Multiple sequence alignment - TraesCS5D01G037300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G037300 chr5D 100.000 6372 0 0 1 6372 36476279 36482650 0.000000e+00 11767.0
1 TraesCS5D01G037300 chr5D 87.273 165 3 10 5800 5963 36545441 36545588 8.490000e-39 172.0
2 TraesCS5D01G037300 chr5D 97.674 43 0 1 5949 5991 36545607 36545648 8.860000e-09 73.1
3 TraesCS5D01G037300 chr5B 95.039 2318 92 12 1412 3714 27295470 27297779 0.000000e+00 3622.0
4 TraesCS5D01G037300 chr5B 90.127 1418 103 16 1 1397 27294015 27295416 0.000000e+00 1808.0
5 TraesCS5D01G037300 chr5B 93.268 1114 47 9 3752 4842 27297779 27298887 0.000000e+00 1616.0
6 TraesCS5D01G037300 chr5B 78.696 859 101 39 5167 5991 27299210 27300020 1.230000e-136 497.0
7 TraesCS5D01G037300 chr5B 81.868 364 47 11 4797 5146 27298884 27299242 8.080000e-74 289.0
8 TraesCS5D01G037300 chr5B 82.443 262 17 15 5731 5991 27362140 27362373 1.080000e-47 202.0
9 TraesCS5D01G037300 chr5B 89.815 108 9 1 6045 6150 27300129 27300236 3.100000e-28 137.0
10 TraesCS5D01G037300 chr5A 96.988 2158 52 10 1412 3563 25700412 25702562 0.000000e+00 3613.0
11 TraesCS5D01G037300 chr5A 93.252 1482 63 9 3714 5169 25702557 25704027 0.000000e+00 2148.0
12 TraesCS5D01G037300 chr5A 88.353 996 45 21 551 1513 25699351 25700308 0.000000e+00 1131.0
13 TraesCS5D01G037300 chr5A 83.217 858 83 37 5155 5991 25704051 25704868 0.000000e+00 730.0
14 TraesCS5D01G037300 chr5A 100.000 68 0 0 1330 1397 25700290 25700357 6.710000e-25 126.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G037300 chr5D 36476279 36482650 6371 False 11767.000000 11767 100.0000 1 6372 1 chr5D.!!$F1 6371
1 TraesCS5D01G037300 chr5B 27294015 27300236 6221 False 1328.166667 3622 88.1355 1 6150 6 chr5B.!!$F2 6149
2 TraesCS5D01G037300 chr5A 25699351 25704868 5517 False 1549.600000 3613 92.3620 551 5991 5 chr5A.!!$F1 5440

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
171 174 0.108377 GCATTTCGGCCGGGATTTTT 60.108 50.000 27.83 0.17 0.00 1.94 F
347 366 0.458260 GGGTGCGGTTTTCTGTGTTT 59.542 50.000 0.00 0.00 0.00 2.83 F
397 416 0.461339 TCGGCCGCAACTTTATCCTC 60.461 55.000 23.51 0.00 0.00 3.71 F
603 622 1.006571 GCGAGGAGTGTCACCGAAA 60.007 57.895 0.00 0.00 0.00 3.46 F
1554 1806 1.280133 GTCCTTTAAGGCCTAACGGGT 59.720 52.381 5.16 0.00 34.61 5.28 F
1918 2172 2.040813 ACCTCAATTCACTGCCACTGAT 59.959 45.455 0.00 0.00 0.00 2.90 F
3076 3333 0.180406 CCTAAGTGCCCAACGCCTAT 59.820 55.000 0.00 0.00 36.24 2.57 F
4821 5119 0.181350 AGCCATCGGATCAAACCTCC 59.819 55.000 0.00 0.00 0.00 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2123 2377 0.102844 GCAGCAGAGCTCCTCTACAG 59.897 60.000 10.93 0.0 38.99 2.74 R
2208 2462 2.863704 GCCAATGGTTCAGTTTGCACTC 60.864 50.000 0.00 0.0 0.00 3.51 R
2300 2554 4.883585 TGCTCGAAAGGCTGATTGAATAAT 59.116 37.500 0.00 0.0 0.00 1.28 R
2517 2772 5.085920 AGTTCACATGAATCCCATTTTCCA 58.914 37.500 0.00 0.0 36.33 3.53 R
2843 3100 2.351738 GGCAATTGGTTCTTTGTCCTCG 60.352 50.000 7.72 0.0 0.00 4.63 R
3621 3894 1.988107 TGCAAGAGAAGGGTGGAAGAT 59.012 47.619 0.00 0.0 0.00 2.40 R
4857 5197 1.259609 TCGGATTACTTGTGGACCGT 58.740 50.000 0.00 0.0 40.93 4.83 R
6287 6777 0.107945 AGAGCCAAATCTGGTCGCTC 60.108 55.000 0.00 0.0 45.53 5.03 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 5.621104 CGATAATGGATGCTGTCTCTAGGTC 60.621 48.000 0.00 0.00 0.00 3.85
34 36 1.405105 GCTGTCTCTAGGTCTCTGCTG 59.595 57.143 0.00 0.00 0.00 4.41
44 46 4.099170 CTCTGCTGCTTGGCGTGC 62.099 66.667 0.00 0.00 34.52 5.34
45 47 4.933563 TCTGCTGCTTGGCGTGCA 62.934 61.111 0.00 4.28 38.01 4.57
46 48 3.744719 CTGCTGCTTGGCGTGCAT 61.745 61.111 0.00 0.00 39.09 3.96
54 56 1.134946 GCTTGGCGTGCATAGGATTTT 59.865 47.619 0.00 0.00 0.00 1.82
71 74 3.975479 TTTTGTAGGACCTTTTGGGGA 57.025 42.857 0.00 0.00 46.08 4.81
84 87 0.404040 TTGGGGAGCCAGTTCGATTT 59.596 50.000 0.00 0.00 0.00 2.17
85 88 0.404040 TGGGGAGCCAGTTCGATTTT 59.596 50.000 0.00 0.00 0.00 1.82
97 100 0.250553 TCGATTTTTGCTGGGACGGT 60.251 50.000 0.00 0.00 36.83 4.83
98 101 0.596082 CGATTTTTGCTGGGACGGTT 59.404 50.000 0.00 0.00 36.83 4.44
146 149 0.889186 GTGACCCAATCCGTGTGCTT 60.889 55.000 0.00 0.00 0.00 3.91
147 150 0.179004 TGACCCAATCCGTGTGCTTT 60.179 50.000 0.00 0.00 0.00 3.51
171 174 0.108377 GCATTTCGGCCGGGATTTTT 60.108 50.000 27.83 0.17 0.00 1.94
191 194 2.207229 GGTGTCTTTGGGGTTGGGC 61.207 63.158 0.00 0.00 0.00 5.36
197 200 3.387609 TTTGGGGTTGGGCTGCTGT 62.388 57.895 0.00 0.00 0.00 4.40
198 201 2.012824 TTTGGGGTTGGGCTGCTGTA 62.013 55.000 0.00 0.00 0.00 2.74
241 253 1.460504 GGTTCCTTCCGTGGGATTTC 58.539 55.000 0.00 0.00 32.41 2.17
242 254 1.004394 GGTTCCTTCCGTGGGATTTCT 59.996 52.381 0.00 0.00 32.41 2.52
247 259 0.690192 TTCCGTGGGATTTCTGCTCA 59.310 50.000 0.00 0.00 0.00 4.26
275 292 1.080995 GCAGTGAGCGCCTAGAGTTG 61.081 60.000 2.29 0.00 0.00 3.16
287 304 0.543410 TAGAGTTGCTCCCGTGGGAA 60.543 55.000 9.34 0.00 44.66 3.97
301 318 1.474077 GTGGGAATTTGCTCGCATTCT 59.526 47.619 5.53 0.00 40.03 2.40
303 320 1.474077 GGGAATTTGCTCGCATTCTGT 59.526 47.619 5.53 0.00 0.00 3.41
305 322 3.242870 GGGAATTTGCTCGCATTCTGTAG 60.243 47.826 5.53 0.00 0.00 2.74
307 324 1.086696 TTTGCTCGCATTCTGTAGGC 58.913 50.000 0.00 0.00 0.00 3.93
344 363 2.637025 CGGGTGCGGTTTTCTGTG 59.363 61.111 0.00 0.00 0.00 3.66
345 364 2.184167 CGGGTGCGGTTTTCTGTGT 61.184 57.895 0.00 0.00 0.00 3.72
346 365 1.720694 CGGGTGCGGTTTTCTGTGTT 61.721 55.000 0.00 0.00 0.00 3.32
347 366 0.458260 GGGTGCGGTTTTCTGTGTTT 59.542 50.000 0.00 0.00 0.00 2.83
348 367 1.677052 GGGTGCGGTTTTCTGTGTTTA 59.323 47.619 0.00 0.00 0.00 2.01
349 368 2.287368 GGGTGCGGTTTTCTGTGTTTAG 60.287 50.000 0.00 0.00 0.00 1.85
350 369 2.356695 GGTGCGGTTTTCTGTGTTTAGT 59.643 45.455 0.00 0.00 0.00 2.24
351 370 3.359654 GTGCGGTTTTCTGTGTTTAGTG 58.640 45.455 0.00 0.00 0.00 2.74
352 371 2.223386 TGCGGTTTTCTGTGTTTAGTGC 60.223 45.455 0.00 0.00 0.00 4.40
353 372 2.032924 GCGGTTTTCTGTGTTTAGTGCT 59.967 45.455 0.00 0.00 0.00 4.40
360 379 6.509418 TTTCTGTGTTTAGTGCTGAAGTTT 57.491 33.333 0.00 0.00 0.00 2.66
373 392 7.723324 AGTGCTGAAGTTTTACAGTAACTCTA 58.277 34.615 0.00 0.00 34.88 2.43
397 416 0.461339 TCGGCCGCAACTTTATCCTC 60.461 55.000 23.51 0.00 0.00 3.71
398 417 1.436983 CGGCCGCAACTTTATCCTCC 61.437 60.000 14.67 0.00 0.00 4.30
403 422 3.056821 GCCGCAACTTTATCCTCCTTTTT 60.057 43.478 0.00 0.00 0.00 1.94
444 463 3.244526 TGCTGATTCCTGTGCACTTTCTA 60.245 43.478 19.41 0.00 0.00 2.10
446 465 4.318332 CTGATTCCTGTGCACTTTCTACA 58.682 43.478 19.41 10.61 0.00 2.74
451 470 4.523083 TCCTGTGCACTTTCTACAGTTTT 58.477 39.130 19.41 0.00 40.04 2.43
490 509 2.685106 TGGGGTTATGCTGTTTTCCA 57.315 45.000 0.00 0.00 0.00 3.53
491 510 2.964209 TGGGGTTATGCTGTTTTCCAA 58.036 42.857 0.00 0.00 0.00 3.53
499 518 6.456988 GGTTATGCTGTTTTCCAATCTACTCG 60.457 42.308 0.00 0.00 0.00 4.18
500 519 4.002906 TGCTGTTTTCCAATCTACTCGT 57.997 40.909 0.00 0.00 0.00 4.18
512 531 5.221461 CCAATCTACTCGTAAGCTATTGGGT 60.221 44.000 10.12 1.33 36.56 4.51
545 564 5.505780 TGTGGAATTTTGGACCTAATCGAT 58.494 37.500 0.00 0.00 0.00 3.59
599 618 2.262915 CCTGCGAGGAGTGTCACC 59.737 66.667 0.00 0.00 37.67 4.02
603 622 1.006571 GCGAGGAGTGTCACCGAAA 60.007 57.895 0.00 0.00 0.00 3.46
620 639 2.031769 CGAAACTGTTCTTGCTGCATGA 60.032 45.455 13.50 13.50 0.00 3.07
639 658 8.389779 TGCATGACTTTTACTTCATCTGTTTA 57.610 30.769 0.00 0.00 29.64 2.01
670 689 1.463674 GGGAATGCGTGGAATTCTGT 58.536 50.000 5.23 0.00 34.95 3.41
803 823 5.938125 ACAAGTCAGTGTTGTTGTTACTTCT 59.062 36.000 0.00 0.00 34.37 2.85
