Multiple sequence alignment - TraesCS5D01G034100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G034100 chr5D 100.000 2819 0 0 1 2819 32931732 32934550 0.000000e+00 5206.0
1 TraesCS5D01G034100 chr5D 98.438 640 9 1 2181 2819 205182150 205182789 0.000000e+00 1125.0
2 TraesCS5D01G034100 chr5D 98.587 637 8 1 2184 2819 247500961 247501597 0.000000e+00 1125.0
3 TraesCS5D01G034100 chr5D 98.585 636 9 0 2184 2819 351340742 351340107 0.000000e+00 1125.0
4 TraesCS5D01G034100 chr5D 97.696 651 12 3 2171 2819 533516124 533516773 0.000000e+00 1116.0
5 TraesCS5D01G034100 chr5D 97.281 331 9 0 1 331 42869568 42869238 1.900000e-156 562.0
6 TraesCS5D01G034100 chr6A 94.476 1394 63 2 791 2183 107831592 107832972 0.000000e+00 2135.0
7 TraesCS5D01G034100 chr2A 95.863 1257 51 1 928 2183 755471200 755469944 0.000000e+00 2032.0
8 TraesCS5D01G034100 chr2A 81.531 1045 164 21 794 1827 561248258 561249284 0.000000e+00 833.0
9 TraesCS5D01G034100 chr2A 93.333 60 2 2 793 851 743120451 743120393 1.390000e-13 87.9
10 TraesCS5D01G034100 chr2A 100.000 40 0 0 794 833 755471265 755471226 1.080000e-09 75.0
11 TraesCS5D01G034100 chr3D 88.900 1036 96 8 797 1827 398281974 398282995 0.000000e+00 1258.0
12 TraesCS5D01G034100 chr3D 98.187 331 6 0 1 331 560455 560785 1.880000e-161 579.0
13 TraesCS5D01G034100 chr3D 98.187 331 6 0 1 331 576669 576999 1.880000e-161 579.0
14 TraesCS5D01G034100 chr3D 97.872 329 7 0 3 331 390413494 390413166 1.130000e-158 569.0
15 TraesCS5D01G034100 chr3D 96.460 339 11 1 1 338 119412352 119412690 2.450000e-155 558.0
16 TraesCS5D01G034100 chr3D 91.033 368 11 9 347 714 286800271 286800616 7.060000e-131 477.0
17 TraesCS5D01G034100 chrUn 98.440 641 9 1 2179 2819 27324651 27325290 0.000000e+00 1127.0
18 TraesCS5D01G034100 chrUn 98.585 636 9 0 2184 2819 27331473 27332108 0.000000e+00 1125.0
19 TraesCS5D01G034100 chr2D 98.137 644 12 0 2176 2819 135413775 135413132 0.000000e+00 1123.0
20 TraesCS5D01G034100 chr2D 82.517 1041 156 16 796 1827 575756561 575755538 0.000000e+00 891.0
21 TraesCS5D01G034100 chr2D 100.000 32 0 0 748 779 117198489 117198520 3.030000e-05 60.2
22 TraesCS5D01G034100 chr1D 97.994 648 12 1 2173 2819 340533614 340534261 0.000000e+00 1123.0
23 TraesCS5D01G034100 chr1D 81.538 1040 163 17 794 1827 31675794 31674778 0.000000e+00 830.0
24 TraesCS5D01G034100 chr1D 97.281 331 9 0 1 331 18201437 18201107 1.900000e-156 562.0
25 TraesCS5D01G034100 chr7D 98.270 636 11 0 2184 2819 110213369 110212734 0.000000e+00 1114.0
26 TraesCS5D01G034100 chr7D 97.885 331 7 0 1 331 124296433 124296103 8.760000e-160 573.0
27 TraesCS5D01G034100 chr7D 97.590 332 8 0 1 332 3076838 3076507 1.130000e-158 569.0
28 TraesCS5D01G034100 chr7D 97.289 332 9 0 1 332 568273023 568272692 5.270000e-157 564.0
29 TraesCS5D01G034100 chr7B 82.783 848 140 5 968 1813 692186583 692185740 0.000000e+00 752.0
30 TraesCS5D01G034100 chr7B 87.332 371 33 7 347 714 750033988 750033629 2.020000e-111 412.0
31 TraesCS5D01G034100 chr7B 85.479 365 26 10 347 709 472785557 472785896 3.450000e-94 355.0
32 TraesCS5D01G034100 chr7B 93.220 236 16 0 1896 2131 688124298 688124533 5.780000e-92 348.0
33 TraesCS5D01G034100 chr7B 88.265 196 14 5 528 714 6031166 6031361 2.830000e-55 226.0
34 TraesCS5D01G034100 chr7B 78.804 368 39 19 347 709 568770759 568770426 7.910000e-51 211.0
35 TraesCS5D01G034100 chr4D 95.109 368 18 0 347 714 394899065 394899432 5.230000e-162 580.0
36 TraesCS5D01G034100 chr4D 94.118 119 7 0 2065 2183 480850287 480850169 6.200000e-42 182.0
37 TraesCS5D01G034100 chr3B 79.972 714 138 5 1073 1784 403439012 403438302 3.220000e-144 521.0
38 TraesCS5D01G034100 chr3B 83.333 372 45 6 347 709 565711072 565711435 7.530000e-86 327.0
39 TraesCS5D01G034100 chr3B 91.667 60 2 3 794 851 403452800 403452742 2.330000e-11 80.5
40 TraesCS5D01G034100 chr1A 96.141 311 9 3 349 657 10964553 10964244 3.240000e-139 505.0
41 TraesCS5D01G034100 chr1A 90.625 64 2 4 791 851 497353717 497353779 6.470000e-12 82.4
42 TraesCS5D01G034100 chr4B 87.533 377 29 10 347 714 508848011 508847644 1.210000e-113 420.0
43 TraesCS5D01G034100 chr2B 88.066 243 19 7 347 589 797425299 797425531 2.140000e-71 279.0
44 TraesCS5D01G034100 chr2B 92.248 129 9 1 587 714 797425479 797425607 6.200000e-42 182.0
45 TraesCS5D01G034100 chr2B 83.065 124 11 6 595 709 58201585 58201707 1.380000e-18 104.0
46 TraesCS5D01G034100 chr5A 90.099 202 11 5 484 682 591122936 591122741 1.300000e-63 254.0
47 TraesCS5D01G034100 chr5A 95.270 148 6 1 347 494 591124120 591123974 1.690000e-57 233.0
48 TraesCS5D01G034100 chr1B 92.063 63 2 3 794 854 318993459 318993398 5.000000e-13 86.1
49 TraesCS5D01G034100 chr7A 89.231 65 4 3 793 855 170593292 170593229 8.370000e-11 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G034100 chr5D 32931732 32934550 2818 False 5206.0 5206 100.0000 1 2819 1 chr5D.!!$F1 2818
1 TraesCS5D01G034100 chr5D 205182150 205182789 639 False 1125.0 1125 98.4380 2181 2819 1 chr5D.!!$F2 638
2 TraesCS5D01G034100 chr5D 247500961 247501597 636 False 1125.0 1125 98.5870 2184 2819 1 chr5D.!!$F3 635
3 TraesCS5D01G034100 chr5D 351340107 351340742 635 True 1125.0 1125 98.5850 2184 2819 1 chr5D.!!$R2 635
