Multiple sequence alignment - TraesCS5D01G035600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G035600 chr5D 100.000 3309 0 0 1 3309 35182079 35178771 0.000000e+00 6111.0
1 TraesCS5D01G035600 chr5D 97.743 576 11 2 2401 2976 545786111 545786684 0.000000e+00 990.0
2 TraesCS5D01G035600 chr5D 96.690 574 19 0 2401 2974 493131294 493131867 0.000000e+00 955.0
3 TraesCS5D01G035600 chr5D 96.373 579 20 1 2403 2981 515574915 515575492 0.000000e+00 952.0
4 TraesCS5D01G035600 chr5D 89.397 547 47 7 13 557 29877093 29877630 0.000000e+00 678.0
5 TraesCS5D01G035600 chr5D 97.073 205 6 0 2979 3183 2852003 2851799 2.440000e-91 346.0
6 TraesCS5D01G035600 chr5D 90.164 122 12 0 1203 1324 41297068 41297189 3.420000e-35 159.0
7 TraesCS5D01G035600 chr5B 93.823 939 51 3 609 1547 26447472 26446541 0.000000e+00 1406.0
8 TraesCS5D01G035600 chr5B 91.304 598 38 5 12 606 26453152 26452566 0.000000e+00 804.0
9 TraesCS5D01G035600 chr5B 97.267 439 12 0 1915 2353 26445752 26445314 0.000000e+00 745.0
10 TraesCS5D01G035600 chr5B 80.618 356 38 21 997 1324 35288632 35288984 2.550000e-61 246.0
11 TraesCS5D01G035600 chr5B 83.516 91 14 1 2168 2258 703772102 703772013 2.120000e-12 84.2
12 TraesCS5D01G035600 chr5A 90.216 1063 65 13 561 1604 23853789 23852747 0.000000e+00 1351.0
13 TraesCS5D01G035600 chr5A 96.140 285 9 2 1913 2195 23852195 23851911 6.470000e-127 464.0
14 TraesCS5D01G035600 chr5A 96.296 189 7 0 2165 2353 23823669 23823481 8.920000e-81 311.0
15 TraesCS5D01G035600 chr5A 82.578 287 30 13 2027 2303 29627597 29627873 5.520000e-58 235.0
16 TraesCS5D01G035600 chr5A 90.164 122 12 0 1203 1324 29626824 29626945 3.420000e-35 159.0
17 TraesCS5D01G035600 chr5A 88.660 97 9 2 3211 3307 23823302 23823208 2.090000e-22 117.0
18 TraesCS5D01G035600 chr3D 95.541 628 23 5 2355 2981 584684467 584685090 0.000000e+00 1000.0
19 TraesCS5D01G035600 chr3D 90.566 530 43 5 13 539 8383296 8383821 0.000000e+00 695.0
20 TraesCS5D01G035600 chr3D 99.029 206 2 0 2979 3184 218554198 218553993 1.450000e-98 370.0
21 TraesCS5D01G035600 chr3D 88.350 309 32 3 1604 1910 577422920 577423226 5.220000e-98 368.0
22 TraesCS5D01G035600 chr3D 91.549 142 11 1 2162 2303 25523430 25523570 9.370000e-46 195.0
23 TraesCS5D01G035600 chr3D 92.437 119 9 0 1204 1322 25522326 25522444 1.580000e-38 171.0
24 TraesCS5D01G035600 chr7D 95.133 637 21 3 2355 2981 563973286 563972650 0.000000e+00 996.0
25 TraesCS5D01G035600 chr7D 95.513 624 22 5 2355 2975 614420680 614420060 0.000000e+00 992.0
26 TraesCS5D01G035600 chr7D 96.859 573 15 3 2404 2975 529692295 529691725 0.000000e+00 955.0
27 TraesCS5D01G035600 chr7D 88.889 549 48 8 12 556 513205195 513204656 0.000000e+00 664.0
28 TraesCS5D01G035600 chr7D 90.735 313 27 2 1598 1908 126710084 126710396 1.840000e-112 416.0
29 TraesCS5D01G035600 chr7D 91.447 304 24 2 1607 1908 550243658 550243355 1.840000e-112 416.0
30 TraesCS5D01G035600 chr7D 97.573 206 5 0 2979 3184 574955982 574955777 1.460000e-93 353.0
31 TraesCS5D01G035600 chr7D 95.455 220 7 3 2975 3194 605170394 605170178 6.800000e-92 348.0
32 TraesCS5D01G035600 chr7D 96.602 206 7 0 2979 3184 524869218 524869013 3.160000e-90 342.0
33 TraesCS5D01G035600 chr7D 78.272 382 62 15 951 1322 37664462 37664092 3.320000e-55 226.0
34 TraesCS5D01G035600 chr7D 89.437 142 14 1 2162 2303 37663105 37662965 9.440000e-41 178.0
35 TraesCS5D01G035600 chr4D 94.331 635 28 5 2353 2981 331074059 331074691 0.000000e+00 966.0
36 TraesCS5D01G035600 chr4D 88.599 307 33 2 1604 1908 320276712 320276406 4.030000e-99 372.0
37 TraesCS5D01G035600 chr4D 97.596 208 5 0 2976 3183 11907243 11907450 1.130000e-94 357.0
38 TraesCS5D01G035600 chr2D 95.681 602 23 2 2377 2976 51081347 51081947 0.000000e+00 965.0
39 TraesCS5D01G035600 chr2D 88.925 307 28 5 1605 1908 549926491 549926188 1.120000e-99 374.0
40 TraesCS5D01G035600 chr1D 91.621 549 32 6 12 556 228825476 228824938 0.000000e+00 747.0
41 TraesCS5D01G035600 chr1D 89.852 542 43 11 18 556 437274506 437273974 0.000000e+00 686.0
42 TraesCS5D01G035600 chr1D 91.503 306 24 2 1605 1908 425567673 425567368 1.420000e-113 420.0
43 TraesCS5D01G035600 chr4A 91.128 541 42 6 18 555 695770963 695770426 0.000000e+00 728.0
44 TraesCS5D01G035600 chr4A 79.217 332 52 12 997 1322 687315815 687316135 7.190000e-52 215.0
45 TraesCS5D01G035600 chr4A 93.617 141 8 1 2163 2303 687317203 687317342 3.350000e-50 209.0
46 TraesCS5D01G035600 chr1B 90.328 548 44 7 12 557 592854954 592854414 0.000000e+00 710.0
47 TraesCS5D01G035600 chr2B 89.071 549 47 11 18 557 528820142 528819598 0.000000e+00 669.0
48 TraesCS5D01G035600 chr2B 85.714 91 13 0 2168 2258 27495638 27495728 2.720000e-16 97.1
49 TraesCS5D01G035600 chr6D 91.205 307 25 2 1604 1908 319353126 319352820 1.840000e-112 416.0
50 TraesCS5D01G035600 chr6D 89.542 306 30 2 1605 1908 408942839 408943144 1.440000e-103 387.0
51 TraesCS5D01G035600 chr3B 87.937 315 31 5 1605 1917 829045970 829045661 6.750000e-97 364.0
52 TraesCS5D01G035600 chrUn 98.537 205 3 0 2979 3183 96544268 96544064 2.430000e-96 363.0
53 TraesCS5D01G035600 chrUn 97.129 209 6 0 2976 3184 69787424 69787632 1.460000e-93 353.0
54 TraesCS5D01G035600 chrUn 97.129 209 6 0 2976 3184 69788853 69789061 1.460000e-93 353.0
55 TraesCS5D01G035600 chrUn 80.412 194 19 12 2027 2210 290597479 290597295 2.680000e-26 130.0
56 TraesCS5D01G035600 chr2A 79.420 379 52 18 951 1322 720383122 720383481 9.170000e-61 244.0
57 TraesCS5D01G035600 chr2A 91.549 142 11 1 2162 2303 720384510 720384650 9.370000e-46 195.0
58 TraesCS5D01G035600 chr1A 85.714 91 13 0 2168 2258 517467465 517467375 2.720000e-16 97.1