1129 1152 2.190488 CTTTCGAGCCAGCTTCCCCT 62.190 60.000 0.00 0.00 0.00 4.79
1166 1189 3.514309 ACCTCAACGCACTAGTAGGAAAT 59.486 43.478 13.04 0.00 0.00 2.17
1167 1190 4.020485 ACCTCAACGCACTAGTAGGAAATT 60.020 41.667 13.04 0.00 0.00 1.82
1168 1191 4.935808 CCTCAACGCACTAGTAGGAAATTT 59.064 41.667 1.45 0.00 0.00 1.82
1205 1228 6.697455 TCGATCTCGAAAGATGAACTAAATGG 59.303 38.462 0.00 0.00 46.30 3.16
1208 1231 5.351465 TCTCGAAAGATGAACTAAATGGCAC 59.649 40.000 0.00 0.00 40.84 5.01
1288 1311 2.024414 ACCAACTCCTGCAAAAGACAC 58.976 47.619 2.18 0.00 0.00 3.67
1411 1434 3.554934 TCATGTTGTTTCCTGCTTGTCT 58.445 40.909 0.00 0.00 0.00 3.41
1413 1436 4.036734 TCATGTTGTTTCCTGCTTGTCTTC 59.963 41.667 0.00 0.00 0.00 2.87
1550 1802 5.099042 TCTGATGTCCTTTAAGGCCTAAC 57.901 43.478 5.16 0.00 34.61 2.34
1554 1806 1.280133 GTCCTTTAAGGCCTAACGGGT 59.720 52.381 5.16 0.00 34.61 5.28
1687 1939 8.076178 ACTAATGTTAGCACTCATTTTGTTGTC 58.924 33.333 0.00 0.00 36.06 3.18
1913 2167 3.826524 TGTTAACCTCAATTCACTGCCA 58.173 40.909 2.48 0.00 0.00 4.92
1918 2172 2.040813 ACCTCAATTCACTGCCACTGAT 59.959 45.455 0.00 0.00 0.00 2.90
1959 2213 7.124573 AGTAAAGTTTTGATGGAAGCCTTTT 57.875 32.000 0.00 0.00 0.00 2.27
1960 2214 6.986231 AGTAAAGTTTTGATGGAAGCCTTTTG 59.014 34.615 0.00 0.00 0.00 2.44
2014 2268 2.100252 GCAATGCCACATCTAAGCATGT 59.900 45.455 0.00 0.00 46.17 3.21
2055 2309 8.437360 AATTGCATTATCATCTACTTTCACGA 57.563 30.769 0.00 0.00 0.00 4.35
2123 2377 7.539712 TGCTTCAAGACTATGCTTTGTATAC 57.460 36.000 0.00 0.00 0.00 1.47
2434 2688 5.964477 TGGATAAATCTACTGTCCCAACTCT 59.036 40.000 0.00 0.00 0.00 3.24
2435 2689 6.127054 TGGATAAATCTACTGTCCCAACTCTG 60.127 42.308 0.00 0.00 0.00 3.35
2843 3100 8.987890 GTCATCAGAAATTCTTCTAAGGATAGC 58.012 37.037 0.00 0.00 40.05 2.97
2908 3165 7.619698 TGGGAGAAAGAAACTGATGAGTATAGA 59.380 37.037 0.00 0.00 0.00 1.98
3011 3268 6.357367 ACTTTGTAGGTTGTTTGATCACTCT 58.643 36.000 0.00 0.00 0.00 3.24
3076 3333 0.180406 CCTAAGTGCCCAACGCCTAT 59.820 55.000 0.00 0.00 36.24 2.57
3078 3335 2.158871 CCTAAGTGCCCAACGCCTATAA 60.159 50.000 0.00 0.00 36.24 0.98
3085 3355 4.450080 GTGCCCAACGCCTATAATAGTAAC 59.550 45.833 0.00 0.00 36.24 2.50
3509 3782 1.450211 CCCAGAAGTCGGTGGTGTT 59.550 57.895 0.00 0.00 31.17 3.32
3572 3845 4.900664 GCAAATGCAAGCCAAACATATTC 58.099 39.130 0.00 0.00 41.59 1.75
3576 3849 6.973229 AATGCAAGCCAAACATATTCTTTC 57.027 33.333 0.00 0.00 0.00 2.62
3621 3894 7.377696 TGTAACCTTTGAGTTCCCTAAGTTA 57.622 36.000 0.00 0.00 0.00 2.24
3624 3897 6.954352 ACCTTTGAGTTCCCTAAGTTATCT 57.046 37.500 0.00 0.00 0.00 1.98
3631 3904 4.473922 AGTTCCCTAAGTTATCTTCCACCC 59.526 45.833 0.00 0.00 35.36 4.61
3644 3917 1.661463 TCCACCCTTCTCTTGCATCT 58.339 50.000 0.00 0.00 0.00 2.90
3658 3931 6.324770 TCTCTTGCATCTGAGTAATCCATGTA 59.675 38.462 10.35 0.00 0.00 2.29
3659 3932 7.015974 TCTCTTGCATCTGAGTAATCCATGTAT 59.984 37.037 10.35 0.00 0.00 2.29
3668 3941 9.817809 TCTGAGTAATCCATGTATGTTAAGAAC 57.182 33.333 0.00 0.00 0.00 3.01
3681 3954 9.595823 TGTATGTTAAGAACTAAGAAGTATGCC 57.404 33.333 0.00 0.00 33.75 4.40
3688 3961 2.505819 ACTAAGAAGTATGCCTGGTGGG 59.494 50.000 0.00 0.00 32.84 4.61
3694 3967 1.283905 AGTATGCCTGGTGGGGTAAAC 59.716 52.381 0.00 0.00 35.12 2.01
3702 3975 3.069289 CTGGTGGGGTAAACGAAACTAC 58.931 50.000 0.00 0.00 0.00 2.73
3759 4032 5.705441 TCTGTTCGCTGGATTTCTGTTAATT 59.295 36.000 0.00 0.00 0.00 1.40
3923 4196 6.082338 GTGACTGAAAATACAATCACAGCAG 58.918 40.000 0.00 0.00 43.47 4.24
3972 4258 7.273320 AGAATATCCAGATCACAAATGCAAG 57.727 36.000 0.00 0.00 0.00 4.01
4023 4309 4.348486 TCAGGTTTCTCTGTAGAGCTCAT 58.652 43.478 17.77 3.63 41.80 2.90
4100 4386 8.788813 GTCTGTTTTTAATCACATATTCGCTTG 58.211 33.333 0.00 0.00 0.00 4.01
4102 4388 9.767684 CTGTTTTTAATCACATATTCGCTTGTA 57.232 29.630 0.00 0.00 0.00 2.41
4162 4452 0.461339 GTATTGGCTCGGCGGAAGAA 60.461 55.000 7.21 0.00 0.00 2.52
4178 4468 5.324697 CGGAAGAAATGCAAGCTAAAGTAC 58.675 41.667 0.00 0.00 0.00 2.73
4320 4610 1.679139 CTTGGTGCTCAAGTGGTTCA 58.321 50.000 10.76 0.00 45.81 3.18
4350 4640 2.090999 TGGCTGGGTTTTAGGGAACTTT 60.091 45.455 0.00 0.00 43.67 2.66
4673 4971 0.598065 GCAGTTTCGGGCATTCAGTT 59.402 50.000 0.00 0.00 0.00 3.16
4821 5119 0.181350 AGCCATCGGATCAAACCTCC 59.819 55.000 0.00 0.00 0.00 4.30
4857 5197 0.325296 AACCTACAGATCCGGCTCCA 60.325 55.000 0.62 0.00 0.00 3.86
4911 5251 1.869342 GCACAAGTCAATGCACCAACC 60.869 52.381 0.00 0.00 41.65 3.77
4948 5292 7.673641 TCCCTTCCTAACAACGGTAAATATA 57.326 36.000 0.00 0.00 0.00 0.86
4989 5334 4.170062 CCCGAGTCGCGAACGCTA 62.170 66.667 24.52 3.41 44.57 4.26
5069 5414 3.258971 AGAGCTCATTTGTCACTAGCC 57.741 47.619 17.77 0.00 33.63 3.93
5080 5425 3.689347 TGTCACTAGCCAAGCATTTCAT 58.311 40.909 0.00 0.00 0.00 2.57
5096 5441 4.597404 TTTCATTTGTAGTTGGCATGCA 57.403 36.364 21.36 2.54 0.00 3.96
5099 5444 4.746729 TCATTTGTAGTTGGCATGCATTC 58.253 39.130 21.36 8.52 0.00 2.67
5139 5484 1.039856 TGCCGCAGCAGTATCTGATA 58.960 50.000 0.00 0.00 46.52 2.15
5176 5563 7.824289 ACTTAGCTAAGTATTTCAGTTCATGCA 59.176 33.333 32.78 0.00 44.18 3.96
5213 5605 3.878699 TGTCCATTACATGTATGCAGCAG 59.121 43.478 6.36 0.00 31.43 4.24
5339 5731 3.075005 GACCGAGCCCTGGTAGCA 61.075 66.667 0.00 0.00 40.63 3.49
5343 5735 1.448540 CGAGCCCTGGTAGCACAAG 60.449 63.158 0.00 0.00 0.00 3.16
5363 5755 3.486263 CGAAGCGGGTTTAGGCAG 58.514 61.111 0.00 0.00 0.00 4.85
5379 5772 1.307097 GCAGAGGCCTGATGATCAAC 58.693 55.000 12.00 0.00 43.02 3.18
5381 5774 1.211212 CAGAGGCCTGATGATCAACCA 59.789 52.381 12.00 0.00 43.02 3.67
5386 5779 2.618816 GGCCTGATGATCAACCAACTCA 60.619 50.000 0.00 0.00 0.00 3.41
5387 5780 2.681848 GCCTGATGATCAACCAACTCAG 59.318 50.000 12.77 12.77 0.00 3.35
5389 5782 4.330250 CCTGATGATCAACCAACTCAGTT 58.670 43.478 16.63 0.00 0.00 3.16
5418 5811 4.019411 TCATCCAGAAACTTAGTCATGGCA 60.019 41.667 0.00 0.00 0.00 4.92
5419 5812 4.365514 TCCAGAAACTTAGTCATGGCAA 57.634 40.909 0.00 0.00 0.00 4.52
5420 5813 4.922206 TCCAGAAACTTAGTCATGGCAAT 58.078 39.130 0.00 0.00 0.00 3.56
5421 5814 4.701651 TCCAGAAACTTAGTCATGGCAATG 59.298 41.667 0.00 0.00 34.88 2.82
5425 5818 5.948162 AGAAACTTAGTCATGGCAATGATGT 59.052 36.000 7.14 0.48 44.54 3.06
5427 5820 3.873361 ACTTAGTCATGGCAATGATGTCG 59.127 43.478 7.14 0.00 44.54 4.35
5428 5821 1.019673 AGTCATGGCAATGATGTCGC 58.980 50.000 7.14 0.00 44.54 5.19
5430 5823 1.018910 TCATGGCAATGATGTCGCTG 58.981 50.000 0.00 0.00 37.91 5.18
5507 5923 3.151710 CTCCATGCCCCGTCGGTA 61.152 66.667 11.06 0.00 0.00 4.02
5508 5924 3.151710 TCCATGCCCCGTCGGTAG 61.152 66.667 11.06 2.08 0.00 3.18
5509 5925 4.235762 CCATGCCCCGTCGGTAGG 62.236 72.222 11.06 6.36 0.00 3.18
5514 5930 4.807039 CCCCGTCGGTAGGCGTTG 62.807 72.222 11.06 0.00 45.26 4.10
5516 5932 4.430765 CCGTCGGTAGGCGTTGCT 62.431 66.667 2.08 0.00 45.26 3.91
5517 5933 3.179265 CGTCGGTAGGCGTTGCTG 61.179 66.667 0.00 0.00 41.17 4.41
5519 5935 1.213537 GTCGGTAGGCGTTGCTGTA 59.786 57.895 0.00 0.00 0.00 2.74
5520 5936 0.388907 GTCGGTAGGCGTTGCTGTAA 60.389 55.000 0.00 0.00 0.00 2.41
5541 5957 2.769663 ACCATTACCTCATGCTTCCGTA 59.230 45.455 0.00 0.00 0.00 4.02
5542 5958 3.181465 ACCATTACCTCATGCTTCCGTAG 60.181 47.826 0.00 0.00 0.00 3.51
5569 5990 6.525121 TCTGTGTGTATGTTTTCTTCTTCG 57.475 37.500 0.00 0.00 0.00 3.79
5571 5992 6.200286 TCTGTGTGTATGTTTTCTTCTTCGAC 59.800 38.462 0.00 0.00 0.00 4.20
5577 5998 3.463944 TGTTTTCTTCTTCGACCCACTC 58.536 45.455 0.00 0.00 0.00 3.51
5718 6145 3.070576 GGTTGGGACCAGCCATGC 61.071 66.667 18.05 0.00 45.06 4.06
5723 6152 1.443852 TGGGACCAGCCATGCATATA 58.556 50.000 0.00 0.00 38.95 0.86
