 0.00 36.20 2.41
7506 19145 2.645320 TGGGTCCTTATTGGGGTTGTA 58.355 47.619 0.00 0.00 36.20 2.41
7509 19148 1.273041 GCTTGGGTCCTTATTGGGGTT 60.273 52.381 0.00 0.00 36.20 4.11
7511 19150 0.397114 GGCTTGGGTCCTTATTGGGG 60.397 60.000 0.00 0.00 36.20 4.96
7517 19156 1.080638 ACAATGGGCTTGGGTCCTTA 58.919 50.000 0.00 0.00 39.30 2.69
7539 19178 2.670939 AGACGAGTCCATGATCCATCA 58.329 47.619 0.00 0.00 41.70 3.07
7546 19185 4.082845 AGAAAGAGAAGACGAGTCCATGA 58.917 43.478 0.00 0.00 0.00 3.07
7547 19186 4.448537 AGAAAGAGAAGACGAGTCCATG 57.551 45.455 0.00 0.00 0.00 3.66
7548 19187 5.476091 AAAGAAAGAGAAGACGAGTCCAT 57.524 39.130 0.00 0.00 0.00 3.41
7549 19188 4.939052 AAAGAAAGAGAAGACGAGTCCA 57.061 40.909 0.00 0.00 0.00 4.02
7550 19189 6.750039 CAGATAAAGAAAGAGAAGACGAGTCC 59.250 42.308 0.00 0.00 0.00 3.85
7551 19190 6.750039 CCAGATAAAGAAAGAGAAGACGAGTC 59.250 42.308 0.00 0.00 0.00 3.36
7556 19195 5.815222 GGCTCCAGATAAAGAAAGAGAAGAC 59.185 44.000 0.00 0.00 0.00 3.01
7571 19210 1.700042 GGATCCGTTGGGCTCCAGAT 61.700 60.000 0.00 0.00 46.09 2.90
7587 19226 1.515954 CAGCGTACTGTTCCGGGAT 59.484 57.895 0.00 0.00 39.22 3.85
7588 19227 2.642254 CCAGCGTACTGTTCCGGGA 61.642 63.158 0.00 0.00 42.81 5.14
7590 19229 1.736645 CACCAGCGTACTGTTCCGG 60.737 63.158 0.00 0.00 42.81 5.14
7591 19230 2.380410 GCACCAGCGTACTGTTCCG 61.380 63.158 0.00 0.00 42.81 4.30
7592 19231 3.562635 GCACCAGCGTACTGTTCC 58.437 61.111 0.00 0.00 42.81 3.62
7593 19232 0.600255 ACAGCACCAGCGTACTGTTC 60.600 55.000 0.00 0.00 42.85 3.18
7595 19234 0.179056 AAACAGCACCAGCGTACTGT 60.179 50.000 0.00 0.00 46.58 3.55
7612 19251 1.675310 CGAGGGCAGCACATGGAAA 60.675 57.895 0.00 0.00 0.00 3.13
7613 19252 2.046023 CGAGGGCAGCACATGGAA 60.046 61.111 0.00 0.00 0.00 3.53
7614 19253 4.100084 CCGAGGGCAGCACATGGA 62.100 66.667 0.00 0.00 0.00 3.41
7615 19254 4.100084 TCCGAGGGCAGCACATGG 62.100 66.667 0.00 0.00 0.00 3.66
7617 19256 4.457496 CGTCCGAGGGCAGCACAT 62.457 66.667 0.00 0.00 0.00 3.21
7638 19277 0.676466 ATTTGATTCACGCTCCGCCA 60.676 50.000 0.00 0.00 0.00 5.69
7639 19278 1.295792 TATTTGATTCACGCTCCGCC 58.704 50.000 0.00 0.00 0.00 6.13
7642 19281 5.409826 CCTCCTAATATTTGATTCACGCTCC 59.590 44.000 0.00 0.00 0.00 4.70
7644 19283 5.308825 CCCTCCTAATATTTGATTCACGCT 58.691 41.667 0.00 0.00 0.00 5.07
7645 19284 4.455877 CCCCTCCTAATATTTGATTCACGC 59.544 45.833 0.00 0.00 0.00 5.34
7646 19285 4.455877 GCCCCTCCTAATATTTGATTCACG 59.544 45.833 0.00 0.00 0.00 4.35
