Multiple sequence alignment - TraesCS5D01G039700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G039700 chr5D 100.000 4479 0 0 1 4479 40924282 40919804 0.000000e+00 8272.0
1 TraesCS5D01G039700 chr5D 89.377 1751 139 20 776 2502 40715745 40717472 0.000000e+00 2159.0
2 TraesCS5D01G039700 chr5D 78.266 1661 257 55 749 2362 40914976 40916579 0.000000e+00 972.0
3 TraesCS5D01G039700 chr5D 98.730 315 4 0 350 664 555465783 555466097 1.090000e-155 560.0
4 TraesCS5D01G039700 chr5D 98.131 321 4 2 350 668 62095856 62095536 3.910000e-155 558.0
5 TraesCS5D01G039700 chr5D 84.559 272 23 8 2675 2940 40717911 40718169 7.440000e-63 252.0
6 TraesCS5D01G039700 chr5D 80.216 278 28 11 4073 4348 40720676 40720928 2.750000e-42 183.0
7 TraesCS5D01G039700 chr5D 91.000 100 7 2 1 100 410056346 410056443 2.810000e-27 134.0
8 TraesCS5D01G039700 chr5D 85.185 81 7 5 4378 4457 517281622 517281546 1.340000e-10 78.7
9 TraesCS5D01G039700 chr5D 86.111 72 8 2 4389 4460 40181412 40181343 4.800000e-10 76.8
10 TraesCS5D01G039700 chr5B 93.716 1846 100 8 663 2502 34768483 34766648 0.000000e+00 2752.0
11 TraesCS5D01G039700 chr5B 90.104 1728 130 22 776 2486 34249682 34251385 0.000000e+00 2206.0
12 TraesCS5D01G039700 chr5B 88.953 1729 148 26 781 2502 34038672 34040364 0.000000e+00 2095.0
13 TraesCS5D01G039700 chr5B 94.899 1039 43 4 2513 3548 34766147 34765116 0.000000e+00 1616.0
14 TraesCS5D01G039700 chr5B 78.096 1607 246 56 749 2299 34742665 34744221 0.000000e+00 920.0
15 TraesCS5D01G039700 chr5B 82.872 940 108 20 3069 3969 34041303 34042228 0.000000e+00 795.0
16 TraesCS5D01G039700 chr5B 82.824 687 83 15 3069 3727 34252288 34252967 2.320000e-162 582.0
17 TraesCS5D01G039700 chr5B 93.939 363 20 2 2142 2502 34766644 34766282 8.470000e-152 547.0
18 TraesCS5D01G039700 chr5B 78.859 596 101 14 1062 1641 34726547 34727133 3.270000e-101 379.0
19 TraesCS5D01G039700 chr5B 80.977 389 54 8 2559 2940 34251685 34252060 1.580000e-74 291.0
20 TraesCS5D01G039700 chr5B 94.048 168 4 1 4318 4479 34747619 34747452 2.680000e-62 250.0
21 TraesCS5D01G039700 chr5B 83.969 262 23 10 2679 2940 34040806 34041048 2.690000e-57 233.0
22 TraesCS5D01G039700 chr5B 96.429 140 4 1 162 301 34768653 34768515 3.480000e-56 230.0
23 TraesCS5D01G039700 chr5B 81.655 278 24 10 4073 4348 34253435 34253687 5.870000e-49 206.0
24 TraesCS5D01G039700 chr5B 90.625 96 9 0 4128 4223 34764401 34764306 1.310000e-25 128.0
25 TraesCS5D01G039700 chr5B 96.364 55 1 1 246 299 34038592 34038646 6.170000e-14 89.8
26 TraesCS5D01G039700 chr5A 89.357 1757 131 23 776 2502 28697311 28699041 0.000000e+00 2158.0
27 TraesCS5D01G039700 chr5A 95.427 1006 42 2 1497 2502 29125915 29124914 0.000000e+00 1600.0
28 TraesCS5D01G039700 chr5A 93.449 977 42 9 2509 3480 29124782 29123823 0.000000e+00 1430.0
29 TraesCS5D01G039700 chr5A 91.632 717 39 7 664 1375 29126625 29125925 0.000000e+00 972.0
30 TraesCS5D01G039700 chr5A 94.726 474 19 4 4009 4479 29123265 29122795 0.000000e+00 732.0
31 TraesCS5D01G039700 chr5A 83.601 622 81 9 3069 3673 28699941 28700558 8.410000e-157 564.0
32 TraesCS5D01G039700 chr5A 79.450 618 100 22 749 1350 29118292 29118898 3.220000e-111 412.0
33 TraesCS5D01G039700 chr5A 91.259 286 13 3 3693 3969 29123823 29123541 3.270000e-101 379.0
34 TraesCS5D01G039700 chr5A 88.439 173 17 2 2675 2847 28699495 28699664 5.870000e-49 206.0
35 TraesCS5D01G039700 chr5A 94.545 110 1 1 246 350 29126735 29126626 9.970000e-37 165.0
36 TraesCS5D01G039700 chr5A 77.978 277 27 13 4073 4345 28702183 28702429 4.670000e-30 143.0
37 TraesCS5D01G039700 chr5A 89.189 111 9 3 1 110 451882028 451881920 7.820000e-28 135.0
38 TraesCS5D01G039700 chr5A 90.099 101 9 1 1 100 261912753 261912653 3.640000e-26 130.0
39 TraesCS5D01G039700 chr5A 82.394 142 11 5 3419 3548 28701034 28701173 1.320000e-20 111.0
40 TraesCS5D01G039700 chr5A 84.536 97 7 8 4378 4472 644359798 644359708 6.170000e-14 89.8
41 TraesCS5D01G039700 chr5A 94.000 50 0 3 3961 4007 29123529 29123480 6.210000e-09 73.1
42 TraesCS5D01G039700 chr3B 92.710 727 47 4 2508 3232 754379680 754380402 0.000000e+00 1044.0
43 TraesCS5D01G039700 chr3B 90.704 398 30 2 2035 2431 754378574 754378965 1.430000e-144 523.0
44 TraesCS5D01G039700 chr3B 93.137 102 6 1 1 101 538815945 538815844 1.000000e-31 148.0
45 TraesCS5D01G039700 chr3B 83.516 91 12 3 2978 3066 126580057 126580146 1.030000e-11 82.4
46 TraesCS5D01G039700 chr3B 82.022 89 13 3 2986 3072 621148619 621148532 6.210000e-09 73.1
47 TraesCS5D01G039700 chr4B 77.764 1619 252 63 741 2299 628579195 628577625 0.000000e+00 896.0
48 TraesCS5D01G039700 chr7D 98.142 323 4 2 350 670 400893582 400893260 3.030000e-156 562.0
49 TraesCS5D01G039700 chr7D 98.418 316 5 0 352 667 482121342 482121657 1.410000e-154 556.0
50 TraesCS5D01G039700 chr7D 98.119 319 5 1 350 667 281426793 281427111 5.060000e-154 555.0
51 TraesCS5D01G039700 chr7D 87.059 85 6 5 4378 4460 48362730 48362649 1.720000e-14 91.6
52 TraesCS5D01G039700 chr7D 84.884 86 7 6 4378 4461 603338028 603338109 1.030000e-11 82.4
53 TraesCS5D01G039700 chr4D 98.726 314 4 0 350 663 228107076 228107389 3.910000e-155 558.0
54 TraesCS5D01G039700 chr4D 91.346 104 8 1 1 103 114579057 114578954 1.680000e-29 141.0
55 TraesCS5D01G039700 chr3D 98.428 318 4 1 350 666 565409615 565409932 3.910000e-155 558.0
56 TraesCS5D01G039700 chr6D 98.726 314 3 1 350 662 40836495 40836182 1.410000e-154 556.0
57 TraesCS5D01G039700 chr6D 81.818 88 12 4 2986 3070 166762488 166762402 2.240000e-08 71.3
58 TraesCS5D01G039700 chr2D 98.726 314 3 1 350 662 24923167 24923480 1.410000e-154 556.0
59 TraesCS5D01G039700 chr2D 83.516 91 9 5 2986 3073 402236328 402236241 3.710000e-11 80.5
60 TraesCS5D01G039700 chr3A 90.476 105 9 1 2 105 179503103 179503207 2.170000e-28 137.0
61 TraesCS5D01G039700 chr1B 89.286 112 9 3 1 111 518263923 518264032 2.170000e-28 137.0
62 TraesCS5D01G039700 chr7A 91.837 98 6 2 4 100 126587241 126587145 7.820000e-28 135.0
63 TraesCS5D01G039700 chr7A 88.785 107 10 2 1 105 719747086 719746980 3.640000e-26 130.0
64 TraesCS5D01G039700 chr2B 87.654 81 6 3 2986 3064 476461803 476461881 1.720000e-14 91.6
65 TraesCS5D01G039700 chr1A 90.625 64 6 0 4010 4073 556445207 556445270 7.980000e-13 86.1
66 TraesCS5D01G039700 chr1A 83.133 83 12 2 4378 4460 403631804 403631724 1.730000e-09 75.0
67 TraesCS5D01G039700 chr6A 83.146 89 12 3 2986 3072 256482123 256482210 1.340000e-10 78.7
68 TraesCS5D01G039700 chr6A 81.818 88 13 3 2986 3072 66388162 66388077 2.240000e-08 71.3
69 TraesCS5D01G039700 chr6B 85.135 74 7 4 4389 4460 15221921 15221992 6.210000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G039700 chr5D 40919804 40924282 4478 True 8272.000000 8272 100.000000 1 4479 1 chr5D.!!$R2 4478
1 TraesCS5D01G039700 chr5D 40914976 40916579 1603 False 972.000000 972 78.266000 749 2362 1 chr5D.!!$F1 1613
2 TraesCS5D01G039700 chr5D 40715745 40720928 5183 False 864.666667 2159 84.717333 776 4348 3 chr5D.!!$F4 3572
3 TraesCS5D01G039700 chr5B 34764306 34768653 4347 True 1054.600000 2752 93.921600 162 4223 5 chr5B.!!$R2 4061
4 TraesCS5D01G039700 chr5B 34742665 34744221 1556 False 920.000000 920 78.096000 749 2299 1 chr5B.!!$F2 1550
5 TraesCS5D01G039700 chr5B 34249682 34253687 4005 False 821.250000 2206 83.890000 776 4348 4 chr5B.!!$F4 3572
6 TraesCS5D01G039700 chr5B 34038592 34042228 3636 False 803.200000 2095 88.039500 246 3969 4 chr5B.!!$F3 3723
7 TraesCS5D01G039700 chr5B 34726547 34727133 586 False 379.000000 379 78.859000 1062 1641 1 chr5B.!!$F1 579
8 TraesCS5D01G039700 chr5A 29122795 29126735 3940 True 764.442857 1600 93.576857 246 4479 7 chr5A.!!$R4 4233
9 TraesCS5D01G039700 chr5A 28697311 28702429 5118 False 636.400000 2158 84.353800 776 4345 5 chr5A.!!$F2 3569
10 TraesCS5D01G039700 chr5A 29118292 29118898 606 False 412.000000 412 79.450000 749 1350 1 chr5A.!!$F1 601
11 TraesCS5D01G039700 chr3B 754378574 754380402 1828 False 783.500000 1044 91.707000 2035 3232 2 chr3B.!!$F2 1197
12 TraesCS5D01G039700 chr4B 628577625 628579195 1570 True 896.000000 896 77.764000 741 2299 1 chr4B.!!$R1 1558

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
638 646 0.031111 ACTCCCATTCCCCATCTCGA 60.031 55.0 0.0 0.0 0.00 4.04 F
653 661 0.035820 CTCGAATTCCCCCGAACCAA 60.036 55.0 0.0 0.0 34.17 3.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2606 3867 0.745845 ACCGCAGATCACATGAAGCC 60.746 55.0 0.0 0.0 0.0 4.35 R
3644 5427 0.671472 CACGCATCTGACCAGCAAGA 60.671 55.0 0.0 0.0 0.0 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
62 63 9.868277 AAACTTCATAAATTTTGACTTGACACA 57.132 25.926 0.00 0.00 0.00 3.72
63 64 9.868277 AACTTCATAAATTTTGACTTGACACAA 57.132 25.926 0.00 0.00 0.00 3.33
64 65 9.868277 ACTTCATAAATTTTGACTTGACACAAA 57.132 25.926 0.00 0.00 34.80 2.83
73 74 9.825972 ATTTTGACTTGACACAAATCTAATACG 57.174 29.630 0.00 0.00 36.21 3.06
74 75 6.403333 TGACTTGACACAAATCTAATACGC 57.597 37.500 0.00 0.00 0.00 4.42