5734 6163 3.633525 GCCATGCATATACCCCATGTATG 59.366 47.826 0.00 6.46 42.63 2.39
5753 6182 3.393089 TGTCTCTCACTGCTTTCTTCC 57.607 47.619 0.00 0.00 0.00 3.46
5756 6185 2.075338 CTCTCACTGCTTTCTTCCTGC 58.925 52.381 0.00 0.00 0.00 4.85
5757 6186 1.696336 TCTCACTGCTTTCTTCCTGCT 59.304 47.619 0.00 0.00 0.00 4.24
5758 6187 2.105477 TCTCACTGCTTTCTTCCTGCTT 59.895 45.455 0.00 0.00 0.00 3.91
5759 6188 2.483491 CTCACTGCTTTCTTCCTGCTTC 59.517 50.000 0.00 0.00 0.00 3.86
5760 6189 1.538950 CACTGCTTTCTTCCTGCTTCC 59.461 52.381 0.00 0.00 0.00 3.46
5794 6223 7.936301 AGATTCTTCTGGAGGAATTGTATAAGC 59.064 37.037 8.86 0.00 37.27 3.09
5795 6224 6.560003 TCTTCTGGAGGAATTGTATAAGCA 57.440 37.500 0.00 0.00 33.01 3.91
5804 6234 5.472137 AGGAATTGTATAAGCACAACGTGTT 59.528 36.000 0.00 0.00 41.02 3.32
5818 6248 0.806868 CGTGTTCCATCTTGCATGCT 59.193 50.000 20.33 0.00 0.00 3.79
5857 6287 2.676748 TGATGAAAGTGGTGGCCTTTT 58.323 42.857 3.32 0.00 32.47 2.27
5952 6386 3.062639 CAAAGCAGCCCCCTTTGG 58.937 61.111 11.45 0.00 43.26 3.28
6004 6452 1.106285 GCCTGCCTTTGACTAATGGG 58.894 55.000 0.00 0.00 33.02 4.00
6008 6456 3.624777 CTGCCTTTGACTAATGGGATGT 58.375 45.455 0.00 0.00 32.36 3.06
6010 6458 3.266772 TGCCTTTGACTAATGGGATGTCT 59.733 43.478 0.00 0.00 33.02 3.41
6012 6460 4.626287 GCCTTTGACTAATGGGATGTCTGA 60.626 45.833 0.00 0.00 33.02 3.27
6021 6469 0.610174 GGGATGTCTGAGCTGTGTGA 59.390 55.000 0.00 0.00 0.00 3.58
6025 6473 4.444022 GGGATGTCTGAGCTGTGTGATAAT 60.444 45.833 0.00 0.00 0.00 1.28
6026 6474 4.749099 GGATGTCTGAGCTGTGTGATAATC 59.251 45.833 0.00 0.00 0.00 1.75
6027 6475 5.453057 GGATGTCTGAGCTGTGTGATAATCT 60.453 44.000 0.00 0.00 0.00 2.40
6028 6476 4.752146 TGTCTGAGCTGTGTGATAATCTG 58.248 43.478 0.00 0.00 0.00 2.90
6029 6477 4.463891 TGTCTGAGCTGTGTGATAATCTGA 59.536 41.667 0.00 0.00 0.00 3.27
6030 6478 5.128335 TGTCTGAGCTGTGTGATAATCTGAT 59.872 40.000 0.00 0.00 0.00 2.90
6031 6479 5.462729 GTCTGAGCTGTGTGATAATCTGATG 59.537 44.000 0.00 0.00 0.00 3.07
6032 6480 5.128335 TCTGAGCTGTGTGATAATCTGATGT 59.872 40.000 0.00 0.00 0.00 3.06
6033 6481 5.114081 TGAGCTGTGTGATAATCTGATGTG 58.886 41.667 0.00 0.00 0.00 3.21
6034 6482 3.875727 AGCTGTGTGATAATCTGATGTGC 59.124 43.478 0.00 0.00 0.00 4.57
6035 6483 3.875727 GCTGTGTGATAATCTGATGTGCT 59.124 43.478 0.00 0.00 0.00 4.40
6036 6484 4.260661 GCTGTGTGATAATCTGATGTGCTG 60.261 45.833 0.00 0.00 0.00 4.41
6037 6485 4.835678 TGTGTGATAATCTGATGTGCTGT 58.164 39.130 0.00 0.00 0.00 4.40
6038 6486 5.247862 TGTGTGATAATCTGATGTGCTGTT 58.752 37.500 0.00 0.00 0.00 3.16
6041 6489 5.032863 GTGATAATCTGATGTGCTGTTTGC 58.967 41.667 0.00 0.00 43.25 3.68
6043 6491 3.844577 AATCTGATGTGCTGTTTGCTC 57.155 42.857 0.00 0.00 43.37 4.26
6075 6563 1.144708 TGAAAGCATGTGTTCAGGGGA 59.855 47.619 8.57 0.00 30.41 4.81
6088 6578 4.665009 TGTTCAGGGGATTAGGATAATGCT 59.335 41.667 1.84 0.00 0.00 3.79
6091 6581 5.411493 TCAGGGGATTAGGATAATGCTGTA 58.589 41.667 1.84 0.00 0.00 2.74
6092 6582 6.032039 TCAGGGGATTAGGATAATGCTGTAT 58.968 40.000 1.84 0.00 0.00 2.29
6097 6587 5.355350 GGATTAGGATAATGCTGTATGTGGC 59.645 44.000 0.00 0.00 0.00 5.01
6102 6592 0.253044 AATGCTGTATGTGGCGGTCT 59.747 50.000 0.00 0.00 0.00 3.85
6108 6598 0.178068 GTATGTGGCGGTCTGGTGAT 59.822 55.000 0.00 0.00 0.00 3.06
6118 6608 3.309388 CGGTCTGGTGATGACGATTATC 58.691 50.000 0.00 0.00 35.45 1.75
6132 6622 7.023197 TGACGATTATCTTGTTGAGATACGA 57.977 36.000 10.88 0.00 44.94 3.43
6150 6640 2.789339 ACGACGCGATTAGAATGTGATG 59.211 45.455 15.93 0.00 0.00 3.07
6151 6641 2.789339 CGACGCGATTAGAATGTGATGT 59.211 45.455 15.93 0.00 0.00 3.06
6152 6642 3.361051 CGACGCGATTAGAATGTGATGTG 60.361 47.826 15.93 0.00 0.00 3.21
6153 6643 3.521560 ACGCGATTAGAATGTGATGTGT 58.478 40.909 15.93 0.00 0.00 3.72
6154 6644 3.551890 ACGCGATTAGAATGTGATGTGTC 59.448 43.478 15.93 0.00 0.00 3.67
6155 6645 3.551485 CGCGATTAGAATGTGATGTGTCA 59.449 43.478 0.00 0.00 0.00 3.58
6156 6646 4.317628 CGCGATTAGAATGTGATGTGTCAG 60.318 45.833 0.00 0.00 34.36 3.51
6157 6647 4.805719 GCGATTAGAATGTGATGTGTCAGA 59.194 41.667 0.00 0.00 34.36 3.27
6158 6648 5.291858 GCGATTAGAATGTGATGTGTCAGAA 59.708 40.000 0.00 0.00 34.36 3.02
6159 6649 6.018425 GCGATTAGAATGTGATGTGTCAGAAT 60.018 38.462 0.00 0.00 34.36 2.40
6160 6650 7.466455 GCGATTAGAATGTGATGTGTCAGAATT 60.466 37.037 0.00 0.00 34.36 2.17
6161 6651 7.849515 CGATTAGAATGTGATGTGTCAGAATTG 59.150 37.037 0.00 0.00 34.36 2.32
6162 6652 8.797350 ATTAGAATGTGATGTGTCAGAATTGA 57.203 30.769 0.00 0.00 34.36 2.57
6163 6653 8.797350 TTAGAATGTGATGTGTCAGAATTGAT 57.203 30.769 0.00 0.00 35.39 2.57
6164 6654 7.698506 AGAATGTGATGTGTCAGAATTGATT 57.301 32.000 0.00 0.00 35.39 2.57
6165 6655 7.535997 AGAATGTGATGTGTCAGAATTGATTG 58.464 34.615 0.00 0.00 35.39 2.67
6166 6656 7.392393 AGAATGTGATGTGTCAGAATTGATTGA 59.608 33.333 0.00 0.00 35.39 2.57
6167 6657 7.640597 ATGTGATGTGTCAGAATTGATTGAT 57.359 32.000 0.00 0.00 35.39 2.57
6168 6658 7.457024 TGTGATGTGTCAGAATTGATTGATT 57.543 32.000 0.00 0.00 35.39 2.57
6169 6659 7.888424 TGTGATGTGTCAGAATTGATTGATTT 58.112 30.769 0.00 0.00 35.39 2.17
6170 6660 7.810759 TGTGATGTGTCAGAATTGATTGATTTG 59.189 33.333 0.00 0.00 35.39 2.32
6171 6661 7.811236 GTGATGTGTCAGAATTGATTGATTTGT 59.189 33.333 0.00 0.00 35.39 2.83
6172 6662 8.361889 TGATGTGTCAGAATTGATTGATTTGTT 58.638 29.630 0.00 0.00 35.39 2.83
6173 6663 9.199982 GATGTGTCAGAATTGATTGATTTGTTT 57.800 29.630 0.00 0.00 35.39 2.83
6174 6664 8.578308 TGTGTCAGAATTGATTGATTTGTTTC 57.422 30.769 0.00 0.00 35.39 2.78
6175 6665 8.415553 TGTGTCAGAATTGATTGATTTGTTTCT 58.584 29.630 0.00 0.00 35.39 2.52
6176 6666 9.252962 GTGTCAGAATTGATTGATTTGTTTCTT 57.747 29.630 0.00 0.00 35.39 2.52
6177 6667 9.251792 TGTCAGAATTGATTGATTTGTTTCTTG 57.748 29.630 0.00 0.00 35.39 3.02
6178 6668 9.252962 GTCAGAATTGATTGATTTGTTTCTTGT 57.747 29.630 0.00 0.00 35.39 3.16
6179 6669 9.820725 TCAGAATTGATTGATTTGTTTCTTGTT 57.179 25.926 0.00 0.00 0.00 2.83
6180 6670 9.858247 CAGAATTGATTGATTTGTTTCTTGTTG 57.142 29.630 0.00 0.00 0.00 3.33
6181 6671 9.048446 AGAATTGATTGATTTGTTTCTTGTTGG 57.952 29.630 0.00 0.00 0.00 3.77
6182 6672 8.735692 AATTGATTGATTTGTTTCTTGTTGGT 57.264 26.923 0.00 0.00 0.00 3.67
6183 6673 8.735692 ATTGATTGATTTGTTTCTTGTTGGTT 57.264 26.923 0.00 0.00 0.00 3.67
6184 6674 7.769272 TGATTGATTTGTTTCTTGTTGGTTC 57.231 32.000 0.00 0.00 0.00 3.62
6185 6675 6.475076 TGATTGATTTGTTTCTTGTTGGTTCG 59.525 34.615 0.00 0.00 0.00 3.95
6186 6676 5.317733 TGATTTGTTTCTTGTTGGTTCGT 57.682 34.783 0.00 0.00 0.00 3.85
6187 6677 5.715070 TGATTTGTTTCTTGTTGGTTCGTT 58.285 33.333 0.00 0.00 0.00 3.85
6188 6678 5.574830 TGATTTGTTTCTTGTTGGTTCGTTG 59.425 36.000 0.00 0.00 0.00 4.10
6189 6679 3.495670 TGTTTCTTGTTGGTTCGTTGG 57.504 42.857 0.00 0.00 0.00 3.77
6190 6680 3.082548 TGTTTCTTGTTGGTTCGTTGGA 58.917 40.909 0.00 0.00 0.00 3.53
6191 6681 3.506455 TGTTTCTTGTTGGTTCGTTGGAA 59.494 39.130 0.00 0.00 0.00 3.53
6192 6682 4.102649 GTTTCTTGTTGGTTCGTTGGAAG 58.897 43.478 0.00 0.00 31.49 3.46
6193 6683 2.294074 TCTTGTTGGTTCGTTGGAAGG 58.706 47.619 0.00 0.00 31.49 3.46
6194 6684 2.021457 CTTGTTGGTTCGTTGGAAGGT 58.979 47.619 0.00 0.00 31.49 3.50
6195 6685 1.670791 TGTTGGTTCGTTGGAAGGTC 58.329 50.000 0.00 0.00 31.49 3.85
6196 6686 1.065345 TGTTGGTTCGTTGGAAGGTCA 60.065 47.619 0.00 0.00 31.49 4.02
6197 6687 1.602377 GTTGGTTCGTTGGAAGGTCAG 59.398 52.381 0.00 0.00 31.49 3.51
6198 6688 0.834612 TGGTTCGTTGGAAGGTCAGT 59.165 50.000 0.00 0.00 31.49 3.41
6199 6689 1.226746 GGTTCGTTGGAAGGTCAGTG 58.773 55.000 0.00 0.00 31.49 3.66
6200 6690 1.474498 GGTTCGTTGGAAGGTCAGTGT 60.474 52.381 0.00 0.00 31.49 3.55