7647 19286 4.767409 GGCCCCTCCTAATATTTGATTCAC 59.233 45.833 0.00 0.00 0.00 3.18
7649 19288 4.998051 TGGCCCCTCCTAATATTTGATTC 58.002 43.478 0.00 0.00 35.26 2.52
7650 19289 5.417170 TTGGCCCCTCCTAATATTTGATT 57.583 39.130 0.00 0.00 35.26 2.57
7651 19290 5.417170 TTTGGCCCCTCCTAATATTTGAT 57.583 39.130 0.00 0.00 35.26 2.57
7655 19294 4.420214 ACTCATTTGGCCCCTCCTAATATT 59.580 41.667 0.00 0.00 38.04 1.28
7656 19295 3.990245 ACTCATTTGGCCCCTCCTAATAT 59.010 43.478 0.00 0.00 38.04 1.28
7657 19296 3.138283 CACTCATTTGGCCCCTCCTAATA 59.862 47.826 0.00 0.00 38.04 0.98
7658 19297 2.091665 CACTCATTTGGCCCCTCCTAAT 60.092 50.000 0.00 0.00 40.21 1.73
7660 19299 0.918983 CACTCATTTGGCCCCTCCTA 59.081 55.000 0.00 0.00 35.26 2.94
7661 19300 1.142688 ACACTCATTTGGCCCCTCCT 61.143 55.000 0.00 0.00 35.26 3.69
7663 19302 2.736670 ATACACTCATTTGGCCCCTC 57.263 50.000 0.00 0.00 0.00 4.30
7664 19303 3.181429 CCATATACACTCATTTGGCCCCT 60.181 47.826 0.00 0.00 0.00 4.79
7666 19305 2.558359 GCCATATACACTCATTTGGCCC 59.442 50.000 0.00 0.00 43.37 5.80
7667 19306 3.221771 TGCCATATACACTCATTTGGCC 58.778 45.455 12.88 0.00 46.53 5.36
7668 19307 5.939883 TCTATGCCATATACACTCATTTGGC 59.060 40.000 9.71 9.71 46.96 4.52
7670 19309 9.888878 CTTTTCTATGCCATATACACTCATTTG 57.111 33.333 0.00 0.00 0.00 2.32
7672 19311 7.175641 GCCTTTTCTATGCCATATACACTCATT 59.824 37.037 0.00 0.00 0.00 2.57
7673 19312 6.656693 GCCTTTTCTATGCCATATACACTCAT 59.343 38.462 0.00 0.00 0.00 2.90
7674 19313 5.997746 GCCTTTTCTATGCCATATACACTCA 59.002 40.000 0.00 0.00 0.00 3.41
7675 19314 6.234177 AGCCTTTTCTATGCCATATACACTC 58.766 40.000 0.00 0.00 0.00 3.51
7676 19315 6.192970 AGCCTTTTCTATGCCATATACACT 57.807 37.500 0.00 0.00 0.00 3.55
7677 19316 6.595716 CCTAGCCTTTTCTATGCCATATACAC 59.404 42.308 0.00 0.00 0.00 2.90
7680 19319 7.402941 TCATCCTAGCCTTTTCTATGCCATATA 59.597 37.037 0.00 0.00 0.00 0.86
7681 19320 6.216251 TCATCCTAGCCTTTTCTATGCCATAT 59.784 38.462 0.00 0.00 0.00 1.78
7682 19321 5.547666 TCATCCTAGCCTTTTCTATGCCATA 59.452 40.000 0.00 0.00 0.00 2.74
7683 19322 4.352001 TCATCCTAGCCTTTTCTATGCCAT 59.648 41.667 0.00 0.00 0.00 4.40
7684 19323 3.716353 TCATCCTAGCCTTTTCTATGCCA 59.284 43.478 0.00 0.00 0.00 4.92
7685 19324 4.357918 TCATCCTAGCCTTTTCTATGCC 57.642 45.455 0.00 0.00 0.00 4.40
7687 19326 7.002250 TCTGATCATCCTAGCCTTTTCTATG 57.998 40.000 0.00 0.00 0.00 2.23
7688 19327 7.015680 TCTCTGATCATCCTAGCCTTTTCTAT 58.984 38.462 0.00 0.00 0.00 1.98