59 TraesCS5D01G035600 chr6A 84.615 91 14 0 2168 2258 20719454 20719544 1.260000e-14 91.6
60 TraesCS5D01G035600 chr6A 94.872 39 2 0 2027 2065 1482348 1482386 9.910000e-06 62.1
61 TraesCS5D01G035600 chr4B 84.615 91 14 0 2168 2258 328585578 328585668 1.260000e-14 91.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G035600 chr5D 35178771 35182079 3308 True 6111.0 6111 100.0000 1 3309 1 chr5D.!!$R2 3308
1 TraesCS5D01G035600 chr5D 545786111 545786684 573 False 990.0 990 97.7430 2401 2976 1 chr5D.!!$F5 575
2 TraesCS5D01G035600 chr5D 493131294 493131867 573 False 955.0 955 96.6900 2401 2974 1 chr5D.!!$F3 573
3 TraesCS5D01G035600 chr5D 515574915 515575492 577 False 952.0 952 96.3730 2403 2981 1 chr5D.!!$F4 578
4 TraesCS5D01G035600 chr5D 29877093 29877630 537 False 678.0 678 89.3970 13 557 1 chr5D.!!$F1 544
5 TraesCS5D01G035600 chr5B 26445314 26447472 2158 True 1075.5 1406 95.5450 609 2353 2 chr5B.!!$R3 1744
6 TraesCS5D01G035600 chr5B 26452566 26453152 586 True 804.0 804 91.3040 12 606 1 chr5B.!!$R1 594
7 TraesCS5D01G035600 chr5A 23851911 23853789 1878 True 907.5 1351 93.1780 561 2195 2 chr5A.!!$R2 1634
8 TraesCS5D01G035600 chr3D 584684467 584685090 623 False 1000.0 1000 95.5410 2355 2981 1 chr3D.!!$F3 626
9 TraesCS5D01G035600 chr3D 8383296 8383821 525 False 695.0 695 90.5660 13 539 1 chr3D.!!$F1 526
10 TraesCS5D01G035600 chr7D 563972650 563973286 636 True 996.0 996 95.1330 2355 2981 1 chr7D.!!$R5 626
11 TraesCS5D01G035600 chr7D 614420060 614420680 620 True 992.0 992 95.5130 2355 2975 1 chr7D.!!$R8 620
12 TraesCS5D01G035600 chr7D 529691725 529692295 570 True 955.0 955 96.8590 2404 2975 1 chr7D.!!$R3 571
13 TraesCS5D01G035600 chr7D 513204656 513205195 539 True 664.0 664 88.8890 12 556 1 chr7D.!!$R1 544
14 TraesCS5D01G035600 chr7D 37662965 37664462 1497 True 202.0 226 83.8545 951 2303 2 chr7D.!!$R9 1352
15 TraesCS5D01G035600 chr4D 331074059 331074691 632 False 966.0 966 94.3310 2353 2981 1 chr4D.!!$F2 628
16 TraesCS5D01G035600 chr2D 51081347 51081947 600 False 965.0 965 95.6810 2377 2976 1 chr2D.!!$F1 599
17 TraesCS5D01G035600 chr1D 228824938 228825476 538 True 747.0 747 91.6210 12 556 1 chr1D.!!$R1 544
18 TraesCS5D01G035600 chr1D 437273974 437274506 532 True 686.0 686 89.8520 18 556 1 chr1D.!!$R3 538
19 TraesCS5D01G035600 chr4A 695770426 695770963 537 True 728.0 728 91.1280 18 555 1 chr4A.!!$R1 537
20 TraesCS5D01G035600 chr4A 687315815 687317342 1527 False 212.0 215 86.4170 997 2303 2 chr4A.!!$F1 1306
21 TraesCS5D01G035600 chr1B 592854414 592854954 540 True 710.0 710 90.3280 12 557 1 chr1B.!!$R1 545
22 TraesCS5D01G035600 chr2B 528819598 528820142 544 True 669.0 669 89.0710 18 557 1 chr2B.!!$R1 539
23 TraesCS5D01G035600 chrUn 69787424 69789061 1637 False 353.0 353 97.1290 2976 3184 2 chrUn.!!$F1 208
24 TraesCS5D01G035600 chr2A 720383122 720384650 1528 False 219.5 244 85.4845 951 2303 2 chr2A.!!$F1 1352

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
681 704 0.306228 CGCACACACACAATTTCCGA 59.694 50.0 0.0 0.0 0.0 4.55 F
1360 1403 0.322975 CCCCTCTGGTCTCTGTTGTG 59.677 60.0 0.0 0.0 0.0 3.33 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1664 2003 0.110486 CATGGGGATTTACCGAGGGG 59.890 60.0 0.0 0.0 40.11 4.79 R
3245 5464 0.098200 CACATCAACAGCGAGCCATG 59.902 55.0 0.0 0.0 0.00 3.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
43 44 2.362397 ACAGTGACAGAGAACGTCATGT 59.638 45.455 0.00 0.00 44.70 3.21
47 48 2.102420 TGACAGAGAACGTCATGTTGGT 59.898 45.455 0.00 0.00 42.09 3.67
61 62 2.684943 TGTTGGTTGAGGTCTGAGGTA 58.315 47.619 0.00 0.00 0.00 3.08
293 296 6.296489 CCAGGGTGAAAACTTAAGATCTAGGT 60.296 42.308 10.09 0.00 0.00 3.08
321 327 3.696898 GATGACGGTGCTTCTACACTAG 58.303 50.000 0.00 0.00 40.52 2.57
350 356 0.534203 AGGCGTCGCTTTTGGAGAAA 60.534 50.000 18.11 0.00 0.00 2.52
543 564 8.882415 TCTCCGCGATATTAATATATTTTCCC 57.118 34.615 8.23 0.00 0.00 3.97
681 704 0.306228 CGCACACACACAATTTCCGA 59.694 50.000 0.00 0.00 0.00 4.55
786 813 8.195436 TGTTTCTATTATGTAGTCTGTACTGCC 58.805 37.037 0.00 0.00 37.52 4.85
787 814 6.555812 TCTATTATGTAGTCTGTACTGCCG 57.444 41.667 0.00 0.00 37.52 5.69
796 823 0.526211 CTGTACTGCCGCTGTGAGTA 59.474 55.000 12.77 0.00 0.00 2.59
811 838 0.533032 GAGTAGCTTGCTTCTCCCGT 59.467 55.000 15.38 0.00 0.00 5.28
911 938 4.161295 ATAAGCTCAGCGCCGCCA 62.161 61.111 4.98 0.00 40.39 5.69
1089 1118 2.360350 CTGCACAGGGTCCGCATT 60.360 61.111 0.00 0.00 34.63 3.56
1098 1127 1.067582 GGTCCGCATTACCCTCTCG 59.932 63.158 0.00 0.00 0.00 4.04
1104 1133 1.202533 CGCATTACCCTCTCGTCCAAT 60.203 52.381 0.00 0.00 0.00 3.16
1106 1135 3.491964 CGCATTACCCTCTCGTCCAATAA 60.492 47.826 0.00 0.00 0.00 1.40
1340 1382 7.290813 AGAAGGTGATTACTCTTTTGGTCTTT 58.709 34.615 0.00 0.00 0.00 2.52
1360 1403 0.322975 CCCCTCTGGTCTCTGTTGTG 59.677 60.000 0.00 0.00 0.00 3.33
1453 1509 2.832129 GTGGGTCAGGAAGTGTCTATGA 59.168 50.000 0.00 0.00 0.00 2.15
1495 1551 3.449018 ACGATAGGACTGAATTGCACTCT 59.551 43.478 0.00 0.00 43.77 3.24
1537 1594 5.064441 AGCAGATGAGGCAAAACATTTAC 57.936 39.130 0.00 0.00 0.00 2.01
1562 1782 3.190118 CACTGAGATGCTTTTGGGTCTTC 59.810 47.826 0.00 0.00 0.00 2.87
1604 1849 4.877823 TCATGCCATCACAGTATTGTTCTC 59.122 41.667 0.00 0.00 34.62 2.87
1605 1850 4.284829 TGCCATCACAGTATTGTTCTCA 57.715 40.909 0.00 0.00 34.62 3.27
1606 1851 4.650734 TGCCATCACAGTATTGTTCTCAA 58.349 39.130 0.00 0.00 34.62 3.02
1607 1852 4.696877 TGCCATCACAGTATTGTTCTCAAG 59.303 41.667 0.00 0.00 36.97 3.02
1608 1853 4.095483 GCCATCACAGTATTGTTCTCAAGG 59.905 45.833 0.00 0.00 36.97 3.61