4 TraesCS5D01G034100 chr5D 533516124 533516773 649 False 1116.0 1116 97.6960 2171 2819 1 chr5D.!!$F4 648
5 TraesCS5D01G034100 chr6A 107831592 107832972 1380 False 2135.0 2135 94.4760 791 2183 1 chr6A.!!$F1 1392
6 TraesCS5D01G034100 chr2A 755469944 755471265 1321 True 1053.5 2032 97.9315 794 2183 2 chr2A.!!$R2 1389
7 TraesCS5D01G034100 chr2A 561248258 561249284 1026 False 833.0 833 81.5310 794 1827 1 chr2A.!!$F1 1033
8 TraesCS5D01G034100 chr3D 398281974 398282995 1021 False 1258.0 1258 88.9000 797 1827 1 chr3D.!!$F5 1030
9 TraesCS5D01G034100 chrUn 27324651 27325290 639 False 1127.0 1127 98.4400 2179 2819 1 chrUn.!!$F1 640
10 TraesCS5D01G034100 chrUn 27331473 27332108 635 False 1125.0 1125 98.5850 2184 2819 1 chrUn.!!$F2 635
11 TraesCS5D01G034100 chr2D 135413132 135413775 643 True 1123.0 1123 98.1370 2176 2819 1 chr2D.!!$R1 643
12 TraesCS5D01G034100 chr2D 575755538 575756561 1023 True 891.0 891 82.5170 796 1827 1 chr2D.!!$R2 1031
13 TraesCS5D01G034100 chr1D 340533614 340534261 647 False 1123.0 1123 97.9940 2173 2819 1 chr1D.!!$F1 646
14 TraesCS5D01G034100 chr1D 31674778 31675794 1016 True 830.0 830 81.5380 794 1827 1 chr1D.!!$R2 1033
15 TraesCS5D01G034100 chr7D 110212734 110213369 635 True 1114.0 1114 98.2700 2184 2819 1 chr7D.!!$R2 635
16 TraesCS5D01G034100 chr7B 692185740 692186583 843 True 752.0 752 82.7830 968 1813 1 chr7B.!!$R2 845
17 TraesCS5D01G034100 chr3B 403438302 403439012 710 True 521.0 521 79.9720 1073 1784 1 chr3B.!!$R1 711
18 TraesCS5D01G034100 chr5A 591122741 591124120 1379 True 243.5 254 92.6845 347 682 2 chr5A.!!$R1 335

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
289 290 0.025384 GCACGGAAATACGCGGTAAC 59.975 55.0 12.47 0.00 37.37 2.50 F
299 300 0.034863 ACGCGGTAACCATGGGAAAT 60.035 50.0 18.09 1.59 0.00 2.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1331 2394 0.180642 CATGATCACAGCCTGCTCCT 59.819 55.0 0.00 0.0 0.00 3.69 R
1917 2985 0.760567 CCTGAGATCCATCACCCGGA 60.761 60.0 0.73 0.0 36.84 5.14 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
41 42 4.326504 GGGAAATACCGAGAAATACCGA 57.673 45.455 0.00 0.00 40.11 4.69
42 43 4.304939 GGGAAATACCGAGAAATACCGAG 58.695 47.826 0.00 0.00 40.11 4.63
43 44 4.038402 GGGAAATACCGAGAAATACCGAGA 59.962 45.833 0.00 0.00 40.11 4.04
44 45 5.452356 GGGAAATACCGAGAAATACCGAGAA 60.452 44.000 0.00 0.00 40.11 2.87
45 46 6.221659 GGAAATACCGAGAAATACCGAGAAT 58.778 40.000 0.00 0.00 0.00 2.40
46 47 7.373493 GGAAATACCGAGAAATACCGAGAATA 58.627 38.462 0.00 0.00 0.00 1.75
47 48 8.033626 GGAAATACCGAGAAATACCGAGAATAT 58.966 37.037 0.00 0.00 0.00 1.28
48 49 9.420551 GAAATACCGAGAAATACCGAGAATATT 57.579 33.333 0.00 0.00 0.00 1.28
49 50 9.774413 AAATACCGAGAAATACCGAGAATATTT 57.226 29.630 0.00 0.00 35.43 1.40
50 51 8.983307 ATACCGAGAAATACCGAGAATATTTC 57.017 34.615 8.71 8.71 44.27 2.17
51 52 5.919141 ACCGAGAAATACCGAGAATATTTCG 59.081 40.000 10.33 10.96 46.64 3.46
52 53 6.147581 CCGAGAAATACCGAGAATATTTCGA 58.852 40.000 16.51 0.00 46.64 3.71
53 54 6.639686 CCGAGAAATACCGAGAATATTTCGAA 59.360 38.462 16.51 0.00 46.64 3.71
54 55 7.358187 CCGAGAAATACCGAGAATATTTCGAAC 60.358 40.741 16.51 0.00 46.64 3.95
55 56 7.390918 AGAAATACCGAGAATATTTCGAACG 57.609 36.000 16.51 0.00 46.64 3.95
56 57 7.198390 AGAAATACCGAGAATATTTCGAACGA 58.802 34.615 16.51 0.00 46.64 3.85
57 58 7.703621 AGAAATACCGAGAATATTTCGAACGAA 59.296 33.333 16.51 5.53 46.64 3.85
58 59 7.941795 AATACCGAGAATATTTCGAACGAAT 57.058 32.000 16.51 0.00 40.36 3.34
59 60 7.941795 ATACCGAGAATATTTCGAACGAATT 57.058 32.000 16.51 9.48 40.36 2.17
60 61 6.657836 ACCGAGAATATTTCGAACGAATTT 57.342 33.333 16.51 5.50 40.36 1.82
61 62 7.068692 ACCGAGAATATTTCGAACGAATTTT 57.931 32.000 16.51 5.19 40.36 1.82
62 63 6.959311 ACCGAGAATATTTCGAACGAATTTTG 59.041 34.615 16.51 0.00 40.36 2.44
63 64 6.959311 CCGAGAATATTTCGAACGAATTTTGT 59.041 34.615 16.51 4.09 40.36 2.83
64 65 8.111836 CCGAGAATATTTCGAACGAATTTTGTA 58.888 33.333 16.51 0.00 40.36 2.41
65 66 9.133218 CGAGAATATTTCGAACGAATTTTGTAG 57.867 33.333 10.33 1.81 40.36 2.74
66 67 9.968743 GAGAATATTTCGAACGAATTTTGTAGT 57.031 29.630 10.33 0.27 33.79 2.73
72 73 8.844441 TTTCGAACGAATTTTGTAGTTGAATT 57.156 26.923 10.33 0.00 33.79 2.17
73 74 8.844441 TTCGAACGAATTTTGTAGTTGAATTT 57.156 26.923 5.53 0.00 0.00 1.82
74 75 8.844441 TCGAACGAATTTTGTAGTTGAATTTT 57.156 26.923 0.00 0.00 0.00 1.82
75 76 8.738554 TCGAACGAATTTTGTAGTTGAATTTTG 58.261 29.630 0.00 0.00 0.00 2.44
76 77 8.738554 CGAACGAATTTTGTAGTTGAATTTTGA 58.261 29.630 0.00 0.00 0.00 2.69
116 117 6.769608 GAATGAACATTCAAACCAAAGACC 57.230 37.500 18.73 0.00 44.89 3.85
117 118 4.664150 TGAACATTCAAACCAAAGACCC 57.336 40.909 0.00 0.00 33.55 4.46
118 119 3.067461 TGAACATTCAAACCAAAGACCCG 59.933 43.478 0.00 0.00 33.55 5.28
119 120 2.661718 ACATTCAAACCAAAGACCCGT 58.338 42.857 0.00 0.00 0.00 5.28
120 121 2.621526 ACATTCAAACCAAAGACCCGTC 59.378 45.455 0.00 0.00 0.00 4.79
121 122 2.421751 TTCAAACCAAAGACCCGTCA 57.578 45.000 0.00 0.00 0.00 4.35
122 123 2.421751 TCAAACCAAAGACCCGTCAA 57.578 45.000 0.00 0.00 0.00 3.18
123 124 2.724454 TCAAACCAAAGACCCGTCAAA 58.276 42.857 0.00 0.00 0.00 2.69