75 76 5.061684 TGACTTGACACAAATCTAATACGCG 59.938 40.000 3.53 3.53 0.00 6.01
76 77 5.165676 ACTTGACACAAATCTAATACGCGA 58.834 37.500 15.93 0.00 0.00 5.87
77 78 5.636121 ACTTGACACAAATCTAATACGCGAA 59.364 36.000 15.93 0.00 0.00 4.70
78 79 5.696260 TGACACAAATCTAATACGCGAAG 57.304 39.130 15.93 4.52 0.00 3.79
79 80 5.165676 TGACACAAATCTAATACGCGAAGT 58.834 37.500 15.93 0.00 0.00 3.01
80 81 6.324042 TGACACAAATCTAATACGCGAAGTA 58.676 36.000 15.93 0.00 40.03 2.24
81 82 6.807720 TGACACAAATCTAATACGCGAAGTAA 59.192 34.615 15.93 0.00 39.04 2.24
82 83 7.328982 TGACACAAATCTAATACGCGAAGTAAA 59.671 33.333 15.93 0.00 39.04 2.01
83 84 8.020861 ACACAAATCTAATACGCGAAGTAAAA 57.979 30.769 15.93 0.00 39.04 1.52
84 85 8.497554 ACACAAATCTAATACGCGAAGTAAAAA 58.502 29.630 15.93 0.00 39.04 1.94
85 86 8.985694 CACAAATCTAATACGCGAAGTAAAAAG 58.014 33.333 15.93 0.00 39.04 2.27
86 87 8.173130 ACAAATCTAATACGCGAAGTAAAAAGG 58.827 33.333 15.93 0.00 39.04 3.11
87 88 8.385111 CAAATCTAATACGCGAAGTAAAAAGGA 58.615 33.333 15.93 0.00 39.04 3.36
88 89 6.875926 TCTAATACGCGAAGTAAAAAGGAC 57.124 37.500 15.93 0.00 39.04 3.85
89 90 4.934075 AATACGCGAAGTAAAAAGGACC 57.066 40.909 15.93 0.00 39.04 4.46
90 91 1.142474 ACGCGAAGTAAAAAGGACCG 58.858 50.000 15.93 0.00 0.00 4.79
91 92 0.441145 CGCGAAGTAAAAAGGACCGG 59.559 55.000 0.00 0.00 0.00 5.28
92 93 1.799544 GCGAAGTAAAAAGGACCGGA 58.200 50.000 9.46 0.00 0.00 5.14
93 94 1.730612 GCGAAGTAAAAAGGACCGGAG 59.269 52.381 9.46 0.00 0.00 4.63
110 111 4.467198 CGGAGGGAGTACAATGTAAAGT 57.533 45.455 0.00 0.00 0.00 2.66
111 112 5.587388 CGGAGGGAGTACAATGTAAAGTA 57.413 43.478 0.00 0.00 0.00 2.24
112 113 5.589192 CGGAGGGAGTACAATGTAAAGTAG 58.411 45.833 0.00 0.00 0.00 2.57
113 114 5.126707 CGGAGGGAGTACAATGTAAAGTAGT 59.873 44.000 0.00 0.00 0.00 2.73
114 115 6.338937 GGAGGGAGTACAATGTAAAGTAGTG 58.661 44.000 0.00 0.00 0.00 2.74
115 116 6.295719 AGGGAGTACAATGTAAAGTAGTGG 57.704 41.667 0.00 0.00 0.00 4.00
116 117 4.874396 GGGAGTACAATGTAAAGTAGTGGC 59.126 45.833 0.00 0.00 0.00 5.01
117 118 5.484715 GGAGTACAATGTAAAGTAGTGGCA 58.515 41.667 0.00 0.00 0.00 4.92
118 119 5.935789 GGAGTACAATGTAAAGTAGTGGCAA 59.064 40.000 0.00 0.00 0.00 4.52
119 120 6.428771 GGAGTACAATGTAAAGTAGTGGCAAA 59.571 38.462 0.00 0.00 0.00 3.68
120 121 7.120726 GGAGTACAATGTAAAGTAGTGGCAAAT 59.879 37.037 0.00 0.00 0.00 2.32
121 122 8.404107 AGTACAATGTAAAGTAGTGGCAAATT 57.596 30.769 0.00 0.00 0.00 1.82
122 123 8.296713 AGTACAATGTAAAGTAGTGGCAAATTG 58.703 33.333 0.00 0.00 0.00 2.32
123 124 7.049799 ACAATGTAAAGTAGTGGCAAATTGT 57.950 32.000 0.00 0.00 32.45 2.71
124 125 7.145323 ACAATGTAAAGTAGTGGCAAATTGTC 58.855 34.615 0.00 0.00 31.90 3.18
125 126 6.892658 ATGTAAAGTAGTGGCAAATTGTCA 57.107 33.333 0.00 0.00 0.00 3.58
126 127 6.701145 TGTAAAGTAGTGGCAAATTGTCAA 57.299 33.333 0.31 0.00 31.67 3.18
127 128 7.101652 TGTAAAGTAGTGGCAAATTGTCAAA 57.898 32.000 0.31 0.00 31.67 2.69
128 129 7.199766 TGTAAAGTAGTGGCAAATTGTCAAAG 58.800 34.615 0.31 0.00 31.67 2.77
129 130 5.852282 AAGTAGTGGCAAATTGTCAAAGT 57.148 34.783 0.31 0.00 31.67 2.66
130 131 5.186996 AGTAGTGGCAAATTGTCAAAGTG 57.813 39.130 0.31 0.00 31.67 3.16
131 132 2.825205 AGTGGCAAATTGTCAAAGTGC 58.175 42.857 0.31 13.03 31.67 4.40
132 133 2.168106 AGTGGCAAATTGTCAAAGTGCA 59.832 40.909 19.71 8.22 31.67 4.57
133 134 2.935201 GTGGCAAATTGTCAAAGTGCAA 59.065 40.909 19.71 10.29 31.67 4.08
134 135 3.373439 GTGGCAAATTGTCAAAGTGCAAA 59.627 39.130 19.71 9.11 31.67 3.68
135 136 3.622163 TGGCAAATTGTCAAAGTGCAAAG 59.378 39.130 19.71 0.00 33.79 2.77
136 137 3.622612 GGCAAATTGTCAAAGTGCAAAGT 59.377 39.130 19.71 0.00 33.79 2.66
137 138 4.808364 GGCAAATTGTCAAAGTGCAAAGTA 59.192 37.500 19.71 0.00 33.79 2.24
138 139 5.293079 GGCAAATTGTCAAAGTGCAAAGTAA 59.707 36.000 19.71 0.00 33.79 2.24
139 140 6.413269 GCAAATTGTCAAAGTGCAAAGTAAG 58.587 36.000 15.43 0.00 32.86 2.34
140 141 6.255453 GCAAATTGTCAAAGTGCAAAGTAAGA 59.745 34.615 15.43 0.00 32.86 2.10
141 142 7.201513 GCAAATTGTCAAAGTGCAAAGTAAGAA 60.202 33.333 15.43 0.00 32.86 2.52
142 143 8.655092 CAAATTGTCAAAGTGCAAAGTAAGAAA 58.345 29.630 0.00 0.00 0.00 2.52
143 144 8.947055 AATTGTCAAAGTGCAAAGTAAGAAAT 57.053 26.923 0.00 0.00 0.00 2.17
144 145 7.754069 TTGTCAAAGTGCAAAGTAAGAAATG 57.246 32.000 0.00 0.00 0.00 2.32
145 146 6.272318 TGTCAAAGTGCAAAGTAAGAAATGG 58.728 36.000 0.00 0.00 0.00 3.16
146 147 5.175673 GTCAAAGTGCAAAGTAAGAAATGGC 59.824 40.000 0.00 0.00 0.00 4.40
147 148 4.935352 AAGTGCAAAGTAAGAAATGGCA 57.065 36.364 0.00 0.00 0.00 4.92
148 149 4.935352 AGTGCAAAGTAAGAAATGGCAA 57.065 36.364 0.00 0.00 0.00 4.52
149 150 5.275067 AGTGCAAAGTAAGAAATGGCAAA 57.725 34.783 0.00 0.00 0.00 3.68
150 151 5.857268 AGTGCAAAGTAAGAAATGGCAAAT 58.143 33.333 0.00 0.00 0.00 2.32
151 152 6.991938 AGTGCAAAGTAAGAAATGGCAAATA 58.008 32.000 0.00 0.00 0.00 1.40
152 153 7.441017 AGTGCAAAGTAAGAAATGGCAAATAA 58.559 30.769 0.00 0.00 0.00 1.40
153 154 8.096414 AGTGCAAAGTAAGAAATGGCAAATAAT 58.904 29.630 0.00 0.00 0.00 1.28
154 155 9.364989 GTGCAAAGTAAGAAATGGCAAATAATA 57.635 29.630 0.00 0.00 0.00 0.98
155 156 9.935241 TGCAAAGTAAGAAATGGCAAATAATAA 57.065 25.926 0.00 0.00 0.00 1.40
191 192 5.535753 AGTGAGGTAAAAGCAAAGCAAAT 57.464 34.783 0.00 0.00 0.00 2.32
351 359 1.443828 CCGGCCTCCTCTTCTAAGC 59.556 63.158 0.00 0.00 0.00 3.09
352 360 1.443828 CGGCCTCCTCTTCTAAGCC 59.556 63.158 0.00 0.00 37.03 4.35
353 361 1.045911 CGGCCTCCTCTTCTAAGCCT 61.046 60.000 0.00 0.00 38.27 4.58
354 362 0.467804 GGCCTCCTCTTCTAAGCCTG 59.532 60.000 0.00 0.00 37.42 4.85
355 363 1.199615 GCCTCCTCTTCTAAGCCTGT 58.800 55.000 0.00 0.00 0.00 4.00
356 364 1.557371 GCCTCCTCTTCTAAGCCTGTT 59.443 52.381 0.00 0.00 0.00 3.16
357 365 2.026729 GCCTCCTCTTCTAAGCCTGTTT 60.027 50.000 0.00 0.00 0.00 2.83
358 366 3.604582 CCTCCTCTTCTAAGCCTGTTTG 58.395 50.000 0.00 0.00 0.00 2.93
359 367 3.604582 CTCCTCTTCTAAGCCTGTTTGG 58.395 50.000 0.00 0.00 39.35 3.28
360 368 2.979678 TCCTCTTCTAAGCCTGTTTGGT 59.020 45.455 0.00 0.00 38.35 3.67
361 369 4.164981 TCCTCTTCTAAGCCTGTTTGGTA 58.835 43.478 0.00 0.00 38.35 3.25
362 370 4.595781 TCCTCTTCTAAGCCTGTTTGGTAA 59.404 41.667 0.00 0.00 38.35 2.85
363 371 5.072600 TCCTCTTCTAAGCCTGTTTGGTAAA 59.927 40.000 0.00 0.00 38.35 2.01
364 372 5.181433 CCTCTTCTAAGCCTGTTTGGTAAAC 59.819 44.000 0.00 0.00 41.73 2.01
366 374 5.529800 TCTTCTAAGCCTGTTTGGTAAACAC 59.470 40.000 3.20 0.00 45.79 3.32
367 375 5.043737 TCTAAGCCTGTTTGGTAAACACT 57.956 39.130 3.20 0.00 45.79 3.55
368 376 5.442391 TCTAAGCCTGTTTGGTAAACACTT 58.558 37.500 12.10 12.10 45.79 3.16
369 377 6.593807 TCTAAGCCTGTTTGGTAAACACTTA 58.406 36.000 12.73 12.73 45.79 2.24
370 378 5.767816 AAGCCTGTTTGGTAAACACTTAG 57.232 39.130 3.20 0.00 45.79 2.18
371 379 4.142038 AGCCTGTTTGGTAAACACTTAGG 58.858 43.478 3.20 4.95 45.79 2.69
372 380 3.305131 GCCTGTTTGGTAAACACTTAGGC 60.305 47.826 15.14 15.14 45.79 3.93
373 381 3.886505 CCTGTTTGGTAAACACTTAGGCA 59.113 43.478 3.20 0.00 45.79 4.75
374 382 4.023193 CCTGTTTGGTAAACACTTAGGCAG 60.023 45.833 3.20 0.00 45.79 4.85
375 383 3.886505 TGTTTGGTAAACACTTAGGCAGG 59.113 43.478 3.20 0.00 45.79 4.85
376 384 2.871096 TGGTAAACACTTAGGCAGGG 57.129 50.000 0.00 0.00 0.00 4.45
377 385 1.353022 TGGTAAACACTTAGGCAGGGG 59.647 52.381 0.00 0.00 0.00 4.79
378 386 1.631898 GGTAAACACTTAGGCAGGGGA 59.368 52.381 0.00 0.00 0.00 4.81
379 387 2.040679 GGTAAACACTTAGGCAGGGGAA 59.959 50.000 0.00 0.00 0.00 3.97
380 388 3.308904 GGTAAACACTTAGGCAGGGGAAT 60.309 47.826 0.00 0.00 0.00 3.01
381 389 2.514458 AACACTTAGGCAGGGGAATG 57.486 50.000 0.00 0.00 0.00 2.67
382 390 0.625849 ACACTTAGGCAGGGGAATGG 59.374 55.000 0.00 0.00 0.00 3.16
383 391 0.106519 CACTTAGGCAGGGGAATGGG 60.107 60.000 0.00 0.00 0.00 4.00
384 392 0.253630 ACTTAGGCAGGGGAATGGGA 60.254 55.000 0.00 0.00 0.00 4.37
385 393 0.475906 CTTAGGCAGGGGAATGGGAG 59.524 60.000 0.00 0.00 0.00 4.30
386 394 0.253630 TTAGGCAGGGGAATGGGAGT 60.254 55.000 0.00 0.00 0.00 3.85
387 395 0.253630 TAGGCAGGGGAATGGGAGTT 60.254 55.000 0.00 0.00 0.00 3.01
388 396 1.149133 AGGCAGGGGAATGGGAGTTT 61.149 55.000 0.00 0.00 0.00 2.66
389 397 0.972471 GGCAGGGGAATGGGAGTTTG 60.972 60.000 0.00 0.00 0.00 2.93
390 398 1.607801 GCAGGGGAATGGGAGTTTGC 61.608 60.000 0.00 0.00 0.00 3.68
391 399 0.251742 CAGGGGAATGGGAGTTTGCA 60.252 55.000 0.00 0.00 0.00 4.08
392 400 0.251787 AGGGGAATGGGAGTTTGCAC 60.252 55.000 0.00 0.00 0.00 4.57
393 401 0.541764 GGGGAATGGGAGTTTGCACA 60.542 55.000 0.00 0.00 0.00 4.57
394 402 1.337118 GGGAATGGGAGTTTGCACAA 58.663 50.000 0.00 0.00 0.00 3.33
395 403 1.273327 GGGAATGGGAGTTTGCACAAG 59.727 52.381 0.00 0.00 0.00 3.16
396 404 1.963515 GGAATGGGAGTTTGCACAAGT 59.036 47.619 0.00 0.00 0.00 3.16
397 405 2.288395 GGAATGGGAGTTTGCACAAGTG 60.288 50.000 0.00 0.00 0.00 3.16
398 406 2.071778 ATGGGAGTTTGCACAAGTGT 57.928 45.000 1.79 0.00 0.00 3.55
412 420 5.964958 CACAAGTGTGTTTATGAAGGGAT 57.035 39.130 3.17 0.00 40.96 3.85
413 421 6.331369 CACAAGTGTGTTTATGAAGGGATT 57.669 37.500 3.17 0.00 40.96 3.01