1612 1857 7.255590 CCATCACAGTATTGTTCTCAAGGTTTT 60.256 37.037 0.00 0.00 36.97 2.43
1613 1858 7.026631 TCACAGTATTGTTCTCAAGGTTTTG 57.973 36.000 0.00 0.00 36.97 2.44
1614 1859 6.039270 TCACAGTATTGTTCTCAAGGTTTTGG 59.961 38.462 0.00 0.00 36.97 3.28
1616 1861 6.379988 ACAGTATTGTTCTCAAGGTTTTGGTT 59.620 34.615 0.00 0.00 36.97 3.67
1617 1862 7.558444 ACAGTATTGTTCTCAAGGTTTTGGTTA 59.442 33.333 0.00 0.00 36.97 2.85
1618 1863 7.860872 CAGTATTGTTCTCAAGGTTTTGGTTAC 59.139 37.037 0.00 0.00 36.97 2.50
1619 1864 5.585820 TTGTTCTCAAGGTTTTGGTTACC 57.414 39.130 0.00 0.00 34.97 2.85
1620 1865 3.628487 TGTTCTCAAGGTTTTGGTTACCG 59.372 43.478 0.00 0.00 40.69 4.02
1623 1868 3.390639 TCTCAAGGTTTTGGTTACCGGTA 59.609 43.478 11.16 11.16 40.69 4.02
1625 1870 3.390639 TCAAGGTTTTGGTTACCGGTAGA 59.609 43.478 15.20 3.41 40.69 2.59
1627 1872 4.436113 AGGTTTTGGTTACCGGTAGAAA 57.564 40.909 15.20 12.09 40.69 2.52
1628 1873 4.989277 AGGTTTTGGTTACCGGTAGAAAT 58.011 39.130 15.20 0.00 40.69 2.17
1630 1875 5.834742 AGGTTTTGGTTACCGGTAGAAATTT 59.165 36.000 15.20 0.00 40.69 1.82
1644 1983 6.974622 CGGTAGAAATTTTGAGATTTCCCATG 59.025 38.462 6.70 0.00 43.70 3.66
1649 1988 8.314021 AGAAATTTTGAGATTTCCCATGGTTAC 58.686 33.333 11.73 0.00 43.70 2.50
1650 1989 5.993748 TTTTGAGATTTCCCATGGTTACC 57.006 39.130 11.73 0.00 0.00 2.85
1653 1992 0.661020 GATTTCCCATGGTTACCGCG 59.339 55.000 11.73 0.00 0.00 6.46
1655 1994 0.612229 TTTCCCATGGTTACCGCGTA 59.388 50.000 11.73 0.00 0.00 4.42
1658 1997 1.209990 TCCCATGGTTACCGCGTATTT 59.790 47.619 11.73 0.00 0.00 1.40
1659 1998 1.600485 CCCATGGTTACCGCGTATTTC 59.400 52.381 11.73 0.00 0.00 2.17
1660 1999 1.600485 CCATGGTTACCGCGTATTTCC 59.400 52.381 4.92 1.35 0.00 3.13
1661 2000 1.259507 CATGGTTACCGCGTATTTCCG 59.740 52.381 4.92 0.00 0.00 4.30
1664 2003 0.025384 GTTACCGCGTATTTCCGTGC 59.975 55.000 4.92 0.00 37.03 5.34
1665 2004 1.083242 TTACCGCGTATTTCCGTGCC 61.083 55.000 4.92 0.00 37.03 5.01
1669 2145 2.178235 GCGTATTTCCGTGCCCCTC 61.178 63.158 0.00 0.00 0.00 4.30
1673 2149 0.687098 TATTTCCGTGCCCCTCGGTA 60.687 55.000 4.36 0.00 46.86 4.02
1675 2151 1.766625 TTTCCGTGCCCCTCGGTAAA 61.767 55.000 4.36 2.21 46.86 2.01
1681 2157 2.380285 GCCCCTCGGTAAATCCCCA 61.380 63.158 0.00 0.00 0.00 4.96
1683 2159 0.110486 CCCCTCGGTAAATCCCCATG 59.890 60.000 0.00 0.00 0.00 3.66
1688 2164 0.884704 CGGTAAATCCCCATGCCGAG 60.885 60.000 0.00 0.00 41.45 4.63
1689 2165 1.172812 GGTAAATCCCCATGCCGAGC 61.173 60.000 0.00 0.00 0.00 5.03
1754 2230 9.358406 TCGATTTATAGTAAAGTACATGGAGGA 57.642 33.333 0.00 0.00 0.00 3.71
1759 2235 9.877222 TTATAGTAAAGTACATGGAGGATCTGA 57.123 33.333 0.00 0.00 33.73 3.27
1760 2236 8.964533 ATAGTAAAGTACATGGAGGATCTGAT 57.035 34.615 0.00 0.00 33.73 2.90
1761 2237 7.682787 AGTAAAGTACATGGAGGATCTGATT 57.317 36.000 0.00 0.00 33.73 2.57
1762 2238 8.783660 AGTAAAGTACATGGAGGATCTGATTA 57.216 34.615 0.00 0.00 33.73 1.75
1763 2239 9.213777 AGTAAAGTACATGGAGGATCTGATTAA 57.786 33.333 0.00 0.00 33.73 1.40
1765 2241 8.915057 AAAGTACATGGAGGATCTGATTAATG 57.085 34.615 0.00 0.00 33.73 1.90
1772 2248 4.942483 GGAGGATCTGATTAATGCCATGAG 59.058 45.833 0.00 0.00 33.73 2.90
1780 2256 4.641541 TGATTAATGCCATGAGAGTTGGTG 59.358 41.667 0.00 0.00 36.57 4.17
1784 2260 1.160137 GCCATGAGAGTTGGTGTGAC 58.840 55.000 0.00 0.00 36.57 3.67
1788 2264 0.821517 TGAGAGTTGGTGTGACGTGT 59.178 50.000 0.00 0.00 0.00 4.49
1795 2271 0.531090 TGGTGTGACGTGTTGGTAGC 60.531 55.000 0.00 0.00 0.00 3.58
1796 2272 0.531090 GGTGTGACGTGTTGGTAGCA 60.531 55.000 0.00 0.00 0.00 3.49
1797 2273 1.292061 GTGTGACGTGTTGGTAGCAA 58.708 50.000 2.54 2.54 0.00 3.91
1798 2274 1.004292 GTGTGACGTGTTGGTAGCAAC 60.004 52.381 26.90 26.90 35.75 4.17
1799 2275 0.584876 GTGACGTGTTGGTAGCAACC 59.415 55.000 29.46 20.70 46.98 3.77
1800 2276 0.466543 TGACGTGTTGGTAGCAACCT 59.533 50.000 29.46 15.29 46.91 3.50
1801 2277 1.687660 TGACGTGTTGGTAGCAACCTA 59.312 47.619 29.46 13.49 46.91 3.08
1802 2278 2.288579 TGACGTGTTGGTAGCAACCTAG 60.289 50.000 29.46 22.61 46.91 3.02
1803 2279 1.690352 ACGTGTTGGTAGCAACCTAGT 59.310 47.619 29.46 23.14 46.91 2.57
1804 2280 2.103601 ACGTGTTGGTAGCAACCTAGTT 59.896 45.455 29.46 10.90 46.91 2.24
1805 2281 2.735134 CGTGTTGGTAGCAACCTAGTTC 59.265 50.000 29.46 14.40 46.91 3.01
1806 2282 3.072211 GTGTTGGTAGCAACCTAGTTCC 58.928 50.000 29.46 7.82 46.91 3.62
1807 2283 2.976882 TGTTGGTAGCAACCTAGTTCCT 59.023 45.455 29.46 0.00 46.91 3.36
1816 2292 5.887754 AGCAACCTAGTTCCTATTTTGGAA 58.112 37.500 0.00 0.00 43.16 3.53
1817 2293 5.946377 AGCAACCTAGTTCCTATTTTGGAAG 59.054 40.000 0.00 0.00 45.62 3.46
1820 2296 6.063496 ACCTAGTTCCTATTTTGGAAGGTC 57.937 41.667 0.00 0.00 45.62 3.85
1823 2299 5.843019 AGTTCCTATTTTGGAAGGTCTCA 57.157 39.130 0.00 0.00 45.62 3.27
1824 2300 5.810095 AGTTCCTATTTTGGAAGGTCTCAG 58.190 41.667 0.00 0.00 45.62 3.35
1825 2301 4.844349 TCCTATTTTGGAAGGTCTCAGG 57.156 45.455 0.00 0.00 34.30 3.86
1828 2304 4.944317 CCTATTTTGGAAGGTCTCAGGTTC 59.056 45.833 0.00 0.00 0.00 3.62
1832 2308 4.453480 TTGGAAGGTCTCAGGTTCAATT 57.547 40.909 0.00 0.00 0.00 2.32
1834 2310 3.138283 TGGAAGGTCTCAGGTTCAATTGT 59.862 43.478 5.13 0.00 0.00 2.71
1835 2311 3.753797 GGAAGGTCTCAGGTTCAATTGTC 59.246 47.826 5.13 0.32 0.00 3.18
1836 2312 3.425162 AGGTCTCAGGTTCAATTGTCC 57.575 47.619 5.13 9.48 0.00 4.02
1839 2315 3.139077 GTCTCAGGTTCAATTGTCCGTT 58.861 45.455 5.13 0.00 0.00 4.44
1845 2321 4.023279 CAGGTTCAATTGTCCGTTCATTCA 60.023 41.667 5.13 0.00 0.00 2.57
1847 2323 5.243730 AGGTTCAATTGTCCGTTCATTCATT 59.756 36.000 5.13 0.00 0.00 2.57
1849 2325 7.040062 AGGTTCAATTGTCCGTTCATTCATTTA 60.040 33.333 5.13 0.00 0.00 1.40