6201 6691 2.224113 GGTTCGTTGGAAGGTCAGTGTA 60.224 50.000 0.00 0.00 31.49 2.90
6202 6692 2.798847 GTTCGTTGGAAGGTCAGTGTAC 59.201 50.000 0.00 0.00 31.49 2.90
6203 6693 2.033372 TCGTTGGAAGGTCAGTGTACA 58.967 47.619 0.00 0.00 0.00 2.90
6204 6694 2.431419 TCGTTGGAAGGTCAGTGTACAA 59.569 45.455 0.00 0.00 0.00 2.41
6205 6695 3.118702 TCGTTGGAAGGTCAGTGTACAAA 60.119 43.478 0.00 0.00 0.00 2.83
6206 6696 3.247648 CGTTGGAAGGTCAGTGTACAAAG 59.752 47.826 0.00 0.00 0.00 2.77
6207 6697 4.448210 GTTGGAAGGTCAGTGTACAAAGA 58.552 43.478 0.00 0.00 0.00 2.52
6208 6698 4.974645 TGGAAGGTCAGTGTACAAAGAT 57.025 40.909 0.00 0.00 0.00 2.40
6209 6699 4.641396 TGGAAGGTCAGTGTACAAAGATG 58.359 43.478 0.00 0.00 0.00 2.90
6210 6700 4.003648 GGAAGGTCAGTGTACAAAGATGG 58.996 47.826 0.00 0.00 0.00 3.51
6211 6701 3.059352 AGGTCAGTGTACAAAGATGGC 57.941 47.619 0.00 0.00 0.00 4.40
6212 6702 2.371841 AGGTCAGTGTACAAAGATGGCA 59.628 45.455 0.00 0.00 0.00 4.92
6213 6703 3.146066 GGTCAGTGTACAAAGATGGCAA 58.854 45.455 0.00 0.00 0.00 4.52
6214 6704 3.758554 GGTCAGTGTACAAAGATGGCAAT 59.241 43.478 0.00 0.00 0.00 3.56
6215 6705 4.142600 GGTCAGTGTACAAAGATGGCAATC 60.143 45.833 0.00 0.00 0.00 2.67
6216 6706 3.684305 TCAGTGTACAAAGATGGCAATCG 59.316 43.478 0.00 0.00 37.92 3.34
6217 6707 3.009723 AGTGTACAAAGATGGCAATCGG 58.990 45.455 0.00 0.00 37.92 4.18
6218 6708 3.006940 GTGTACAAAGATGGCAATCGGA 58.993 45.455 0.00 0.00 37.92 4.55
6219 6709 3.438781 GTGTACAAAGATGGCAATCGGAA 59.561 43.478 0.00 0.00 37.92 4.30
6220 6710 4.075682 TGTACAAAGATGGCAATCGGAAA 58.924 39.130 0.00 0.00 37.92 3.13
6221 6711 4.704540 TGTACAAAGATGGCAATCGGAAAT 59.295 37.500 0.00 0.00 37.92 2.17
6222 6712 4.806640 ACAAAGATGGCAATCGGAAATT 57.193 36.364 0.00 0.00 37.92 1.82
6223 6713 4.497300 ACAAAGATGGCAATCGGAAATTG 58.503 39.130 0.00 1.08 37.92 2.32
6224 6714 4.220382 ACAAAGATGGCAATCGGAAATTGA 59.780 37.500 11.14 0.00 37.92 2.57
6225 6715 5.105228 ACAAAGATGGCAATCGGAAATTGAT 60.105 36.000 11.14 0.00 37.92 2.57
6226 6716 4.843220 AGATGGCAATCGGAAATTGATC 57.157 40.909 0.00 0.00 37.92 2.92
6227 6717 3.571401 AGATGGCAATCGGAAATTGATCC 59.429 43.478 0.00 0.00 37.92 3.36
6228 6718 2.732763 TGGCAATCGGAAATTGATCCA 58.267 42.857 2.07 0.00 39.61 3.41
6229 6719 3.095332 TGGCAATCGGAAATTGATCCAA 58.905 40.909 2.07 0.00 39.61 3.53
6230 6720 3.119173 TGGCAATCGGAAATTGATCCAAC 60.119 43.478 2.07 0.00 39.61 3.77
6231 6721 3.108144 GCAATCGGAAATTGATCCAACG 58.892 45.455 2.07 0.00 39.61 4.10
6232 6722 3.181501 GCAATCGGAAATTGATCCAACGA 60.182 43.478 2.07 0.00 39.61 3.85
6233 6723 4.342772 CAATCGGAAATTGATCCAACGAC 58.657 43.478 0.00 0.00 39.61 4.34
6234 6724 2.352388 TCGGAAATTGATCCAACGACC 58.648 47.619 0.00 0.00 39.61 4.79
6235 6725 2.027561 TCGGAAATTGATCCAACGACCT 60.028 45.455 0.00 0.00 39.61 3.85
6236 6726 2.095853 CGGAAATTGATCCAACGACCTG 59.904 50.000 0.00 0.00 39.61 4.00
6237 6727 3.081804 GGAAATTGATCCAACGACCTGT 58.918 45.455 0.00 0.00 39.42 4.00
6238 6728 3.506067 GGAAATTGATCCAACGACCTGTT 59.494 43.478 0.00 0.00 43.09 3.16
6249 6739 2.980568 ACGACCTGTTGTCTTTGTTCA 58.019 42.857 0.00 0.00 42.13 3.18
6250 6740 2.936498 ACGACCTGTTGTCTTTGTTCAG 59.064 45.455 0.00 0.00 42.13 3.02
6251 6741 2.286418 CGACCTGTTGTCTTTGTTCAGC 60.286 50.000 0.00 0.00 42.13 4.26
6252 6742 2.682856 GACCTGTTGTCTTTGTTCAGCA 59.317 45.455 0.00 0.00 41.03 4.41
6253 6743 2.684881 ACCTGTTGTCTTTGTTCAGCAG 59.315 45.455 0.00 0.00 40.68 4.24
6254 6744 2.945008 CCTGTTGTCTTTGTTCAGCAGA 59.055 45.455 9.77 0.00 42.54 4.26
6255 6745 3.242870 CCTGTTGTCTTTGTTCAGCAGAC 60.243 47.826 9.77 7.06 42.54 3.51
6256 6746 3.342719 TGTTGTCTTTGTTCAGCAGACA 58.657 40.909 10.74 10.74 37.68 3.41
6257 6747 3.374988 TGTTGTCTTTGTTCAGCAGACAG 59.625 43.478 13.03 0.00 40.06 3.51
6258 6748 2.564771 TGTCTTTGTTCAGCAGACAGG 58.435 47.619 10.74 0.00 35.00 4.00
6259 6749 2.092968 TGTCTTTGTTCAGCAGACAGGT 60.093 45.455 10.74 0.00 35.00 4.00
6260 6750 2.289002 GTCTTTGTTCAGCAGACAGGTG 59.711 50.000 8.43 0.00 46.98 4.00
6261 6751 1.605710 CTTTGTTCAGCAGACAGGTGG 59.394 52.381 0.00 0.00 45.66 4.61
6262 6752 0.179020 TTGTTCAGCAGACAGGTGGG 60.179 55.000 0.00 0.00 45.66 4.61
6263 6753 1.968540 GTTCAGCAGACAGGTGGGC 60.969 63.158 0.00 0.00 45.66 5.36
6264 6754 3.196207 TTCAGCAGACAGGTGGGCC 62.196 63.158 0.00 0.00 45.66 5.80
6265 6755 4.729918 CAGCAGACAGGTGGGCCC 62.730 72.222 17.59 17.59 41.98 5.80
6269 6759 4.741239 AGACAGGTGGGCCCGGAT 62.741 66.667 19.37 1.01 38.74 4.18
6270 6760 4.176752 GACAGGTGGGCCCGGATC 62.177 72.222 19.37 6.43 38.74 3.36
6272 6762 3.492353 CAGGTGGGCCCGGATCAT 61.492 66.667 19.37 2.02 38.74 2.45
6273 6763 2.146724 CAGGTGGGCCCGGATCATA 61.147 63.158 19.37 0.00 38.74 2.15
6274 6764 2.147387 AGGTGGGCCCGGATCATAC 61.147 63.158 19.37 7.55 38.74 2.39
6275 6765 2.147387 GGTGGGCCCGGATCATACT 61.147 63.158 19.37 0.00 0.00 2.12
6276 6766 1.071471 GTGGGCCCGGATCATACTG 59.929 63.158 19.37 0.00 0.00 2.74
6277 6767 1.074850 TGGGCCCGGATCATACTGA 60.075 57.895 19.37 0.00 0.00 3.41
6278 6768 0.473694 TGGGCCCGGATCATACTGAT 60.474 55.000 19.37 0.00 40.34 2.90
6279 6769 0.036010 GGGCCCGGATCATACTGATG 60.036 60.000 5.69 0.00 37.20 3.07
6280 6770 0.036010 GGCCCGGATCATACTGATGG 60.036 60.000 0.73 0.00 37.20 3.51
6281 6771 0.674895 GCCCGGATCATACTGATGGC 60.675 60.000 0.73 0.00 37.20 4.40
6282 6772 0.390340 CCCGGATCATACTGATGGCG 60.390 60.000 0.73 0.00 37.20 5.69
6283 6773 1.016130 CCGGATCATACTGATGGCGC 61.016 60.000 0.00 0.00 37.20 6.53
6284 6774 0.319813 CGGATCATACTGATGGCGCA 60.320 55.000 10.83 0.00 37.20 6.09
6285 6775 1.673923 CGGATCATACTGATGGCGCAT 60.674 52.381 10.83 0.00 37.20 4.73
6286 6776 1.736126 GGATCATACTGATGGCGCATG 59.264 52.381 10.83 1.97 37.20 4.06
6287 6777 1.736126 GATCATACTGATGGCGCATGG 59.264 52.381 10.83 0.00 37.20 3.66
6288 6778 0.758123 TCATACTGATGGCGCATGGA 59.242 50.000 10.83 0.00 33.49 3.41
6289 6779 1.154197 CATACTGATGGCGCATGGAG 58.846 55.000 10.83 1.49 0.00 3.86
6290 6780 0.604780 ATACTGATGGCGCATGGAGC 60.605 55.000 10.83 0.00 40.87 4.70
6314 6804 3.277715 CCAGATTTGGCTCTCTTTCTCC 58.722 50.000 0.00 0.00 37.73 3.71
6315 6805 3.277715 CAGATTTGGCTCTCTTTCTCCC 58.722 50.000 0.00 0.00 0.00 4.30
6316 6806 3.054508 CAGATTTGGCTCTCTTTCTCCCT 60.055 47.826 0.00 0.00 0.00 4.20
6317 6807 3.199727 AGATTTGGCTCTCTTTCTCCCTC 59.800 47.826 0.00 0.00 0.00 4.30
6318 6808 2.334006 TTGGCTCTCTTTCTCCCTCT 57.666 50.000 0.00 0.00 0.00 3.69
6319 6809 1.859302 TGGCTCTCTTTCTCCCTCTC 58.141 55.000 0.00 0.00 0.00 3.20
6320 6810 1.077828 TGGCTCTCTTTCTCCCTCTCA 59.922 52.381 0.00 0.00 0.00 3.27
6321 6811 1.480545 GGCTCTCTTTCTCCCTCTCAC 59.519 57.143 0.00 0.00 0.00 3.51
6322 6812 1.480545 GCTCTCTTTCTCCCTCTCACC 59.519 57.143 0.00 0.00 0.00 4.02
6323 6813 2.813907 CTCTCTTTCTCCCTCTCACCA 58.186 52.381 0.00 0.00 0.00 4.17
6324 6814 3.373830 CTCTCTTTCTCCCTCTCACCAT 58.626 50.000 0.00 0.00 0.00 3.55
6325 6815 3.774216 CTCTCTTTCTCCCTCTCACCATT 59.226 47.826 0.00 0.00 0.00 3.16
6326 6816 3.517100 TCTCTTTCTCCCTCTCACCATTG 59.483 47.826 0.00 0.00 0.00 2.82
6327 6817 2.026822 TCTTTCTCCCTCTCACCATTGC 60.027 50.000 0.00 0.00 0.00 3.56
6328 6818 1.361204 TTCTCCCTCTCACCATTGCA 58.639 50.000 0.00 0.00 0.00 4.08
6329 6819 1.588239 TCTCCCTCTCACCATTGCAT 58.412 50.000 0.00 0.00 0.00 3.96
6330 6820 2.763039 TCTCCCTCTCACCATTGCATA 58.237 47.619 0.00 0.00 0.00 3.14
6331 6821 2.435805 TCTCCCTCTCACCATTGCATAC 59.564 50.000 0.00 0.00 0.00 2.39
6332 6822 1.490490 TCCCTCTCACCATTGCATACC 59.510 52.381 0.00 0.00 0.00 2.73
6333 6823 1.492176 CCCTCTCACCATTGCATACCT 59.508 52.381 0.00 0.00 0.00 3.08