124 125 3.090037 TCAAACCAAAGACCCGTCAAAA 58.910 40.909 0.00 0.00 0.00 2.44
125 126 3.119424 TCAAACCAAAGACCCGTCAAAAC 60.119 43.478 0.00 0.00 0.00 2.43
126 127 2.131776 ACCAAAGACCCGTCAAAACA 57.868 45.000 0.00 0.00 0.00 2.83
127 128 2.021457 ACCAAAGACCCGTCAAAACAG 58.979 47.619 0.00 0.00 0.00 3.16
128 129 1.336755 CCAAAGACCCGTCAAAACAGG 59.663 52.381 0.00 0.00 0.00 4.00
129 130 2.294074 CAAAGACCCGTCAAAACAGGA 58.706 47.619 0.00 0.00 0.00 3.86
130 131 2.685897 CAAAGACCCGTCAAAACAGGAA 59.314 45.455 0.00 0.00 0.00 3.36
131 132 1.963172 AGACCCGTCAAAACAGGAAC 58.037 50.000 0.00 0.00 0.00 3.62
132 133 1.489230 AGACCCGTCAAAACAGGAACT 59.511 47.619 0.00 0.00 43.88 3.01
133 134 2.701951 AGACCCGTCAAAACAGGAACTA 59.298 45.455 0.00 0.00 36.02 2.24
134 135 3.064931 GACCCGTCAAAACAGGAACTAG 58.935 50.000 0.00 0.00 36.02 2.57
135 136 2.224450 ACCCGTCAAAACAGGAACTAGG 60.224 50.000 0.00 0.00 36.02 3.02
136 137 2.224450 CCCGTCAAAACAGGAACTAGGT 60.224 50.000 0.00 0.00 36.02 3.08
137 138 3.473625 CCGTCAAAACAGGAACTAGGTT 58.526 45.455 0.00 0.00 36.02 3.50
138 139 3.250040 CCGTCAAAACAGGAACTAGGTTG 59.750 47.826 0.00 0.00 36.02 3.77
139 140 3.303791 CGTCAAAACAGGAACTAGGTTGC 60.304 47.826 0.00 0.00 36.02 4.17
140 141 3.883489 GTCAAAACAGGAACTAGGTTGCT 59.117 43.478 0.00 0.00 44.62 3.91
141 142 5.061179 GTCAAAACAGGAACTAGGTTGCTA 58.939 41.667 4.28 0.00 42.02 3.49
142 143 5.049612 GTCAAAACAGGAACTAGGTTGCTAC 60.050 44.000 4.28 0.00 42.02 3.58
143 144 3.314541 AACAGGAACTAGGTTGCTACG 57.685 47.619 4.28 0.00 42.02 3.51
144 145 2.522185 ACAGGAACTAGGTTGCTACGA 58.478 47.619 4.28 0.00 42.02 3.43
145 146 2.895404 ACAGGAACTAGGTTGCTACGAA 59.105 45.455 4.28 0.00 42.02 3.85
146 147 3.251571 CAGGAACTAGGTTGCTACGAAC 58.748 50.000 4.28 0.00 42.02 3.95
147 148 2.895404 AGGAACTAGGTTGCTACGAACA 59.105 45.455 2.76 0.00 42.11 3.18
148 149 2.991866 GGAACTAGGTTGCTACGAACAC 59.008 50.000 0.00 0.00 31.28 3.32
149 150 2.342910 ACTAGGTTGCTACGAACACG 57.657 50.000 0.00 0.00 0.00 4.49
150 151 1.610522 ACTAGGTTGCTACGAACACGT 59.389 47.619 0.00 0.00 42.87 4.49
151 152 2.248487 CTAGGTTGCTACGAACACGTC 58.752 52.381 0.00 0.00 40.72 4.34
152 153 0.386476 AGGTTGCTACGAACACGTCA 59.614 50.000 0.00 0.00 40.72 4.35
153 154 0.782384 GGTTGCTACGAACACGTCAG 59.218 55.000 0.00 0.00 40.72 3.51
154 155 1.601162 GGTTGCTACGAACACGTCAGA 60.601 52.381 0.00 0.00 40.72 3.27
155 156 2.121786 GTTGCTACGAACACGTCAGAA 58.878 47.619 0.00 0.00 40.72 3.02
156 157 2.717580 TGCTACGAACACGTCAGAAT 57.282 45.000 0.00 0.00 40.72 2.40
157 158 2.592194 TGCTACGAACACGTCAGAATC 58.408 47.619 0.00 0.00 40.72 2.52
158 159 2.030628 TGCTACGAACACGTCAGAATCA 60.031 45.455 0.00 0.00 40.72 2.57
159 160 2.984471 GCTACGAACACGTCAGAATCAA 59.016 45.455 0.00 0.00 40.72 2.57
160 161 3.181543 GCTACGAACACGTCAGAATCAAC 60.182 47.826 0.00 0.00 40.72 3.18
161 162 3.093717 ACGAACACGTCAGAATCAACT 57.906 42.857 0.00 0.00 35.22 3.16
162 163 3.050619 ACGAACACGTCAGAATCAACTC 58.949 45.455 0.00 0.00 35.22 3.01
163 164 3.243434 ACGAACACGTCAGAATCAACTCT 60.243 43.478 0.00 0.00 35.22 3.24
164 165 3.362237 CGAACACGTCAGAATCAACTCTC 59.638 47.826 0.00 0.00 0.00 3.20
165 166 3.305398 ACACGTCAGAATCAACTCTCC 57.695 47.619 0.00 0.00 0.00 3.71
166 167 2.894126 ACACGTCAGAATCAACTCTCCT 59.106 45.455 0.00 0.00 0.00 3.69
167 168 3.322254 ACACGTCAGAATCAACTCTCCTT 59.678 43.478 0.00 0.00 0.00 3.36
168 169 3.677121 CACGTCAGAATCAACTCTCCTTG 59.323 47.826 0.00 0.00 0.00 3.61
169 170 2.670414 CGTCAGAATCAACTCTCCTTGC 59.330 50.000 0.00 0.00 0.00 4.01
170 171 3.668447 GTCAGAATCAACTCTCCTTGCA 58.332 45.455 0.00 0.00 0.00 4.08
171 172 4.260170 GTCAGAATCAACTCTCCTTGCAT 58.740 43.478 0.00 0.00 0.00 3.96
172 173 4.699257 GTCAGAATCAACTCTCCTTGCATT 59.301 41.667 0.00 0.00 0.00 3.56
173 174 5.877012 GTCAGAATCAACTCTCCTTGCATTA 59.123 40.000 0.00 0.00 0.00 1.90
174 175 6.372659 GTCAGAATCAACTCTCCTTGCATTAA 59.627 38.462 0.00 0.00 0.00 1.40
175 176 7.066766 GTCAGAATCAACTCTCCTTGCATTAAT 59.933 37.037 0.00 0.00 0.00 1.40
176 177 7.613022 TCAGAATCAACTCTCCTTGCATTAATT 59.387 33.333 0.00 0.00 0.00 1.40
177 178 8.896744 CAGAATCAACTCTCCTTGCATTAATTA 58.103 33.333 0.00 0.00 0.00 1.40
178 179 9.118300 AGAATCAACTCTCCTTGCATTAATTAG 57.882 33.333 0.00 0.00 0.00 1.73
179 180 9.113838 GAATCAACTCTCCTTGCATTAATTAGA 57.886 33.333 0.00 0.00 0.00 2.10
180 181 9.638176 AATCAACTCTCCTTGCATTAATTAGAT 57.362 29.630 0.00 0.00 0.00 1.98
181 182 8.668510 TCAACTCTCCTTGCATTAATTAGATC 57.331 34.615 0.00 0.00 0.00 2.75
182 183 7.716998 TCAACTCTCCTTGCATTAATTAGATCC 59.283 37.037 0.00 0.00 0.00 3.36
183 184 7.385894 ACTCTCCTTGCATTAATTAGATCCT 57.614 36.000 0.00 0.00 0.00 3.24
184 185 8.497910 ACTCTCCTTGCATTAATTAGATCCTA 57.502 34.615 0.00 0.00 0.00 2.94
185 186 8.592809 ACTCTCCTTGCATTAATTAGATCCTAG 58.407 37.037 0.00 0.00 0.00 3.02
186 187 7.911651 TCTCCTTGCATTAATTAGATCCTAGG 58.088 38.462 0.82 0.82 0.00 3.02
187 188 6.476378 TCCTTGCATTAATTAGATCCTAGGC 58.524 40.000 2.96 0.00 0.00 3.93
188 189 6.044287 TCCTTGCATTAATTAGATCCTAGGCA 59.956 38.462 2.96 0.00 0.00 4.75
189 190 6.150140 CCTTGCATTAATTAGATCCTAGGCAC 59.850 42.308 2.96 0.00 0.00 5.01