414 422 7.447374 CACAAGTGTGTTTATGAAGGGATTA 57.553 36.000 3.17 0.00 40.96 1.75
415 423 7.530010 CACAAGTGTGTTTATGAAGGGATTAG 58.470 38.462 3.17 0.00 40.96 1.73
416 424 7.174946 CACAAGTGTGTTTATGAAGGGATTAGT 59.825 37.037 3.17 0.00 40.96 2.24
417 425 7.390718 ACAAGTGTGTTTATGAAGGGATTAGTC 59.609 37.037 0.00 0.00 32.58 2.59
418 426 7.016153 AGTGTGTTTATGAAGGGATTAGTCA 57.984 36.000 0.00 0.00 0.00 3.41
419 427 7.633789 AGTGTGTTTATGAAGGGATTAGTCAT 58.366 34.615 0.00 0.00 0.00 3.06
420 428 7.554118 AGTGTGTTTATGAAGGGATTAGTCATG 59.446 37.037 0.00 0.00 0.00 3.07
421 429 6.828273 TGTGTTTATGAAGGGATTAGTCATGG 59.172 38.462 0.00 0.00 0.00 3.66
422 430 6.263168 GTGTTTATGAAGGGATTAGTCATGGG 59.737 42.308 0.00 0.00 0.00 4.00
423 431 6.159575 TGTTTATGAAGGGATTAGTCATGGGA 59.840 38.462 0.00 0.00 0.00 4.37
424 432 6.840090 TTATGAAGGGATTAGTCATGGGAA 57.160 37.500 0.00 0.00 0.00 3.97
425 433 4.778213 TGAAGGGATTAGTCATGGGAAG 57.222 45.455 0.00 0.00 0.00 3.46
426 434 4.111577 TGAAGGGATTAGTCATGGGAAGT 58.888 43.478 0.00 0.00 0.00 3.01
427 435 5.285401 TGAAGGGATTAGTCATGGGAAGTA 58.715 41.667 0.00 0.00 0.00 2.24
428 436 5.366768 TGAAGGGATTAGTCATGGGAAGTAG 59.633 44.000 0.00 0.00 0.00 2.57
429 437 5.157770 AGGGATTAGTCATGGGAAGTAGA 57.842 43.478 0.00 0.00 0.00 2.59
430 438 5.731924 AGGGATTAGTCATGGGAAGTAGAT 58.268 41.667 0.00 0.00 0.00 1.98
431 439 6.153924 AGGGATTAGTCATGGGAAGTAGATT 58.846 40.000 0.00 0.00 0.00 2.40
432 440 6.621514 AGGGATTAGTCATGGGAAGTAGATTT 59.378 38.462 0.00 0.00 0.00 2.17
433 441 7.129504 AGGGATTAGTCATGGGAAGTAGATTTT 59.870 37.037 0.00 0.00 0.00 1.82
434 442 7.780271 GGGATTAGTCATGGGAAGTAGATTTTT 59.220 37.037 0.00 0.00 0.00 1.94
435 443 9.847224 GGATTAGTCATGGGAAGTAGATTTTTA 57.153 33.333 0.00 0.00 0.00 1.52
438 446 9.886132 TTAGTCATGGGAAGTAGATTTTTACTC 57.114 33.333 0.00 0.00 32.84 2.59
439 447 7.339482 AGTCATGGGAAGTAGATTTTTACTCC 58.661 38.462 0.00 0.00 32.84 3.85
440 448 6.542735 GTCATGGGAAGTAGATTTTTACTCCC 59.457 42.308 0.00 0.00 39.23 4.30
441 449 6.216662 TCATGGGAAGTAGATTTTTACTCCCA 59.783 38.462 17.64 17.64 45.03 4.37
442 450 6.652205 TGGGAAGTAGATTTTTACTCCCAT 57.348 37.500 14.16 0.00 41.21 4.00
443 451 7.039722 TGGGAAGTAGATTTTTACTCCCATT 57.960 36.000 14.16 0.00 41.21 3.16
444 452 7.116736 TGGGAAGTAGATTTTTACTCCCATTC 58.883 38.462 14.16 0.00 41.21 2.67
445 453 6.546403 GGGAAGTAGATTTTTACTCCCATTCC 59.454 42.308 12.09 0.00 38.95 3.01
446 454 6.546403 GGAAGTAGATTTTTACTCCCATTCCC 59.454 42.308 0.00 0.00 32.84 3.97
447 455 6.910259 AGTAGATTTTTACTCCCATTCCCT 57.090 37.500 0.00 0.00 0.00 4.20
448 456 7.285340 AGTAGATTTTTACTCCCATTCCCTT 57.715 36.000 0.00 0.00 0.00 3.95
449 457 7.119387 AGTAGATTTTTACTCCCATTCCCTTG 58.881 38.462 0.00 0.00 0.00 3.61
450 458 5.903923 AGATTTTTACTCCCATTCCCTTGT 58.096 37.500 0.00 0.00 0.00 3.16
451 459 6.322931 AGATTTTTACTCCCATTCCCTTGTT 58.677 36.000 0.00 0.00 0.00 2.83
452 460 6.787458 AGATTTTTACTCCCATTCCCTTGTTT 59.213 34.615 0.00 0.00 0.00 2.83
453 461 5.799827 TTTTACTCCCATTCCCTTGTTTG 57.200 39.130 0.00 0.00 0.00 2.93
454 462 2.309136 ACTCCCATTCCCTTGTTTGG 57.691 50.000 0.00 0.00 0.00 3.28
455 463 1.503347 ACTCCCATTCCCTTGTTTGGT 59.497 47.619 0.00 0.00 0.00 3.67
456 464 2.719705 ACTCCCATTCCCTTGTTTGGTA 59.280 45.455 0.00 0.00 0.00 3.25
457 465 3.336694 ACTCCCATTCCCTTGTTTGGTAT 59.663 43.478 0.00 0.00 0.00 2.73
458 466 4.542525 ACTCCCATTCCCTTGTTTGGTATA 59.457 41.667 0.00 0.00 0.00 1.47
459 467 5.195756 ACTCCCATTCCCTTGTTTGGTATAT 59.804 40.000 0.00 0.00 0.00 0.86
460 468 5.454062 TCCCATTCCCTTGTTTGGTATATG 58.546 41.667 0.00 0.00 0.00 1.78
461 469 5.194740 TCCCATTCCCTTGTTTGGTATATGA 59.805 40.000 0.00 0.00 0.00 2.15
462 470 6.077322 CCCATTCCCTTGTTTGGTATATGAT 58.923 40.000 0.00 0.00 0.00 2.45
463 471 6.015180 CCCATTCCCTTGTTTGGTATATGATG 60.015 42.308 0.00 0.00 0.00 3.07
464 472 6.015180 CCATTCCCTTGTTTGGTATATGATGG 60.015 42.308 0.00 0.00 0.00 3.51
465 473 5.060427 TCCCTTGTTTGGTATATGATGGG 57.940 43.478 0.00 0.00 0.00 4.00
466 474 4.729370 TCCCTTGTTTGGTATATGATGGGA 59.271 41.667 0.00 0.00 37.65 4.37
467 475 5.194740 TCCCTTGTTTGGTATATGATGGGAA 59.805 40.000 0.00 0.00 37.12 3.97
468 476 6.077322 CCCTTGTTTGGTATATGATGGGAAT 58.923 40.000 0.00 0.00 33.14 3.01
469 477 6.554605 CCCTTGTTTGGTATATGATGGGAATT 59.445 38.462 0.00 0.00 33.14 2.17
470 478 7.728083 CCCTTGTTTGGTATATGATGGGAATTA 59.272 37.037 0.00 0.00 33.14 1.40
471 479 8.796475 CCTTGTTTGGTATATGATGGGAATTAG 58.204 37.037 0.00 0.00 0.00 1.73
472 480 7.759489 TGTTTGGTATATGATGGGAATTAGC 57.241 36.000 0.00 0.00 0.00 3.09
473 481 6.429692 TGTTTGGTATATGATGGGAATTAGCG 59.570 38.462 0.00 0.00 0.00 4.26
474 482 5.755409 TGGTATATGATGGGAATTAGCGT 57.245 39.130 0.00 0.00 0.00 5.07
475 483 5.487433 TGGTATATGATGGGAATTAGCGTG 58.513 41.667 0.00 0.00 0.00 5.34
476 484 4.876107 GGTATATGATGGGAATTAGCGTGG 59.124 45.833 0.00 0.00 0.00 4.94
477 485 2.276732 ATGATGGGAATTAGCGTGGG 57.723 50.000 0.00 0.00 0.00 4.61
478 486 1.208706 TGATGGGAATTAGCGTGGGA 58.791 50.000 0.00 0.00 0.00 4.37
479 487 1.774254 TGATGGGAATTAGCGTGGGAT 59.226 47.619 0.00 0.00 0.00 3.85
480 488 2.976185 TGATGGGAATTAGCGTGGGATA 59.024 45.455 0.00 0.00 0.00 2.59
481 489 3.392947 TGATGGGAATTAGCGTGGGATAA 59.607 43.478 0.00 0.00 0.00 1.75
482 490 3.935818 TGGGAATTAGCGTGGGATAAA 57.064 42.857 0.00 0.00 0.00 1.40
483 491 4.237976 TGGGAATTAGCGTGGGATAAAA 57.762 40.909 0.00 0.00 0.00 1.52
484 492 3.949113 TGGGAATTAGCGTGGGATAAAAC 59.051 43.478 0.00 0.00 0.00 2.43
485 493 4.204799 GGGAATTAGCGTGGGATAAAACT 58.795 43.478 0.00 0.00 0.00 2.66
486 494 4.275196 GGGAATTAGCGTGGGATAAAACTC 59.725 45.833 0.00 0.00 0.00 3.01
487 495 5.123936 GGAATTAGCGTGGGATAAAACTCT 58.876 41.667 0.00 0.00 0.00 3.24
488 496 5.007724 GGAATTAGCGTGGGATAAAACTCTG 59.992 44.000 0.00 0.00 0.00 3.35
489 497 1.739067 AGCGTGGGATAAAACTCTGC 58.261 50.000 0.00 0.00 0.00 4.26
490 498 1.279271 AGCGTGGGATAAAACTCTGCT 59.721 47.619 0.00 0.00 0.00 4.24
491 499 1.666189 GCGTGGGATAAAACTCTGCTC 59.334 52.381 0.00 0.00 0.00 4.26
492 500 2.935238 GCGTGGGATAAAACTCTGCTCA 60.935 50.000 0.00 0.00 0.00 4.26
493 501 2.673368 CGTGGGATAAAACTCTGCTCAC 59.327 50.000 0.00 0.00 0.00 3.51
494 502 2.673368 GTGGGATAAAACTCTGCTCACG 59.327 50.000 0.00 0.00 0.00 4.35
495 503 2.565391 TGGGATAAAACTCTGCTCACGA 59.435 45.455 0.00 0.00 0.00 4.35
496 504 3.007506 TGGGATAAAACTCTGCTCACGAA 59.992 43.478 0.00 0.00 0.00 3.85
497 505 4.192317 GGGATAAAACTCTGCTCACGAAT 58.808 43.478 0.00 0.00 0.00 3.34
498 506 4.636206 GGGATAAAACTCTGCTCACGAATT 59.364 41.667 0.00 0.00 0.00 2.17
499 507 5.815740 GGGATAAAACTCTGCTCACGAATTA 59.184 40.000 0.00 0.00 0.00 1.40
500 508 6.315393 GGGATAAAACTCTGCTCACGAATTAA 59.685 38.462 0.00 0.00 0.00 1.40
501 509 7.180748 GGATAAAACTCTGCTCACGAATTAAC 58.819 38.462 0.00 0.00 0.00 2.01
502 510 7.148474 GGATAAAACTCTGCTCACGAATTAACA 60.148 37.037 0.00 0.00 0.00 2.41
503 511 5.597813 AAACTCTGCTCACGAATTAACAG 57.402 39.130 0.00 0.00 0.00 3.16
504 512 3.589988 ACTCTGCTCACGAATTAACAGG 58.410 45.455 0.00 0.00 0.00 4.00
505 513 2.932614 CTCTGCTCACGAATTAACAGGG 59.067 50.000 0.00 0.00 0.00 4.45
506 514 2.301870 TCTGCTCACGAATTAACAGGGT 59.698 45.455 0.00 0.00 0.00 4.34
507 515 3.512329 TCTGCTCACGAATTAACAGGGTA 59.488 43.478 0.00 0.00 0.00 3.69
508 516 3.592059 TGCTCACGAATTAACAGGGTAC 58.408 45.455 0.00 0.00 0.00 3.34
524 532 3.859061 GGTACCCCTGGGAAGAAATAG 57.141 52.381 16.20 0.00 38.96 1.73
525 533 2.442126 GGTACCCCTGGGAAGAAATAGG 59.558 54.545 16.20 0.00 38.96 2.57
526 534 2.378308 ACCCCTGGGAAGAAATAGGT 57.622 50.000 16.20 0.00 38.96 3.08
527 535 1.923148 ACCCCTGGGAAGAAATAGGTG 59.077 52.381 16.20 0.00 38.96 4.00
528 536 1.215423 CCCCTGGGAAGAAATAGGTGG 59.785 57.143 16.20 0.00 37.50 4.61
529 537 1.215423 CCCTGGGAAGAAATAGGTGGG 59.785 57.143 7.01 0.00 0.00 4.61
530 538 2.205342 CCTGGGAAGAAATAGGTGGGA 58.795 52.381 0.00 0.00 0.00 4.37
531 539 2.580783 CCTGGGAAGAAATAGGTGGGAA 59.419 50.000 0.00 0.00 0.00 3.97
532 540 3.205282 CCTGGGAAGAAATAGGTGGGAAT 59.795 47.826 0.00 0.00 0.00 3.01
533 541 4.326132 CCTGGGAAGAAATAGGTGGGAATT 60.326 45.833 0.00 0.00 0.00 2.17
534 542 4.609301 TGGGAAGAAATAGGTGGGAATTG 58.391 43.478 0.00 0.00 0.00 2.32
535 543 3.960755 GGGAAGAAATAGGTGGGAATTGG 59.039 47.826 0.00 0.00 0.00 3.16
536 544 3.384789 GGAAGAAATAGGTGGGAATTGGC 59.615 47.826 0.00 0.00 0.00 4.52
537 545 4.281657 GAAGAAATAGGTGGGAATTGGCT 58.718 43.478 0.00 0.00 0.00 4.75
538 546 4.337264 AGAAATAGGTGGGAATTGGCTT 57.663 40.909 0.00 0.00 0.00 4.35
539 547 4.281657 AGAAATAGGTGGGAATTGGCTTC 58.718 43.478 0.00 0.00 0.00 3.86
549 557 2.095461 GAATTGGCTTCCTCAACTCCC 58.905 52.381 0.00 0.00 0.00 4.30
550 558 1.075601 ATTGGCTTCCTCAACTCCCA 58.924 50.000 0.00 0.00 0.00 4.37
551 559 1.075601 TTGGCTTCCTCAACTCCCAT 58.924 50.000 0.00 0.00 0.00 4.00
552 560 1.075601 TGGCTTCCTCAACTCCCATT 58.924 50.000 0.00 0.00 0.00 3.16
553 561 1.004745 TGGCTTCCTCAACTCCCATTC 59.995 52.381 0.00 0.00 0.00 2.67
554 562 1.683319 GGCTTCCTCAACTCCCATTCC 60.683 57.143 0.00 0.00 0.00 3.01