6334 6824 2.092212 CCCTCTCACCATTGCATACCTT 60.092 50.000 0.00 0.00 0.00 3.50
6335 6825 2.947652 CCTCTCACCATTGCATACCTTG 59.052 50.000 0.00 0.00 0.00 3.61
6336 6826 3.614092 CTCTCACCATTGCATACCTTGT 58.386 45.455 0.00 0.00 0.00 3.16
6337 6827 3.346315 TCTCACCATTGCATACCTTGTG 58.654 45.455 0.00 0.00 0.00 3.33
6338 6828 3.084039 CTCACCATTGCATACCTTGTGT 58.916 45.455 0.00 0.00 0.00 3.72
6339 6829 2.819019 TCACCATTGCATACCTTGTGTG 59.181 45.455 0.00 0.00 0.00 3.82
6344 6834 2.244000 GCATACCTTGTGTGCGTGT 58.756 52.632 0.23 0.00 40.41 4.49
6345 6835 0.110238 GCATACCTTGTGTGCGTGTG 60.110 55.000 0.23 0.00 40.41 3.82
6346 6836 0.110238 CATACCTTGTGTGCGTGTGC 60.110 55.000 0.00 0.00 43.20 4.57
6347 6837 0.250295 ATACCTTGTGTGCGTGTGCT 60.250 50.000 0.00 0.00 43.34 4.40
6348 6838 0.462937 TACCTTGTGTGCGTGTGCTT 60.463 50.000 0.00 0.00 43.34 3.91
6349 6839 1.312371 ACCTTGTGTGCGTGTGCTTT 61.312 50.000 0.00 0.00 43.34 3.51
6350 6840 0.866906 CCTTGTGTGCGTGTGCTTTG 60.867 55.000 0.00 0.00 43.34 2.77
6351 6841 1.473857 CTTGTGTGCGTGTGCTTTGC 61.474 55.000 0.00 0.00 43.34 3.68
6352 6842 1.932011 TTGTGTGCGTGTGCTTTGCT 61.932 50.000 0.00 0.00 43.34 3.91
6353 6843 1.092345 TGTGTGCGTGTGCTTTGCTA 61.092 50.000 0.00 0.00 43.34 3.49
6354 6844 0.657368 GTGTGCGTGTGCTTTGCTAC 60.657 55.000 0.00 0.00 43.34 3.58
6355 6845 0.813610 TGTGCGTGTGCTTTGCTACT 60.814 50.000 0.00 0.00 43.34 2.57
6356 6846 1.144969 GTGCGTGTGCTTTGCTACTA 58.855 50.000 0.00 0.00 43.34 1.82
6357 6847 1.136336 GTGCGTGTGCTTTGCTACTAC 60.136 52.381 0.00 0.00 43.34 2.73
6358 6848 1.144969 GCGTGTGCTTTGCTACTACA 58.855 50.000 0.00 0.00 38.39 2.74
6359 6849 1.732259 GCGTGTGCTTTGCTACTACAT 59.268 47.619 0.00 0.00 38.39 2.29
6360 6850 2.159627 GCGTGTGCTTTGCTACTACATT 59.840 45.455 0.00 0.00 38.39 2.71
6361 6851 3.364964 GCGTGTGCTTTGCTACTACATTT 60.365 43.478 0.00 0.00 38.39 2.32
6362 6852 4.151070 CGTGTGCTTTGCTACTACATTTG 58.849 43.478 0.00 0.00 0.00 2.32
6363 6853 4.319477 CGTGTGCTTTGCTACTACATTTGT 60.319 41.667 0.00 0.00 0.00 2.83
6364 6854 5.107259 CGTGTGCTTTGCTACTACATTTGTA 60.107 40.000 0.00 0.00 0.00 2.41
6365 6855 6.565060 CGTGTGCTTTGCTACTACATTTGTAA 60.565 38.462 0.00 0.00 0.00 2.41
6366 6856 7.305474 GTGTGCTTTGCTACTACATTTGTAAT 58.695 34.615 0.00 0.00 0.00 1.89
6367 6857 7.271223 GTGTGCTTTGCTACTACATTTGTAATG 59.729 37.037 0.00 0.00 0.00 1.90
6368 6858 7.040755 TGTGCTTTGCTACTACATTTGTAATGT 60.041 33.333 9.69 9.69 36.13 2.71
6369 6859 7.807907 GTGCTTTGCTACTACATTTGTAATGTT 59.192 33.333 10.01 0.00 33.76 2.71
6370 6860 7.807433 TGCTTTGCTACTACATTTGTAATGTTG 59.193 33.333 10.01 10.47 33.76 3.33
6371 6861 8.020819 GCTTTGCTACTACATTTGTAATGTTGA 58.979 33.333 16.80 0.00 33.76 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 4.809193 AGACCTAGAGACAGCATCCATTA 58.191 43.478 0.00 0.00 0.00 1.90
7 8 3.640967 GAGACCTAGAGACAGCATCCATT 59.359 47.826 0.00 0.00 0.00 3.16
12 13 2.031120 GCAGAGACCTAGAGACAGCAT 58.969 52.381 0.00 0.00 0.00 3.79
13 14 1.005332 AGCAGAGACCTAGAGACAGCA 59.995 52.381 0.00 0.00 0.00 4.41
16 17 1.005332 AGCAGCAGAGACCTAGAGACA 59.995 52.381 0.00 0.00 0.00 3.41
27 28 4.099170 GCACGCCAAGCAGCAGAG 62.099 66.667 0.00 0.00 31.21 3.35
34 36 0.740737 AAATCCTATGCACGCCAAGC 59.259 50.000 0.00 0.00 0.00 4.01
44 46 6.096846 CCCAAAAGGTCCTACAAAATCCTATG 59.903 42.308 0.00 0.00 0.00 2.23
45 47 6.194967 CCCAAAAGGTCCTACAAAATCCTAT 58.805 40.000 0.00 0.00 0.00 2.57
46 48 5.517655 CCCCAAAAGGTCCTACAAAATCCTA 60.518 44.000 0.00 0.00 0.00 2.94
54 56 0.696501 GCTCCCCAAAAGGTCCTACA 59.303 55.000 0.00 0.00 0.00 2.74
71 74 1.270550 CCAGCAAAAATCGAACTGGCT 59.729 47.619 0.00 0.00 41.31 4.75
84 87 2.192861 CAGCAACCGTCCCAGCAAA 61.193 57.895 0.00 0.00 0.00 3.68
85 88 2.594303 CAGCAACCGTCCCAGCAA 60.594 61.111 0.00 0.00 0.00 3.91
97 100 2.979676 CCAGAACCGCAGCAGCAA 60.980 61.111 0.82 0.00 42.27 3.91
126 129 1.599518 GCACACGGATTGGGTCACA 60.600 57.895 0.00 0.00 0.00 3.58
146 149 3.798650 CGGCCGAAATGCGAGCAA 61.799 61.111 24.07 0.00 44.57 3.91
171 174 0.397816 CCCAACCCCAAAGACACCAA 60.398 55.000 0.00 0.00 0.00 3.67
172 175 1.231641 CCCAACCCCAAAGACACCA 59.768 57.895 0.00 0.00 0.00 4.17
178 181 2.203684 AGCAGCCCAACCCCAAAG 60.204 61.111 0.00 0.00 0.00 2.77
191 194 3.274288 GGGGAGTTGAATTCTACAGCAG 58.726 50.000 19.82 0.00 0.00 4.24
228 240 0.690192 TGAGCAGAAATCCCACGGAA 59.310 50.000 0.00 0.00 34.34 4.30
247 259 3.571119 GCTCACTGCGCAGAATGT 58.429 55.556 42.03 19.66 39.31 2.71
275 292 1.657751 GAGCAAATTCCCACGGGAGC 61.658 60.000 4.68 5.46 46.06 4.70
287 304 1.672881 GCCTACAGAATGCGAGCAAAT 59.327 47.619 0.57 0.00 42.53 2.32
328 347 0.458260 AAACACAGAAAACCGCACCC 59.542 50.000 0.00 0.00 0.00 4.61
332 351 2.032924 AGCACTAAACACAGAAAACCGC 59.967 45.455 0.00 0.00 0.00 5.68
344 363 8.610035 AGTTACTGTAAAACTTCAGCACTAAAC 58.390 33.333 1.10 0.00 33.39 2.01
345 364 8.726870 AGTTACTGTAAAACTTCAGCACTAAA 57.273 30.769 1.10 0.00 33.39 1.85
346 365 8.202137 AGAGTTACTGTAAAACTTCAGCACTAA 58.798 33.333 1.10 0.00 37.31 2.24
347 366 7.723324 AGAGTTACTGTAAAACTTCAGCACTA 58.277 34.615 1.10 0.00 37.31 2.74
348 367 6.583562 AGAGTTACTGTAAAACTTCAGCACT 58.416 36.000 1.10 0.00 37.31 4.40
349 368 6.846325 AGAGTTACTGTAAAACTTCAGCAC 57.154 37.500 1.10 0.00 37.31 4.40
350 369 7.152645 CCTAGAGTTACTGTAAAACTTCAGCA 58.847 38.462 1.10 0.00 37.31 4.41
351 370 7.116519 CACCTAGAGTTACTGTAAAACTTCAGC 59.883 40.741 1.10 0.00 37.31 4.26
352 371 8.142551 ACACCTAGAGTTACTGTAAAACTTCAG 58.857 37.037 1.10 1.25 37.31 3.02
353 372 8.015185 ACACCTAGAGTTACTGTAAAACTTCA 57.985 34.615 1.10 0.00 37.31 3.02
360 379 3.441572 GCCGACACCTAGAGTTACTGTAA 59.558 47.826 0.00 0.00 0.00 2.41
373 392 2.386064 TAAAGTTGCGGCCGACACCT 62.386 55.000 33.48 21.04 0.00 4.00
397 416 1.937899 ACACGACGAACAGGAAAAAGG 59.062 47.619 0.00 0.00 0.00 3.11
398 417 2.347292 CGACACGACGAACAGGAAAAAG 60.347 50.000 0.00 0.00 35.09 2.27
403 422 2.640989 CCGACACGACGAACAGGA 59.359 61.111 0.00 0.00 35.09 3.86
444 463 3.875134 ACTACGCAAGCAAGTAAAACTGT 59.125 39.130 0.00 0.00 45.62 3.55
446 465 3.303791 GCACTACGCAAGCAAGTAAAACT 60.304 43.478 0.00 0.00 45.62 2.66
451 470 0.034198 TGGCACTACGCAAGCAAGTA 59.966 50.000 0.00 0.00 45.17 2.24
490 509 7.309867 CCATACCCAATAGCTTACGAGTAGATT 60.310 40.741 0.00 0.00 0.00 2.40
491 510 6.153000 CCATACCCAATAGCTTACGAGTAGAT 59.847 42.308 0.00 0.00 0.00 1.98
499 518 5.845391 TTTTGCCATACCCAATAGCTTAC 57.155 39.130 0.00 0.00 0.00 2.34
500 519 5.896678 ACATTTTGCCATACCCAATAGCTTA 59.103 36.000 0.00 0.00 0.00 3.09
512 531 5.936956 GTCCAAAATTCCACATTTTGCCATA 59.063 36.000 12.59 0.00 43.73 2.74
565 584 0.952984 AGGCTCGTGCTGAAGAAAGC 60.953 55.000 9.61 0.00 43.82 3.51
577 596 3.753434 CACTCCTCGCAGGCTCGT 61.753 66.667 6.32 0.00 34.61 4.18
578 597 3.691744 GACACTCCTCGCAGGCTCG 62.692 68.421 0.00 0.00 34.61 5.03
599 618 2.031769 TCATGCAGCAAGAACAGTTTCG 60.032 45.455 0.00 0.00 36.78 3.46
603 622 2.267174 AGTCATGCAGCAAGAACAGT 57.733 45.000 0.90 0.00 0.00 3.55
670 689 7.980062 TGCACATTTGAACTATTTAATCGCTA 58.020 30.769 0.00 0.00 0.00 4.26
728 748 7.016361 ACTAACAAACAAACTGATCTGTCAC 57.984 36.000 5.64 0.00 0.00 3.67
986 1009 1.077005 TGCCCATGGTAGCTCCTTTTT 59.923 47.619 11.73 0.00 37.07 1.94
1129 1152 4.617530 CGTTGAGGTCGAGTAATGGAAAGA 60.618 45.833 0.00 0.00 0.00 2.52
1166 1189 1.483827 AGATCGAGGATGAGCAGCAAA 59.516 47.619 0.00 0.00 0.00 3.68
1167 1190 1.068281 GAGATCGAGGATGAGCAGCAA 59.932 52.381 0.00 0.00 0.00 3.91
1168 1191 0.672889 GAGATCGAGGATGAGCAGCA 59.327 55.000 0.00 0.00 0.00 4.41