190 191 6.439636 TGCATTAATTAGATCCTAGGCACT 57.560 37.500 2.96 8.28 46.37 4.40
191 192 6.841601 TGCATTAATTAGATCCTAGGCACTT 58.158 36.000 2.96 0.00 41.75 3.16
192 193 7.290061 TGCATTAATTAGATCCTAGGCACTTT 58.710 34.615 2.96 1.19 41.75 2.66
193 194 8.436778 TGCATTAATTAGATCCTAGGCACTTTA 58.563 33.333 2.96 0.29 41.75 1.85
194 195 8.722394 GCATTAATTAGATCCTAGGCACTTTAC 58.278 37.037 2.96 0.00 41.75 2.01
198 199 8.548880 AATTAGATCCTAGGCACTTTACTACA 57.451 34.615 2.96 0.00 41.75 2.74
199 200 7.966339 TTAGATCCTAGGCACTTTACTACAA 57.034 36.000 2.96 0.00 41.75 2.41
200 201 6.869206 AGATCCTAGGCACTTTACTACAAA 57.131 37.500 2.96 0.00 41.75 2.83
201 202 7.439108 AGATCCTAGGCACTTTACTACAAAT 57.561 36.000 2.96 0.00 41.75 2.32
202 203 7.501844 AGATCCTAGGCACTTTACTACAAATC 58.498 38.462 2.96 0.00 41.75 2.17
203 204 5.657474 TCCTAGGCACTTTACTACAAATCG 58.343 41.667 2.96 0.00 41.75 3.34
204 205 5.419788 TCCTAGGCACTTTACTACAAATCGA 59.580 40.000 2.96 0.00 41.75 3.59
205 206 5.749109 CCTAGGCACTTTACTACAAATCGAG 59.251 44.000 0.00 0.00 41.75 4.04
206 207 3.933332 AGGCACTTTACTACAAATCGAGC 59.067 43.478 0.00 0.00 27.25 5.03
207 208 3.241995 GGCACTTTACTACAAATCGAGCG 60.242 47.826 0.00 0.00 0.00 5.03
208 209 3.367025 GCACTTTACTACAAATCGAGCGT 59.633 43.478 0.00 0.00 0.00 5.07
209 210 4.143179 GCACTTTACTACAAATCGAGCGTT 60.143 41.667 0.00 0.00 0.00 4.84
210 211 5.061311 GCACTTTACTACAAATCGAGCGTTA 59.939 40.000 0.00 0.00 0.00 3.18
211 212 6.400303 GCACTTTACTACAAATCGAGCGTTAA 60.400 38.462 0.00 0.00 0.00 2.01
212 213 7.503991 CACTTTACTACAAATCGAGCGTTAAA 58.496 34.615 0.00 0.00 0.00 1.52
213 214 8.005466 CACTTTACTACAAATCGAGCGTTAAAA 58.995 33.333 0.00 0.00 0.00 1.52
214 215 8.715088 ACTTTACTACAAATCGAGCGTTAAAAT 58.285 29.630 0.00 0.00 0.00 1.82
215 216 9.537848 CTTTACTACAAATCGAGCGTTAAAATT 57.462 29.630 0.00 0.00 0.00 1.82
216 217 9.532697 TTTACTACAAATCGAGCGTTAAAATTC 57.467 29.630 0.00 0.00 0.00 2.17
217 218 7.124347 ACTACAAATCGAGCGTTAAAATTCA 57.876 32.000 0.00 0.00 0.00 2.57
218 219 7.577979 ACTACAAATCGAGCGTTAAAATTCAA 58.422 30.769 0.00 0.00 0.00 2.69
219 220 8.071368 ACTACAAATCGAGCGTTAAAATTCAAA 58.929 29.630 0.00 0.00 0.00 2.69
220 221 7.687005 ACAAATCGAGCGTTAAAATTCAAAA 57.313 28.000 0.00 0.00 0.00 2.44
221 222 8.293114 ACAAATCGAGCGTTAAAATTCAAAAT 57.707 26.923 0.00 0.00 0.00 1.82
222 223 8.760569 ACAAATCGAGCGTTAAAATTCAAAATT 58.239 25.926 0.00 0.00 0.00 1.82
223 224 9.579610 CAAATCGAGCGTTAAAATTCAAAATTT 57.420 25.926 0.00 0.00 0.00 1.82
225 226 9.791838 AATCGAGCGTTAAAATTCAAAATTTTC 57.208 25.926 12.31 1.63 33.73 2.29
226 227 8.341477 TCGAGCGTTAAAATTCAAAATTTTCA 57.659 26.923 12.31 1.71 33.73 2.69
227 228 8.808529 TCGAGCGTTAAAATTCAAAATTTTCAA 58.191 25.926 12.31 0.00 33.73 2.69
228 229 9.414834 CGAGCGTTAAAATTCAAAATTTTCAAA 57.585 25.926 12.31 0.00 33.73 2.69
264 265 6.746745 TTTTACTCGGAATGTGGATTTACC 57.253 37.500 0.00 0.00 39.54 2.85
265 266 2.901249 ACTCGGAATGTGGATTTACCG 58.099 47.619 0.00 0.00 42.61 4.02
266 267 2.498481 ACTCGGAATGTGGATTTACCGA 59.502 45.455 0.00 0.00 45.36 4.69
267 268 3.173668 TCGGAATGTGGATTTACCGAG 57.826 47.619 0.00 0.00 43.30 4.63
268 269 2.159014 TCGGAATGTGGATTTACCGAGG 60.159 50.000 0.00 0.00 43.30 4.63
269 270 2.572290 GGAATGTGGATTTACCGAGGG 58.428 52.381 0.00 0.00 42.61 4.30
270 271 2.572290 GAATGTGGATTTACCGAGGGG 58.428 52.381 0.00 0.00 42.61 4.79
271 272 0.182775 ATGTGGATTTACCGAGGGGC 59.817 55.000 0.00 0.00 42.61 5.80
272 273 1.202099 TGTGGATTTACCGAGGGGCA 61.202 55.000 0.00 0.00 42.61 5.36
273 274 0.746923 GTGGATTTACCGAGGGGCAC 60.747 60.000 0.00 0.00 42.61 5.01
274 275 1.523032 GGATTTACCGAGGGGCACG 60.523 63.158 0.00 0.00 36.48 5.34
281 282 4.120085 CGAGGGGCACGGAAATAC 57.880 61.111 0.00 0.00 0.00 1.89
282 283 1.881252 CGAGGGGCACGGAAATACG 60.881 63.158 0.00 0.00 40.31 3.06
283 284 2.124860 AGGGGCACGGAAATACGC 60.125 61.111 0.00 0.00 37.37 4.42
284 285 3.569690 GGGGCACGGAAATACGCG 61.570 66.667 3.53 3.53 37.37 6.01
285 286 3.569690 GGGCACGGAAATACGCGG 61.570 66.667 12.47 0.00 37.37 6.46
286 287 2.816520 GGCACGGAAATACGCGGT 60.817 61.111 12.47 0.00 37.37 5.68
287 288 1.519013 GGCACGGAAATACGCGGTA 60.519 57.895 12.47 0.25 37.37 4.02
288 289 1.083242 GGCACGGAAATACGCGGTAA 61.083 55.000 12.47 0.00 37.37 2.85
289 290 0.025384 GCACGGAAATACGCGGTAAC 59.975 55.000 12.47 0.00 37.37 2.50
290 291 0.646895 CACGGAAATACGCGGTAACC 59.353 55.000 12.47 6.30 37.37 2.85
291 292 0.246086 ACGGAAATACGCGGTAACCA 59.754 50.000 12.47 0.00 37.37 3.67
292 293 1.134729 ACGGAAATACGCGGTAACCAT 60.135 47.619 12.47 0.00 37.37 3.55
293 294 1.259507 CGGAAATACGCGGTAACCATG 59.740 52.381 12.47 0.00 0.00 3.66
294 295 1.600485 GGAAATACGCGGTAACCATGG 59.400 52.381 11.19 11.19 0.00 3.66
295 296 1.600485 GAAATACGCGGTAACCATGGG 59.400 52.381 18.09 0.00 0.00 4.00
296 297 0.831966 AATACGCGGTAACCATGGGA 59.168 50.000 18.09 0.00 0.00 4.37
297 298 0.831966 ATACGCGGTAACCATGGGAA 59.168 50.000 18.09 0.00 0.00 3.97
298 299 0.612229 TACGCGGTAACCATGGGAAA 59.388 50.000 18.09 0.00 0.00 3.13
299 300 0.034863 ACGCGGTAACCATGGGAAAT 60.035 50.000 18.09 1.59 0.00 2.17
300 301 0.661020 CGCGGTAACCATGGGAAATC 59.339 55.000 18.09 0.00 0.00 2.17