1850 2326 7.759433 GGTTCAATTGTCCGTTCATTCATTTAT 59.241 33.333 5.13 0.00 0.00 1.40
1852 2328 8.909708 TCAATTGTCCGTTCATTCATTTATTC 57.090 30.769 5.13 0.00 0.00 1.75
1853 2329 7.696035 TCAATTGTCCGTTCATTCATTTATTCG 59.304 33.333 5.13 0.00 0.00 3.34
1854 2330 6.729391 TTGTCCGTTCATTCATTTATTCGA 57.271 33.333 0.00 0.00 0.00 3.71
1855 2331 6.729391 TGTCCGTTCATTCATTTATTCGAA 57.271 33.333 0.00 0.00 0.00 3.71
1856 2332 7.315247 TGTCCGTTCATTCATTTATTCGAAT 57.685 32.000 16.15 16.15 32.04 3.34
1857 2333 7.757526 TGTCCGTTCATTCATTTATTCGAATT 58.242 30.769 17.19 0.00 29.38 2.17
1858 2334 7.908082 TGTCCGTTCATTCATTTATTCGAATTC 59.092 33.333 17.19 0.00 29.38 2.17
1859 2335 7.908082 GTCCGTTCATTCATTTATTCGAATTCA 59.092 33.333 17.19 3.60 29.38 2.57
1860 2336 8.454894 TCCGTTCATTCATTTATTCGAATTCAA 58.545 29.630 17.19 10.20 29.38 2.69
1902 2407 9.542462 TTCGATCAAAATATTCTCGGTATTTCT 57.458 29.630 0.00 0.00 32.21 2.52
1903 2408 9.193133 TCGATCAAAATATTCTCGGTATTTCTC 57.807 33.333 0.00 0.00 32.21 2.87
1904 2409 8.156553 CGATCAAAATATTCTCGGTATTTCTCG 58.843 37.037 0.00 0.00 32.21 4.04
1905 2410 7.709269 TCAAAATATTCTCGGTATTTCTCGG 57.291 36.000 0.00 0.00 32.21 4.63
1907 2412 8.415553 TCAAAATATTCTCGGTATTTCTCGGTA 58.584 33.333 0.00 0.00 32.21 4.02
1911 2492 5.840243 TTCTCGGTATTTCTCGGTATTCA 57.160 39.130 0.00 0.00 0.00 2.57
2192 2905 1.165270 CAACACCTGGGATCGGTTTC 58.835 55.000 0.00 0.00 30.82 2.78
2276 2989 3.083349 CCATCACCCTCGAGCCCA 61.083 66.667 6.99 0.00 0.00 5.36
2312 3025 2.169352 GTGACCATCAGCCAGTAGTCAT 59.831 50.000 0.00 0.00 36.70 3.06
2339 3052 0.323629 GCTACCCTACCACAACAGCA 59.676 55.000 0.00 0.00 0.00 4.41
2610 3334 1.151668 CCTCGTTTCCAAGTCTGCAG 58.848 55.000 7.63 7.63 0.00 4.41
2704 3428 7.247728 GTGACACATTTCACTGTTTGAGTTTA 58.752 34.615 0.00 0.00 42.36 2.01
2869 3594 6.723298 TTAGTTTGACCATTGTTTGACCAT 57.277 33.333 0.00 0.00 0.00 3.55
2871 3596 6.331369 AGTTTGACCATTGTTTGACCATAG 57.669 37.500 0.00 0.00 0.00 2.23
2922 3647 3.520317 TCCAGATCTTAAAAGCCCCGTAA 59.480 43.478 0.00 0.00 0.00 3.18
2967 3692 7.938563 TGAGGATTTTGAAAATGTTTAACGG 57.061 32.000 8.03 0.00 0.00 4.44
2974 3699 3.321396 TGAAAATGTTTAACGGGGTTCCC 59.679 43.478 0.00 0.00 41.09 3.97
3028 5247 2.413310 AAGCCCATTAGTACCGGTTG 57.587 50.000 15.04 3.82 0.00 3.77
3054 5273 1.378119 CAACCGGGACTAAAGGGCC 60.378 63.158 6.32 0.00 44.23 5.80
3086 5305 0.938008 GACTAATGCCTTAGCCGCAC 59.062 55.000 8.50 0.00 39.49 5.34
3092 5311 2.047655 CCTTAGCCGCACGAACCA 60.048 61.111 0.00 0.00 0.00 3.67
3115 5334 2.945668 GACCAATGCTCACATTAGTCCC 59.054 50.000 6.20 0.00 44.37 4.46
3184 5403 4.273148 AGCCCTGTTTTGTACTAGTGAG 57.727 45.455 5.39 0.00 0.00 3.51
3185 5404 3.901844 AGCCCTGTTTTGTACTAGTGAGA 59.098 43.478 5.39 0.00 0.00 3.27
3186 5405 4.021016 AGCCCTGTTTTGTACTAGTGAGAG 60.021 45.833 5.39 0.00 0.00 3.20
3187 5406 4.021368 GCCCTGTTTTGTACTAGTGAGAGA 60.021 45.833 5.39 0.00 0.00 3.10
3188 5407 5.715070 CCCTGTTTTGTACTAGTGAGAGAG 58.285 45.833 5.39 0.00 0.00 3.20
3189 5408 5.477291 CCCTGTTTTGTACTAGTGAGAGAGA 59.523 44.000 5.39 0.00 0.00 3.10
3190 5409 6.349777 CCCTGTTTTGTACTAGTGAGAGAGAG 60.350 46.154 5.39 0.00 0.00 3.20
3191 5410 6.431543 CCTGTTTTGTACTAGTGAGAGAGAGA 59.568 42.308 5.39 0.00 0.00 3.10
3192 5411 7.361713 CCTGTTTTGTACTAGTGAGAGAGAGAG 60.362 44.444 5.39 0.00 0.00 3.20
3193 5412 7.225011 TGTTTTGTACTAGTGAGAGAGAGAGA 58.775 38.462 5.39 0.00 0.00 3.10
3194 5413 7.389330 TGTTTTGTACTAGTGAGAGAGAGAGAG 59.611 40.741 5.39 0.00 0.00 3.20
3195 5414 6.614694 TTGTACTAGTGAGAGAGAGAGAGT 57.385 41.667 5.39 0.00 0.00 3.24
3196 5415 5.972935 TGTACTAGTGAGAGAGAGAGAGTG 58.027 45.833 5.39 0.00 0.00 3.51
3197 5416 5.482526 TGTACTAGTGAGAGAGAGAGAGTGT 59.517 44.000 5.39 0.00 0.00 3.55
3198 5417 4.832248 ACTAGTGAGAGAGAGAGAGTGTG 58.168 47.826 0.00 0.00 0.00 3.82
3199 5418 3.788227 AGTGAGAGAGAGAGAGTGTGT 57.212 47.619 0.00 0.00 0.00 3.72
3200 5419 3.411446 AGTGAGAGAGAGAGAGTGTGTG 58.589 50.000 0.00 0.00 0.00 3.82
3201 5420 3.146066 GTGAGAGAGAGAGAGTGTGTGT 58.854 50.000 0.00 0.00 0.00 3.72
3202 5421 3.058293 GTGAGAGAGAGAGAGTGTGTGTG 60.058 52.174 0.00 0.00 0.00 3.82
3203 5422 3.146066 GAGAGAGAGAGAGTGTGTGTGT 58.854 50.000 0.00 0.00 0.00 3.72
3204 5423 2.884012 AGAGAGAGAGAGTGTGTGTGTG 59.116 50.000 0.00 0.00 0.00 3.82
3205 5424 2.621055 GAGAGAGAGAGTGTGTGTGTGT 59.379 50.000 0.00 0.00 0.00 3.72
3206 5425 2.360483 AGAGAGAGAGTGTGTGTGTGTG 59.640 50.000 0.00 0.00 0.00 3.82
3207 5426 1.202463 AGAGAGAGTGTGTGTGTGTGC 60.202 52.381 0.00 0.00 0.00 4.57
3208 5427 0.528466 AGAGAGTGTGTGTGTGTGCG 60.528 55.000 0.00 0.00 0.00 5.34
3209 5428 2.094126 GAGAGTGTGTGTGTGTGCGC 62.094 60.000 0.00 0.00 0.00 6.09
3210 5429 3.491508 GAGTGTGTGTGTGTGCGCG 62.492 63.158 0.00 0.00 0.00 6.86
3229 5448 4.943591 GCGTGTGCGTGTGCTGTG 62.944 66.667 0.00 0.00 43.34 3.66
3230 5449 4.297891 CGTGTGCGTGTGCTGTGG 62.298 66.667 0.00 0.00 43.34 4.17
3231 5450 2.894879 GTGTGCGTGTGCTGTGGA 60.895 61.111 0.00 0.00 43.34 4.02
3232 5451 2.110835 TGTGCGTGTGCTGTGGAT 59.889 55.556 0.00 0.00 43.34 3.41
3233 5452 1.525765 TGTGCGTGTGCTGTGGATT 60.526 52.632 0.00 0.00 43.34 3.01
3234 5453 1.081906 GTGCGTGTGCTGTGGATTG 60.082 57.895 0.00 0.00 43.34 2.67
3235 5454 2.260154 TGCGTGTGCTGTGGATTGG 61.260 57.895 0.00 0.00 43.34 3.16
3236 5455 1.965930 GCGTGTGCTGTGGATTGGA 60.966 57.895 0.00 0.00 38.39 3.53
3237 5456 1.308069 GCGTGTGCTGTGGATTGGAT 61.308 55.000 0.00 0.00 38.39 3.41
3238 5457 0.448990 CGTGTGCTGTGGATTGGATG 59.551 55.000 0.00 0.00 0.00 3.51
3239 5458 1.538047 GTGTGCTGTGGATTGGATGT 58.462 50.000 0.00 0.00 0.00 3.06