1201 1224 4.335416 AGTGCTAGTATGTTTGTGCCATT 58.665 39.130 0.00 0.00 0.00 3.16
1205 1228 5.447818 GGATCAAGTGCTAGTATGTTTGTGC 60.448 44.000 0.00 0.00 0.00 4.57
1208 1231 5.185454 TGGGATCAAGTGCTAGTATGTTTG 58.815 41.667 0.00 0.00 0.00 2.93
1288 1311 1.372128 GGCTGTCGCTTTGCTTTGG 60.372 57.895 0.00 0.00 36.09 3.28
1413 1436 5.857268 ACAGGACAAGAAAAATCCAAATGG 58.143 37.500 0.00 0.00 34.73 3.16
1550 1802 3.646637 AGGAATAGTGGAGGAATAACCCG 59.353 47.826 0.00 0.00 40.05 5.28
1554 1806 9.189156 CAATGAAAAGGAATAGTGGAGGAATAA 57.811 33.333 0.00 0.00 0.00 1.40
1687 1939 1.264288 GGACTTCAGCAACGTCTTTGG 59.736 52.381 0.00 0.00 35.51 3.28
1887 2141 6.151144 GGCAGTGAATTGAGGTTAACAATACT 59.849 38.462 8.10 0.00 37.04 2.12
1888 2142 6.072175 TGGCAGTGAATTGAGGTTAACAATAC 60.072 38.462 8.10 0.00 37.04 1.89
1925 2179 6.152831 CCATCAAAACTTTACTAGAAAGGGGG 59.847 42.308 14.91 5.99 0.00 5.40
2014 2268 5.973899 TGCAATTCTGTTAATAAGCACCA 57.026 34.783 0.00 0.00 0.00 4.17
2030 2284 8.338259 GTCGTGAAAGTAGATGATAATGCAATT 58.662 33.333 0.00 0.00 41.28 2.32
2055 2309 6.790319 ACAATAACCAAAGTTAGGAGGATGT 58.210 36.000 0.00 0.00 41.66 3.06
2123 2377 0.102844 GCAGCAGAGCTCCTCTACAG 59.897 60.000 10.93 0.00 38.99 2.74
2208 2462 2.863704 GCCAATGGTTCAGTTTGCACTC 60.864 50.000 0.00 0.00 0.00 3.51
2300 2554 4.883585 TGCTCGAAAGGCTGATTGAATAAT 59.116 37.500 0.00 0.00 0.00 1.28
2517 2772 5.085920 AGTTCACATGAATCCCATTTTCCA 58.914 37.500 0.00 0.00 36.33 3.53
2843 3100 2.351738 GGCAATTGGTTCTTTGTCCTCG 60.352 50.000 7.72 0.00 0.00 4.63
3036 3293 5.769835 AGGCCTGGATCATCAGAAAATAAA 58.230 37.500 3.11 0.00 36.93 1.40
3085 3355 9.006839 TCCAGCTCTTATAAAATGCATTATGAG 57.993 33.333 13.39 13.93 32.83 2.90
3097 3367 6.560003 TCTGATTGGTCCAGCTCTTATAAA 57.440 37.500 0.00 0.00 0.00 1.40
3105 3375 5.370880 AGGTTTATATCTGATTGGTCCAGCT 59.629 40.000 0.00 0.00 0.00 4.24
3188 3460 7.714377 ACATATCATCAAAAGACTGCCTAGAAG 59.286 37.037 0.00 0.00 0.00 2.85
3621 3894 1.988107 TGCAAGAGAAGGGTGGAAGAT 59.012 47.619 0.00 0.00 0.00 2.40
3624 3897 1.988107 AGATGCAAGAGAAGGGTGGAA 59.012 47.619 0.00 0.00 0.00 3.53
3631 3904 5.668471 TGGATTACTCAGATGCAAGAGAAG 58.332 41.667 17.70 3.65 35.83 2.85
3658 3931 7.770897 CCAGGCATACTTCTTAGTTCTTAACAT 59.229 37.037 0.00 0.00 35.78 2.71
3659 3932 7.103641 CCAGGCATACTTCTTAGTTCTTAACA 58.896 38.462 0.00 0.00 35.78 2.41
3668 3941 2.158755 CCCCACCAGGCATACTTCTTAG 60.159 54.545 0.00 0.00 0.00 2.18
3681 3954 2.265589 AGTTTCGTTTACCCCACCAG 57.734 50.000 0.00 0.00 0.00 4.00
3713 3986 4.147219 GCTATATAAAGCTGCCGGTTTG 57.853 45.455 14.55 0.03 40.71 2.93
3759 4032 5.429681 TGGCAAATAACTCTGCTAGGTAA 57.570 39.130 0.00 0.00 38.65 2.85
4023 4309 8.143193 TGGACAGTTCGTACTTTCTGTTATTAA 58.857 33.333 8.05 0.00 40.53 1.40
4100 4386 5.634020 GCATCCCATAGTTCAGTAACGATAC 59.366 44.000 0.00 0.00 40.73 2.24
4102 4388 4.100963 TGCATCCCATAGTTCAGTAACGAT 59.899 41.667 0.00 0.00 40.73 3.73
4103 4389 3.449377 TGCATCCCATAGTTCAGTAACGA 59.551 43.478 0.00 0.00 40.73 3.85
4104 4390 3.792401 TGCATCCCATAGTTCAGTAACG 58.208 45.455 0.00 0.00 40.73 3.18
4162 4452 6.642540 GCTTTTTCAGTACTTTAGCTTGCATT 59.357 34.615 0.00 0.00 0.00 3.56
4449 4747 2.498167 TCTGCAGCTTTCTGTTTCCTC 58.502 47.619 9.47 0.00 42.29 3.71
4593 4891 3.334910 TCCTCAGCCTCCTTATCATCA 57.665 47.619 0.00 0.00 0.00 3.07
4673 4971 3.410631 TCGTCTGGCTTGAACCATTTA 57.589 42.857 0.00 0.00 39.54 1.40
4857 5197 1.259609 TCGGATTACTTGTGGACCGT 58.740 50.000 0.00 0.00 40.93 4.83
4911 5251 3.788672 AAGGGATAGCCGCTTCTTG 57.211 52.632 0.00 0.00 43.56 3.02
5069 5414 4.989797 TGCCAACTACAAATGAAATGCTTG 59.010 37.500 0.00 0.00 0.00 4.01
5080 5425 4.177165 CAGAATGCATGCCAACTACAAA 57.823 40.909 16.68 0.00 0.00 2.83
5096 5441 7.756722 GCATGAACTGTTAATACTTTGCAGAAT 59.243 33.333 0.00 0.00 0.00 2.40
5099 5444 5.801947 GGCATGAACTGTTAATACTTTGCAG 59.198 40.000 0.00 0.00 0.00 4.41
5161 5506 3.770263 GCAGCTGCATGAACTGAAATA 57.230 42.857 33.36 0.00 41.59 1.40
5176 5563 1.072806 TGGACATCAGAAACTGCAGCT 59.927 47.619 15.27 0.00 0.00 4.24
5191 5578 5.750829 GCTGCTGCATACATGTAATGGACA 61.751 45.833 10.14 5.49 42.32 4.02
5265 5657 2.513259 TTCTTGGAACCGACGGGCT 61.513 57.895 20.00 4.40 36.48 5.19
5312 5704 4.778415 GCTCGGTCGCTGCTTCGA 62.778 66.667 0.00 3.54 35.95 3.71
5363 5755 2.019984 GTTGGTTGATCATCAGGCCTC 58.980 52.381 0.00 0.00 0.00 4.70
5373 5765 5.241506 TGAAATGGAACTGAGTTGGTTGATC 59.758 40.000 0.90 0.00 0.00 2.92
5379 5772 4.081406 TGGATGAAATGGAACTGAGTTGG 58.919 43.478 0.90 0.00 0.00 3.77
5381 5774 5.246981 TCTGGATGAAATGGAACTGAGTT 57.753 39.130 0.00 0.00 0.00 3.01
5386 5779 7.234355 ACTAAGTTTCTGGATGAAATGGAACT 58.766 34.615 0.00 0.00 45.19 3.01
5387 5780 7.174946 TGACTAAGTTTCTGGATGAAATGGAAC 59.825 37.037 0.00 0.00 45.19 3.62
5389 5782 6.778821 TGACTAAGTTTCTGGATGAAATGGA 58.221 36.000 0.00 0.00 45.19 3.41
5421 5814 1.260825 CACAGATGATGCAGCGACATC 59.739 52.381 18.24 18.24 45.51 3.06
5425 5818 1.204467 TGTACACAGATGATGCAGCGA 59.796 47.619 0.00 0.00 0.00 4.93
5427 5820 5.739752 TTTATGTACACAGATGATGCAGC 57.260 39.130 0.00 0.00 0.00 5.25
5428 5821 6.093909 TGGTTTTATGTACACAGATGATGCAG 59.906 38.462 0.00 0.00 0.00 4.41
5430 5823 6.435430 TGGTTTTATGTACACAGATGATGC 57.565 37.500 0.00 0.00 0.00 3.91
5497 5913 4.807039 CAACGCCTACCGACGGGG 62.807 72.222 20.00 11.92 41.02 5.73
5499 5915 4.430765 AGCAACGCCTACCGACGG 62.431 66.667 13.61 13.61 41.02 4.79
5503 5919 1.356527 GGTTACAGCAACGCCTACCG 61.357 60.000 0.00 0.00 44.21 4.02
5504 5920 0.320946 TGGTTACAGCAACGCCTACC 60.321 55.000 0.00 0.00 38.09 3.18
5505 5921 1.734163 ATGGTTACAGCAACGCCTAC 58.266 50.000 0.00 0.00 38.09 3.18
5506 5922 2.483014 AATGGTTACAGCAACGCCTA 57.517 45.000 0.00 0.00 38.09 3.93
5507 5923 2.081462 GTAATGGTTACAGCAACGCCT 58.919 47.619 0.00 0.00 38.09 5.52
5508 5924 1.131693 GGTAATGGTTACAGCAACGCC 59.868 52.381 2.68 0.00 38.09 5.68
5509 5925 2.081462 AGGTAATGGTTACAGCAACGC 58.919 47.619 2.68 0.00 38.09 4.84
5510 5926 3.331150 TGAGGTAATGGTTACAGCAACG 58.669 45.455 2.68 0.00 38.09 4.10
5513 5929 3.054434 AGCATGAGGTAATGGTTACAGCA 60.054 43.478 0.00 0.75 34.71 4.41
5514 5930 3.545703 AGCATGAGGTAATGGTTACAGC 58.454 45.455 0.00 0.00 34.71 4.40
5515 5931 4.576463 GGAAGCATGAGGTAATGGTTACAG 59.424 45.833 0.00 0.00 45.64 2.74
5516 5932 4.523083 GGAAGCATGAGGTAATGGTTACA 58.477 43.478 0.00 0.00 45.64 2.41
5517 5933 3.560068 CGGAAGCATGAGGTAATGGTTAC 59.440 47.826 0.00 1.98 45.64 2.50
5520 5936 1.559682 ACGGAAGCATGAGGTAATGGT 59.440 47.619 0.00 0.00 39.90 3.55
5541 5957 6.488006 AGAAGAAAACATACACACAGAATGCT 59.512 34.615 0.00 0.00 42.53 3.79
5542 5958 6.672147 AGAAGAAAACATACACACAGAATGC 58.328 36.000 0.00 0.00 42.53 3.56
5569 5990 2.414806 GTTCTTTCGGAAGAGTGGGTC 58.585 52.381 6.20 0.00 42.55 4.46
5571 5992 1.809684 GGTTCTTTCGGAAGAGTGGG 58.190 55.000 6.20 0.00 42.55 4.61
5577 5998 2.338500 CCTCTTCGGTTCTTTCGGAAG 58.662 52.381 0.00 0.00 42.26 3.46
5693 6117 2.851045 GGTCCCAACCACCACCAT 59.149 61.111 0.00 0.00 45.68 3.55
5712 6136 2.220653 ACATGGGGTATATGCATGGC 57.779 50.000 10.16 0.00 0.00 4.40
5718 6145 6.438741 AGTGAGAGACATACATGGGGTATATG 59.561 42.308 0.00 0.00 40.76 1.78
5723 6152 2.768527 CAGTGAGAGACATACATGGGGT 59.231 50.000 0.00 0.00 0.00 4.95
5734 6163 3.324993 CAGGAAGAAAGCAGTGAGAGAC 58.675 50.000 0.00 0.00 0.00 3.36
5753 6182 2.026449 AGAATCTGGGTGAAGGAAGCAG 60.026 50.000 0.00 0.00 0.00 4.24
5756 6185 4.566426 AGAAGAATCTGGGTGAAGGAAG 57.434 45.455 0.00 0.00 33.59 3.46
5784 6213 4.757657 TGGAACACGTTGTGCTTATACAAT 59.242 37.500 0.00 0.00 42.02 2.71
5804 6234 1.272037 TGGTCAAGCATGCAAGATGGA 60.272 47.619 21.98 0.00 0.00 3.41