301 302 1.745827 CGCGGTAACCATGGGAAATCT 60.746 52.381 18.09 0.00 0.00 2.40
302 303 2.375146 GCGGTAACCATGGGAAATCTT 58.625 47.619 18.09 2.18 0.00 2.40
303 304 2.099098 GCGGTAACCATGGGAAATCTTG 59.901 50.000 18.09 0.00 0.00 3.02
304 305 3.616219 CGGTAACCATGGGAAATCTTGA 58.384 45.455 18.09 0.00 0.00 3.02
305 306 4.013728 CGGTAACCATGGGAAATCTTGAA 58.986 43.478 18.09 0.00 0.00 2.69
306 307 4.461081 CGGTAACCATGGGAAATCTTGAAA 59.539 41.667 18.09 0.00 0.00 2.69
307 308 5.127031 CGGTAACCATGGGAAATCTTGAAAT 59.873 40.000 18.09 0.00 0.00 2.17
308 309 6.350949 CGGTAACCATGGGAAATCTTGAAATT 60.351 38.462 18.09 0.00 0.00 1.82
309 310 7.394016 GGTAACCATGGGAAATCTTGAAATTT 58.606 34.615 18.09 0.00 0.00 1.82
310 311 7.549134 GGTAACCATGGGAAATCTTGAAATTTC 59.451 37.037 18.09 11.41 42.41 2.17
311 312 5.723295 ACCATGGGAAATCTTGAAATTTCG 58.277 37.500 18.09 0.46 43.52 3.46
312 313 5.480073 ACCATGGGAAATCTTGAAATTTCGA 59.520 36.000 18.09 10.62 43.52 3.71
313 314 5.807011 CCATGGGAAATCTTGAAATTTCGAC 59.193 40.000 13.34 0.00 43.52 4.20
314 315 6.350445 CCATGGGAAATCTTGAAATTTCGACT 60.350 38.462 13.34 0.00 43.52 4.18
315 316 6.012658 TGGGAAATCTTGAAATTTCGACTG 57.987 37.500 13.34 1.46 43.52 3.51
316 317 5.048083 TGGGAAATCTTGAAATTTCGACTGG 60.048 40.000 13.34 0.77 43.52 4.00
317 318 5.048013 GGGAAATCTTGAAATTTCGACTGGT 60.048 40.000 13.34 0.00 43.52 4.00
318 319 6.150474 GGGAAATCTTGAAATTTCGACTGGTA 59.850 38.462 13.34 0.00 43.52 3.25
319 320 7.308951 GGGAAATCTTGAAATTTCGACTGGTAA 60.309 37.037 13.34 0.00 43.52 2.85
320 321 7.537649 GGAAATCTTGAAATTTCGACTGGTAAC 59.462 37.037 13.34 1.06 43.52 2.50
321 322 5.934935 TCTTGAAATTTCGACTGGTAACC 57.065 39.130 13.34 0.00 0.00 2.85
322 323 5.369833 TCTTGAAATTTCGACTGGTAACCA 58.630 37.500 13.34 0.00 0.00 3.67
323 324 5.823570 TCTTGAAATTTCGACTGGTAACCAA 59.176 36.000 13.34 0.00 30.80 3.67
324 325 6.319152 TCTTGAAATTTCGACTGGTAACCAAA 59.681 34.615 13.34 0.00 30.80 3.28
325 326 6.452494 TGAAATTTCGACTGGTAACCAAAA 57.548 33.333 13.34 0.00 30.80 2.44
326 327 6.267070 TGAAATTTCGACTGGTAACCAAAAC 58.733 36.000 13.34 0.00 30.80 2.43
327 328 4.841443 ATTTCGACTGGTAACCAAAACC 57.159 40.909 0.00 0.00 37.53 3.27
328 329 3.564053 TTCGACTGGTAACCAAAACCT 57.436 42.857 0.00 0.00 37.91 3.50
329 330 3.564053 TCGACTGGTAACCAAAACCTT 57.436 42.857 0.00 0.00 37.91 3.50
330 331 3.207778 TCGACTGGTAACCAAAACCTTG 58.792 45.455 0.00 0.00 37.91 3.61
338 339 2.743060 CAAAACCTTGGGCCTGGC 59.257 61.111 11.05 11.05 0.00 4.85
339 340 2.139484 CAAAACCTTGGGCCTGGCA 61.139 57.895 22.05 0.00 0.00 4.92
340 341 2.140138 AAAACCTTGGGCCTGGCAC 61.140 57.895 22.05 19.06 0.00 5.01
341 342 2.603933 AAAACCTTGGGCCTGGCACT 62.604 55.000 23.45 0.00 30.56 4.40
342 343 3.815407 AACCTTGGGCCTGGCACTG 62.815 63.158 23.45 14.47 30.56 3.66
343 344 4.290622 CCTTGGGCCTGGCACTGT 62.291 66.667 23.45 0.00 30.56 3.55
344 345 2.203538 CTTGGGCCTGGCACTGTT 60.204 61.111 23.45 0.00 30.56 3.16
345 346 2.521465 TTGGGCCTGGCACTGTTG 60.521 61.111 23.45 0.00 30.56 3.33
361 362 3.134458 CTGTTGTCAAAGGAGACTCACC 58.866 50.000 4.53 0.00 42.68 4.02
385 386 3.997021 CAGGATTATTCTACCATCGGCAC 59.003 47.826 0.00 0.00 0.00 5.01
429 430 0.804989 CCATCGTCAAACTTCCAGGC 59.195 55.000 0.00 0.00 0.00 4.85
480 481 2.078392 GCCGAAACAAACGATAGGGAA 58.922 47.619 0.00 0.00 43.77 3.97
500 1549 4.271816 CCCTCGATCGTGGCCTCG 62.272 72.222 26.86 20.92 36.25 4.63
510 1559 0.803768 CGTGGCCTCGTCAGATTCTG 60.804 60.000 18.86 7.38 0.00 3.02
517 1566 3.068873 GCCTCGTCAGATTCTGGAACTAT 59.931 47.826 13.59 0.00 31.51 2.12
572 1621 0.036164 ACAAGCACGTATGGGCTTCA 59.964 50.000 21.67 0.00 46.82 3.02
585 1634 2.087646 GGGCTTCAACTAGGAAAGCTG 58.912 52.381 19.16 0.00 0.00 4.24
624 1673 4.704540 CCAACAAGTACATATGGGCTTCAA 59.295 41.667 7.80 0.00 0.00 2.69
625 1674 5.393027 CCAACAAGTACATATGGGCTTCAAC 60.393 44.000 7.80 0.00 0.00 3.18
627 1676 6.308015 ACAAGTACATATGGGCTTCAACTA 57.692 37.500 7.80 0.00 0.00 2.24
628 1677 6.349300 ACAAGTACATATGGGCTTCAACTAG 58.651 40.000 7.80 0.00 0.00 2.57
629 1678 5.552870 AGTACATATGGGCTTCAACTAGG 57.447 43.478 7.80 0.00 0.00 3.02
630 1679 5.216622 AGTACATATGGGCTTCAACTAGGA 58.783 41.667 7.80 0.00 0.00 2.94
631 1680 5.665812 AGTACATATGGGCTTCAACTAGGAA 59.334 40.000 7.80 0.00 0.00 3.36
633 1682 5.440610 ACATATGGGCTTCAACTAGGAAAG 58.559 41.667 7.80 0.00 0.00 2.62
634 1683 2.200373 TGGGCTTCAACTAGGAAAGC 57.800 50.000 14.28 14.28 0.00 3.51
635 1684 1.705186 TGGGCTTCAACTAGGAAAGCT 59.295 47.619 19.16 0.00 0.00 3.74
636 1685 2.290323 TGGGCTTCAACTAGGAAAGCTC 60.290 50.000 19.16 17.28 0.00 4.09
637 1686 2.360844 GGCTTCAACTAGGAAAGCTCC 58.639 52.381 19.16 6.36 42.81 4.70
662 1711 3.869246 GGCTTTAATACTTGAGCGCACTA 59.131 43.478 11.47 0.00 36.02 2.74
667 1716 7.169308 GCTTTAATACTTGAGCGCACTATTAGA 59.831 37.037 11.47 3.19 0.00 2.10
695 1747 6.540323 GCTAATTAGCGCTAAAGTTGTTTG 57.460 37.500 31.78 21.32 39.82 2.93
696 1748 6.311723 GCTAATTAGCGCTAAAGTTGTTTGA 58.688 36.000 31.78 7.28 39.82 2.69
697 1749 6.248629 GCTAATTAGCGCTAAAGTTGTTTGAC 59.751 38.462 31.78 13.56 39.82 3.18
698 1750 2.663279 AGCGCTAAAGTTGTTTGACG 57.337 45.000 8.99 0.00 0.00 4.35
699 1751 1.937899 AGCGCTAAAGTTGTTTGACGT 59.062 42.857 8.99 0.00 31.49 4.34