3240 5459 1.888512 GTGTGCTGTGGATTGGATGTT 59.111 47.619 0.00 0.00 0.00 2.71
3241 5460 2.297033 GTGTGCTGTGGATTGGATGTTT 59.703 45.455 0.00 0.00 0.00 2.83
3242 5461 3.505680 GTGTGCTGTGGATTGGATGTTTA 59.494 43.478 0.00 0.00 0.00 2.01
3243 5462 4.158394 GTGTGCTGTGGATTGGATGTTTAT 59.842 41.667 0.00 0.00 0.00 1.40
3244 5463 5.356751 GTGTGCTGTGGATTGGATGTTTATA 59.643 40.000 0.00 0.00 0.00 0.98
3245 5464 5.356751 TGTGCTGTGGATTGGATGTTTATAC 59.643 40.000 0.00 0.00 0.00 1.47
3246 5465 5.356751 GTGCTGTGGATTGGATGTTTATACA 59.643 40.000 0.00 0.00 38.95 2.29
3248 5467 6.039605 TGCTGTGGATTGGATGTTTATACATG 59.960 38.462 3.33 0.00 44.90 3.21
3249 5468 6.515531 GCTGTGGATTGGATGTTTATACATGG 60.516 42.308 3.33 0.00 44.90 3.66
3250 5469 5.301551 TGTGGATTGGATGTTTATACATGGC 59.698 40.000 3.33 0.00 44.90 4.40
3251 5470 5.536161 GTGGATTGGATGTTTATACATGGCT 59.464 40.000 3.33 0.00 44.90 4.75
3252 5471 5.769662 TGGATTGGATGTTTATACATGGCTC 59.230 40.000 3.33 0.00 44.90 4.70
3253 5472 5.106555 GGATTGGATGTTTATACATGGCTCG 60.107 44.000 3.33 0.00 44.90 5.03
3254 5473 3.138304 TGGATGTTTATACATGGCTCGC 58.862 45.455 3.33 0.00 44.90 5.03
3255 5474 3.181455 TGGATGTTTATACATGGCTCGCT 60.181 43.478 3.33 0.00 44.90 4.93
3256 5475 3.187227 GGATGTTTATACATGGCTCGCTG 59.813 47.826 3.33 0.00 44.90 5.18
3257 5476 3.260475 TGTTTATACATGGCTCGCTGT 57.740 42.857 0.00 0.00 0.00 4.40
3258 5477 3.605634 TGTTTATACATGGCTCGCTGTT 58.394 40.909 0.00 0.00 0.00 3.16
3259 5478 3.373748 TGTTTATACATGGCTCGCTGTTG 59.626 43.478 0.00 0.00 0.00 3.33
3260 5479 3.535280 TTATACATGGCTCGCTGTTGA 57.465 42.857 0.00 0.00 0.00 3.18
3261 5480 2.627515 ATACATGGCTCGCTGTTGAT 57.372 45.000 0.00 0.00 0.00 2.57
3262 5481 1.655484 TACATGGCTCGCTGTTGATG 58.345 50.000 0.00 0.00 0.00 3.07
3263 5482 0.321919 ACATGGCTCGCTGTTGATGT 60.322 50.000 0.00 0.00 0.00 3.06
3264 5483 0.098200 CATGGCTCGCTGTTGATGTG 59.902 55.000 0.00 0.00 0.00 3.21
3265 5484 0.321919 ATGGCTCGCTGTTGATGTGT 60.322 50.000 0.00 0.00 0.00 3.72
3266 5485 0.534877 TGGCTCGCTGTTGATGTGTT 60.535 50.000 0.00 0.00 0.00 3.32
3267 5486 0.593128 GGCTCGCTGTTGATGTGTTT 59.407 50.000 0.00 0.00 0.00 2.83
3268 5487 1.001378 GGCTCGCTGTTGATGTGTTTT 60.001 47.619 0.00 0.00 0.00 2.43
3269 5488 2.225491 GGCTCGCTGTTGATGTGTTTTA 59.775 45.455 0.00 0.00 0.00 1.52
3270 5489 3.482786 GCTCGCTGTTGATGTGTTTTAG 58.517 45.455 0.00 0.00 0.00 1.85
3271 5490 3.186409 GCTCGCTGTTGATGTGTTTTAGA 59.814 43.478 0.00 0.00 0.00 2.10
3272 5491 4.142816 GCTCGCTGTTGATGTGTTTTAGAT 60.143 41.667 0.00 0.00 0.00 1.98
3273 5492 5.617751 GCTCGCTGTTGATGTGTTTTAGATT 60.618 40.000 0.00 0.00 0.00 2.40
3274 5493 6.312399 TCGCTGTTGATGTGTTTTAGATTT 57.688 33.333 0.00 0.00 0.00 2.17
3275 5494 6.142139 TCGCTGTTGATGTGTTTTAGATTTG 58.858 36.000 0.00 0.00 0.00 2.32
3276 5495 5.343058 CGCTGTTGATGTGTTTTAGATTTGG 59.657 40.000 0.00 0.00 0.00 3.28
3277 5496 6.215845 GCTGTTGATGTGTTTTAGATTTGGT 58.784 36.000 0.00 0.00 0.00 3.67
3278 5497 6.701400 GCTGTTGATGTGTTTTAGATTTGGTT 59.299 34.615 0.00 0.00 0.00 3.67
3279 5498 7.306749 GCTGTTGATGTGTTTTAGATTTGGTTG 60.307 37.037 0.00 0.00 0.00 3.77
3280 5499 6.478344 TGTTGATGTGTTTTAGATTTGGTTGC 59.522 34.615 0.00 0.00 0.00 4.17
3281 5500 6.154203 TGATGTGTTTTAGATTTGGTTGCA 57.846 33.333 0.00 0.00 0.00 4.08
3282 5501 6.757237 TGATGTGTTTTAGATTTGGTTGCAT 58.243 32.000 0.00 0.00 0.00 3.96
3283 5502 7.215789 TGATGTGTTTTAGATTTGGTTGCATT 58.784 30.769 0.00 0.00 0.00 3.56
3284 5503 7.714377 TGATGTGTTTTAGATTTGGTTGCATTT 59.286 29.630 0.00 0.00 0.00 2.32
3285 5504 7.475771 TGTGTTTTAGATTTGGTTGCATTTC 57.524 32.000 0.00 0.00 0.00 2.17
3286 5505 7.271511 TGTGTTTTAGATTTGGTTGCATTTCT 58.728 30.769 0.00 0.00 0.00 2.52
3287 5506 7.224362 TGTGTTTTAGATTTGGTTGCATTTCTG 59.776 33.333 0.00 0.00 0.00 3.02
3288 5507 7.224557 GTGTTTTAGATTTGGTTGCATTTCTGT 59.775 33.333 0.00 0.00 0.00 3.41
3289 5508 8.417106 TGTTTTAGATTTGGTTGCATTTCTGTA 58.583 29.630 0.00 0.00 0.00 2.74
3290 5509 8.915654 GTTTTAGATTTGGTTGCATTTCTGTAG 58.084 33.333 0.00 0.00 0.00 2.74
3291 5510 7.994425 TTAGATTTGGTTGCATTTCTGTAGA 57.006 32.000 0.00 0.00 0.00 2.59
3292 5511 6.506500 AGATTTGGTTGCATTTCTGTAGAG 57.493 37.500 0.00 0.00 0.00 2.43
3293 5512 6.240894 AGATTTGGTTGCATTTCTGTAGAGA 58.759 36.000 0.00 0.00 0.00 3.10
3294 5513 5.947228 TTTGGTTGCATTTCTGTAGAGAG 57.053 39.130 0.00 0.00 0.00 3.20
3295 5514 3.338249 TGGTTGCATTTCTGTAGAGAGC 58.662 45.455 0.00 0.00 0.00 4.09
3296 5515 2.349886 GGTTGCATTTCTGTAGAGAGCG 59.650 50.000 0.00 0.00 0.00 5.03
3297 5516 1.645034 TGCATTTCTGTAGAGAGCGC 58.355 50.000 0.00 0.00 0.00 5.92
3298 5517 0.574454 GCATTTCTGTAGAGAGCGCG 59.426 55.000 0.00 0.00 0.00 6.86
3299 5518 1.914634 CATTTCTGTAGAGAGCGCGT 58.085 50.000 8.43 0.00 0.00 6.01
3300 5519 1.849219 CATTTCTGTAGAGAGCGCGTC 59.151 52.381 8.43 2.67 0.00 5.19
3301 5520 0.179197 TTTCTGTAGAGAGCGCGTCG 60.179 55.000 8.43 0.00 0.00 5.12
3302 5521 1.296755 TTCTGTAGAGAGCGCGTCGT 61.297 55.000 8.43 0.00 0.00 4.34
3303 5522 1.134901 CTGTAGAGAGCGCGTCGTT 59.865 57.895 8.43 1.11 0.00 3.85
3304 5523 0.372679 CTGTAGAGAGCGCGTCGTTA 59.627 55.000 8.43 0.19 0.00 3.18
3305 5524 1.003759 CTGTAGAGAGCGCGTCGTTAT 60.004 52.381 8.43 0.00 0.00 1.89
3306 5525 1.399440 TGTAGAGAGCGCGTCGTTATT 59.601 47.619 8.43 0.00 0.00 1.40
3307 5526 2.159476 TGTAGAGAGCGCGTCGTTATTT 60.159 45.455 8.43 0.00 0.00 1.40
3308 5527 1.992170 AGAGAGCGCGTCGTTATTTT 58.008 45.000 8.43 0.00 0.00 1.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.127194 TGTCTTCACTATGGTCGCTATTTCT 59.873 40.000 0.00 0.00 0.00 2.52
1 2 5.348986 TGTCTTCACTATGGTCGCTATTTC 58.651 41.667 0.00 0.00 0.00 2.17