555 563 1.683319 GCTTCCTCAACTCCCATTCCC 60.683 57.143 0.00 0.00 0.00 3.97
556 564 0.999712 TTCCTCAACTCCCATTCCCC 59.000 55.000 0.00 0.00 0.00 4.81
557 565 0.121197 TCCTCAACTCCCATTCCCCT 59.879 55.000 0.00 0.00 0.00 4.79
558 566 1.002857 CCTCAACTCCCATTCCCCTT 58.997 55.000 0.00 0.00 0.00 3.95
559 567 1.064389 CCTCAACTCCCATTCCCCTTC 60.064 57.143 0.00 0.00 0.00 3.46
560 568 0.999712 TCAACTCCCATTCCCCTTCC 59.000 55.000 0.00 0.00 0.00 3.46
561 569 1.002857 CAACTCCCATTCCCCTTCCT 58.997 55.000 0.00 0.00 0.00 3.36
562 570 1.002857 AACTCCCATTCCCCTTCCTG 58.997 55.000 0.00 0.00 0.00 3.86
563 571 1.228510 CTCCCATTCCCCTTCCTGC 59.771 63.158 0.00 0.00 0.00 4.85
564 572 1.230281 TCCCATTCCCCTTCCTGCT 60.230 57.895 0.00 0.00 0.00 4.24
565 573 0.850883 TCCCATTCCCCTTCCTGCTT 60.851 55.000 0.00 0.00 0.00 3.91
566 574 0.926293 CCCATTCCCCTTCCTGCTTA 59.074 55.000 0.00 0.00 0.00 3.09
567 575 1.287739 CCCATTCCCCTTCCTGCTTAA 59.712 52.381 0.00 0.00 0.00 1.85
568 576 2.292192 CCCATTCCCCTTCCTGCTTAAA 60.292 50.000 0.00 0.00 0.00 1.52
569 577 2.760650 CCATTCCCCTTCCTGCTTAAAC 59.239 50.000 0.00 0.00 0.00 2.01
570 578 3.564352 CCATTCCCCTTCCTGCTTAAACT 60.564 47.826 0.00 0.00 0.00 2.66
571 579 3.434940 TTCCCCTTCCTGCTTAAACTC 57.565 47.619 0.00 0.00 0.00 3.01
572 580 2.632537 TCCCCTTCCTGCTTAAACTCT 58.367 47.619 0.00 0.00 0.00 3.24
573 581 2.572104 TCCCCTTCCTGCTTAAACTCTC 59.428 50.000 0.00 0.00 0.00 3.20
574 582 2.305927 CCCCTTCCTGCTTAAACTCTCA 59.694 50.000 0.00 0.00 0.00 3.27
575 583 3.054065 CCCCTTCCTGCTTAAACTCTCAT 60.054 47.826 0.00 0.00 0.00 2.90
576 584 4.568592 CCCCTTCCTGCTTAAACTCTCATT 60.569 45.833 0.00 0.00 0.00 2.57
577 585 4.637977 CCCTTCCTGCTTAAACTCTCATTC 59.362 45.833 0.00 0.00 0.00 2.67
578 586 4.637977 CCTTCCTGCTTAAACTCTCATTCC 59.362 45.833 0.00 0.00 0.00 3.01
579 587 4.222124 TCCTGCTTAAACTCTCATTCCC 57.778 45.455 0.00 0.00 0.00 3.97
580 588 3.846588 TCCTGCTTAAACTCTCATTCCCT 59.153 43.478 0.00 0.00 0.00 4.20
581 589 4.080863 TCCTGCTTAAACTCTCATTCCCTC 60.081 45.833 0.00 0.00 0.00 4.30
582 590 4.080638 CCTGCTTAAACTCTCATTCCCTCT 60.081 45.833 0.00 0.00 0.00 3.69
583 591 5.129485 CCTGCTTAAACTCTCATTCCCTCTA 59.871 44.000 0.00 0.00 0.00 2.43
584 592 6.352222 CCTGCTTAAACTCTCATTCCCTCTAA 60.352 42.308 0.00 0.00 0.00 2.10
585 593 7.200434 TGCTTAAACTCTCATTCCCTCTAAT 57.800 36.000 0.00 0.00 0.00 1.73
586 594 7.275920 TGCTTAAACTCTCATTCCCTCTAATC 58.724 38.462 0.00 0.00 0.00 1.75
587 595 7.092891 TGCTTAAACTCTCATTCCCTCTAATCA 60.093 37.037 0.00 0.00 0.00 2.57
588 596 7.770897 GCTTAAACTCTCATTCCCTCTAATCAA 59.229 37.037 0.00 0.00 0.00 2.57
589 597 9.672673 CTTAAACTCTCATTCCCTCTAATCAAA 57.327 33.333 0.00 0.00 0.00 2.69
590 598 7.929941 AAACTCTCATTCCCTCTAATCAAAC 57.070 36.000 0.00 0.00 0.00 2.93
591 599 6.627087 ACTCTCATTCCCTCTAATCAAACA 57.373 37.500 0.00 0.00 0.00 2.83
592 600 6.648192 ACTCTCATTCCCTCTAATCAAACAG 58.352 40.000 0.00 0.00 0.00 3.16
593 601 6.214412 ACTCTCATTCCCTCTAATCAAACAGT 59.786 38.462 0.00 0.00 0.00 3.55
594 602 6.409704 TCTCATTCCCTCTAATCAAACAGTG 58.590 40.000 0.00 0.00 0.00 3.66
595 603 5.500234 TCATTCCCTCTAATCAAACAGTGG 58.500 41.667 0.00 0.00 0.00 4.00
596 604 5.250543 TCATTCCCTCTAATCAAACAGTGGA 59.749 40.000 0.00 0.00 0.00 4.02
597 605 4.553330 TCCCTCTAATCAAACAGTGGAC 57.447 45.455 0.00 0.00 0.00 4.02
598 606 4.168101 TCCCTCTAATCAAACAGTGGACT 58.832 43.478 0.00 0.00 0.00 3.85
599 607 4.597507 TCCCTCTAATCAAACAGTGGACTT 59.402 41.667 0.00 0.00 0.00 3.01
600 608 5.073144 TCCCTCTAATCAAACAGTGGACTTT 59.927 40.000 0.00 0.00 0.00 2.66
601 609 5.770162 CCCTCTAATCAAACAGTGGACTTTT 59.230 40.000 0.00 0.00 0.00 2.27
602 610 6.940298 CCCTCTAATCAAACAGTGGACTTTTA 59.060 38.462 0.00 0.00 0.00 1.52
603 611 7.447238 CCCTCTAATCAAACAGTGGACTTTTAA 59.553 37.037 0.00 0.00 0.00 1.52
604 612 9.014297 CCTCTAATCAAACAGTGGACTTTTAAT 57.986 33.333 0.00 0.00 0.00 1.40
606 614 9.793259 TCTAATCAAACAGTGGACTTTTAATCT 57.207 29.630 0.00 0.00 0.00 2.40
608 616 6.877611 TCAAACAGTGGACTTTTAATCTCC 57.122 37.500 0.00 0.00 0.00 3.71
609 617 6.601332 TCAAACAGTGGACTTTTAATCTCCT 58.399 36.000 0.00 0.00 0.00 3.69
610 618 6.710744 TCAAACAGTGGACTTTTAATCTCCTC 59.289 38.462 0.00 0.00 0.00 3.71
611 619 5.825593 ACAGTGGACTTTTAATCTCCTCA 57.174 39.130 0.00 0.00 0.00 3.86
612 620 5.552178 ACAGTGGACTTTTAATCTCCTCAC 58.448 41.667 0.00 0.00 0.00 3.51
613 621 4.938226 CAGTGGACTTTTAATCTCCTCACC 59.062 45.833 0.00 0.00 0.00 4.02
614 622 4.019231 AGTGGACTTTTAATCTCCTCACCC 60.019 45.833 0.00 0.00 0.00 4.61
615 623 3.265995 TGGACTTTTAATCTCCTCACCCC 59.734 47.826 0.00 0.00 0.00 4.95
616 624 3.523972 GGACTTTTAATCTCCTCACCCCT 59.476 47.826 0.00 0.00 0.00 4.79
617 625 4.384318 GGACTTTTAATCTCCTCACCCCTC 60.384 50.000 0.00 0.00 0.00 4.30
618 626 4.175962 ACTTTTAATCTCCTCACCCCTCA 58.824 43.478 0.00 0.00 0.00 3.86
619 627 4.601857 ACTTTTAATCTCCTCACCCCTCAA 59.398 41.667 0.00 0.00 0.00 3.02
620 628 4.569719 TTTAATCTCCTCACCCCTCAAC 57.430 45.455 0.00 0.00 0.00 3.18
621 629 2.350863 AATCTCCTCACCCCTCAACT 57.649 50.000 0.00 0.00 0.00 3.16
622 630 1.872773 ATCTCCTCACCCCTCAACTC 58.127 55.000 0.00 0.00 0.00 3.01
623 631 0.252284 TCTCCTCACCCCTCAACTCC 60.252 60.000 0.00 0.00 0.00 3.85
624 632 1.229529 TCCTCACCCCTCAACTCCC 60.230 63.158 0.00 0.00 0.00 4.30
625 633 1.538876 CCTCACCCCTCAACTCCCA 60.539 63.158 0.00 0.00 0.00 4.37
626 634 0.916358 CCTCACCCCTCAACTCCCAT 60.916 60.000 0.00 0.00 0.00 4.00
627 635 0.995024 CTCACCCCTCAACTCCCATT 59.005 55.000 0.00 0.00 0.00 3.16
628 636 0.991920 TCACCCCTCAACTCCCATTC 59.008 55.000 0.00 0.00 0.00 2.67
629 637 0.034089 CACCCCTCAACTCCCATTCC 60.034 60.000 0.00 0.00 0.00 3.01
630 638 1.214992 ACCCCTCAACTCCCATTCCC 61.215 60.000 0.00 0.00 0.00 3.97
631 639 1.615262 CCCTCAACTCCCATTCCCC 59.385 63.158 0.00 0.00 0.00 4.81
632 640 1.214305 CCCTCAACTCCCATTCCCCA 61.214 60.000 0.00 0.00 0.00 4.96
633 641 0.929244 CCTCAACTCCCATTCCCCAT 59.071 55.000 0.00 0.00 0.00 4.00
634 642 1.133668 CCTCAACTCCCATTCCCCATC 60.134 57.143 0.00 0.00 0.00 3.51
635 643 1.849039 CTCAACTCCCATTCCCCATCT 59.151 52.381 0.00 0.00 0.00 2.90
636 644 1.846439 TCAACTCCCATTCCCCATCTC 59.154 52.381 0.00 0.00 0.00 2.75
637 645 0.839946 AACTCCCATTCCCCATCTCG 59.160 55.000 0.00 0.00 0.00 4.04
638 646 0.031111 ACTCCCATTCCCCATCTCGA 60.031 55.000 0.00 0.00 0.00 4.04
639 647 1.131638 CTCCCATTCCCCATCTCGAA 58.868 55.000 0.00 0.00 0.00 3.71
640 648 1.701847 CTCCCATTCCCCATCTCGAAT 59.298 52.381 0.00 0.00 0.00 3.34
641 649 2.107204 CTCCCATTCCCCATCTCGAATT 59.893 50.000 0.00 0.00 0.00 2.17
642 650 2.106511 TCCCATTCCCCATCTCGAATTC 59.893 50.000 0.00 0.00 0.00 2.17
643 651 2.508526 CCATTCCCCATCTCGAATTCC 58.491 52.381 0.00 0.00 0.00 3.01
644 652 2.508526 CATTCCCCATCTCGAATTCCC 58.491 52.381 0.00 0.00 0.00 3.97
645 653 0.843984 TTCCCCATCTCGAATTCCCC 59.156 55.000 0.00 0.00 0.00 4.81
646 654 1.060163 TCCCCATCTCGAATTCCCCC 61.060 60.000 0.00 0.00 0.00 5.40
647 655 1.071471 CCCATCTCGAATTCCCCCG 59.929 63.158 0.00 0.00 0.00 5.73
648 656 1.407656 CCCATCTCGAATTCCCCCGA 61.408 60.000 0.00 0.00 0.00 5.14
649 657 0.468226 CCATCTCGAATTCCCCCGAA 59.532 55.000 0.00 0.00 34.17 4.30
650 658 1.583054 CATCTCGAATTCCCCCGAAC 58.417 55.000 0.00 0.00 34.17 3.95
651 659 0.468648 ATCTCGAATTCCCCCGAACC 59.531 55.000 0.00 0.00 34.17 3.62
652 660 0.905809 TCTCGAATTCCCCCGAACCA 60.906 55.000 0.00 0.00 34.17 3.67
653 661 0.035820 CTCGAATTCCCCCGAACCAA 60.036 55.000 0.00 0.00 34.17 3.67
654 662 0.400975 TCGAATTCCCCCGAACCAAA 59.599 50.000 0.00 0.00 0.00 3.28
655 663 0.524414 CGAATTCCCCCGAACCAAAC 59.476 55.000 0.00 0.00 0.00 2.93
656 664 1.623163 GAATTCCCCCGAACCAAACA 58.377 50.000 0.00 0.00 0.00 2.83
657 665 1.271379 GAATTCCCCCGAACCAAACAC 59.729 52.381 0.00 0.00 0.00 3.32
658 666 0.891904 ATTCCCCCGAACCAAACACG 60.892 55.000 0.00 0.00 0.00 4.49
659 667 3.666253 CCCCCGAACCAAACACGC 61.666 66.667 0.00 0.00 0.00 5.34
660 668 2.593436 CCCCGAACCAAACACGCT 60.593 61.111 0.00 0.00 0.00 5.07
661 669 2.637025 CCCGAACCAAACACGCTG 59.363 61.111 0.00 0.00 0.00 5.18
662 670 2.184167 CCCGAACCAAACACGCTGT 61.184 57.895 0.00 0.00 0.00 4.40
663 671 0.881159 CCCGAACCAAACACGCTGTA 60.881 55.000 0.00 0.00 0.00 2.74
664 672 0.938713 CCGAACCAAACACGCTGTAA 59.061 50.000 0.00 0.00 0.00 2.41
665 673 1.070175 CCGAACCAAACACGCTGTAAG 60.070 52.381 0.00 0.00 0.00 2.34
875 888 0.322997 ACGTCACTCCTCCTCCTCAG 60.323 60.000 0.00 0.00 0.00 3.35
975 988 4.593864 GTCGGCCTGCTCGATCCC 62.594 72.222 0.00 0.00 38.93 3.85
1164 1222 1.139095 GTACCTTGTCCTCGCCGAG 59.861 63.158 7.25 7.25 0.00 4.63
1434 1523 0.880278 CGCCATATGTCCCTTGTCCG 60.880 60.000 1.24 0.00 0.00 4.79
1666 1755 0.035820 TTGCTACGGCCCTTTCGATT 60.036 50.000 0.00 0.00 37.74 3.34
1826 1915 1.171308 CTCTGCACCCATGACAAAGG 58.829 55.000 0.00 0.00 0.00 3.11
1865 1954 2.301296 CCATAAGGATCCTGCTCGACAT 59.699 50.000 17.02 0.00 36.89 3.06
1873 1962 0.318529 CCTGCTCGACATGGATCTCG 60.319 60.000 0.00 0.00 0.00 4.04
1956 2045 2.202960 GCAATTGCGGCATGGCAT 60.203 55.556 20.37 2.12 43.52 4.40