5830 6260 4.513442 GCCACCACTTTCATCATACTACA 58.487 43.478 0.00 0.00 0.00 2.74
5831 6261 3.877508 GGCCACCACTTTCATCATACTAC 59.122 47.826 0.00 0.00 0.00 2.73
5832 6262 3.780294 AGGCCACCACTTTCATCATACTA 59.220 43.478 5.01 0.00 0.00 1.82
5833 6263 2.578021 AGGCCACCACTTTCATCATACT 59.422 45.455 5.01 0.00 0.00 2.12
5834 6264 3.004752 AGGCCACCACTTTCATCATAC 57.995 47.619 5.01 0.00 0.00 2.39
5835 6265 3.737559 AAGGCCACCACTTTCATCATA 57.262 42.857 5.01 0.00 0.00 2.15
5857 6287 0.319083 CATCCTGCTTTGGCTTTGCA 59.681 50.000 0.00 0.00 39.59 4.08
5923 6356 3.690745 GCTTTGGAGCCACTGCAT 58.309 55.556 7.71 0.00 43.29 3.96
5932 6365 1.228988 AAAGGGGGCTGCTTTGGAG 60.229 57.895 0.00 0.00 0.00 3.86
5970 6404 4.181051 GGCAGGTGGCTTTCAGTT 57.819 55.556 0.00 0.00 44.01 3.16
6004 6452 5.462729 CAGATTATCACACAGCTCAGACATC 59.537 44.000 0.00 0.00 0.00 3.06
6008 6456 5.128335 ACATCAGATTATCACACAGCTCAGA 59.872 40.000 0.00 0.00 0.00 3.27
6010 6458 5.114081 CACATCAGATTATCACACAGCTCA 58.886 41.667 0.00 0.00 0.00 4.26
6012 6460 3.875727 GCACATCAGATTATCACACAGCT 59.124 43.478 0.00 0.00 0.00 4.24
6033 6481 1.136891 ACAAAACCAGGAGCAAACAGC 59.863 47.619 0.00 0.00 46.19 4.40
6034 6482 2.689983 AGACAAAACCAGGAGCAAACAG 59.310 45.455 0.00 0.00 0.00 3.16
6035 6483 2.426738 CAGACAAAACCAGGAGCAAACA 59.573 45.455 0.00 0.00 0.00 2.83
6036 6484 2.687935 TCAGACAAAACCAGGAGCAAAC 59.312 45.455 0.00 0.00 0.00 2.93
6037 6485 3.011566 TCAGACAAAACCAGGAGCAAA 57.988 42.857 0.00 0.00 0.00 3.68
6038 6486 2.727123 TCAGACAAAACCAGGAGCAA 57.273 45.000 0.00 0.00 0.00 3.91
6041 6489 2.951642 TGCTTTCAGACAAAACCAGGAG 59.048 45.455 0.00 0.00 0.00 3.69
6043 6491 3.068590 ACATGCTTTCAGACAAAACCAGG 59.931 43.478 0.00 0.00 0.00 4.45
6075 6563 4.937620 CGCCACATACAGCATTATCCTAAT 59.062 41.667 0.00 0.00 0.00 1.73
6088 6578 1.188871 TCACCAGACCGCCACATACA 61.189 55.000 0.00 0.00 0.00 2.29
6091 6581 1.078214 CATCACCAGACCGCCACAT 60.078 57.895 0.00 0.00 0.00 3.21
6092 6582 2.213513 TCATCACCAGACCGCCACA 61.214 57.895 0.00 0.00 0.00 4.17
6097 6587 2.863401 TAATCGTCATCACCAGACCG 57.137 50.000 0.00 0.00 32.41 4.79
6102 6592 5.729510 TCAACAAGATAATCGTCATCACCA 58.270 37.500 0.00 0.00 0.00 4.17
6108 6598 6.910972 GTCGTATCTCAACAAGATAATCGTCA 59.089 38.462 0.00 0.00 46.22 4.35
6118 6608 1.891178 TCGCGTCGTATCTCAACAAG 58.109 50.000 5.77 0.00 0.00 3.16
6132 6622 3.521560 ACACATCACATTCTAATCGCGT 58.478 40.909 5.77 0.00 0.00 6.01
6150 6640 8.807667 AGAAACAAATCAATCAATTCTGACAC 57.192 30.769 0.00 0.00 33.30 3.67
6151 6641 9.251792 CAAGAAACAAATCAATCAATTCTGACA 57.748 29.630 0.00 0.00 33.30 3.58
6152 6642 9.252962 ACAAGAAACAAATCAATCAATTCTGAC 57.747 29.630 0.00 0.00 33.30 3.51
6153 6643 9.820725 AACAAGAAACAAATCAATCAATTCTGA 57.179 25.926 0.00 0.00 35.56 3.27
6154 6644 9.858247 CAACAAGAAACAAATCAATCAATTCTG 57.142 29.630 0.00 0.00 0.00 3.02
6155 6645 9.048446 CCAACAAGAAACAAATCAATCAATTCT 57.952 29.630 0.00 0.00 0.00 2.40
6156 6646 8.829612 ACCAACAAGAAACAAATCAATCAATTC 58.170 29.630 0.00 0.00 0.00 2.17
6157 6647 8.735692 ACCAACAAGAAACAAATCAATCAATT 57.264 26.923 0.00 0.00 0.00 2.32
6158 6648 8.735692 AACCAACAAGAAACAAATCAATCAAT 57.264 26.923 0.00 0.00 0.00 2.57
6159 6649 7.009999 CGAACCAACAAGAAACAAATCAATCAA 59.990 33.333 0.00 0.00 0.00 2.57
6160 6650 6.475076 CGAACCAACAAGAAACAAATCAATCA 59.525 34.615 0.00 0.00 0.00 2.57
6161 6651 6.475402 ACGAACCAACAAGAAACAAATCAATC 59.525 34.615 0.00 0.00 0.00 2.67
6162 6652 6.337356 ACGAACCAACAAGAAACAAATCAAT 58.663 32.000 0.00 0.00 0.00 2.57
6163 6653 5.715070 ACGAACCAACAAGAAACAAATCAA 58.285 33.333 0.00 0.00 0.00 2.57
6164 6654 5.317733 ACGAACCAACAAGAAACAAATCA 57.682 34.783 0.00 0.00 0.00 2.57
6165 6655 5.005299 CCAACGAACCAACAAGAAACAAATC 59.995 40.000 0.00 0.00 0.00 2.17
6166 6656 4.867608 CCAACGAACCAACAAGAAACAAAT 59.132 37.500 0.00 0.00 0.00 2.32
6167 6657 4.022242 TCCAACGAACCAACAAGAAACAAA 60.022 37.500 0.00 0.00 0.00 2.83
6168 6658 3.506455 TCCAACGAACCAACAAGAAACAA 59.494 39.130 0.00 0.00 0.00 2.83
6169 6659 3.082548 TCCAACGAACCAACAAGAAACA 58.917 40.909 0.00 0.00 0.00 2.83
6170 6660 3.768468 TCCAACGAACCAACAAGAAAC 57.232 42.857 0.00 0.00 0.00 2.78
6171 6661 3.129638 CCTTCCAACGAACCAACAAGAAA 59.870 43.478 0.00 0.00 0.00 2.52
6172 6662 2.685897 CCTTCCAACGAACCAACAAGAA 59.314 45.455 0.00 0.00 0.00 2.52
6173 6663 2.294074 CCTTCCAACGAACCAACAAGA 58.706 47.619 0.00 0.00 0.00 3.02
6174 6664 2.021457 ACCTTCCAACGAACCAACAAG 58.979 47.619 0.00 0.00 0.00 3.16
6175 6665 2.018515 GACCTTCCAACGAACCAACAA 58.981 47.619 0.00 0.00 0.00 2.83
6176 6666 1.065345 TGACCTTCCAACGAACCAACA 60.065 47.619 0.00 0.00 0.00 3.33
6177 6667 1.602377 CTGACCTTCCAACGAACCAAC 59.398 52.381 0.00 0.00 0.00 3.77
6178 6668 1.210967 ACTGACCTTCCAACGAACCAA 59.789 47.619 0.00 0.00 0.00 3.67
6179 6669 0.834612 ACTGACCTTCCAACGAACCA 59.165 50.000 0.00 0.00 0.00 3.67
6180 6670 1.226746 CACTGACCTTCCAACGAACC 58.773 55.000 0.00 0.00 0.00 3.62
6181 6671 1.949465 ACACTGACCTTCCAACGAAC 58.051 50.000 0.00 0.00 0.00 3.95
6182 6672 2.431419 TGTACACTGACCTTCCAACGAA 59.569 45.455 0.00 0.00 0.00 3.85
6183 6673 2.033372 TGTACACTGACCTTCCAACGA 58.967 47.619 0.00 0.00 0.00 3.85
6184 6674 2.519377 TGTACACTGACCTTCCAACG 57.481 50.000 0.00 0.00 0.00 4.10
6185 6675 4.448210 TCTTTGTACACTGACCTTCCAAC 58.552 43.478 0.00 0.00 0.00 3.77
6186 6676 4.764050 TCTTTGTACACTGACCTTCCAA 57.236 40.909 0.00 0.00 0.00 3.53
6187 6677 4.504864 CCATCTTTGTACACTGACCTTCCA 60.505 45.833 0.00 0.00 0.00 3.53
6188 6678 4.003648 CCATCTTTGTACACTGACCTTCC 58.996 47.826 0.00 0.00 0.00 3.46
6189 6679 3.437049 GCCATCTTTGTACACTGACCTTC 59.563 47.826 0.00 0.00 0.00 3.46
6190 6680 3.181445 TGCCATCTTTGTACACTGACCTT 60.181 43.478 0.00 0.00 0.00 3.50
6191 6681 2.371841 TGCCATCTTTGTACACTGACCT 59.628 45.455 0.00 0.00 0.00 3.85
6192 6682 2.778299 TGCCATCTTTGTACACTGACC 58.222 47.619 0.00 0.00 0.00 4.02
6193 6683 4.436050 CGATTGCCATCTTTGTACACTGAC 60.436 45.833 0.00 0.00 0.00 3.51
6194 6684 3.684305 CGATTGCCATCTTTGTACACTGA 59.316 43.478 0.00 0.00 0.00 3.41
6195 6685 3.181507 CCGATTGCCATCTTTGTACACTG 60.182 47.826 0.00 0.00 0.00 3.66
6196 6686 3.009723 CCGATTGCCATCTTTGTACACT 58.990 45.455 0.00 0.00 0.00 3.55
6197 6687 3.006940 TCCGATTGCCATCTTTGTACAC 58.993 45.455 0.00 0.00 0.00 2.90
6198 6688 3.342377 TCCGATTGCCATCTTTGTACA 57.658 42.857 0.00 0.00 0.00 2.90
6199 6689 4.695217 TTTCCGATTGCCATCTTTGTAC 57.305 40.909 0.00 0.00 0.00 2.90
6200 6690 5.417266 TCAATTTCCGATTGCCATCTTTGTA 59.583 36.000 0.00 0.00 0.00 2.41
6201 6691 4.220382 TCAATTTCCGATTGCCATCTTTGT 59.780 37.500 0.00 0.00 0.00 2.83
6202 6692 4.746729 TCAATTTCCGATTGCCATCTTTG 58.253 39.130 0.00 0.00 0.00 2.77
6203 6693 5.452356 GGATCAATTTCCGATTGCCATCTTT 60.452 40.000 0.00 0.00 0.00 2.52
6204 6694 4.038402 GGATCAATTTCCGATTGCCATCTT 59.962 41.667 0.00 0.00 0.00 2.40
6205 6695 3.571401 GGATCAATTTCCGATTGCCATCT 59.429 43.478 0.00 0.00 0.00 2.90
6206 6696 3.318839 TGGATCAATTTCCGATTGCCATC 59.681 43.478 0.00 0.00 38.74 3.51
6207 6697 3.298619 TGGATCAATTTCCGATTGCCAT 58.701 40.909 0.00 0.00 38.74 4.40
6208 6698 2.732763 TGGATCAATTTCCGATTGCCA 58.267 42.857 0.00 0.00 38.74 4.92
6209 6699 3.447742 GTTGGATCAATTTCCGATTGCC 58.552 45.455 0.00 0.00 38.74 4.52
6210 6700 3.108144 CGTTGGATCAATTTCCGATTGC 58.892 45.455 0.00 0.00 38.74 3.56
6211 6701 4.342772 GTCGTTGGATCAATTTCCGATTG 58.657 43.478 0.00 0.00 38.74 2.67
6212 6702 3.377172 GGTCGTTGGATCAATTTCCGATT 59.623 43.478 0.00 0.00 38.74 3.34
6213 6703 2.943033 GGTCGTTGGATCAATTTCCGAT 59.057 45.455 0.00 0.00 38.74 4.18