7689 19328 6.266558 GTCTCTGATCATCCTAGCCTTTTCTA 59.733 42.308 0.00 0.00 0.00 2.10
7692 19331 4.202202 CGTCTCTGATCATCCTAGCCTTTT 60.202 45.833 0.00 0.00 0.00 2.27
7693 19332 3.320541 CGTCTCTGATCATCCTAGCCTTT 59.679 47.826 0.00 0.00 0.00 3.11
7696 19335 1.067915 GCGTCTCTGATCATCCTAGCC 60.068 57.143 0.00 0.00 0.00 3.93
7698 19337 1.198867 CGGCGTCTCTGATCATCCTAG 59.801 57.143 0.00 0.00 0.00 3.02
7699 19338 1.239347 CGGCGTCTCTGATCATCCTA 58.761 55.000 0.00 0.00 0.00 2.94
7700 19339 1.459455 CCGGCGTCTCTGATCATCCT 61.459 60.000 6.01 0.00 0.00 3.24
7701 19340 1.006805 CCGGCGTCTCTGATCATCC 60.007 63.158 6.01 0.00 0.00 3.51
7703 19342 1.736586 GTCCGGCGTCTCTGATCAT 59.263 57.895 6.01 0.00 0.00 2.45
7704 19343 2.761195 CGTCCGGCGTCTCTGATCA 61.761 63.158 6.01 0.00 35.54 2.92
7707 19346 0.745486 TAATCGTCCGGCGTCTCTGA 60.745 55.000 16.00 0.00 42.13 3.27
7708 19347 0.317103 CTAATCGTCCGGCGTCTCTG 60.317 60.000 16.00 0.00 42.13 3.35
7709 19348 0.747283 ACTAATCGTCCGGCGTCTCT 60.747 55.000 16.00 4.54 42.13 3.10
7710 19349 0.940126 TACTAATCGTCCGGCGTCTC 59.060 55.000 16.00 0.00 42.13 3.36
7712 19351 2.727298 GCTATACTAATCGTCCGGCGTC 60.727 54.545 16.00 0.00 42.13 5.19
7713 19352 1.198637 GCTATACTAATCGTCCGGCGT 59.801 52.381 16.00 3.10 42.13 5.68
7715 19354 3.293311 TTGCTATACTAATCGTCCGGC 57.707 47.619 0.00 0.00 0.00 6.13
7717 19356 6.090783 TGCTAATTGCTATACTAATCGTCCG 58.909 40.000 0.00 0.00 43.37 4.79
7718 19357 7.313646 TCTGCTAATTGCTATACTAATCGTCC 58.686 38.462 0.00 0.00 43.37 4.79
7719 19358 8.918961 ATCTGCTAATTGCTATACTAATCGTC 57.081 34.615 0.00 0.00 43.37 4.20
7731 19370 9.838339 AATACACTTACTTATCTGCTAATTGCT 57.162 29.630 0.00 0.00 43.37 3.91
7750 19389 8.585018 CCAAGAGGAAAATTTACCAAATACACT 58.415 33.333 0.00 0.00 36.89 3.55
7751 19390 8.581578 TCCAAGAGGAAAATTTACCAAATACAC 58.418 33.333 0.00 0.00 42.23 2.90
7784 21640 4.759205 ACAATTCCGGGCCCTGGC 62.759 66.667 22.43 0.00 41.06 4.85
7785 21641 2.440247 GACAATTCCGGGCCCTGG 60.440 66.667 22.43 22.45 0.00 4.45
7786 21642 2.440247 GGACAATTCCGGGCCCTG 60.440 66.667 22.43 14.86 29.98 4.45
7789 21645 4.055227 TGGGGACAATTCCGGGCC 62.055 66.667 0.00 0.00 43.94 5.80
7790 21646 1.917336 TAGTGGGGACAATTCCGGGC 61.917 60.000 0.00 0.00 46.06 6.13
7792 21648 0.461339 CGTAGTGGGGACAATTCCGG 60.461 60.000 0.00 0.00 46.06 5.14
7793 21649 1.087771 GCGTAGTGGGGACAATTCCG 61.088 60.000 0.00 0.00 46.06 4.30
7794 21650 0.252197 AGCGTAGTGGGGACAATTCC 59.748 55.000 0.00 0.00 46.06 3.01