1974 2063 4.181010 CCCAGACCCGATGCCCAG 62.181 72.222 0.00 0.00 0.00 4.45
2001 2102 3.507162 TTCCTCAGTTCATGCAGGAAA 57.493 42.857 16.43 0.00 39.86 3.13
2144 2248 2.354074 AAGCAGCCAGTTGCCGTTTG 62.354 55.000 2.62 0.00 45.18 2.93
2431 2903 9.674824 CATCTTTTAATAGCAATTCCATCAGTC 57.325 33.333 0.00 0.00 0.00 3.51
2474 3465 1.102809 TGTGGTGGAACTTGCTGCTG 61.103 55.000 0.00 0.00 36.74 4.41
2489 3480 3.112205 GCTGCCGACCTCCATGGAT 62.112 63.158 16.63 0.00 39.71 3.41
2502 3493 5.075493 CCTCCATGGATGCTTATTAGCTTT 58.925 41.667 16.63 0.00 42.64 3.51
2504 3495 6.041296 CCTCCATGGATGCTTATTAGCTTTTT 59.959 38.462 16.63 0.00 42.64 1.94
2551 3808 5.831103 AGAGCTTCCCCTTAATTTGAATGA 58.169 37.500 0.00 0.00 0.00 2.57
2604 3865 2.746277 CAGGGGCACGCCTGTTAC 60.746 66.667 22.09 0.00 44.92 2.50
2720 4005 1.444119 GCCAACTTTCTGGTGACGCA 61.444 55.000 0.00 0.00 38.86 5.24
3012 4746 9.495382 ACTCCCTCTGTAATTTAATAGAAGACT 57.505 33.333 0.00 0.00 0.00 3.24
3356 5111 4.328983 ACAACGACCGCATTCTAAGTAATG 59.671 41.667 0.00 0.00 39.41 1.90
3463 5218 1.143838 CGGCCATGAGTCGGATGAA 59.856 57.895 2.24 0.00 0.00 2.57
3525 5285 5.688814 ATTCACTTCACTGATGATCCTCA 57.311 39.130 0.52 0.52 33.85 3.86
3526 5286 5.688814 TTCACTTCACTGATGATCCTCAT 57.311 39.130 0.82 0.00 40.34 2.90
3553 5324 2.808543 GCTGTAGCTAGTTTGTGTGCTT 59.191 45.455 0.00 0.00 37.02 3.91
3559 5330 2.878406 GCTAGTTTGTGTGCTTCTTCCA 59.122 45.455 0.00 0.00 0.00 3.53
3587 5358 0.402121 GGGCAGGTCTTCTGAAAGGT 59.598 55.000 0.00 0.00 46.18 3.50
3624 5395 0.391661 TCAGGAAGCGGTCAATCAGC 60.392 55.000 0.00 0.00 37.51 4.26
3643 5426 1.009903 CCGTTGGCGATTGTGACGTA 61.010 55.000 0.00 0.00 41.33 3.57
3644 5427 0.996462 CGTTGGCGATTGTGACGTAT 59.004 50.000 0.00 0.00 41.33 3.06
3659 5442 3.119291 GACGTATCTTGCTGGTCAGATG 58.881 50.000 1.65 0.00 0.00 2.90
3661 5444 1.863454 GTATCTTGCTGGTCAGATGCG 59.137 52.381 1.65 0.00 0.00 4.73
3665 5448 0.671472 TTGCTGGTCAGATGCGTGAG 60.671 55.000 1.65 0.00 0.00 3.51
3707 5490 0.674581 CGCTTGGAGCTGGTGATCAA 60.675 55.000 0.00 0.00 39.60 2.57
3709 5492 1.093159 CTTGGAGCTGGTGATCAAGC 58.907 55.000 10.83 10.83 0.00 4.01
3791 5583 5.836898 TGTGGTCCTTTTGTCTCTAGTTCTA 59.163 40.000 0.00 0.00 0.00 2.10
3843 5635 2.874457 GCAGGTGATACCAGGTTTTCGT 60.874 50.000 0.00 0.00 41.95 3.85
3908 5710 2.028294 CAGCTCTCTGCCTCTCTTTTCA 60.028 50.000 0.00 0.00 44.23 2.69
3912 5714 5.046014 AGCTCTCTGCCTCTCTTTTCAATTA 60.046 40.000 0.00 0.00 44.23 1.40
3924 5726 7.153985 TCTCTTTTCAATTACCAATTTGCTGG 58.846 34.615 0.00 0.00 42.68 4.85
3958 5760 6.570672 ACTAAATATCTCGGTTGAGCGATA 57.429 37.500 5.71 0.00 42.26 2.92
3959 5761 6.380190 ACTAAATATCTCGGTTGAGCGATAC 58.620 40.000 5.71 0.00 42.26 2.24
3961 5763 2.783828 ATCTCGGTTGAGCGATACTG 57.216 50.000 5.71 0.00 42.26 2.74
3963 5765 0.738975 CTCGGTTGAGCGATACTGGA 59.261 55.000 5.71 0.00 34.96 3.86
3966 5768 1.927174 CGGTTGAGCGATACTGGAAAG 59.073 52.381 0.00 0.00 0.00 2.62
4007 6098 3.389656 TGGAATCTGTTGGCATCCGTATA 59.610 43.478 0.00 0.00 32.72 1.47
4008 6099 3.997021 GGAATCTGTTGGCATCCGTATAG 59.003 47.826 0.00 0.00 0.00 1.31
4011 6102 1.867233 CTGTTGGCATCCGTATAGTGC 59.133 52.381 0.00 0.00 38.12 4.40
4014 6105 4.261888 GCATCCGTATAGTGCCCG 57.738 61.111 0.00 0.00 32.88 6.13
4015 6106 1.374252 GCATCCGTATAGTGCCCGG 60.374 63.158 0.00 0.00 43.03 5.73
4017 6108 4.169271 TCCGTATAGTGCCCGGAG 57.831 61.111 0.73 0.00 45.20 4.63
4042 7338 1.227674 GACATGGGATGCTCGACCC 60.228 63.158 1.83 1.83 45.74 4.46
4057 7353 5.818857 TGCTCGACCCAAATAAGGTAATAAC 59.181 40.000 0.00 0.00 37.88 1.89
4059 7355 6.238293 GCTCGACCCAAATAAGGTAATAACAC 60.238 42.308 0.00 0.00 37.88 3.32
4188 7855 1.005630 ACAGCGCTTGTCCTGAGTC 60.006 57.895 7.50 0.00 33.87 3.36
4269 7936 5.995055 AGCTTTGAGAAACGAAATGAGAAG 58.005 37.500 0.00 0.00 0.00 2.85
4436 8103 8.839947 AATGTTTTTGTAGCTTGCAAAATTTC 57.160 26.923 21.46 16.67 42.85 2.17
4441 8108 6.768029 TTGTAGCTTGCAAAATTTCATCAC 57.232 33.333 0.00 0.00 0.00 3.06
4466 8133 5.703978 AATGACATTCGTGGAAAATGTGA 57.296 34.783 6.24 0.00 45.02 3.58
4468 8135 4.384940 TGACATTCGTGGAAAATGTGAGA 58.615 39.130 6.24 0.00 45.02 3.27
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 9.868277 TGTGTCAAGTCAAAATTTATGAAGTTT 57.132 25.926 0.00 0.00 33.71 2.66
37 38 9.868277 TTGTGTCAAGTCAAAATTTATGAAGTT 57.132 25.926 0.00 0.00 0.00 2.66
38 39 9.868277 TTTGTGTCAAGTCAAAATTTATGAAGT 57.132 25.926 0.00 0.00 31.86 3.01
47 48 9.825972 CGTATTAGATTTGTGTCAAGTCAAAAT 57.174 29.630 7.50 8.34 37.16 1.82
48 49 7.801315 GCGTATTAGATTTGTGTCAAGTCAAAA 59.199 33.333 7.50 2.99 37.16 2.44
49 50 7.295201 GCGTATTAGATTTGTGTCAAGTCAAA 58.705 34.615 7.50 0.00 37.82 2.69
50 51 6.400621 CGCGTATTAGATTTGTGTCAAGTCAA 60.401 38.462 0.00 2.05 0.00 3.18
51 52 5.061684 CGCGTATTAGATTTGTGTCAAGTCA 59.938 40.000 0.00 0.00 0.00 3.41
52 53 5.287752 TCGCGTATTAGATTTGTGTCAAGTC 59.712 40.000 5.77 0.00 0.00 3.01
53 54 5.165676 TCGCGTATTAGATTTGTGTCAAGT 58.834 37.500 5.77 0.00 0.00 3.16
54 55 5.696260 TCGCGTATTAGATTTGTGTCAAG 57.304 39.130 5.77 0.00 0.00 3.02
55 56 5.636121 ACTTCGCGTATTAGATTTGTGTCAA 59.364 36.000 5.77 0.00 0.00 3.18
56 57 5.165676 ACTTCGCGTATTAGATTTGTGTCA 58.834 37.500 5.77 0.00 0.00 3.58
57 58 5.697848 ACTTCGCGTATTAGATTTGTGTC 57.302 39.130 5.77 0.00 0.00 3.67
58 59 7.585286 TTTACTTCGCGTATTAGATTTGTGT 57.415 32.000 5.77 0.00 0.00 3.72
59 60 8.868744 TTTTTACTTCGCGTATTAGATTTGTG 57.131 30.769 5.77 0.00 0.00 3.33
60 61 8.173130 CCTTTTTACTTCGCGTATTAGATTTGT 58.827 33.333 5.77 0.00 0.00 2.83
61 62 8.385111 TCCTTTTTACTTCGCGTATTAGATTTG 58.615 33.333 5.77 0.00 0.00 2.32
62 63 8.385858 GTCCTTTTTACTTCGCGTATTAGATTT 58.614 33.333 5.77 0.00 0.00 2.17
63 64 7.010830 GGTCCTTTTTACTTCGCGTATTAGATT 59.989 37.037 5.77 0.00 0.00 2.40
64 65 6.478016 GGTCCTTTTTACTTCGCGTATTAGAT 59.522 38.462 5.77 0.00 0.00 1.98
65 66 5.807011 GGTCCTTTTTACTTCGCGTATTAGA 59.193 40.000 5.77 0.00 0.00 2.10
66 67 5.276067 CGGTCCTTTTTACTTCGCGTATTAG 60.276 44.000 5.77 2.30 0.00 1.73
67 68 4.562394 CGGTCCTTTTTACTTCGCGTATTA 59.438 41.667 5.77 0.00 0.00 0.98
68 69 3.368843 CGGTCCTTTTTACTTCGCGTATT 59.631 43.478 5.77 0.00 0.00 1.89
69 70 2.925563 CGGTCCTTTTTACTTCGCGTAT 59.074 45.455 5.77 0.00 0.00 3.06
70 71 2.327568 CGGTCCTTTTTACTTCGCGTA 58.672 47.619 5.77 0.00 0.00 4.42
71 72 1.142474 CGGTCCTTTTTACTTCGCGT 58.858 50.000 5.77 0.00 0.00 6.01
72 73 0.441145 CCGGTCCTTTTTACTTCGCG 59.559 55.000 0.00 0.00 0.00 5.87
73 74 1.730612 CTCCGGTCCTTTTTACTTCGC 59.269 52.381 0.00 0.00 0.00 4.70
74 75 2.344025 CCTCCGGTCCTTTTTACTTCG 58.656 52.381 0.00 0.00 0.00 3.79
75 76 2.303890 TCCCTCCGGTCCTTTTTACTTC 59.696 50.000 0.00 0.00 0.00 3.01
76 77 2.305052 CTCCCTCCGGTCCTTTTTACTT 59.695 50.000 0.00 0.00 0.00 2.24
77 78 1.907255 CTCCCTCCGGTCCTTTTTACT 59.093 52.381 0.00 0.00 0.00 2.24
78 79 1.627329 ACTCCCTCCGGTCCTTTTTAC 59.373 52.381 0.00 0.00 0.00 2.01
79 80 2.034436 ACTCCCTCCGGTCCTTTTTA 57.966 50.000 0.00 0.00 0.00 1.52
80 81 1.627329 GTACTCCCTCCGGTCCTTTTT 59.373 52.381 0.00 0.00 0.00 1.94
81 82 1.273759 GTACTCCCTCCGGTCCTTTT 58.726 55.000 0.00 0.00 0.00 2.27
82 83 0.115745 TGTACTCCCTCCGGTCCTTT 59.884 55.000 0.00 0.00 0.00 3.11
83 84 0.115745 TTGTACTCCCTCCGGTCCTT 59.884 55.000 0.00 0.00 0.00 3.36
84 85 0.338814 ATTGTACTCCCTCCGGTCCT 59.661 55.000 0.00 0.00 0.00 3.85
85 86 0.464452 CATTGTACTCCCTCCGGTCC 59.536 60.000 0.00 0.00 0.00 4.46
86 87 1.192428 ACATTGTACTCCCTCCGGTC 58.808 55.000 0.00 0.00 0.00 4.79
87 88 2.537633 TACATTGTACTCCCTCCGGT 57.462 50.000 0.00 0.00 0.00 5.28
88 89 3.197116 ACTTTACATTGTACTCCCTCCGG 59.803 47.826 0.00 0.00 0.00 5.14
89 90 4.467198 ACTTTACATTGTACTCCCTCCG 57.533 45.455 0.00 0.00 0.00 4.63
90 91 6.338937 CACTACTTTACATTGTACTCCCTCC 58.661 44.000 0.00 0.00 0.00 4.30
91 92 6.338937 CCACTACTTTACATTGTACTCCCTC 58.661 44.000 0.00 0.00 0.00 4.30
92 93 5.338137 GCCACTACTTTACATTGTACTCCCT 60.338 44.000 0.00 0.00 0.00 4.20
93 94 4.874396 GCCACTACTTTACATTGTACTCCC 59.126 45.833 0.00 0.00 0.00 4.30
94 95 5.484715 TGCCACTACTTTACATTGTACTCC 58.515 41.667 0.00 0.00 0.00 3.85
95 96 7.429636 TTTGCCACTACTTTACATTGTACTC 57.570 36.000 0.00 0.00 0.00 2.59
96 97 7.996098 ATTTGCCACTACTTTACATTGTACT 57.004 32.000 0.00 0.00 0.00 2.73
97 98 8.079809 ACAATTTGCCACTACTTTACATTGTAC 58.920 33.333 0.00 0.00 32.04 2.90
98 99 8.172352 ACAATTTGCCACTACTTTACATTGTA 57.828 30.769 0.00 0.00 32.04 2.41
99 100 7.049799 ACAATTTGCCACTACTTTACATTGT 57.950 32.000 0.00 0.00 0.00 2.71
100 101 7.144661 TGACAATTTGCCACTACTTTACATTG 58.855 34.615 0.00 0.00 0.00 2.82
101 102 7.283625 TGACAATTTGCCACTACTTTACATT 57.716 32.000 0.00 0.00 0.00 2.71
102 103 6.892658 TGACAATTTGCCACTACTTTACAT 57.107 33.333 0.00 0.00 0.00 2.29
103 104 6.701145 TTGACAATTTGCCACTACTTTACA 57.299 33.333 0.00 0.00 0.00 2.41
104 105 7.167468 CACTTTGACAATTTGCCACTACTTTAC 59.833 37.037 0.00 0.00 0.00 2.01
105 106 7.199766 CACTTTGACAATTTGCCACTACTTTA 58.800 34.615 0.00 0.00 0.00 1.85
106 107 6.042143 CACTTTGACAATTTGCCACTACTTT 58.958 36.000 0.00 0.00 0.00 2.66