2 3 5.105310 ACTGTCTTCACTATGGTCGCTATTT 60.105 40.000 0.00 0.00 0.00 1.40
3 4 4.402793 ACTGTCTTCACTATGGTCGCTATT 59.597 41.667 0.00 0.00 0.00 1.73
4 5 3.954904 ACTGTCTTCACTATGGTCGCTAT 59.045 43.478 0.00 0.00 0.00 2.97
5 6 3.128764 CACTGTCTTCACTATGGTCGCTA 59.871 47.826 0.00 0.00 0.00 4.26
6 7 2.094494 CACTGTCTTCACTATGGTCGCT 60.094 50.000 0.00 0.00 0.00 4.93
7 8 2.094700 TCACTGTCTTCACTATGGTCGC 60.095 50.000 0.00 0.00 0.00 5.19
8 9 3.057526 TGTCACTGTCTTCACTATGGTCG 60.058 47.826 0.00 0.00 0.00 4.79
9 10 4.218635 TCTGTCACTGTCTTCACTATGGTC 59.781 45.833 0.00 0.00 0.00 4.02
10 11 4.152647 TCTGTCACTGTCTTCACTATGGT 58.847 43.478 0.00 0.00 0.00 3.55
15 16 3.243234 CGTTCTCTGTCACTGTCTTCACT 60.243 47.826 0.00 0.00 0.00 3.41
43 44 3.650942 ACAATACCTCAGACCTCAACCAA 59.349 43.478 0.00 0.00 0.00 3.67
47 48 6.461092 CGCTATTACAATACCTCAGACCTCAA 60.461 42.308 0.00 0.00 0.00 3.02
61 62 5.455056 AAGACTCGATCCGCTATTACAAT 57.545 39.130 0.00 0.00 0.00 2.71
246 249 1.936547 GAAGATCCGCGCTCTCAAAAT 59.063 47.619 5.56 0.00 0.00 1.82
350 356 2.537143 AGACAACACCCGAAGTCCTAT 58.463 47.619 0.00 0.00 0.00 2.57
433 447 7.922811 ACAGCCAAAAACAATAAGAAGAAGAAG 59.077 33.333 0.00 0.00 0.00 2.85
542 563 3.245048 GGCAACACATTTTTCGACAAAGG 59.755 43.478 7.12 7.12 0.00 3.11
543 564 3.245048 GGGCAACACATTTTTCGACAAAG 59.755 43.478 2.86 0.00 39.74 2.77
763 790 6.514541 GCGGCAGTACAGACTACATAATAGAA 60.515 42.308 0.00 0.00 33.32 2.10
786 813 0.718343 GAAGCAAGCTACTCACAGCG 59.282 55.000 0.00 0.00 46.52 5.18
787 814 1.999024 GAGAAGCAAGCTACTCACAGC 59.001 52.381 0.00 0.00 42.12 4.40
796 823 1.004440 GTCACGGGAGAAGCAAGCT 60.004 57.895 0.00 0.00 0.00 3.74
846 873 2.045926 GCCGTTGGATCTGCTGGT 60.046 61.111 0.00 0.00 0.00 4.00
911 938 4.835891 CCGGTAGGCGAGGGAGGT 62.836 72.222 0.00 0.00 0.00 3.85
1031 1060 2.672996 CCACCTTGCCGGACTTGG 60.673 66.667 5.05 3.30 36.31 3.61
1032 1061 2.672996 CCCACCTTGCCGGACTTG 60.673 66.667 5.05 0.00 36.31 3.16
1089 1118 2.684881 GACGTTATTGGACGAGAGGGTA 59.315 50.000 4.29 0.00 45.47 3.69
1098 1127 3.367025 CGAGGTTCTTGACGTTATTGGAC 59.633 47.826 0.00 0.00 0.00 4.02
1104 1133 3.057736 CCTTCTCGAGGTTCTTGACGTTA 60.058 47.826 13.56 0.00 40.95 3.18
1106 1135 1.269998 CCTTCTCGAGGTTCTTGACGT 59.730 52.381 13.56 0.00 40.95 4.34
1274 1316 0.883833 GTGATGTTGAGCACCTTGGG 59.116 55.000 0.00 0.00 31.96 4.12
1340 1382 0.191064 ACAACAGAGACCAGAGGGGA 59.809 55.000 0.00 0.00 41.15 4.81
1360 1403 4.996758 ACAAAGCAAATAAGCAAATGGGAC 59.003 37.500 0.00 0.00 36.85 4.46
1453 1509 6.671614 TCGTCTAAACAGACAACAACAATT 57.328 33.333 5.70 0.00 38.65 2.32
1495 1551 1.206849 TCAGCACGCTATCATCACCAA 59.793 47.619 0.00 0.00 0.00 3.67
1537 1594 1.542915 CCCAAAAGCATCTCAGTGGTG 59.457 52.381 0.00 0.00 0.00 4.17
1562 1782 5.735324 CATGAGTGCAATTTAGAGACATCG 58.265 41.667 0.00 0.00 0.00 3.84
1593 1837 7.013942 GGTAACCAAAACCTTGAGAACAATACT 59.986 37.037 0.00 0.00 35.37 2.12
1604 1849 3.742385 TCTACCGGTAACCAAAACCTTG 58.258 45.455 16.65 0.00 34.66 3.61
1605 1850 4.436113 TTCTACCGGTAACCAAAACCTT 57.564 40.909 16.65 0.00 34.66 3.50
1606 1851 4.436113 TTTCTACCGGTAACCAAAACCT 57.564 40.909 16.65 0.00 34.66 3.50
1607 1852 5.710513 AATTTCTACCGGTAACCAAAACC 57.289 39.130 16.65 0.00 0.00 3.27
1608 1853 7.201835 TCAAAATTTCTACCGGTAACCAAAAC 58.798 34.615 16.65 0.00 0.00 2.43
1612 1857 5.867330 TCTCAAAATTTCTACCGGTAACCA 58.133 37.500 16.65 2.12 0.00 3.67
1613 1858 6.997239 ATCTCAAAATTTCTACCGGTAACC 57.003 37.500 16.65 0.00 0.00 2.85
1614 1859 7.966753 GGAAATCTCAAAATTTCTACCGGTAAC 59.033 37.037 16.65 0.00 42.63 2.50
1616 1861 6.600427 GGGAAATCTCAAAATTTCTACCGGTA 59.400 38.462 14.95 14.95 42.63 4.02
1617 1862 5.417894 GGGAAATCTCAAAATTTCTACCGGT 59.582 40.000 13.98 13.98 42.63 5.28
1618 1863 5.417580 TGGGAAATCTCAAAATTTCTACCGG 59.582 40.000 0.00 0.00 42.63 5.28
1619 1864 6.509418 TGGGAAATCTCAAAATTTCTACCG 57.491 37.500 8.70 0.00 42.63 4.02
1620 1865 7.093333 ACCATGGGAAATCTCAAAATTTCTACC 60.093 37.037 18.09 4.34 42.63 3.18
1623 1868 6.940430 ACCATGGGAAATCTCAAAATTTCT 57.060 33.333 18.09 0.00 42.63 2.52
1625 1870 7.394016 GGTAACCATGGGAAATCTCAAAATTT 58.606 34.615 18.09 0.00 0.00 1.82
1627 1872 5.127031 CGGTAACCATGGGAAATCTCAAAAT 59.873 40.000 18.09 0.00 0.00 1.82
1628 1873 4.461081 CGGTAACCATGGGAAATCTCAAAA 59.539 41.667 18.09 0.00 0.00 2.44
1630 1875 3.616219 CGGTAACCATGGGAAATCTCAA 58.384 45.455 18.09 0.00 0.00 3.02
1644 1983 0.646895 CACGGAAATACGCGGTAACC 59.353 55.000 12.47 6.30 37.37 2.85
1649 1988 3.569690 GGGCACGGAAATACGCGG 61.570 66.667 12.47 0.00 37.37 6.46
1650 1989 3.569690 GGGGCACGGAAATACGCG 61.570 66.667 3.53 3.53 37.37 6.01
1653 1992 4.120085 CGAGGGGCACGGAAATAC 57.880 61.111 0.00 0.00 0.00 1.89
1660 1999 1.523032 GGATTTACCGAGGGGCACG 60.523 63.158 0.00 0.00 36.48 5.34
1661 2000 1.153025 GGGATTTACCGAGGGGCAC 60.153 63.158 0.00 0.00 40.11 5.01
1664 2003 0.110486 CATGGGGATTTACCGAGGGG 59.890 60.000 0.00 0.00 40.11 4.79
1665 2004 0.537371 GCATGGGGATTTACCGAGGG 60.537 60.000 0.00 0.00 40.11 4.30
1669 2145 0.884704 CTCGGCATGGGGATTTACCG 60.885 60.000 0.00 0.00 41.92 4.02
1673 2149 0.614415 TTTGCTCGGCATGGGGATTT 60.614 50.000 0.00 0.00 38.76 2.17
1675 2151 0.614415 TTTTTGCTCGGCATGGGGAT 60.614 50.000 0.00 0.00 38.76 3.85
1728 2204 9.358406 TCCTCCATGTACTTTACTATAAATCGA 57.642 33.333 0.00 0.00 0.00 3.59
1741 2217 6.939163 GCATTAATCAGATCCTCCATGTACTT 59.061 38.462 0.00 0.00 0.00 2.24
1742 2218 6.471146 GCATTAATCAGATCCTCCATGTACT 58.529 40.000 0.00 0.00 0.00 2.73
1743 2219 5.645497 GGCATTAATCAGATCCTCCATGTAC 59.355 44.000 0.00 0.00 0.00 2.90