7795 21651 1.207329 AGAGCGTAGTGGGGACAATTC 59.793 52.381 0.00 0.00 46.06 2.17
7796 21652 1.276622 AGAGCGTAGTGGGGACAATT 58.723 50.000 0.00 0.00 46.06 2.32
7797 21653 2.154567 TAGAGCGTAGTGGGGACAAT 57.845 50.000 0.00 0.00 46.06 2.71
7798 21654 1.754803 CATAGAGCGTAGTGGGGACAA 59.245 52.381 0.00 0.00 46.06 3.18
7800 21656 0.674534 CCATAGAGCGTAGTGGGGAC 59.325 60.000 0.00 0.00 0.00 4.46
7802 21658 0.674534 GTCCATAGAGCGTAGTGGGG 59.325 60.000 0.00 0.00 32.58 4.96
7803 21659 0.311165 CGTCCATAGAGCGTAGTGGG 59.689 60.000 0.00 0.00 32.58 4.61
7804 21660 0.317938 GCGTCCATAGAGCGTAGTGG 60.318 60.000 0.00 0.00 0.00 4.00
7808 21664 1.957668 TAGTGCGTCCATAGAGCGTA 58.042 50.000 0.00 0.00 0.00 4.42
7809 21665 1.001268 CATAGTGCGTCCATAGAGCGT 60.001 52.381 0.00 0.00 0.00 5.07
7810 21666 1.001268 ACATAGTGCGTCCATAGAGCG 60.001 52.381 0.00 0.00 0.00 5.03
7811 21667 2.398498 CACATAGTGCGTCCATAGAGC 58.602 52.381 0.00 0.00 0.00 4.09
7825 21681 2.109799 CCCGAGGGCAGCACATAG 59.890 66.667 0.00 0.00 0.00 2.23
7835 21691 4.609018 CCATAGTGCGCCCGAGGG 62.609 72.222 4.18 3.22 38.57 4.30
7836 21692 2.383245 AATCCATAGTGCGCCCGAGG 62.383 60.000 4.18 0.04 0.00 4.63
7837 21693 0.532862 AAATCCATAGTGCGCCCGAG 60.533 55.000 4.18 0.00 0.00 4.63
7838 21694 0.813610 CAAATCCATAGTGCGCCCGA 60.814 55.000 4.18 0.00 0.00 5.14
7839 21695 1.095228 ACAAATCCATAGTGCGCCCG 61.095 55.000 4.18 0.00 0.00 6.13
7840 21696 1.102978 AACAAATCCATAGTGCGCCC 58.897 50.000 4.18 0.00 0.00 6.13
7841 21697 1.798813 GCAACAAATCCATAGTGCGCC 60.799 52.381 4.18 0.00 0.00 6.53
7842 21698 1.548986 GCAACAAATCCATAGTGCGC 58.451 50.000 0.00 0.00 0.00 6.09
7843 21699 1.531677 CCGCAACAAATCCATAGTGCG 60.532 52.381 8.75 8.75 43.05 5.34
7844 21700 1.798813 GCCGCAACAAATCCATAGTGC 60.799 52.381 0.00 0.00 0.00 4.40
7845 21701 1.531677 CGCCGCAACAAATCCATAGTG 60.532 52.381 0.00 0.00 0.00 2.74
7846 21702 0.732571 CGCCGCAACAAATCCATAGT 59.267 50.000 0.00 0.00 0.00 2.12
7848 21704 1.333308 CATCGCCGCAACAAATCCATA 59.667 47.619 0.00 0.00 0.00 2.74
7850 21706 1.240641 ACATCGCCGCAACAAATCCA 61.241 50.000 0.00 0.00 0.00 3.41
7851 21707 0.523335 GACATCGCCGCAACAAATCC 60.523 55.000 0.00 0.00 0.00 3.01
7852 21708 0.523335 GGACATCGCCGCAACAAATC 60.523 55.000 0.00 0.00 0.00 2.17
7853 21709 1.506262 GGACATCGCCGCAACAAAT 59.494 52.632 0.00 0.00 0.00 2.32
7854 21710 2.950673 GGACATCGCCGCAACAAA 59.049 55.556 0.00 0.00 0.00 2.83
7865 21721 2.750237 AAAAGCGGGGCGGACATC 60.750 61.111 0.00 0.00 0.00 3.06