107 108 5.591099 CACTTTGACAATTTGCCACTACTT 58.409 37.500 0.00 0.00 0.00 2.24
108 109 4.499696 GCACTTTGACAATTTGCCACTACT 60.500 41.667 9.42 0.00 0.00 2.57
109 110 3.735746 GCACTTTGACAATTTGCCACTAC 59.264 43.478 9.42 0.00 0.00 2.73
110 111 3.382865 TGCACTTTGACAATTTGCCACTA 59.617 39.130 15.39 0.00 31.94 2.74
111 112 2.168106 TGCACTTTGACAATTTGCCACT 59.832 40.909 15.39 0.00 31.94 4.00
112 113 2.548875 TGCACTTTGACAATTTGCCAC 58.451 42.857 15.39 0.00 31.94 5.01
113 114 2.975732 TGCACTTTGACAATTTGCCA 57.024 40.000 15.39 0.00 31.94 4.92
114 115 3.622612 ACTTTGCACTTTGACAATTTGCC 59.377 39.130 15.39 0.00 31.94 4.52
115 116 4.863152 ACTTTGCACTTTGACAATTTGC 57.137 36.364 12.49 12.49 0.00 3.68
116 117 7.754069 TCTTACTTTGCACTTTGACAATTTG 57.246 32.000 0.00 0.00 0.00 2.32
117 118 8.770438 TTTCTTACTTTGCACTTTGACAATTT 57.230 26.923 0.00 0.00 0.00 1.82
118 119 8.819974 CATTTCTTACTTTGCACTTTGACAATT 58.180 29.630 0.00 0.00 0.00 2.32
119 120 7.439056 CCATTTCTTACTTTGCACTTTGACAAT 59.561 33.333 0.00 0.00 0.00 2.71
120 121 6.756074 CCATTTCTTACTTTGCACTTTGACAA 59.244 34.615 0.00 0.00 0.00 3.18
121 122 6.272318 CCATTTCTTACTTTGCACTTTGACA 58.728 36.000 0.00 0.00 0.00 3.58
122 123 5.175673 GCCATTTCTTACTTTGCACTTTGAC 59.824 40.000 0.00 0.00 0.00 3.18
123 124 5.163468 TGCCATTTCTTACTTTGCACTTTGA 60.163 36.000 0.00 0.00 0.00 2.69
124 125 5.049167 TGCCATTTCTTACTTTGCACTTTG 58.951 37.500 0.00 0.00 0.00 2.77
125 126 5.275067 TGCCATTTCTTACTTTGCACTTT 57.725 34.783 0.00 0.00 0.00 2.66
126 127 4.935352 TGCCATTTCTTACTTTGCACTT 57.065 36.364 0.00 0.00 0.00 3.16
127 128 4.935352 TTGCCATTTCTTACTTTGCACT 57.065 36.364 0.00 0.00 0.00 4.40
128 129 7.650834 TTATTTGCCATTTCTTACTTTGCAC 57.349 32.000 0.00 0.00 0.00 4.57
129 130 9.935241 TTATTATTTGCCATTTCTTACTTTGCA 57.065 25.926 0.00 0.00 0.00 4.08
165 166 5.729510 TGCTTTGCTTTTACCTCACTTTTT 58.270 33.333 0.00 0.00 0.00 1.94
166 167 5.337578 TGCTTTGCTTTTACCTCACTTTT 57.662 34.783 0.00 0.00 0.00 2.27
167 168 5.337578 TTGCTTTGCTTTTACCTCACTTT 57.662 34.783 0.00 0.00 0.00 2.66
168 169 5.337578 TTTGCTTTGCTTTTACCTCACTT 57.662 34.783 0.00 0.00 0.00 3.16
169 170 5.535753 ATTTGCTTTGCTTTTACCTCACT 57.464 34.783 0.00 0.00 0.00 3.41
170 171 7.707774 TTTATTTGCTTTGCTTTTACCTCAC 57.292 32.000 0.00 0.00 0.00 3.51
171 172 7.984617 ACTTTTATTTGCTTTGCTTTTACCTCA 59.015 29.630 0.00 0.00 0.00 3.86
172 173 8.365399 ACTTTTATTTGCTTTGCTTTTACCTC 57.635 30.769 0.00 0.00 0.00 3.85
173 174 9.825109 TTACTTTTATTTGCTTTGCTTTTACCT 57.175 25.926 0.00 0.00 0.00 3.08
179 180 9.599866 ACTTCTTTACTTTTATTTGCTTTGCTT 57.400 25.926 0.00 0.00 0.00 3.91
180 181 9.249457 GACTTCTTTACTTTTATTTGCTTTGCT 57.751 29.630 0.00 0.00 0.00 3.91
181 182 8.207906 CGACTTCTTTACTTTTATTTGCTTTGC 58.792 33.333 0.00 0.00 0.00 3.68
191 192 6.925165 CCCACTACACGACTTCTTTACTTTTA 59.075 38.462 0.00 0.00 0.00 1.52
354 362 3.254903 CCCTGCCTAAGTGTTTACCAAAC 59.745 47.826 0.00 0.00 41.73 2.93
355 363 3.492337 CCCTGCCTAAGTGTTTACCAAA 58.508 45.455 0.00 0.00 0.00 3.28
356 364 2.224917 CCCCTGCCTAAGTGTTTACCAA 60.225 50.000 0.00 0.00 0.00 3.67
357 365 1.353022 CCCCTGCCTAAGTGTTTACCA 59.647 52.381 0.00 0.00 0.00 3.25
358 366 1.631898 TCCCCTGCCTAAGTGTTTACC 59.368 52.381 0.00 0.00 0.00 2.85
359 367 3.428413 TTCCCCTGCCTAAGTGTTTAC 57.572 47.619 0.00 0.00 0.00 2.01
360 368 3.308832 CCATTCCCCTGCCTAAGTGTTTA 60.309 47.826 0.00 0.00 0.00 2.01
361 369 2.557452 CCATTCCCCTGCCTAAGTGTTT 60.557 50.000 0.00 0.00 0.00 2.83
362 370 1.005924 CCATTCCCCTGCCTAAGTGTT 59.994 52.381 0.00 0.00 0.00 3.32
363 371 0.625849 CCATTCCCCTGCCTAAGTGT 59.374 55.000 0.00 0.00 0.00 3.55
364 372 0.106519 CCCATTCCCCTGCCTAAGTG 60.107 60.000 0.00 0.00 0.00 3.16
365 373 0.253630 TCCCATTCCCCTGCCTAAGT 60.254 55.000 0.00 0.00 0.00 2.24
366 374 0.475906 CTCCCATTCCCCTGCCTAAG 59.524 60.000 0.00 0.00 0.00 2.18
367 375 0.253630 ACTCCCATTCCCCTGCCTAA 60.254 55.000 0.00 0.00 0.00 2.69
368 376 0.253630 AACTCCCATTCCCCTGCCTA 60.254 55.000 0.00 0.00 0.00 3.93
369 377 1.149133 AAACTCCCATTCCCCTGCCT 61.149 55.000 0.00 0.00 0.00 4.75
370 378 0.972471 CAAACTCCCATTCCCCTGCC 60.972 60.000 0.00 0.00 0.00 4.85
371 379 1.607801 GCAAACTCCCATTCCCCTGC 61.608 60.000 0.00 0.00 0.00 4.85
372 380 0.251742 TGCAAACTCCCATTCCCCTG 60.252 55.000 0.00 0.00 0.00 4.45
373 381 0.251787 GTGCAAACTCCCATTCCCCT 60.252 55.000 0.00 0.00 0.00 4.79
374 382 0.541764 TGTGCAAACTCCCATTCCCC 60.542 55.000 0.00 0.00 0.00 4.81
375 383 1.273327 CTTGTGCAAACTCCCATTCCC 59.727 52.381 0.00 0.00 0.00 3.97
376 384 1.963515 ACTTGTGCAAACTCCCATTCC 59.036 47.619 0.00 0.00 0.00 3.01
377 385 2.362077 ACACTTGTGCAAACTCCCATTC 59.638 45.455 0.10 0.00 0.00 2.67
378 386 2.101249 CACACTTGTGCAAACTCCCATT 59.899 45.455 0.10 0.00 39.39 3.16
379 387 1.682854 CACACTTGTGCAAACTCCCAT 59.317 47.619 0.10 0.00 39.39 4.00
380 388 1.102154 CACACTTGTGCAAACTCCCA 58.898 50.000 0.10 0.00 39.39 4.37
381 389 3.944871 CACACTTGTGCAAACTCCC 57.055 52.632 0.10 0.00 39.39 4.30
391 399 7.231467 ACTAATCCCTTCATAAACACACTTGT 58.769 34.615 0.00 0.00 37.67 3.16
392 400 7.390440 TGACTAATCCCTTCATAAACACACTTG 59.610 37.037 0.00 0.00 0.00 3.16
393 401 7.458397 TGACTAATCCCTTCATAAACACACTT 58.542 34.615 0.00 0.00 0.00 3.16
394 402 7.016153 TGACTAATCCCTTCATAAACACACT 57.984 36.000 0.00 0.00 0.00 3.55
395 403 7.201732 CCATGACTAATCCCTTCATAAACACAC 60.202 40.741 0.00 0.00 0.00 3.82
396 404 6.828273 CCATGACTAATCCCTTCATAAACACA 59.172 38.462 0.00 0.00 0.00 3.72
397 405 6.263168 CCCATGACTAATCCCTTCATAAACAC 59.737 42.308 0.00 0.00 0.00 3.32
398 406 6.159575 TCCCATGACTAATCCCTTCATAAACA 59.840 38.462 0.00 0.00 0.00 2.83
399 407 6.601332 TCCCATGACTAATCCCTTCATAAAC 58.399 40.000 0.00 0.00 0.00 2.01
400 408 6.840090 TCCCATGACTAATCCCTTCATAAA 57.160 37.500 0.00 0.00 0.00 1.40
401 409 6.389869 ACTTCCCATGACTAATCCCTTCATAA 59.610 38.462 0.00 0.00 0.00 1.90
402 410 5.911178 ACTTCCCATGACTAATCCCTTCATA 59.089 40.000 0.00 0.00 0.00 2.15
403 411 4.728860 ACTTCCCATGACTAATCCCTTCAT 59.271 41.667 0.00 0.00 0.00 2.57
404 412 4.111577 ACTTCCCATGACTAATCCCTTCA 58.888 43.478 0.00 0.00 0.00 3.02
405 413 4.779993 ACTTCCCATGACTAATCCCTTC 57.220 45.455 0.00 0.00 0.00 3.46
406 414 5.538877 TCTACTTCCCATGACTAATCCCTT 58.461 41.667 0.00 0.00 0.00 3.95
407 415 5.157770 TCTACTTCCCATGACTAATCCCT 57.842 43.478 0.00 0.00 0.00 4.20
408 416 6.441088 AATCTACTTCCCATGACTAATCCC 57.559 41.667 0.00 0.00 0.00 3.85
409 417 8.753497 AAAAATCTACTTCCCATGACTAATCC 57.247 34.615 0.00 0.00 0.00 3.01
412 420 9.886132 GAGTAAAAATCTACTTCCCATGACTAA 57.114 33.333 0.00 0.00 32.14 2.24
413 421 8.483758 GGAGTAAAAATCTACTTCCCATGACTA 58.516 37.037 0.00 0.00 32.14 2.59
414 422 7.339482 GGAGTAAAAATCTACTTCCCATGACT 58.661 38.462 0.00 0.00 32.14 3.41
415 423 6.542735 GGGAGTAAAAATCTACTTCCCATGAC 59.457 42.308 0.00 0.00 40.52 3.06
416 424 6.216662 TGGGAGTAAAAATCTACTTCCCATGA 59.783 38.462 5.28 0.00 44.34 3.07
417 425 6.423182 TGGGAGTAAAAATCTACTTCCCATG 58.577 40.000 5.28 0.00 44.34 3.66
418 426 6.652205 TGGGAGTAAAAATCTACTTCCCAT 57.348 37.500 5.28 0.00 44.34 4.00
419 427 6.652205 ATGGGAGTAAAAATCTACTTCCCA 57.348 37.500 11.39 11.39 44.34 4.37
420 428 6.546403 GGAATGGGAGTAAAAATCTACTTCCC 59.454 42.308 5.77 7.96 44.34 3.97
421 429 6.546403 GGGAATGGGAGTAAAAATCTACTTCC 59.454 42.308 1.66 1.66 44.96 3.46
422 430 7.347252 AGGGAATGGGAGTAAAAATCTACTTC 58.653 38.462 0.00 0.00 32.14 3.01
423 431 7.285340 AGGGAATGGGAGTAAAAATCTACTT 57.715 36.000 0.00 0.00 32.14 2.24
424 432 6.910259 AGGGAATGGGAGTAAAAATCTACT 57.090 37.500 0.00 0.00 34.76 2.57
425 433 6.890268 ACAAGGGAATGGGAGTAAAAATCTAC 59.110 38.462 0.00 0.00 0.00 2.59
426 434 7.039722 ACAAGGGAATGGGAGTAAAAATCTA 57.960 36.000 0.00 0.00 0.00 1.98
427 435 5.903923 ACAAGGGAATGGGAGTAAAAATCT 58.096 37.500 0.00 0.00 0.00 2.40
428 436 6.605471 AACAAGGGAATGGGAGTAAAAATC 57.395 37.500 0.00 0.00 0.00 2.17
429 437 6.239858 CCAAACAAGGGAATGGGAGTAAAAAT 60.240 38.462 0.00 0.00 0.00 1.82
430 438 5.071115 CCAAACAAGGGAATGGGAGTAAAAA 59.929 40.000 0.00 0.00 0.00 1.94
431 439 4.591072 CCAAACAAGGGAATGGGAGTAAAA 59.409 41.667 0.00 0.00 0.00 1.52
432 440 4.156477 CCAAACAAGGGAATGGGAGTAAA 58.844 43.478 0.00 0.00 0.00 2.01
433 441 3.141272 ACCAAACAAGGGAATGGGAGTAA 59.859 43.478 0.00 0.00 37.26 2.24
434 442 2.719705 ACCAAACAAGGGAATGGGAGTA 59.280 45.455 0.00 0.00 37.26 2.59
435 443 1.503347 ACCAAACAAGGGAATGGGAGT 59.497 47.619 0.00 0.00 37.26 3.85
436 444 2.309136 ACCAAACAAGGGAATGGGAG 57.691 50.000 0.00 0.00 37.26 4.30
437 445 5.194740 TCATATACCAAACAAGGGAATGGGA 59.805 40.000 0.00 0.00 37.26 4.37
438 446 5.454062 TCATATACCAAACAAGGGAATGGG 58.546 41.667 0.00 0.00 37.26 4.00
439 447 6.015180 CCATCATATACCAAACAAGGGAATGG 60.015 42.308 0.00 0.00 38.91 3.16
440 448 6.015180 CCCATCATATACCAAACAAGGGAATG 60.015 42.308 0.00 0.00 34.49 2.67
441 449 6.077322 CCCATCATATACCAAACAAGGGAAT 58.923 40.000 0.00 0.00 34.49 3.01
442 450 5.194740 TCCCATCATATACCAAACAAGGGAA 59.805 40.000 0.00 0.00 38.56 3.97
443 451 4.729370 TCCCATCATATACCAAACAAGGGA 59.271 41.667 0.00 0.00 39.16 4.20