1746 2222 4.659115 TGGCATTAATCAGATCCTCCATG 58.341 43.478 0.00 0.00 0.00 3.66
1750 2226 5.802465 TCTCATGGCATTAATCAGATCCTC 58.198 41.667 0.00 0.00 0.00 3.71
1752 2228 5.558818 ACTCTCATGGCATTAATCAGATCC 58.441 41.667 0.00 0.00 0.00 3.36
1754 2230 5.768662 CCAACTCTCATGGCATTAATCAGAT 59.231 40.000 0.00 0.00 0.00 2.90
1755 2231 5.128205 CCAACTCTCATGGCATTAATCAGA 58.872 41.667 0.00 0.00 0.00 3.27
1756 2232 4.885907 ACCAACTCTCATGGCATTAATCAG 59.114 41.667 0.00 0.00 41.89 2.90
1757 2233 4.641541 CACCAACTCTCATGGCATTAATCA 59.358 41.667 0.00 0.00 41.89 2.57
1758 2234 4.641989 ACACCAACTCTCATGGCATTAATC 59.358 41.667 0.00 0.00 41.89 1.75
1759 2235 4.400251 CACACCAACTCTCATGGCATTAAT 59.600 41.667 0.00 0.00 41.89 1.40
1760 2236 3.758023 CACACCAACTCTCATGGCATTAA 59.242 43.478 0.00 0.00 41.89 1.40
1761 2237 3.008923 TCACACCAACTCTCATGGCATTA 59.991 43.478 0.00 0.00 41.89 1.90
1762 2238 2.165167 CACACCAACTCTCATGGCATT 58.835 47.619 0.00 0.00 41.89 3.56
1763 2239 1.352017 TCACACCAACTCTCATGGCAT 59.648 47.619 0.00 0.00 41.89 4.40
1764 2240 0.764271 TCACACCAACTCTCATGGCA 59.236 50.000 0.00 0.00 41.89 4.92
1765 2241 1.160137 GTCACACCAACTCTCATGGC 58.840 55.000 0.00 0.00 41.89 4.40
1772 2248 0.655733 CCAACACGTCACACCAACTC 59.344 55.000 0.00 0.00 0.00 3.01
1784 2260 6.596015 AGGAACTAGGTTGCTACCAACACG 62.596 50.000 19.71 5.18 45.66 4.49
1788 2264 6.382919 AAATAGGAACTAGGTTGCTACCAA 57.617 37.500 19.71 0.00 45.99 3.67
1801 2277 5.280727 CCTGAGACCTTCCAAAATAGGAACT 60.281 44.000 0.00 0.00 42.56 3.01
1802 2278 4.944317 CCTGAGACCTTCCAAAATAGGAAC 59.056 45.833 0.00 0.00 42.56 3.62
1803 2279 4.601857 ACCTGAGACCTTCCAAAATAGGAA 59.398 41.667 0.00 0.00 45.12 3.36
1804 2280 4.175962 ACCTGAGACCTTCCAAAATAGGA 58.824 43.478 0.00 0.00 35.45 2.94
1805 2281 4.576330 ACCTGAGACCTTCCAAAATAGG 57.424 45.455 0.00 0.00 37.56 2.57
1806 2282 5.560724 TGAACCTGAGACCTTCCAAAATAG 58.439 41.667 0.00 0.00 0.00 1.73
1807 2283 5.576563 TGAACCTGAGACCTTCCAAAATA 57.423 39.130 0.00 0.00 0.00 1.40
1816 2292 2.289694 CGGACAATTGAACCTGAGACCT 60.290 50.000 13.59 0.00 0.00 3.85
1817 2293 2.076863 CGGACAATTGAACCTGAGACC 58.923 52.381 13.59 0.90 0.00 3.85
1820 2296 3.138304 TGAACGGACAATTGAACCTGAG 58.862 45.455 13.59 5.56 0.00 3.35
1823 2299 4.141287 TGAATGAACGGACAATTGAACCT 58.859 39.130 13.59 0.57 0.00 3.50
1824 2300 4.497473 TGAATGAACGGACAATTGAACC 57.503 40.909 13.59 13.53 0.00 3.62
1825 2301 8.687824 ATAAATGAATGAACGGACAATTGAAC 57.312 30.769 13.59 5.68 0.00 3.18
1828 2304 7.696035 TCGAATAAATGAATGAACGGACAATTG 59.304 33.333 3.24 3.24 0.00 2.32
1832 2308 6.729391 TTCGAATAAATGAATGAACGGACA 57.271 33.333 0.00 0.00 0.00 4.02
1834 2310 7.980062 TGAATTCGAATAAATGAATGAACGGA 58.020 30.769 11.83 0.00 35.13 4.69
1835 2311 8.613613 TTGAATTCGAATAAATGAATGAACGG 57.386 30.769 11.83 0.00 35.13 4.44
1876 2352 9.542462 AGAAATACCGAGAATATTTTGATCGAA 57.458 29.630 12.18 0.00 33.39 3.71
1879 2355 8.436200 CCGAGAAATACCGAGAATATTTTGATC 58.564 37.037 0.00 0.00 33.39 2.92
1885 2390 8.582437 TGAATACCGAGAAATACCGAGAATATT 58.418 33.333 0.00 0.00 0.00 1.28
1892 2397 6.713903 ACTAGATGAATACCGAGAAATACCGA 59.286 38.462 0.00 0.00 0.00 4.69
1901 2406 8.185505 GGCTCTTTATACTAGATGAATACCGAG 58.814 40.741 0.00 0.00 0.00 4.63
1902 2407 7.668469 TGGCTCTTTATACTAGATGAATACCGA 59.332 37.037 0.00 0.00 0.00 4.69
1903 2408 7.827701 TGGCTCTTTATACTAGATGAATACCG 58.172 38.462 0.00 0.00 0.00 4.02
1907 2412 9.941325 CTCAATGGCTCTTTATACTAGATGAAT 57.059 33.333 0.00 0.00 0.00 2.57
1911 2492 7.291182 ACACCTCAATGGCTCTTTATACTAGAT 59.709 37.037 0.00 0.00 40.22 1.98
2276 2989 3.432588 CACCTCGACCTCGACGCT 61.433 66.667 0.00 0.00 44.22 5.07
2312 3025 0.639943 TGGTAGGGTAGCATGAGGGA 59.360 55.000 0.00 0.00 0.00 4.20
2339 3052 8.855804 TCCTTTAGTCCTAGATTAAAGATGGT 57.144 34.615 16.66 0.00 41.30 3.55
2497 3221 5.658198 AGATGATTTGGAATGATGAGGGA 57.342 39.130 0.00 0.00 0.00 4.20
2610 3334 8.617809 TCTTACTATTGTCAGGAAAACAACAAC 58.382 33.333 0.00 0.00 39.29 3.32
2892 3617 4.095632 GCTTTTAAGATCTGGAGAGGCAAC 59.904 45.833 0.00 0.00 0.00 4.17
2974 3699 1.586154 GGTTCATGGCACGAACAGGG 61.586 60.000 25.43 0.00 43.70 4.45
2977 3702 1.963855 CCGGTTCATGGCACGAACA 60.964 57.895 25.43 0.00 43.70 3.18
3054 5273 0.909623 ATTAGTCCCGGTTCACCTGG 59.090 55.000 0.00 0.00 41.25 4.45
3086 5305 0.321564 TGAGCATTGGTCCTGGTTCG 60.322 55.000 12.99 0.00 0.00 3.95
3184 5403 2.621055 ACACACACACACTCTCTCTCTC 59.379 50.000 0.00 0.00 0.00 3.20
3185 5404 2.360483 CACACACACACACTCTCTCTCT 59.640 50.000 0.00 0.00 0.00 3.10
3186 5405 2.736978 CACACACACACACTCTCTCTC 58.263 52.381 0.00 0.00 0.00 3.20
3187 5406 1.202463 GCACACACACACACTCTCTCT 60.202 52.381 0.00 0.00 0.00 3.10
3188 5407 1.212616 GCACACACACACACTCTCTC 58.787 55.000 0.00 0.00 0.00 3.20
3189 5408 0.528466 CGCACACACACACACTCTCT 60.528 55.000 0.00 0.00 0.00 3.10
3190 5409 1.927210 CGCACACACACACACTCTC 59.073 57.895 0.00 0.00 0.00 3.20
3191 5410 2.173669 GCGCACACACACACACTCT 61.174 57.895 0.30 0.00 0.00 3.24
3192 5411 2.324477 GCGCACACACACACACTC 59.676 61.111 0.30 0.00 0.00 3.51
3193 5412 3.563088 CGCGCACACACACACACT 61.563 61.111 8.75 0.00 0.00 3.55
3212 5431 4.943591 CACAGCACACGCACACGC 62.944 66.667 0.00 0.00 45.53 5.34
3214 5433 1.785041 AATCCACAGCACACGCACAC 61.785 55.000 0.00 0.00 42.27 3.82
3215 5434 1.525765 AATCCACAGCACACGCACA 60.526 52.632 0.00 0.00 42.27 4.57
3216 5435 1.081906 CAATCCACAGCACACGCAC 60.082 57.895 0.00 0.00 42.27 5.34
3217 5436 2.260154 CCAATCCACAGCACACGCA 61.260 57.895 0.00 0.00 42.27 5.24
3218 5437 1.308069 ATCCAATCCACAGCACACGC 61.308 55.000 0.00 0.00 38.99 5.34