700 1752 3.125316 AGCGCTAAAGTTGTTTGACGTA 58.875 40.909 8.99 0.00 31.49 3.57
701 1753 3.183775 AGCGCTAAAGTTGTTTGACGTAG 59.816 43.478 8.99 0.00 31.49 3.51
702 1754 3.466836 CGCTAAAGTTGTTTGACGTAGC 58.533 45.455 0.00 0.00 36.00 3.58
703 1755 3.663493 CGCTAAAGTTGTTTGACGTAGCC 60.663 47.826 0.00 0.00 35.97 3.93
704 1756 3.497262 GCTAAAGTTGTTTGACGTAGCCT 59.503 43.478 0.00 0.00 34.60 4.58
705 1757 4.687483 GCTAAAGTTGTTTGACGTAGCCTA 59.313 41.667 0.00 0.00 34.60 3.93
706 1758 5.178067 GCTAAAGTTGTTTGACGTAGCCTAA 59.822 40.000 0.00 0.00 34.60 2.69
707 1759 6.128363 GCTAAAGTTGTTTGACGTAGCCTAAT 60.128 38.462 0.00 0.00 34.60 1.73
708 1760 6.628919 AAAGTTGTTTGACGTAGCCTAATT 57.371 33.333 0.00 0.00 0.00 1.40
709 1761 7.733402 AAAGTTGTTTGACGTAGCCTAATTA 57.267 32.000 0.00 0.00 0.00 1.40
710 1762 7.733402 AAGTTGTTTGACGTAGCCTAATTAA 57.267 32.000 0.00 0.00 0.00 1.40
711 1763 7.125536 AGTTGTTTGACGTAGCCTAATTAAC 57.874 36.000 0.00 0.00 0.00 2.01
712 1764 6.932960 AGTTGTTTGACGTAGCCTAATTAACT 59.067 34.615 0.00 0.00 0.00 2.24
713 1765 7.443272 AGTTGTTTGACGTAGCCTAATTAACTT 59.557 33.333 0.00 0.00 0.00 2.66
714 1766 8.711457 GTTGTTTGACGTAGCCTAATTAACTTA 58.289 33.333 0.00 0.00 0.00 2.24
715 1767 8.243289 TGTTTGACGTAGCCTAATTAACTTAC 57.757 34.615 0.00 0.00 0.00 2.34
716 1768 7.871973 TGTTTGACGTAGCCTAATTAACTTACA 59.128 33.333 0.00 0.00 0.00 2.41
717 1769 8.876790 GTTTGACGTAGCCTAATTAACTTACAT 58.123 33.333 0.00 0.00 0.00 2.29
718 1770 8.638685 TTGACGTAGCCTAATTAACTTACATC 57.361 34.615 0.00 0.00 0.00 3.06
719 1771 7.774134 TGACGTAGCCTAATTAACTTACATCA 58.226 34.615 0.00 0.00 0.00 3.07
720 1772 7.919091 TGACGTAGCCTAATTAACTTACATCAG 59.081 37.037 0.00 0.00 0.00 2.90
721 1773 8.004087 ACGTAGCCTAATTAACTTACATCAGA 57.996 34.615 0.00 0.00 0.00 3.27
722 1774 7.919621 ACGTAGCCTAATTAACTTACATCAGAC 59.080 37.037 0.00 0.00 0.00 3.51
723 1775 8.136165 CGTAGCCTAATTAACTTACATCAGACT 58.864 37.037 0.00 0.00 0.00 3.24
724 1776 9.465985 GTAGCCTAATTAACTTACATCAGACTC 57.534 37.037 0.00 0.00 0.00 3.36
725 1777 7.501844 AGCCTAATTAACTTACATCAGACTCC 58.498 38.462 0.00 0.00 0.00 3.85
726 1778 6.706716 GCCTAATTAACTTACATCAGACTCCC 59.293 42.308 0.00 0.00 0.00 4.30
727 1779 7.635089 GCCTAATTAACTTACATCAGACTCCCA 60.635 40.741 0.00 0.00 0.00 4.37
728 1780 7.711339 CCTAATTAACTTACATCAGACTCCCAC 59.289 40.741 0.00 0.00 0.00 4.61
729 1781 6.875972 ATTAACTTACATCAGACTCCCACT 57.124 37.500 0.00 0.00 0.00 4.00
730 1782 4.810191 AACTTACATCAGACTCCCACTC 57.190 45.455 0.00 0.00 0.00 3.51
731 1783 4.054359 ACTTACATCAGACTCCCACTCT 57.946 45.455 0.00 0.00 0.00 3.24
732 1784 3.766591 ACTTACATCAGACTCCCACTCTG 59.233 47.826 0.00 0.00 37.14 3.35
733 1785 2.612285 ACATCAGACTCCCACTCTGA 57.388 50.000 0.77 0.77 46.39 3.27
734 1786 2.894731 ACATCAGACTCCCACTCTGAA 58.105 47.619 2.39 0.00 45.67 3.02
735 1787 3.242867 ACATCAGACTCCCACTCTGAAA 58.757 45.455 2.39 0.00 45.67 2.69
736 1788 3.648067 ACATCAGACTCCCACTCTGAAAA 59.352 43.478 2.39 0.00 45.67 2.29
737 1789 4.252073 CATCAGACTCCCACTCTGAAAAG 58.748 47.826 2.39 0.00 45.67 2.27
738 1790 3.309296 TCAGACTCCCACTCTGAAAAGT 58.691 45.455 0.00 0.00 40.98 2.66
739 1791 3.070159 TCAGACTCCCACTCTGAAAAGTG 59.930 47.826 0.00 0.00 40.98 3.16
748 1800 5.169836 CACTCTGAAAAGTGGTTGGTTAC 57.830 43.478 0.00 0.00 42.42 2.50
749 1801 3.875134 ACTCTGAAAAGTGGTTGGTTACG 59.125 43.478 0.00 0.00 0.00 3.18
750 1802 3.207778 TCTGAAAAGTGGTTGGTTACGG 58.792 45.455 0.00 0.00 0.00 4.02
751 1803 2.946990 CTGAAAAGTGGTTGGTTACGGT 59.053 45.455 0.00 0.00 0.00 4.83
752 1804 3.354467 TGAAAAGTGGTTGGTTACGGTT 58.646 40.909 0.00 0.00 0.00 4.44
753 1805 3.762823 TGAAAAGTGGTTGGTTACGGTTT 59.237 39.130 0.00 0.00 0.00 3.27
754 1806 4.142425 TGAAAAGTGGTTGGTTACGGTTTC 60.142 41.667 0.00 0.00 0.00 2.78
755 1807 1.585297 AGTGGTTGGTTACGGTTTCG 58.415 50.000 0.00 0.00 43.02 3.46
756 1808 0.587768 GTGGTTGGTTACGGTTTCGG 59.412 55.000 0.00 0.00 41.39 4.30
757 1809 1.165284 TGGTTGGTTACGGTTTCGGC 61.165 55.000 0.00 0.00 41.39 5.54
758 1810 1.165284 GGTTGGTTACGGTTTCGGCA 61.165 55.000 0.00 0.00 41.39 5.69
759 1811 0.876399 GTTGGTTACGGTTTCGGCAT 59.124 50.000 0.00 0.00 41.39 4.40
760 1812 1.135888 GTTGGTTACGGTTTCGGCATC 60.136 52.381 0.00 0.00 41.39 3.91
761 1813 0.035036 TGGTTACGGTTTCGGCATCA 59.965 50.000 0.00 0.00 41.39 3.07
762 1814 1.158434 GGTTACGGTTTCGGCATCAA 58.842 50.000 0.00 0.00 41.39 2.57
763 1815 1.129811 GGTTACGGTTTCGGCATCAAG 59.870 52.381 0.00 0.00 41.39 3.02
764 1816 1.802365 GTTACGGTTTCGGCATCAAGT 59.198 47.619 0.00 0.00 41.39 3.16
765 1817 2.995258 GTTACGGTTTCGGCATCAAGTA 59.005 45.455 0.00 0.00 41.39 2.24
766 1818 1.722011 ACGGTTTCGGCATCAAGTAG 58.278 50.000 0.00 0.00 41.39 2.57
767 1819 1.001633 ACGGTTTCGGCATCAAGTAGT 59.998 47.619 0.00 0.00 41.39 2.73
768 1820 1.659098 CGGTTTCGGCATCAAGTAGTC 59.341 52.381 0.00 0.00 0.00 2.59
769 1821 2.695359 GGTTTCGGCATCAAGTAGTCA 58.305 47.619 0.00 0.00 0.00 3.41
770 1822 3.071479 GGTTTCGGCATCAAGTAGTCAA 58.929 45.455 0.00 0.00 0.00 3.18
771 1823 3.500680 GGTTTCGGCATCAAGTAGTCAAA 59.499 43.478 0.00 0.00 0.00 2.69
772 1824 4.378459 GGTTTCGGCATCAAGTAGTCAAAG 60.378 45.833 0.00 0.00 0.00 2.77