444 452 5.060427 TCCCATCATATACCAAACAAGGG 57.940 43.478 0.00 0.00 0.00 3.95
445 453 7.601705 AATTCCCATCATATACCAAACAAGG 57.398 36.000 0.00 0.00 0.00 3.61
446 454 8.299570 GCTAATTCCCATCATATACCAAACAAG 58.700 37.037 0.00 0.00 0.00 3.16
447 455 7.040755 CGCTAATTCCCATCATATACCAAACAA 60.041 37.037 0.00 0.00 0.00 2.83
448 456 6.429692 CGCTAATTCCCATCATATACCAAACA 59.570 38.462 0.00 0.00 0.00 2.83
449 457 6.430000 ACGCTAATTCCCATCATATACCAAAC 59.570 38.462 0.00 0.00 0.00 2.93
450 458 6.429692 CACGCTAATTCCCATCATATACCAAA 59.570 38.462 0.00 0.00 0.00 3.28
451 459 5.937540 CACGCTAATTCCCATCATATACCAA 59.062 40.000 0.00 0.00 0.00 3.67
452 460 5.487433 CACGCTAATTCCCATCATATACCA 58.513 41.667 0.00 0.00 0.00 3.25
453 461 4.876107 CCACGCTAATTCCCATCATATACC 59.124 45.833 0.00 0.00 0.00 2.73
454 462 4.876107 CCCACGCTAATTCCCATCATATAC 59.124 45.833 0.00 0.00 0.00 1.47
455 463 4.780554 TCCCACGCTAATTCCCATCATATA 59.219 41.667 0.00 0.00 0.00 0.86
456 464 3.587061 TCCCACGCTAATTCCCATCATAT 59.413 43.478 0.00 0.00 0.00 1.78
457 465 2.976185 TCCCACGCTAATTCCCATCATA 59.024 45.455 0.00 0.00 0.00 2.15
458 466 1.774254 TCCCACGCTAATTCCCATCAT 59.226 47.619 0.00 0.00 0.00 2.45
459 467 1.208706 TCCCACGCTAATTCCCATCA 58.791 50.000 0.00 0.00 0.00 3.07
460 468 2.568623 ATCCCACGCTAATTCCCATC 57.431 50.000 0.00 0.00 0.00 3.51
461 469 4.447138 TTTATCCCACGCTAATTCCCAT 57.553 40.909 0.00 0.00 0.00 4.00
462 470 3.935818 TTTATCCCACGCTAATTCCCA 57.064 42.857 0.00 0.00 0.00 4.37
463 471 4.204799 AGTTTTATCCCACGCTAATTCCC 58.795 43.478 0.00 0.00 0.00 3.97
464 472 5.007724 CAGAGTTTTATCCCACGCTAATTCC 59.992 44.000 0.00 0.00 0.00 3.01
465 473 5.504173 GCAGAGTTTTATCCCACGCTAATTC 60.504 44.000 0.00 0.00 0.00 2.17
466 474 4.335594 GCAGAGTTTTATCCCACGCTAATT 59.664 41.667 0.00 0.00 0.00 1.40
467 475 3.877508 GCAGAGTTTTATCCCACGCTAAT 59.122 43.478 0.00 0.00 0.00 1.73
468 476 3.055385 AGCAGAGTTTTATCCCACGCTAA 60.055 43.478 0.00 0.00 0.00 3.09
469 477 2.500098 AGCAGAGTTTTATCCCACGCTA 59.500 45.455 0.00 0.00 0.00 4.26
470 478 1.279271 AGCAGAGTTTTATCCCACGCT 59.721 47.619 0.00 0.00 0.00 5.07
471 479 1.666189 GAGCAGAGTTTTATCCCACGC 59.334 52.381 0.00 0.00 0.00 5.34
472 480 2.673368 GTGAGCAGAGTTTTATCCCACG 59.327 50.000 0.00 0.00 0.00 4.94
473 481 2.673368 CGTGAGCAGAGTTTTATCCCAC 59.327 50.000 0.00 0.00 0.00 4.61
474 482 2.565391 TCGTGAGCAGAGTTTTATCCCA 59.435 45.455 0.00 0.00 0.00 4.37
475 483 3.247006 TCGTGAGCAGAGTTTTATCCC 57.753 47.619 0.00 0.00 0.00 3.85
476 484 5.803020 AATTCGTGAGCAGAGTTTTATCC 57.197 39.130 0.00 0.00 0.00 2.59
477 485 7.739295 TGTTAATTCGTGAGCAGAGTTTTATC 58.261 34.615 0.00 0.00 0.00 1.75
478 486 7.148407 CCTGTTAATTCGTGAGCAGAGTTTTAT 60.148 37.037 0.00 0.00 0.00 1.40
479 487 6.147164 CCTGTTAATTCGTGAGCAGAGTTTTA 59.853 38.462 0.00 0.00 0.00 1.52
480 488 5.049405 CCTGTTAATTCGTGAGCAGAGTTTT 60.049 40.000 0.00 0.00 0.00 2.43
481 489 4.452455 CCTGTTAATTCGTGAGCAGAGTTT 59.548 41.667 0.00 0.00 0.00 2.66
482 490 3.997021 CCTGTTAATTCGTGAGCAGAGTT 59.003 43.478 0.00 0.00 0.00 3.01
483 491 3.589988 CCTGTTAATTCGTGAGCAGAGT 58.410 45.455 0.00 0.00 0.00 3.24
484 492 2.932614 CCCTGTTAATTCGTGAGCAGAG 59.067 50.000 0.00 0.00 0.00 3.35
485 493 2.301870 ACCCTGTTAATTCGTGAGCAGA 59.698 45.455 0.00 0.00 0.00 4.26
486 494 2.699954 ACCCTGTTAATTCGTGAGCAG 58.300 47.619 0.00 0.00 0.00 4.24
487 495 2.851263 ACCCTGTTAATTCGTGAGCA 57.149 45.000 0.00 0.00 0.00 4.26
488 496 2.934553 GGTACCCTGTTAATTCGTGAGC 59.065 50.000 0.00 0.00 0.00 4.26
505 513 3.118000 CACCTATTTCTTCCCAGGGGTAC 60.118 52.174 5.33 0.00 36.47 3.34
506 514 3.120108 CACCTATTTCTTCCCAGGGGTA 58.880 50.000 5.33 0.00 36.47 3.69
507 515 1.923148 CACCTATTTCTTCCCAGGGGT 59.077 52.381 5.33 0.00 36.47 4.95
508 516 1.215423 CCACCTATTTCTTCCCAGGGG 59.785 57.143 5.33 0.92 32.12 4.79
509 517 1.215423 CCCACCTATTTCTTCCCAGGG 59.785 57.143 0.00 0.00 32.12 4.45
510 518 2.205342 TCCCACCTATTTCTTCCCAGG 58.795 52.381 0.00 0.00 0.00 4.45
511 519 4.526438 ATTCCCACCTATTTCTTCCCAG 57.474 45.455 0.00 0.00 0.00 4.45
512 520 4.571792 CCAATTCCCACCTATTTCTTCCCA 60.572 45.833 0.00 0.00 0.00 4.37
513 521 3.960755 CCAATTCCCACCTATTTCTTCCC 59.039 47.826 0.00 0.00 0.00 3.97
514 522 3.384789 GCCAATTCCCACCTATTTCTTCC 59.615 47.826 0.00 0.00 0.00 3.46
515 523 4.281657 AGCCAATTCCCACCTATTTCTTC 58.718 43.478 0.00 0.00 0.00 2.87
516 524 4.337264 AGCCAATTCCCACCTATTTCTT 57.663 40.909 0.00 0.00 0.00 2.52
517 525 4.281657 GAAGCCAATTCCCACCTATTTCT 58.718 43.478 0.00 0.00 31.14 2.52
518 526 4.655762 GAAGCCAATTCCCACCTATTTC 57.344 45.455 0.00 0.00 31.14 2.17
529 537 2.095461 GGGAGTTGAGGAAGCCAATTC 58.905 52.381 0.00 0.00 37.17 2.17
530 538 1.428912 TGGGAGTTGAGGAAGCCAATT 59.571 47.619 0.00 0.00 0.00 2.32
531 539 1.075601 TGGGAGTTGAGGAAGCCAAT 58.924 50.000 0.00 0.00 0.00 3.16
532 540 1.075601 ATGGGAGTTGAGGAAGCCAA 58.924 50.000 0.00 0.00 0.00 4.52
533 541 1.004745 GAATGGGAGTTGAGGAAGCCA 59.995 52.381 0.00 0.00 0.00 4.75
534 542 1.683319 GGAATGGGAGTTGAGGAAGCC 60.683 57.143 0.00 0.00 0.00 4.35
535 543 1.683319 GGGAATGGGAGTTGAGGAAGC 60.683 57.143 0.00 0.00 0.00 3.86
536 544 1.064389 GGGGAATGGGAGTTGAGGAAG 60.064 57.143 0.00 0.00 0.00 3.46
537 545 0.999712 GGGGAATGGGAGTTGAGGAA 59.000 55.000 0.00 0.00 0.00 3.36
538 546 0.121197 AGGGGAATGGGAGTTGAGGA 59.879 55.000 0.00 0.00 0.00 3.71
539 547 1.002857 AAGGGGAATGGGAGTTGAGG 58.997 55.000 0.00 0.00 0.00 3.86
540 548 1.064389 GGAAGGGGAATGGGAGTTGAG 60.064 57.143 0.00 0.00 0.00 3.02
541 549 0.999712 GGAAGGGGAATGGGAGTTGA 59.000 55.000 0.00 0.00 0.00 3.18
542 550 1.002857 AGGAAGGGGAATGGGAGTTG 58.997 55.000 0.00 0.00 0.00 3.16
543 551 1.002857 CAGGAAGGGGAATGGGAGTT 58.997 55.000 0.00 0.00 0.00 3.01
544 552 1.575447 GCAGGAAGGGGAATGGGAGT 61.575 60.000 0.00 0.00 0.00 3.85
545 553 1.228510 GCAGGAAGGGGAATGGGAG 59.771 63.158 0.00 0.00 0.00 4.30
546 554 0.850883 AAGCAGGAAGGGGAATGGGA 60.851 55.000 0.00 0.00 0.00 4.37
547 555 0.926293 TAAGCAGGAAGGGGAATGGG 59.074 55.000 0.00 0.00 0.00 4.00
548 556 2.760650 GTTTAAGCAGGAAGGGGAATGG 59.239 50.000 0.00 0.00 0.00 3.16
549 557 3.696548 GAGTTTAAGCAGGAAGGGGAATG 59.303 47.826 0.00 0.00 0.00 2.67
550 558 3.593780 AGAGTTTAAGCAGGAAGGGGAAT 59.406 43.478 0.00 0.00 0.00 3.01
551 559 2.986728 AGAGTTTAAGCAGGAAGGGGAA 59.013 45.455 0.00 0.00 0.00 3.97
552 560 2.572104 GAGAGTTTAAGCAGGAAGGGGA 59.428 50.000 0.00 0.00 0.00 4.81
553 561 2.305927 TGAGAGTTTAAGCAGGAAGGGG 59.694 50.000 0.00 0.00 0.00 4.79
554 562 3.703001 TGAGAGTTTAAGCAGGAAGGG 57.297 47.619 0.00 0.00 0.00 3.95
555 563 4.637977 GGAATGAGAGTTTAAGCAGGAAGG 59.362 45.833 0.00 0.00 0.00 3.46
556 564 4.637977 GGGAATGAGAGTTTAAGCAGGAAG 59.362 45.833 0.00 0.00 0.00 3.46
557 565 4.289672 AGGGAATGAGAGTTTAAGCAGGAA 59.710 41.667 0.00 0.00 0.00 3.36
558 566 3.846588 AGGGAATGAGAGTTTAAGCAGGA 59.153 43.478 0.00 0.00 0.00 3.86
559 567 4.080638 AGAGGGAATGAGAGTTTAAGCAGG 60.081 45.833 0.00 0.00 0.00 4.85
560 568 5.096443 AGAGGGAATGAGAGTTTAAGCAG 57.904 43.478 0.00 0.00 0.00 4.24
561 569 6.620877 TTAGAGGGAATGAGAGTTTAAGCA 57.379 37.500 0.00 0.00 0.00 3.91
562 570 7.275920 TGATTAGAGGGAATGAGAGTTTAAGC 58.724 38.462 0.00 0.00 0.00 3.09
563 571 9.672673 TTTGATTAGAGGGAATGAGAGTTTAAG 57.327 33.333 0.00 0.00 0.00 1.85
564 572 9.449719 GTTTGATTAGAGGGAATGAGAGTTTAA 57.550 33.333 0.00 0.00 0.00 1.52
565 573 8.602424 TGTTTGATTAGAGGGAATGAGAGTTTA 58.398 33.333 0.00 0.00 0.00 2.01
566 574 7.461749 TGTTTGATTAGAGGGAATGAGAGTTT 58.538 34.615 0.00 0.00 0.00 2.66
567 575 7.020827 TGTTTGATTAGAGGGAATGAGAGTT 57.979 36.000 0.00 0.00 0.00 3.01
568 576 6.214412 ACTGTTTGATTAGAGGGAATGAGAGT 59.786 38.462 0.00 0.00 0.00 3.24
569 577 6.538021 CACTGTTTGATTAGAGGGAATGAGAG 59.462 42.308 0.00 0.00 0.00 3.20
570 578 6.409704 CACTGTTTGATTAGAGGGAATGAGA 58.590 40.000 0.00 0.00 0.00 3.27
571 579 5.587844 CCACTGTTTGATTAGAGGGAATGAG 59.412 44.000 0.00 0.00 0.00 2.90
572 580 5.250543 TCCACTGTTTGATTAGAGGGAATGA 59.749 40.000 0.00 0.00 0.00 2.57
573 581 5.355350 GTCCACTGTTTGATTAGAGGGAATG 59.645 44.000 0.00 0.00 0.00 2.67
574 582 5.251700 AGTCCACTGTTTGATTAGAGGGAAT 59.748 40.000 0.00 0.00 0.00 3.01
575 583 4.597507 AGTCCACTGTTTGATTAGAGGGAA 59.402 41.667 0.00 0.00 0.00 3.97
576 584 4.168101 AGTCCACTGTTTGATTAGAGGGA 58.832 43.478 0.00 0.00 0.00 4.20
577 585 4.559862 AGTCCACTGTTTGATTAGAGGG 57.440 45.455 0.00 0.00 0.00 4.30
578 586 6.884280 AAAAGTCCACTGTTTGATTAGAGG 57.116 37.500 0.00 0.00 0.00 3.69
580 588 9.793259 AGATTAAAAGTCCACTGTTTGATTAGA 57.207 29.630 0.00 0.00 0.00 2.10
582 590 9.010029 GGAGATTAAAAGTCCACTGTTTGATTA 57.990 33.333 0.00 0.00 0.00 1.75
583 591 7.725844 AGGAGATTAAAAGTCCACTGTTTGATT 59.274 33.333 4.45 0.00 32.23 2.57
584 592 7.234355 AGGAGATTAAAAGTCCACTGTTTGAT 58.766 34.615 4.45 0.00 32.23 2.57
585 593 6.601332 AGGAGATTAAAAGTCCACTGTTTGA 58.399 36.000 4.45 0.00 32.23 2.69
586 594 6.486657 TGAGGAGATTAAAAGTCCACTGTTTG 59.513 38.462 4.45 0.00 32.23 2.93
587 595 6.486993 GTGAGGAGATTAAAAGTCCACTGTTT 59.513 38.462 4.45 0.00 32.23 2.83