7866 21722 3.061848 CAAAAGCGGGGCGGACAT 61.062 61.111 0.00 0.00 0.00 3.06
7868 21724 3.292159 AACAAAAGCGGGGCGGAC 61.292 61.111 0.00 0.00 0.00 4.79
7869 21725 3.291383 CAACAAAAGCGGGGCGGA 61.291 61.111 0.00 0.00 0.00 5.54
7870 21726 4.356442 CCAACAAAAGCGGGGCGG 62.356 66.667 0.00 0.00 0.00 6.13
7871 21727 4.356442 CCCAACAAAAGCGGGGCG 62.356 66.667 0.00 0.00 36.21 6.13
7873 21729 1.524008 GAGACCCAACAAAAGCGGGG 61.524 60.000 0.00 0.00 44.96 5.73
7874 21730 0.537371 AGAGACCCAACAAAAGCGGG 60.537 55.000 0.00 0.00 46.22 6.13
7875 21731 0.593128 CAGAGACCCAACAAAAGCGG 59.407 55.000 0.00 0.00 0.00 5.52
7876 21732 1.002468 CACAGAGACCCAACAAAAGCG 60.002 52.381 0.00 0.00 0.00 4.68
7877 21733 1.269257 GCACAGAGACCCAACAAAAGC 60.269 52.381 0.00 0.00 0.00 3.51
7878 21734 1.338020 GGCACAGAGACCCAACAAAAG 59.662 52.381 0.00 0.00 0.00 2.27
7880 21736 0.467290 GGGCACAGAGACCCAACAAA 60.467 55.000 0.00 0.00 46.22 2.83
7882 21738 2.836154 GGGCACAGAGACCCAACA 59.164 61.111 0.00 0.00 46.22 3.33
7888 21744 2.217038 TCACCAGGGGCACAGAGAC 61.217 63.158 0.00 0.00 0.00 3.36
7890 21746 2.348998 GTCACCAGGGGCACAGAG 59.651 66.667 0.00 0.00 0.00 3.35
7891 21747 3.249189 GGTCACCAGGGGCACAGA 61.249 66.667 0.00 0.00 0.00 3.41
7892 21748 2.910737 ATGGTCACCAGGGGCACAG 61.911 63.158 1.19 0.00 36.75 3.66
7894 21750 2.361610 CATGGTCACCAGGGGCAC 60.362 66.667 1.19 0.00 36.75 5.01
7896 21752 2.142292 AACTCATGGTCACCAGGGGC 62.142 60.000 8.73 0.00 39.72 5.80
7897 21753 0.322816 CAACTCATGGTCACCAGGGG 60.323 60.000 6.87 6.87 42.11 4.79
7898 21754 0.322816 CCAACTCATGGTCACCAGGG 60.323 60.000 9.03 1.85 44.85 4.45
7899 21755 3.254629 CCAACTCATGGTCACCAGG 57.745 57.895 0.63 0.63 44.85 4.45
7908 21764 1.069204 ACCGATCCGATCCAACTCATG 59.931 52.381 2.69 0.00 0.00 3.07
7909 21765 1.414158 ACCGATCCGATCCAACTCAT 58.586 50.000 2.69 0.00 0.00 2.90
7910 21766 2.061509 TACCGATCCGATCCAACTCA 57.938 50.000 2.69 0.00 0.00 3.41
7913 21769 3.005472 TCATCTTACCGATCCGATCCAAC 59.995 47.826 2.69 0.00 0.00 3.77
7914 21770 3.227614 TCATCTTACCGATCCGATCCAA 58.772 45.455 2.69 0.00 0.00 3.53
7916 21772 3.193691 ACATCATCTTACCGATCCGATCC 59.806 47.826 2.69 0.00 0.00 3.36
7917 21773 4.442375 ACATCATCTTACCGATCCGATC 57.558 45.455 0.00 0.00 0.00 3.69
7918 21774 4.399618 CCTACATCATCTTACCGATCCGAT 59.600 45.833 0.00 0.00 0.00 4.18
7919 21775 3.756963 CCTACATCATCTTACCGATCCGA 59.243 47.826 0.00 0.00 0.00 4.55
7921 21777 3.195825 CCCCTACATCATCTTACCGATCC 59.804 52.174 0.00 0.00 0.00 3.36