773 1825 3.953712 TCGGCATCAAGTAGTCAAAGA 57.046 42.857 0.00 0.00 0.00 2.52
774 1826 4.265904 TCGGCATCAAGTAGTCAAAGAA 57.734 40.909 0.00 0.00 0.00 2.52
775 1827 4.245660 TCGGCATCAAGTAGTCAAAGAAG 58.754 43.478 0.00 0.00 0.00 2.85
776 1828 4.021456 TCGGCATCAAGTAGTCAAAGAAGA 60.021 41.667 0.00 0.00 0.00 2.87
777 1829 4.092091 CGGCATCAAGTAGTCAAAGAAGAC 59.908 45.833 0.00 0.00 38.81 3.01
778 1830 4.997395 GGCATCAAGTAGTCAAAGAAGACA 59.003 41.667 0.00 0.00 40.98 3.41
779 1831 5.121454 GGCATCAAGTAGTCAAAGAAGACAG 59.879 44.000 0.00 0.00 40.98 3.51
780 1832 5.698545 GCATCAAGTAGTCAAAGAAGACAGT 59.301 40.000 0.00 0.00 40.98 3.55
781 1833 6.868864 GCATCAAGTAGTCAAAGAAGACAGTA 59.131 38.462 0.00 0.00 40.98 2.74
782 1834 7.148722 GCATCAAGTAGTCAAAGAAGACAGTAC 60.149 40.741 0.00 0.00 40.98 2.73
783 1835 7.342769 TCAAGTAGTCAAAGAAGACAGTACA 57.657 36.000 0.00 0.00 40.98 2.90
784 1836 7.778083 TCAAGTAGTCAAAGAAGACAGTACAA 58.222 34.615 0.00 0.00 40.98 2.41
785 1837 8.255206 TCAAGTAGTCAAAGAAGACAGTACAAA 58.745 33.333 0.00 0.00 40.98 2.83
786 1838 8.879759 CAAGTAGTCAAAGAAGACAGTACAAAA 58.120 33.333 0.00 0.00 40.98 2.44
787 1839 9.614792 AAGTAGTCAAAGAAGACAGTACAAAAT 57.385 29.630 0.00 0.00 40.98 1.82
788 1840 9.614792 AGTAGTCAAAGAAGACAGTACAAAATT 57.385 29.630 0.00 0.00 40.98 1.82
855 1907 1.666011 GCCGCCGGAATCTATCTCA 59.334 57.895 7.68 0.00 0.00 3.27
922 1978 1.915078 CTCGGGCTGTTTGAGGGGAT 61.915 60.000 0.00 0.00 0.00 3.85
1331 2394 1.074084 TGAAGGGCCGTGGTTATTCAA 59.926 47.619 0.00 0.00 0.00 2.69
1610 2674 3.254411 GCAAAGAAGGGAGAAGAAAGTGG 59.746 47.826 0.00 0.00 0.00 4.00
1724 2789 5.046014 AGCATGATGAGTCTACCTTTGAGTT 60.046 40.000 0.00 0.00 0.00 3.01
1917 2985 0.892755 CCCAACATCAGCAGCAACAT 59.107 50.000 0.00 0.00 0.00 2.71
1978 3046 4.232091 GAATGAGAATAGGGGGAGTACCA 58.768 47.826 0.00 0.00 42.91 3.25
2613 3682 3.181443 GGGTGGCTATAAAGGTGCACTAT 60.181 47.826 17.98 9.45 0.00 2.12
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 1.670590 CCGGTAACCGTGGTAACCA 59.329 57.895 0.00 0.00 46.80 3.67
4 5 1.079197 CCCGGTAACCGTGGTAACC 60.079 63.158 0.00 0.00 46.80 2.85
5 6 0.320050 TTCCCGGTAACCGTGGTAAC 59.680 55.000 0.00 0.00 46.80 2.50
6 7 1.051812 TTTCCCGGTAACCGTGGTAA 58.948 50.000 0.00 0.00 46.80 2.85
7 8 1.274712 ATTTCCCGGTAACCGTGGTA 58.725 50.000 0.00 0.00 46.80 3.25
9 10 1.655484 GTATTTCCCGGTAACCGTGG 58.345 55.000 0.00 0.00 46.80 4.94
10 11 1.655484 GGTATTTCCCGGTAACCGTG 58.345 55.000 0.00 0.00 46.80 4.94
11 12 0.175531 CGGTATTTCCCGGTAACCGT 59.824 55.000 17.24 0.00 46.80 4.83
20 21 4.038402 TCTCGGTATTTCTCGGTATTTCCC 59.962 45.833 0.00 0.00 0.00 3.97
21 22 5.192327 TCTCGGTATTTCTCGGTATTTCC 57.808 43.478 0.00 0.00 0.00 3.13
22 23 8.983307 ATATTCTCGGTATTTCTCGGTATTTC 57.017 34.615 0.00 0.00 0.00 2.17
23 24 9.774413 AAATATTCTCGGTATTTCTCGGTATTT 57.226 29.630 0.00 0.00 28.29 1.40
24 25 9.420551 GAAATATTCTCGGTATTTCTCGGTATT 57.579 33.333 9.99 0.00 41.76 1.89
25 26 7.754027 CGAAATATTCTCGGTATTTCTCGGTAT 59.246 37.037 13.53 0.00 42.35 2.73
26 27 7.041167 TCGAAATATTCTCGGTATTTCTCGGTA 60.041 37.037 15.30 0.00 42.35 4.02
27 28 5.919141 CGAAATATTCTCGGTATTTCTCGGT 59.081 40.000 13.53 0.00 42.35 4.69
28 29 6.147581 TCGAAATATTCTCGGTATTTCTCGG 58.852 40.000 15.30 3.07 42.35 4.63
29 30 7.491683 GTTCGAAATATTCTCGGTATTTCTCG 58.508 38.462 0.00 6.03 42.35 4.04
30 31 7.377928 TCGTTCGAAATATTCTCGGTATTTCTC 59.622 37.037 0.00 6.33 42.35 2.87
31 32 7.198390 TCGTTCGAAATATTCTCGGTATTTCT 58.802 34.615 0.00 0.00 42.35 2.52
32 33 7.385668 TCGTTCGAAATATTCTCGGTATTTC 57.614 36.000 0.00 8.01 41.66 2.17
33 34 7.760131 TTCGTTCGAAATATTCTCGGTATTT 57.240 32.000 0.00 0.00 36.93 1.40
34 35 7.941795 ATTCGTTCGAAATATTCTCGGTATT 57.058 32.000 11.50 0.00 36.93 1.89
35 36 7.941795 AATTCGTTCGAAATATTCTCGGTAT 57.058 32.000 11.50 0.00 36.93 2.73
36 37 7.760131 AAATTCGTTCGAAATATTCTCGGTA 57.240 32.000 11.50 6.19 36.93 4.02
37 38 6.657836 AAATTCGTTCGAAATATTCTCGGT 57.342 33.333 11.50 0.00 36.93 4.69
38 39 6.959311 ACAAAATTCGTTCGAAATATTCTCGG 59.041 34.615 11.50 5.14 36.93 4.63
39 40 7.932643 ACAAAATTCGTTCGAAATATTCTCG 57.067 32.000 11.50 11.44 37.66 4.04
40 41 9.968743 ACTACAAAATTCGTTCGAAATATTCTC 57.031 29.630 11.50 0.00 0.00 2.87
46 47 9.458374 AATTCAACTACAAAATTCGTTCGAAAT 57.542 25.926 11.50 0.71 0.00 2.17
47 48 8.844441 AATTCAACTACAAAATTCGTTCGAAA 57.156 26.923 11.50 0.00 0.00 3.46
48 49 8.844441 AAATTCAACTACAAAATTCGTTCGAA 57.156 26.923 9.97 9.97 0.00 3.71
49 50 8.738554 CAAAATTCAACTACAAAATTCGTTCGA 58.261 29.630 0.00 0.00 0.00 3.71
50 51 8.738554 TCAAAATTCAACTACAAAATTCGTTCG 58.261 29.630 0.00 0.00 0.00 3.95
90 91 7.442062 GGTCTTTGGTTTGAATGTTCATTCATT 59.558 33.333 23.02 4.60 39.92 2.57
91 92 6.930722 GGTCTTTGGTTTGAATGTTCATTCAT 59.069 34.615 23.02 0.00 39.92 2.57
92 93 6.279882 GGTCTTTGGTTTGAATGTTCATTCA 58.720 36.000 19.96 19.96 38.64 2.57
93 94 5.696270 GGGTCTTTGGTTTGAATGTTCATTC 59.304 40.000 15.89 15.89 37.00 2.67
94 95 5.610398 GGGTCTTTGGTTTGAATGTTCATT 58.390 37.500 0.00 0.00 37.00 2.57
95 96 4.261994 CGGGTCTTTGGTTTGAATGTTCAT 60.262 41.667 0.00 0.00 37.00 2.57
96 97 3.067461 CGGGTCTTTGGTTTGAATGTTCA 59.933 43.478 0.00 0.00 34.92 3.18