3219 5438 0.448990 CATCCAATCCACAGCACACG 59.551 55.000 0.00 0.00 0.00 4.49
3220 5439 1.538047 ACATCCAATCCACAGCACAC 58.462 50.000 0.00 0.00 0.00 3.82
3221 5440 2.291209 AACATCCAATCCACAGCACA 57.709 45.000 0.00 0.00 0.00 4.57
3222 5441 4.989279 ATAAACATCCAATCCACAGCAC 57.011 40.909 0.00 0.00 0.00 4.40
3223 5442 5.504853 TGTATAAACATCCAATCCACAGCA 58.495 37.500 0.00 0.00 0.00 4.41
3224 5443 6.441274 CATGTATAAACATCCAATCCACAGC 58.559 40.000 0.00 0.00 44.70 4.40
3225 5444 6.515531 GCCATGTATAAACATCCAATCCACAG 60.516 42.308 0.00 0.00 44.70 3.66
3226 5445 5.301551 GCCATGTATAAACATCCAATCCACA 59.698 40.000 0.00 0.00 44.70 4.17
3227 5446 5.536161 AGCCATGTATAAACATCCAATCCAC 59.464 40.000 0.00 0.00 44.70 4.02
3228 5447 5.704354 AGCCATGTATAAACATCCAATCCA 58.296 37.500 0.00 0.00 44.70 3.41
3229 5448 5.106555 CGAGCCATGTATAAACATCCAATCC 60.107 44.000 0.00 0.00 44.70 3.01
3230 5449 5.617751 GCGAGCCATGTATAAACATCCAATC 60.618 44.000 0.00 0.00 44.70 2.67
3231 5450 4.216257 GCGAGCCATGTATAAACATCCAAT 59.784 41.667 0.00 0.00 44.70 3.16
3232 5451 3.563808 GCGAGCCATGTATAAACATCCAA 59.436 43.478 0.00 0.00 44.70 3.53
3233 5452 3.138304 GCGAGCCATGTATAAACATCCA 58.862 45.455 0.00 0.00 44.70 3.41
3234 5453 3.187227 CAGCGAGCCATGTATAAACATCC 59.813 47.826 0.00 0.00 44.70 3.51
3235 5454 3.809832 ACAGCGAGCCATGTATAAACATC 59.190 43.478 0.00 0.00 44.70 3.06
3237 5456 3.260475 ACAGCGAGCCATGTATAAACA 57.740 42.857 0.00 0.00 40.69 2.83
3238 5457 3.621268 TCAACAGCGAGCCATGTATAAAC 59.379 43.478 0.00 0.00 0.00 2.01
3239 5458 3.867857 TCAACAGCGAGCCATGTATAAA 58.132 40.909 0.00 0.00 0.00 1.40
3240 5459 3.535280 TCAACAGCGAGCCATGTATAA 57.465 42.857 0.00 0.00 0.00 0.98
3241 5460 3.181466 ACATCAACAGCGAGCCATGTATA 60.181 43.478 0.00 0.00 0.00 1.47
3242 5461 2.216046 CATCAACAGCGAGCCATGTAT 58.784 47.619 0.00 0.00 0.00 2.29
3243 5462 1.066215 ACATCAACAGCGAGCCATGTA 60.066 47.619 0.00 0.00 0.00 2.29
3244 5463 0.321919 ACATCAACAGCGAGCCATGT 60.322 50.000 0.00 0.00 0.00 3.21
3245 5464 0.098200 CACATCAACAGCGAGCCATG 59.902 55.000 0.00 0.00 0.00 3.66
3246 5465 0.321919 ACACATCAACAGCGAGCCAT 60.322 50.000 0.00 0.00 0.00 4.40
3247 5466 0.534877 AACACATCAACAGCGAGCCA 60.535 50.000 0.00 0.00 0.00 4.75
3248 5467 0.593128 AAACACATCAACAGCGAGCC 59.407 50.000 0.00 0.00 0.00 4.70
3249 5468 2.405892 AAAACACATCAACAGCGAGC 57.594 45.000 0.00 0.00 0.00 5.03
3250 5469 4.990543 TCTAAAACACATCAACAGCGAG 57.009 40.909 0.00 0.00 0.00 5.03
3251 5470 5.940192 AATCTAAAACACATCAACAGCGA 57.060 34.783 0.00 0.00 0.00 4.93
3252 5471 5.343058 CCAAATCTAAAACACATCAACAGCG 59.657 40.000 0.00 0.00 0.00 5.18
3253 5472 6.215845 ACCAAATCTAAAACACATCAACAGC 58.784 36.000 0.00 0.00 0.00 4.40
3254 5473 7.306749 GCAACCAAATCTAAAACACATCAACAG 60.307 37.037 0.00 0.00 0.00 3.16
3255 5474 6.478344 GCAACCAAATCTAAAACACATCAACA 59.522 34.615 0.00 0.00 0.00 3.33
3256 5475 6.478344 TGCAACCAAATCTAAAACACATCAAC 59.522 34.615 0.00 0.00 0.00 3.18
3257 5476 6.577103 TGCAACCAAATCTAAAACACATCAA 58.423 32.000 0.00 0.00 0.00 2.57
3258 5477 6.154203 TGCAACCAAATCTAAAACACATCA 57.846 33.333 0.00 0.00 0.00 3.07
3259 5478 7.656707 AATGCAACCAAATCTAAAACACATC 57.343 32.000 0.00 0.00 0.00 3.06
3260 5479 7.933033 AGAAATGCAACCAAATCTAAAACACAT 59.067 29.630 0.00 0.00 0.00 3.21
3261 5480 7.224362 CAGAAATGCAACCAAATCTAAAACACA 59.776 33.333 0.00 0.00 0.00 3.72
3262 5481 7.224557 ACAGAAATGCAACCAAATCTAAAACAC 59.775 33.333 0.00 0.00 0.00 3.32
3263 5482 7.271511 ACAGAAATGCAACCAAATCTAAAACA 58.728 30.769 0.00 0.00 0.00 2.83
3264 5483 7.713764 ACAGAAATGCAACCAAATCTAAAAC 57.286 32.000 0.00 0.00 0.00 2.43
3265 5484 8.855110 TCTACAGAAATGCAACCAAATCTAAAA 58.145 29.630 0.00 0.00 0.00 1.52
3266 5485 8.402798 TCTACAGAAATGCAACCAAATCTAAA 57.597 30.769 0.00 0.00 0.00 1.85
3267 5486 7.882791 TCTCTACAGAAATGCAACCAAATCTAA 59.117 33.333 0.00 0.00 0.00 2.10
3268 5487 7.394016 TCTCTACAGAAATGCAACCAAATCTA 58.606 34.615 0.00 0.00 0.00 1.98
3269 5488 6.240894 TCTCTACAGAAATGCAACCAAATCT 58.759 36.000 0.00 0.00 0.00 2.40
3270 5489 6.500684 TCTCTACAGAAATGCAACCAAATC 57.499 37.500 0.00 0.00 0.00 2.17
3271 5490 5.105997 GCTCTCTACAGAAATGCAACCAAAT 60.106 40.000 0.00 0.00 0.00 2.32
3272 5491 4.216257 GCTCTCTACAGAAATGCAACCAAA 59.784 41.667 0.00 0.00 0.00 3.28
3273 5492 3.753272 GCTCTCTACAGAAATGCAACCAA 59.247 43.478 0.00 0.00 0.00 3.67
3274 5493 3.338249 GCTCTCTACAGAAATGCAACCA 58.662 45.455 0.00 0.00 0.00 3.67
3275 5494 2.349886 CGCTCTCTACAGAAATGCAACC 59.650 50.000 0.00 0.00 0.00 3.77
3276 5495 2.222908 GCGCTCTCTACAGAAATGCAAC 60.223 50.000 0.00 0.00 0.00 4.17
3277 5496 2.002586 GCGCTCTCTACAGAAATGCAA 58.997 47.619 0.00 0.00 0.00 4.08
3278 5497 1.645034 GCGCTCTCTACAGAAATGCA 58.355 50.000 0.00 0.00 0.00 3.96
3279 5498 0.574454 CGCGCTCTCTACAGAAATGC 59.426 55.000 5.56 0.00 0.00 3.56
3280 5499 1.849219 GACGCGCTCTCTACAGAAATG 59.151 52.381 5.73 0.00 0.00 2.32
3281 5500 1.532090 CGACGCGCTCTCTACAGAAAT 60.532 52.381 5.73 0.00 0.00 2.17
3282 5501 0.179197 CGACGCGCTCTCTACAGAAA 60.179 55.000 5.73 0.00 0.00 2.52
3283 5502 1.296755 ACGACGCGCTCTCTACAGAA 61.297 55.000 5.73 0.00 0.00 3.02
3284 5503 1.296755 AACGACGCGCTCTCTACAGA 61.297 55.000 5.73 0.00 0.00 3.41
3285 5504 0.372679 TAACGACGCGCTCTCTACAG 59.627 55.000 5.73 0.00 0.00 2.74
3286 5505 1.012086 ATAACGACGCGCTCTCTACA 58.988 50.000 5.73 0.00 0.00 2.74
3287 5506 2.102474 AATAACGACGCGCTCTCTAC 57.898 50.000 5.73 0.00 0.00 2.59
3288 5507 2.838386 AAATAACGACGCGCTCTCTA 57.162 45.000 5.73 0.00 0.00 2.43
3289 5508 1.992170 AAAATAACGACGCGCTCTCT 58.008 45.000 5.73 0.00 0.00 3.10


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.