588 596 5.998363 GTGAGGAGATTAAAAGTCCACTGTT 59.002 40.000 4.45 0.00 32.23 3.16
589 597 5.513267 GGTGAGGAGATTAAAAGTCCACTGT 60.513 44.000 0.00 0.00 32.23 3.55
590 598 4.938226 GGTGAGGAGATTAAAAGTCCACTG 59.062 45.833 0.00 0.00 32.23 3.66
591 599 4.019231 GGGTGAGGAGATTAAAAGTCCACT 60.019 45.833 0.00 0.00 32.23 4.00
592 600 4.262617 GGGTGAGGAGATTAAAAGTCCAC 58.737 47.826 4.45 0.00 32.23 4.02
593 601 3.265995 GGGGTGAGGAGATTAAAAGTCCA 59.734 47.826 4.45 0.00 32.23 4.02
594 602 3.523972 AGGGGTGAGGAGATTAAAAGTCC 59.476 47.826 0.00 0.00 0.00 3.85
595 603 4.225267 TGAGGGGTGAGGAGATTAAAAGTC 59.775 45.833 0.00 0.00 0.00 3.01
596 604 4.175962 TGAGGGGTGAGGAGATTAAAAGT 58.824 43.478 0.00 0.00 0.00 2.66
597 605 4.844349 TGAGGGGTGAGGAGATTAAAAG 57.156 45.455 0.00 0.00 0.00 2.27
598 606 4.601857 AGTTGAGGGGTGAGGAGATTAAAA 59.398 41.667 0.00 0.00 0.00 1.52
599 607 4.175962 AGTTGAGGGGTGAGGAGATTAAA 58.824 43.478 0.00 0.00 0.00 1.52
600 608 3.775316 GAGTTGAGGGGTGAGGAGATTAA 59.225 47.826 0.00 0.00 0.00 1.40
601 609 3.375699 GAGTTGAGGGGTGAGGAGATTA 58.624 50.000 0.00 0.00 0.00 1.75
602 610 2.192263 GAGTTGAGGGGTGAGGAGATT 58.808 52.381 0.00 0.00 0.00 2.40
603 611 1.623834 GGAGTTGAGGGGTGAGGAGAT 60.624 57.143 0.00 0.00 0.00 2.75
604 612 0.252284 GGAGTTGAGGGGTGAGGAGA 60.252 60.000 0.00 0.00 0.00 3.71
605 613 1.268283 GGGAGTTGAGGGGTGAGGAG 61.268 65.000 0.00 0.00 0.00 3.69
606 614 1.229529 GGGAGTTGAGGGGTGAGGA 60.230 63.158 0.00 0.00 0.00 3.71
607 615 0.916358 ATGGGAGTTGAGGGGTGAGG 60.916 60.000 0.00 0.00 0.00 3.86
608 616 0.995024 AATGGGAGTTGAGGGGTGAG 59.005 55.000 0.00 0.00 0.00 3.51
609 617 0.991920 GAATGGGAGTTGAGGGGTGA 59.008 55.000 0.00 0.00 0.00 4.02
610 618 0.034089 GGAATGGGAGTTGAGGGGTG 60.034 60.000 0.00 0.00 0.00 4.61
611 619 1.214992 GGGAATGGGAGTTGAGGGGT 61.215 60.000 0.00 0.00 0.00 4.95
612 620 1.615262 GGGAATGGGAGTTGAGGGG 59.385 63.158 0.00 0.00 0.00 4.79
613 621 1.214305 TGGGGAATGGGAGTTGAGGG 61.214 60.000 0.00 0.00 0.00 4.30
614 622 0.929244 ATGGGGAATGGGAGTTGAGG 59.071 55.000 0.00 0.00 0.00 3.86
615 623 1.849039 AGATGGGGAATGGGAGTTGAG 59.151 52.381 0.00 0.00 0.00 3.02
616 624 1.846439 GAGATGGGGAATGGGAGTTGA 59.154 52.381 0.00 0.00 0.00 3.18
617 625 1.475751 CGAGATGGGGAATGGGAGTTG 60.476 57.143 0.00 0.00 0.00 3.16
618 626 0.839946 CGAGATGGGGAATGGGAGTT 59.160 55.000 0.00 0.00 0.00 3.01
619 627 0.031111 TCGAGATGGGGAATGGGAGT 60.031 55.000 0.00 0.00 0.00 3.85
620 628 1.131638 TTCGAGATGGGGAATGGGAG 58.868 55.000 0.00 0.00 0.00 4.30
621 629 1.819753 ATTCGAGATGGGGAATGGGA 58.180 50.000 0.00 0.00 31.95 4.37
622 630 2.508526 GAATTCGAGATGGGGAATGGG 58.491 52.381 0.00 0.00 33.40 4.00
623 631 2.508526 GGAATTCGAGATGGGGAATGG 58.491 52.381 0.00 0.00 33.40 3.16
624 632 2.508526 GGGAATTCGAGATGGGGAATG 58.491 52.381 0.00 0.00 33.40 2.67
625 633 1.425448 GGGGAATTCGAGATGGGGAAT 59.575 52.381 0.00 0.00 34.48 3.01
626 634 0.843984 GGGGAATTCGAGATGGGGAA 59.156 55.000 0.00 0.00 0.00 3.97
627 635 1.060163 GGGGGAATTCGAGATGGGGA 61.060 60.000 0.00 0.00 0.00 4.81
628 636 1.456287 GGGGGAATTCGAGATGGGG 59.544 63.158 0.00 0.00 0.00 4.96
629 637 1.071471 CGGGGGAATTCGAGATGGG 59.929 63.158 0.00 0.00 0.00 4.00
630 638 0.468226 TTCGGGGGAATTCGAGATGG 59.532 55.000 0.00 0.00 36.72 3.51
631 639 1.583054 GTTCGGGGGAATTCGAGATG 58.417 55.000 0.00 0.00 36.72 2.90
632 640 0.468648 GGTTCGGGGGAATTCGAGAT 59.531 55.000 0.00 0.00 36.72 2.75
633 641 0.905809 TGGTTCGGGGGAATTCGAGA 60.906 55.000 0.00 0.00 36.72 4.04
634 642 0.035820 TTGGTTCGGGGGAATTCGAG 60.036 55.000 0.00 0.00 36.72 4.04
635 643 0.400975 TTTGGTTCGGGGGAATTCGA 59.599 50.000 0.00 0.00 0.00 3.71
636 644 0.524414 GTTTGGTTCGGGGGAATTCG 59.476 55.000 0.00 0.00 0.00 3.34
637 645 1.271379 GTGTTTGGTTCGGGGGAATTC 59.729 52.381 0.00 0.00 0.00 2.17
638 646 1.334160 GTGTTTGGTTCGGGGGAATT 58.666 50.000 0.00 0.00 0.00 2.17
639 647 0.891904 CGTGTTTGGTTCGGGGGAAT 60.892 55.000 0.00 0.00 0.00 3.01
640 648 1.526455 CGTGTTTGGTTCGGGGGAA 60.526 57.895 0.00 0.00 0.00 3.97
641 649 2.111460 CGTGTTTGGTTCGGGGGA 59.889 61.111 0.00 0.00 0.00 4.81
642 650 3.666253 GCGTGTTTGGTTCGGGGG 61.666 66.667 0.00 0.00 0.00 5.40
643 651 2.593436 AGCGTGTTTGGTTCGGGG 60.593 61.111 0.00 0.00 0.00 5.73
644 652 0.881159 TACAGCGTGTTTGGTTCGGG 60.881 55.000 0.00 0.00 0.00 5.14
645 653 0.938713 TTACAGCGTGTTTGGTTCGG 59.061 50.000 0.00 0.00 0.00 4.30
646 654 1.070175 CCTTACAGCGTGTTTGGTTCG 60.070 52.381 0.00 0.00 0.00 3.95
647 655 2.215196 TCCTTACAGCGTGTTTGGTTC 58.785 47.619 0.00 0.00 0.00 3.62
648 656 2.335316 TCCTTACAGCGTGTTTGGTT 57.665 45.000 0.00 0.00 0.00 3.67
649 657 2.561478 ATCCTTACAGCGTGTTTGGT 57.439 45.000 0.00 0.00 0.00 3.67
650 658 3.365969 GGAAATCCTTACAGCGTGTTTGG 60.366 47.826 0.00 1.03 0.00 3.28
651 659 3.502211 AGGAAATCCTTACAGCGTGTTTG 59.498 43.478 0.00 0.00 46.09 2.93
652 660 3.751518 AGGAAATCCTTACAGCGTGTTT 58.248 40.909 0.00 0.00 46.09 2.83
653 661 3.418684 AGGAAATCCTTACAGCGTGTT 57.581 42.857 0.00 0.00 46.09 3.32
685 693 4.142447 GGGGAGCGGTTTATTTTTCTTCTC 60.142 45.833 0.00 0.00 0.00 2.87
975 988 2.786854 CTGACGACTATGTTGGAGACG 58.213 52.381 0.00 0.00 37.94 4.18
1052 1110 0.460109 CTTCATGTCCATGTCGGCGA 60.460 55.000 4.99 4.99 39.72 5.54
1330 1395 1.305297 TGTCGAGGGAGGAGCACAT 60.305 57.895 0.00 0.00 0.00 3.21
1434 1523 3.010413 GCCAATGCCAACAGGAGCC 62.010 63.158 0.00 0.00 0.00 4.70
1536 1625 2.228059 GTATGTAGGAGCACTCGCCTA 58.772 52.381 0.00 0.00 42.72 3.93
1617 1706 1.521681 GAGCATGCTCCGGTGGTAC 60.522 63.158 33.31 8.92 37.11 3.34
1666 1755 2.298729 TGACGATGATGTTGGTGACAGA 59.701 45.455 0.00 0.00 42.62 3.41
1865 1954 2.892640 CGGCCAAGTCGAGATCCA 59.107 61.111 2.24 0.00 29.41 3.41
1873 1962 2.556287 CTTTGTCGCGGCCAAGTC 59.444 61.111 15.76 0.00 0.00 3.01
1956 2045 4.731853 TGGGCATCGGGTCTGGGA 62.732 66.667 0.00 0.00 0.00 4.37
1974 2063 2.295885 CATGAACTGAGGAATCCTGCC 58.704 52.381 6.50 0.00 31.76 4.85
2001 2102 2.037772 CAGCAGTAACAGGACTTCAGGT 59.962 50.000 0.00 0.00 0.00 4.00
2015 2116 2.705658 CCCCCATTATCTGACAGCAGTA 59.294 50.000 0.00 0.00 42.84 2.74
2144 2248 3.487544 GCTAAGATTGAATGCCCGTTCAC 60.488 47.826 2.57 0.00 37.80 3.18
2154 2258 5.131642 TCCCTCTGACATGCTAAGATTGAAT 59.868 40.000 0.00 0.00 0.00 2.57
2431 2903 6.817765 TGTTTTGATCAAGTAGGCCTTTAG 57.182 37.500 12.58 0.00 0.00 1.85
2474 3465 2.592861 GCATCCATGGAGGTCGGC 60.593 66.667 26.18 16.61 39.02 5.54
2517 3636 3.053395 AGGGGAAGCTCTAAATCATGCAA 60.053 43.478 0.00 0.00 0.00 4.08
2528 3647 5.654209 GTCATTCAAATTAAGGGGAAGCTCT 59.346 40.000 0.00 0.00 0.00 4.09
2551 3808 1.242076 GAGCAAATCAGCAGGTGTGT 58.758 50.000 0.00 0.00 36.85 3.72
2604 3865 1.769098 CGCAGATCACATGAAGCCGG 61.769 60.000 0.00 0.00 0.00 6.13
2606 3867 0.745845 ACCGCAGATCACATGAAGCC 60.746 55.000 0.00 0.00 0.00 4.35
2673 3958 3.311596 TGTGATGGTAGTAGTCATCGTCG 59.688 47.826 8.19 0.00 41.78 5.12
2676 3961 6.313744 TGTATGTGATGGTAGTAGTCATCG 57.686 41.667 8.19 0.00 41.78 3.84
2720 4005 1.958288 ACCTACAGAGCCAACATCCT 58.042 50.000 0.00 0.00 0.00 3.24
3356 5111 3.450578 TCCAGTTCGTAACATAATCGCC 58.549 45.455 0.00 0.00 0.00 5.54
3553 5324 5.134339 AGACCTGCCCAATATAAATGGAAGA 59.866 40.000 9.02 0.00 40.56 2.87
3559 5330 6.266131 TCAGAAGACCTGCCCAATATAAAT 57.734 37.500 0.00 0.00 42.62 1.40
3587 5358 3.826157 CCTGAAGCTTGGTTTTATCACCA 59.174 43.478 2.10 0.00 45.68 4.17
3606 5377 1.372087 GGCTGATTGACCGCTTCCTG 61.372 60.000 0.00 0.00 0.00 3.86
3624 5395 1.009903 TACGTCACAATCGCCAACGG 61.010 55.000 0.00 0.00 40.63 4.44
3627 5404 2.665649 AGATACGTCACAATCGCCAA 57.334 45.000 0.00 0.00 0.00 4.52
3635 5418 1.616374 TGACCAGCAAGATACGTCACA 59.384 47.619 0.00 0.00 0.00 3.58
3643 5426 0.251354 ACGCATCTGACCAGCAAGAT 59.749 50.000 0.00 0.00 0.00 2.40
3644 5427 0.671472 CACGCATCTGACCAGCAAGA 60.671 55.000 0.00 0.00 0.00 3.02
3691 5474 0.401356 TGCTTGATCACCAGCTCCAA 59.599 50.000 17.93 0.00 0.00 3.53
3707 5490 2.304180 AGCAATACACAAGACTCCTGCT 59.696 45.455 0.00 0.00 34.19 4.24
3709 5492 3.930336 TCAGCAATACACAAGACTCCTG 58.070 45.455 0.00 0.00 0.00 3.86
3791 5583 6.537453 ACAGTAGAGTTCAATGCACTAGAT 57.463 37.500 0.00 0.00 0.00 1.98
3924 5726 9.583765 AACCGAGATATTTAGTTCTTACAAGAC 57.416 33.333 0.00 0.00 34.13 3.01
3958 5760 3.708451 ACAAACAGTTTCCCTTTCCAGT 58.292 40.909 0.00 0.00 0.00 4.00
3959 5761 4.736126 AACAAACAGTTTCCCTTTCCAG 57.264 40.909 0.00 0.00 37.03 3.86
4011 6102 0.745845 CCATGTCTTTCTGCTCCGGG 60.746 60.000 0.00 0.00 0.00 5.73
4014 6105 2.295885 CATCCCATGTCTTTCTGCTCC 58.704 52.381 0.00 0.00 0.00 4.70
4015 6106 1.674962 GCATCCCATGTCTTTCTGCTC 59.325 52.381 0.00 0.00 0.00 4.26
4017 6108 1.674962 GAGCATCCCATGTCTTTCTGC 59.325 52.381 0.00 0.00 0.00 4.26
4042 7338 9.783256 GGTTTAGCTGTGTTATTACCTTATTTG 57.217 33.333 0.00 0.00 0.00 2.32
4269 7936 1.373570 CGGAAACAAGCTCTGGGATC 58.626 55.000 0.00 0.00 0.00 3.36
4391 8058 6.644191 CATTTGTCAATGTTTCACACACAA 57.356 33.333 0.00 0.00 38.61 3.33


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.