7922 21778 3.195825 CCCCCTACATCATCTTACCGATC 59.804 52.174 0.00 0.00 0.00 3.69
7952 21808 4.408821 TCTGTCCACCATGCCGGC 62.409 66.667 22.73 22.73 39.03 6.13
7954 21810 1.448540 GACTCTGTCCACCATGCCG 60.449 63.158 0.00 0.00 0.00 5.69
7955 21811 4.625800 GACTCTGTCCACCATGCC 57.374 61.111 0.00 0.00 0.00 4.40
7967 21823 1.906990 TTTCGTCGGAGAAGGACTCT 58.093 50.000 0.00 0.00 44.37 3.24
7968 21824 2.326664 GTTTTCGTCGGAGAAGGACTC 58.673 52.381 0.00 0.00 44.24 3.36
7970 21826 1.426423 GGTTTTCGTCGGAGAAGGAC 58.574 55.000 0.00 0.00 39.69 3.85
7971 21827 0.319405 GGGTTTTCGTCGGAGAAGGA 59.681 55.000 0.00 0.00 39.69 3.36
7972 21828 0.320697 AGGGTTTTCGTCGGAGAAGG 59.679 55.000 0.00 0.00 39.69 3.46
7973 21829 2.603953 GTAGGGTTTTCGTCGGAGAAG 58.396 52.381 0.00 0.00 39.69 2.85
7975 21831 0.523072 CGTAGGGTTTTCGTCGGAGA 59.477 55.000 0.00 0.00 0.00 3.71
7976 21832 1.074872 GCGTAGGGTTTTCGTCGGAG 61.075 60.000 0.00 0.00 0.00 4.63
7977 21833 1.080569 GCGTAGGGTTTTCGTCGGA 60.081 57.895 0.00 0.00 0.00 4.55
7978 21834 2.096442 GGCGTAGGGTTTTCGTCGG 61.096 63.158 0.00 0.00 0.00 4.79
7980 21836 1.073964 GAAGGCGTAGGGTTTTCGTC 58.926 55.000 0.00 0.00 0.00 4.20
7981 21837 0.321034 GGAAGGCGTAGGGTTTTCGT 60.321 55.000 0.00 0.00 0.00 3.85
7983 21839 0.037160 TGGGAAGGCGTAGGGTTTTC 59.963 55.000 0.00 0.00 0.00 2.29
7984 21840 0.251033 GTGGGAAGGCGTAGGGTTTT 60.251 55.000 0.00 0.00 0.00 2.43
7987 21843 1.838073 CTTGTGGGAAGGCGTAGGGT 61.838 60.000 0.00 0.00 0.00 4.34
7988 21844 1.078426 CTTGTGGGAAGGCGTAGGG 60.078 63.158 0.00 0.00 0.00 3.53
7989 21845 1.078426 CCTTGTGGGAAGGCGTAGG 60.078 63.158 0.00 0.00 37.23 3.18
7990 21846 1.980052 TCCTTGTGGGAAGGCGTAG 59.020 57.895 0.00 0.00 41.91 3.51
7991 21847 4.218856 TCCTTGTGGGAAGGCGTA 57.781 55.556 0.00 0.00 41.91 4.42
8001 21857 1.502231 CTCGTGTCTGGTTCCTTGTG 58.498 55.000 0.00 0.00 0.00 3.33
8002 21858 0.393077 CCTCGTGTCTGGTTCCTTGT 59.607 55.000 0.00 0.00 0.00 3.16
8003 21859 0.320771 CCCTCGTGTCTGGTTCCTTG 60.321 60.000 0.00 0.00 0.00 3.61
8004 21860 2.058675 CCCTCGTGTCTGGTTCCTT 58.941 57.895 0.00 0.00 0.00 3.36
8005 21861 2.584391 GCCCTCGTGTCTGGTTCCT 61.584 63.158 0.00 0.00 0.00 3.36
8006 21862 2.047179 GCCCTCGTGTCTGGTTCC 60.047 66.667 0.00 0.00 0.00 3.62
8008 21864 2.526873 AGGCCCTCGTGTCTGGTT 60.527 61.111 0.00 0.00 0.00 3.67
8009 21865 2.997897 GAGGCCCTCGTGTCTGGT 60.998 66.667 0.00 0.00 0.00 4.00
8022 21878 2.611518 GATGTCTGTATATGGCGAGGC 58.388 52.381 0.00 0.00 0.00 4.70