6214 6704 2.027561 AGGTCGTTGGATCAATTTCCGA 60.028 45.455 0.00 0.00 38.74 4.55
6215 6705 2.095853 CAGGTCGTTGGATCAATTTCCG 59.904 50.000 0.00 0.00 38.74 4.30
6216 6706 3.081804 ACAGGTCGTTGGATCAATTTCC 58.918 45.455 0.00 0.00 36.24 3.13
6217 6707 4.766404 AACAGGTCGTTGGATCAATTTC 57.234 40.909 0.00 0.00 36.12 2.17
6232 6722 2.684881 CTGCTGAACAAAGACAACAGGT 59.315 45.455 0.00 0.00 29.90 4.00
6233 6723 2.945008 TCTGCTGAACAAAGACAACAGG 59.055 45.455 0.00 0.00 33.02 4.00
6234 6724 3.374988 TGTCTGCTGAACAAAGACAACAG 59.625 43.478 13.78 0.00 45.45 3.16
6235 6725 3.342719 TGTCTGCTGAACAAAGACAACA 58.657 40.909 13.78 0.00 45.45 3.33
6238 6728 2.092968 ACCTGTCTGCTGAACAAAGACA 60.093 45.455 14.75 14.75 46.05 3.41
6239 6729 2.289002 CACCTGTCTGCTGAACAAAGAC 59.711 50.000 0.00 9.12 40.61 3.01
6240 6730 2.564771 CACCTGTCTGCTGAACAAAGA 58.435 47.619 0.00 0.00 0.00 2.52
6241 6731 1.605710 CCACCTGTCTGCTGAACAAAG 59.394 52.381 0.00 0.00 0.00 2.77
6242 6732 1.679139 CCACCTGTCTGCTGAACAAA 58.321 50.000 0.00 0.00 0.00 2.83
6243 6733 0.179020 CCCACCTGTCTGCTGAACAA 60.179 55.000 0.00 0.00 0.00 2.83
6244 6734 1.451504 CCCACCTGTCTGCTGAACA 59.548 57.895 0.00 0.00 0.00 3.18
6245 6735 1.968540 GCCCACCTGTCTGCTGAAC 60.969 63.158 0.00 0.00 0.00 3.18
6246 6736 2.431683 GCCCACCTGTCTGCTGAA 59.568 61.111 0.00 0.00 0.00 3.02
6247 6737 3.640407 GGCCCACCTGTCTGCTGA 61.640 66.667 0.00 0.00 0.00 4.26
6248 6738 4.729918 GGGCCCACCTGTCTGCTG 62.730 72.222 19.95 0.00 35.85 4.41
6252 6742 4.741239 ATCCGGGCCCACCTGTCT 62.741 66.667 24.92 0.00 41.25 3.41
6253 6743 4.176752 GATCCGGGCCCACCTGTC 62.177 72.222 24.92 8.26 41.25 3.51
6254 6744 2.907482 TATGATCCGGGCCCACCTGT 62.907 60.000 24.92 5.12 41.25 4.00
6255 6745 2.146724 TATGATCCGGGCCCACCTG 61.147 63.158 24.92 4.73 42.66 4.00
6256 6746 2.147387 GTATGATCCGGGCCCACCT 61.147 63.158 24.92 4.27 36.97 4.00
6257 6747 2.147387 AGTATGATCCGGGCCCACC 61.147 63.158 24.92 7.71 0.00 4.61
6258 6748 1.071471 CAGTATGATCCGGGCCCAC 59.929 63.158 24.92 10.66 39.69 4.61
6259 6749 1.074850 TCAGTATGATCCGGGCCCA 60.075 57.895 24.92 2.47 42.56 5.36
6260 6750 3.885814 TCAGTATGATCCGGGCCC 58.114 61.111 13.57 13.57 42.56 5.80
6270 6760 1.154197 CTCCATGCGCCATCAGTATG 58.846 55.000 4.18 0.00 37.54 2.39
6271 6761 0.604780 GCTCCATGCGCCATCAGTAT 60.605 55.000 4.18 0.00 0.00 2.12
6272 6762 1.227645 GCTCCATGCGCCATCAGTA 60.228 57.895 4.18 0.00 0.00 2.74
6273 6763 2.515523 GCTCCATGCGCCATCAGT 60.516 61.111 4.18 0.00 0.00 3.41
6282 6772 0.379669 CAAATCTGGTCGCTCCATGC 59.620 55.000 0.00 0.00 46.12 4.06
6283 6773 1.019673 CCAAATCTGGTCGCTCCATG 58.980 55.000 0.00 0.00 46.12 3.66
6284 6774 0.749454 GCCAAATCTGGTCGCTCCAT 60.749 55.000 0.00 0.00 46.12 3.41
6285 6775 1.377202 GCCAAATCTGGTCGCTCCA 60.377 57.895 0.00 0.00 45.53 3.86
6286 6776 1.078143 AGCCAAATCTGGTCGCTCC 60.078 57.895 0.00 0.00 45.53 4.70
6287 6777 0.107945 AGAGCCAAATCTGGTCGCTC 60.108 55.000 0.00 0.00 45.53 5.03
6288 6778 0.107945 GAGAGCCAAATCTGGTCGCT 60.108 55.000 0.00 0.00 45.53 4.93
6289 6779 0.107945 AGAGAGCCAAATCTGGTCGC 60.108 55.000 0.00 0.00 45.53 5.19
6290 6780 2.393271 AAGAGAGCCAAATCTGGTCG 57.607 50.000 0.00 0.00 45.53 4.79
6291 6781 3.938334 GAGAAAGAGAGCCAAATCTGGTC 59.062 47.826 0.00 0.00 45.53 4.02
6292 6782 3.308046 GGAGAAAGAGAGCCAAATCTGGT 60.308 47.826 0.00 0.00 45.53 4.00
6293 6783 3.277715 GGAGAAAGAGAGCCAAATCTGG 58.722 50.000 0.00 0.00 46.65 3.86
6294 6784 3.054508 AGGGAGAAAGAGAGCCAAATCTG 60.055 47.826 0.00 0.00 0.00 2.90
6295 6785 3.188773 AGGGAGAAAGAGAGCCAAATCT 58.811 45.455 0.00 0.00 0.00 2.40
6296 6786 3.199727 AGAGGGAGAAAGAGAGCCAAATC 59.800 47.826 0.00 0.00 0.00 2.17
6297 6787 3.188773 AGAGGGAGAAAGAGAGCCAAAT 58.811 45.455 0.00 0.00 0.00 2.32
6298 6788 2.569404 GAGAGGGAGAAAGAGAGCCAAA 59.431 50.000 0.00 0.00 0.00 3.28
6299 6789 2.183679 GAGAGGGAGAAAGAGAGCCAA 58.816 52.381 0.00 0.00 0.00 4.52
6300 6790 1.077828 TGAGAGGGAGAAAGAGAGCCA 59.922 52.381 0.00 0.00 0.00 4.75
6301 6791 1.480545 GTGAGAGGGAGAAAGAGAGCC 59.519 57.143 0.00 0.00 0.00 4.70
6302 6792 1.480545 GGTGAGAGGGAGAAAGAGAGC 59.519 57.143 0.00 0.00 0.00 4.09
6303 6793 2.813907 TGGTGAGAGGGAGAAAGAGAG 58.186 52.381 0.00 0.00 0.00 3.20
6304 6794 3.481559 ATGGTGAGAGGGAGAAAGAGA 57.518 47.619 0.00 0.00 0.00 3.10
6305 6795 3.871485 CAATGGTGAGAGGGAGAAAGAG 58.129 50.000 0.00 0.00 0.00 2.85
6306 6796 2.026822 GCAATGGTGAGAGGGAGAAAGA 60.027 50.000 0.00 0.00 0.00 2.52
6307 6797 2.290514 TGCAATGGTGAGAGGGAGAAAG 60.291 50.000 0.00 0.00 0.00 2.62
6308 6798 1.704628 TGCAATGGTGAGAGGGAGAAA 59.295 47.619 0.00 0.00 0.00 2.52
6309 6799 1.361204 TGCAATGGTGAGAGGGAGAA 58.639 50.000 0.00 0.00 0.00 2.87
6310 6800 1.588239 ATGCAATGGTGAGAGGGAGA 58.412 50.000 0.00 0.00 0.00 3.71
6311 6801 2.486191 GGTATGCAATGGTGAGAGGGAG 60.486 54.545 0.00 0.00 0.00 4.30
6312 6802 1.490490 GGTATGCAATGGTGAGAGGGA 59.510 52.381 0.00 0.00 0.00 4.20
6313 6803 1.492176 AGGTATGCAATGGTGAGAGGG 59.508 52.381 0.00 0.00 0.00 4.30
6314 6804 2.947652 CAAGGTATGCAATGGTGAGAGG 59.052 50.000 0.00 0.00 0.00 3.69
6315 6805 3.376234 CACAAGGTATGCAATGGTGAGAG 59.624 47.826 0.00 0.00 0.00 3.20
6316 6806 3.244875 ACACAAGGTATGCAATGGTGAGA 60.245 43.478 0.00 0.00 0.00 3.27
6317 6807 3.084039 ACACAAGGTATGCAATGGTGAG 58.916 45.455 0.00 0.00 0.00 3.51
6318 6808 2.819019 CACACAAGGTATGCAATGGTGA 59.181 45.455 0.00 0.00 0.00 4.02
6319 6809 2.671914 GCACACAAGGTATGCAATGGTG 60.672 50.000 0.00 0.00 39.23 4.17
6320 6810 1.545582 GCACACAAGGTATGCAATGGT 59.454 47.619 0.00 0.00 39.23 3.55
6321 6811 1.467883 CGCACACAAGGTATGCAATGG 60.468 52.381 0.32 0.00 39.39 3.16
6322 6812 1.199789 ACGCACACAAGGTATGCAATG 59.800 47.619 0.32 0.00 39.39 2.82
6323 6813 1.199789 CACGCACACAAGGTATGCAAT 59.800 47.619 0.32 0.00 39.39 3.56
6324 6814 0.590682 CACGCACACAAGGTATGCAA 59.409 50.000 0.32 0.00 39.39 4.08
6325 6815 0.533978 ACACGCACACAAGGTATGCA 60.534 50.000 0.32 0.00 39.39 3.96
6326 6816 0.110238 CACACGCACACAAGGTATGC 60.110 55.000 0.00 0.00 35.96 3.14
6327 6817 0.110238 GCACACGCACACAAGGTATG 60.110 55.000 0.00 0.00 38.36 2.39
6328 6818 0.250295 AGCACACGCACACAAGGTAT 60.250 50.000 0.00 0.00 42.27 2.73
6329 6819 0.462937 AAGCACACGCACACAAGGTA 60.463 50.000 0.00 0.00 42.27 3.08
6330 6820 1.312371 AAAGCACACGCACACAAGGT 61.312 50.000 0.00 0.00 42.27 3.50
6331 6821 0.866906 CAAAGCACACGCACACAAGG 60.867 55.000 0.00 0.00 42.27 3.61
6332 6822 1.473857 GCAAAGCACACGCACACAAG 61.474 55.000 0.00 0.00 42.27 3.16
6333 6823 1.515952 GCAAAGCACACGCACACAA 60.516 52.632 0.00 0.00 42.27 3.33
6334 6824 1.092345 TAGCAAAGCACACGCACACA 61.092 50.000 0.00 0.00 42.27 3.72
6335 6825 0.657368 GTAGCAAAGCACACGCACAC 60.657 55.000 0.00 0.00 42.27 3.82
6336 6826 0.813610 AGTAGCAAAGCACACGCACA 60.814 50.000 0.00 0.00 42.27 4.57
6337 6827 1.136336 GTAGTAGCAAAGCACACGCAC 60.136 52.381 0.00 0.00 42.27 5.34
6338 6828 1.144969 GTAGTAGCAAAGCACACGCA 58.855 50.000 0.00 0.00 42.27 5.24
6339 6829 1.144969 TGTAGTAGCAAAGCACACGC 58.855 50.000 0.00 0.00 38.99 5.34
6340 6830 4.151070 CAAATGTAGTAGCAAAGCACACG 58.849 43.478 0.00 0.00 0.00 4.49
6341 6831 5.108385 ACAAATGTAGTAGCAAAGCACAC 57.892 39.130 0.00 0.00 0.00 3.82
6342 6832 6.869315 TTACAAATGTAGTAGCAAAGCACA 57.131 33.333 0.00 0.00 0.00 4.57
6343 6833 7.305474 ACATTACAAATGTAGTAGCAAAGCAC 58.695 34.615 3.51 0.00 0.00 4.40
6344 6834 7.447374 ACATTACAAATGTAGTAGCAAAGCA 57.553 32.000 3.51 0.00 0.00 3.91
6345 6835 8.020819 TCAACATTACAAATGTAGTAGCAAAGC 58.979 33.333 5.75 0.00 0.00 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.