8023 21879 2.416027 CCGATGTCTGTATATGGCGAGG 60.416 54.545 0.00 0.00 0.00 4.63
8024 21880 2.416027 CCCGATGTCTGTATATGGCGAG 60.416 54.545 0.00 0.00 0.00 5.03
8025 21881 1.544246 CCCGATGTCTGTATATGGCGA 59.456 52.381 0.00 0.00 0.00 5.54
8026 21882 1.404181 CCCCGATGTCTGTATATGGCG 60.404 57.143 0.00 0.00 0.00 5.69
8027 21883 1.899814 TCCCCGATGTCTGTATATGGC 59.100 52.381 0.00 0.00 0.00 4.40
8028 21884 2.094700 CGTCCCCGATGTCTGTATATGG 60.095 54.545 0.00 0.00 35.63 2.74
8029 21885 2.094700 CCGTCCCCGATGTCTGTATATG 60.095 54.545 0.00 0.00 35.63 1.78
8030 21886 2.168496 CCGTCCCCGATGTCTGTATAT 58.832 52.381 0.00 0.00 35.63 0.86
8032 21888 1.113517 CCCGTCCCCGATGTCTGTAT 61.114 60.000 0.00 0.00 35.63 2.29
8033 21889 1.755395 CCCGTCCCCGATGTCTGTA 60.755 63.158 0.00 0.00 35.63 2.74
8034 21890 3.075005 CCCGTCCCCGATGTCTGT 61.075 66.667 0.00 0.00 35.63 3.41
8035 21891 3.849951 CCCCGTCCCCGATGTCTG 61.850 72.222 0.00 0.00 35.63 3.51
8044 21900 4.489771 CACCATGAGCCCCGTCCC 62.490 72.222 0.00 0.00 0.00 4.46
8045 21901 4.489771 CCACCATGAGCCCCGTCC 62.490 72.222 0.00 0.00 0.00 4.79
8046 21902 2.966732 TTCCACCATGAGCCCCGTC 61.967 63.158 0.00 0.00 0.00 4.79
8048 21904 2.438434 GTTCCACCATGAGCCCCG 60.438 66.667 0.00 0.00 0.00 5.73
8049 21905 2.438434 CGTTCCACCATGAGCCCC 60.438 66.667 0.00 0.00 0.00 5.80
8050 21906 3.134127 GCGTTCCACCATGAGCCC 61.134 66.667 0.00 0.00 0.00 5.19
8051 21907 2.359850 TGCGTTCCACCATGAGCC 60.360 61.111 0.00 0.00 0.00 4.70
8052 21908 2.870372 GTGCGTTCCACCATGAGC 59.130 61.111 0.00 0.00 38.55 4.26
8060 21916 1.243902 GAAATTCAGGGTGCGTTCCA 58.756 50.000 0.00 0.00 0.00 3.53
8061 21917 0.168128 CGAAATTCAGGGTGCGTTCC 59.832 55.000 0.00 0.00 0.00 3.62
8065 21921 1.062587 GATGACGAAATTCAGGGTGCG 59.937 52.381 0.00 0.00 0.00 5.34
8066 21922 2.359900 AGATGACGAAATTCAGGGTGC 58.640 47.619 0.00 0.00 0.00 5.01
8067 21923 3.753272 ACAAGATGACGAAATTCAGGGTG 59.247 43.478 0.00 0.00 0.00 4.61
8068 21924 4.021102 ACAAGATGACGAAATTCAGGGT 57.979 40.909 0.00 0.00 0.00 4.34
8069 21925 5.292101 GTCTACAAGATGACGAAATTCAGGG 59.708 44.000 0.00 0.00 0.00 4.45
8070 21926 5.292101 GGTCTACAAGATGACGAAATTCAGG 59.708 44.000 0.00 0.00 34.31 3.86
8071 21927 5.869344 TGGTCTACAAGATGACGAAATTCAG 59.131 40.000 0.00 0.00 34.31 3.02
8072 21928 5.637810 GTGGTCTACAAGATGACGAAATTCA 59.362 40.000 0.00 0.00 34.31 2.57
8073 21929 5.637810 TGTGGTCTACAAGATGACGAAATTC 59.362 40.000 0.00 0.00 36.06 2.17
8075 21931 4.929808 GTGTGGTCTACAAGATGACGAAAT 59.070 41.667 0.00 0.00 41.89 2.17
8076 21932 4.202172 TGTGTGGTCTACAAGATGACGAAA 60.202 41.667 0.00 0.00 41.89 3.46
8077 21933 3.319689 TGTGTGGTCTACAAGATGACGAA 59.680 43.478 0.00 0.00 41.89 3.85
8078 21934 2.888414 TGTGTGGTCTACAAGATGACGA 59.112 45.455 0.00 0.00 41.89 4.20
8079 21935 3.297830 TGTGTGGTCTACAAGATGACG 57.702 47.619 0.00 0.00 41.89 4.35
8080 21936 4.083802 GCTTTGTGTGGTCTACAAGATGAC 60.084 45.833 0.00 0.00 41.89 3.06
8082 21938 4.067896 AGCTTTGTGTGGTCTACAAGATG 58.932 43.478 0.00 0.00 41.89 2.90
8083 21939 4.357918 AGCTTTGTGTGGTCTACAAGAT 57.642 40.909 0.00 0.00 41.89 2.40
8084 21940 3.838244 AGCTTTGTGTGGTCTACAAGA 57.162 42.857 0.00 0.00 41.89 3.02
8085 21941 4.377021 TGTAGCTTTGTGTGGTCTACAAG 58.623 43.478 0.00 0.00 41.89 3.16
8086 21942 4.409718 TGTAGCTTTGTGTGGTCTACAA 57.590 40.909 0.00 0.00 41.89 2.41
8087 21943 4.377021 CTTGTAGCTTTGTGTGGTCTACA 58.623 43.478 0.00 0.00 38.16 2.74
8089 21945 3.399330 GCTTGTAGCTTTGTGTGGTCTA 58.601 45.455 0.00 0.00 38.45 2.59
8091 21947 1.266989 GGCTTGTAGCTTTGTGTGGTC 59.733 52.381 0.00 0.00 41.99 4.02
8094 21950 1.069906 GTCGGCTTGTAGCTTTGTGTG 60.070 52.381 0.00 0.00 41.99 3.82
8095 21951 1.226746 GTCGGCTTGTAGCTTTGTGT 58.773 50.000 0.00 0.00 41.99 3.72
8096 21952 0.163788 CGTCGGCTTGTAGCTTTGTG 59.836 55.000 0.00 0.00 41.99 3.33
8097 21953 1.566018 GCGTCGGCTTGTAGCTTTGT 61.566 55.000 0.00 0.00 41.99 2.83
8098 21954 1.132640 GCGTCGGCTTGTAGCTTTG 59.867 57.895 0.00 0.00 41.99 2.77
8110 21966 4.111016 TGCAGGTCGTAGCGTCGG 62.111 66.667 0.00 0.00 0.00 4.79
8111 21967 2.577112 CTGCAGGTCGTAGCGTCG 60.577 66.667 5.57 0.00 0.00 5.12
8112 21968 2.881352 GCTGCAGGTCGTAGCGTC 60.881 66.667 17.12 0.00 43.77 5.19
8118 21974 2.029288 CGACATTGCTGCAGGTCGT 61.029 57.895 32.33 18.01 45.73 4.34
8119 21975 2.780643 CGACATTGCTGCAGGTCG 59.219 61.111 30.22 30.22 45.62 4.79
8120 21976 1.790387 GTCGACATTGCTGCAGGTC 59.210 57.895 17.12 20.10 0.00 3.85
8121 21977 2.029288 CGTCGACATTGCTGCAGGT 61.029 57.895 17.12 4.19 0.00 4.00
8122 21978 1.959899 GACGTCGACATTGCTGCAGG 61.960 60.000 17.12 0.31 0.00 4.85
8123 21979 1.010935 AGACGTCGACATTGCTGCAG 61.011 55.000 17.16 10.11 0.00 4.41
8124 21980 1.006220 AGACGTCGACATTGCTGCA 60.006 52.632 17.16 0.00 0.00 4.41
8125 21981 1.417592 CAGACGTCGACATTGCTGC 59.582 57.895 17.16 0.00 0.00 5.25
8127 21983 3.862124 GCAGACGTCGACATTGCT 58.138 55.556 21.63 8.99 0.00 3.91


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.