97 98 3.067601 ACGGGTCTTTGGTTTGAATGTTC 59.932 43.478 0.00 0.00 0.00 3.18
98 99 3.028130 ACGGGTCTTTGGTTTGAATGTT 58.972 40.909 0.00 0.00 0.00 2.71
99 100 2.621526 GACGGGTCTTTGGTTTGAATGT 59.378 45.455 0.00 0.00 0.00 2.71
100 101 2.621055 TGACGGGTCTTTGGTTTGAATG 59.379 45.455 0.00 0.00 0.00 2.67
101 102 2.938838 TGACGGGTCTTTGGTTTGAAT 58.061 42.857 0.00 0.00 0.00 2.57
102 103 2.421751 TGACGGGTCTTTGGTTTGAA 57.578 45.000 0.00 0.00 0.00 2.69
103 104 2.421751 TTGACGGGTCTTTGGTTTGA 57.578 45.000 0.00 0.00 0.00 2.69
104 105 3.183754 GTTTTGACGGGTCTTTGGTTTG 58.816 45.455 0.00 0.00 0.00 2.93
105 106 2.826725 TGTTTTGACGGGTCTTTGGTTT 59.173 40.909 0.00 0.00 0.00 3.27
106 107 2.425668 CTGTTTTGACGGGTCTTTGGTT 59.574 45.455 0.00 0.00 0.00 3.67
107 108 2.021457 CTGTTTTGACGGGTCTTTGGT 58.979 47.619 0.00 0.00 0.00 3.67
108 109 1.336755 CCTGTTTTGACGGGTCTTTGG 59.663 52.381 0.00 0.00 0.00 3.28
109 110 2.294074 TCCTGTTTTGACGGGTCTTTG 58.706 47.619 4.46 0.00 37.42 2.77
110 111 2.686405 GTTCCTGTTTTGACGGGTCTTT 59.314 45.455 4.46 0.00 37.42 2.52
111 112 2.092592 AGTTCCTGTTTTGACGGGTCTT 60.093 45.455 4.46 0.00 37.42 3.01
112 113 1.489230 AGTTCCTGTTTTGACGGGTCT 59.511 47.619 4.46 2.71 37.42 3.85
113 114 1.963172 AGTTCCTGTTTTGACGGGTC 58.037 50.000 4.46 0.00 37.42 4.46
114 115 2.224450 CCTAGTTCCTGTTTTGACGGGT 60.224 50.000 4.46 0.00 37.42 5.28
115 116 2.224450 ACCTAGTTCCTGTTTTGACGGG 60.224 50.000 0.00 0.00 37.50 5.28
116 117 3.121738 ACCTAGTTCCTGTTTTGACGG 57.878 47.619 0.00 0.00 0.00 4.79
117 118 3.303791 GCAACCTAGTTCCTGTTTTGACG 60.304 47.826 0.00 0.00 0.00 4.35
118 119 3.883489 AGCAACCTAGTTCCTGTTTTGAC 59.117 43.478 0.00 0.00 0.00 3.18
119 120 4.164843 AGCAACCTAGTTCCTGTTTTGA 57.835 40.909 0.00 0.00 0.00 2.69
120 121 4.084013 CGTAGCAACCTAGTTCCTGTTTTG 60.084 45.833 0.00 0.00 0.00 2.44
121 122 4.062991 CGTAGCAACCTAGTTCCTGTTTT 58.937 43.478 0.00 0.00 0.00 2.43
122 123 3.322828 TCGTAGCAACCTAGTTCCTGTTT 59.677 43.478 0.00 0.00 0.00 2.83
123 124 2.895404 TCGTAGCAACCTAGTTCCTGTT 59.105 45.455 0.00 0.00 0.00 3.16
124 125 2.522185 TCGTAGCAACCTAGTTCCTGT 58.478 47.619 0.00 0.00 0.00 4.00
125 126 3.251571 GTTCGTAGCAACCTAGTTCCTG 58.748 50.000 0.00 0.00 0.00 3.86
126 127 2.895404 TGTTCGTAGCAACCTAGTTCCT 59.105 45.455 0.00 0.00 0.00 3.36
127 128 2.991866 GTGTTCGTAGCAACCTAGTTCC 59.008 50.000 0.00 0.00 0.00 3.62
128 129 2.660236 CGTGTTCGTAGCAACCTAGTTC 59.340 50.000 0.00 0.00 0.00 3.01
129 130 2.669364 CGTGTTCGTAGCAACCTAGTT 58.331 47.619 0.00 0.00 0.00 2.24
130 131 2.342910 CGTGTTCGTAGCAACCTAGT 57.657 50.000 0.00 0.00 0.00 2.57
142 143 3.309388 AGAGTTGATTCTGACGTGTTCG 58.691 45.455 0.00 0.00 43.34 3.95
143 144 3.675698 GGAGAGTTGATTCTGACGTGTTC 59.324 47.826 0.00 0.00 0.00 3.18
144 145 3.322254 AGGAGAGTTGATTCTGACGTGTT 59.678 43.478 0.00 0.00 0.00 3.32
145 146 2.894126 AGGAGAGTTGATTCTGACGTGT 59.106 45.455 0.00 0.00 0.00 4.49
146 147 3.584406 AGGAGAGTTGATTCTGACGTG 57.416 47.619 0.00 0.00 0.00 4.49
147 148 3.862642 GCAAGGAGAGTTGATTCTGACGT 60.863 47.826 0.00 0.00 0.00 4.34
148 149 2.670414 GCAAGGAGAGTTGATTCTGACG 59.330 50.000 0.00 0.00 0.00 4.35
149 150 3.668447 TGCAAGGAGAGTTGATTCTGAC 58.332 45.455 0.00 0.00 0.00 3.51
150 151 4.564782 ATGCAAGGAGAGTTGATTCTGA 57.435 40.909 0.00 0.00 0.00 3.27
151 152 6.748333 TTAATGCAAGGAGAGTTGATTCTG 57.252 37.500 0.00 0.00 0.00 3.02
152 153 7.951347 AATTAATGCAAGGAGAGTTGATTCT 57.049 32.000 0.00 0.00 0.00 2.40
153 154 9.113838 TCTAATTAATGCAAGGAGAGTTGATTC 57.886 33.333 0.00 0.00 0.00 2.52
154 155 9.638176 ATCTAATTAATGCAAGGAGAGTTGATT 57.362 29.630 0.00 0.00 0.00 2.57
155 156 9.282569 GATCTAATTAATGCAAGGAGAGTTGAT 57.717 33.333 0.00 0.00 0.00 2.57
156 157 7.716998 GGATCTAATTAATGCAAGGAGAGTTGA 59.283 37.037 0.00 0.00 0.00 3.18
157 158 7.718753 AGGATCTAATTAATGCAAGGAGAGTTG 59.281 37.037 0.00 0.00 0.00 3.16
158 159 7.810260 AGGATCTAATTAATGCAAGGAGAGTT 58.190 34.615 0.00 0.00 0.00 3.01
159 160 7.385894 AGGATCTAATTAATGCAAGGAGAGT 57.614 36.000 0.00 0.00 0.00 3.24
160 161 8.040132 CCTAGGATCTAATTAATGCAAGGAGAG 58.960 40.741 1.05 0.00 0.00 3.20
161 162 7.527868 GCCTAGGATCTAATTAATGCAAGGAGA 60.528 40.741 14.75 0.00 0.00 3.71
162 163 6.597280 GCCTAGGATCTAATTAATGCAAGGAG 59.403 42.308 14.75 0.00 0.00 3.69
163 164 6.044287 TGCCTAGGATCTAATTAATGCAAGGA 59.956 38.462 14.75 0.00 0.00 3.36
164 165 6.150140 GTGCCTAGGATCTAATTAATGCAAGG 59.850 42.308 14.75 0.00 0.00 3.61
165 166 6.939163 AGTGCCTAGGATCTAATTAATGCAAG 59.061 38.462 14.75 0.00 0.00 4.01
166 167 6.841601 AGTGCCTAGGATCTAATTAATGCAA 58.158 36.000 14.75 0.00 0.00 4.08
167 168 6.439636 AGTGCCTAGGATCTAATTAATGCA 57.560 37.500 14.75 0.00 0.00 3.96
168 169 7.751768 AAAGTGCCTAGGATCTAATTAATGC 57.248 36.000 14.75 0.00 0.00 3.56
172 173 9.650714 TGTAGTAAAGTGCCTAGGATCTAATTA 57.349 33.333 14.75 3.70 0.00 1.40
173 174 8.548880 TGTAGTAAAGTGCCTAGGATCTAATT 57.451 34.615 14.75 4.62 0.00 1.40
174 175 8.548880 TTGTAGTAAAGTGCCTAGGATCTAAT 57.451 34.615 14.75 5.24 0.00 1.73
175 176 7.966339 TTGTAGTAAAGTGCCTAGGATCTAA 57.034 36.000 14.75 0.00 0.00 2.10
176 177 7.966339 TTTGTAGTAAAGTGCCTAGGATCTA 57.034 36.000 14.75 0.91 0.00 1.98
177 178 6.869206 TTTGTAGTAAAGTGCCTAGGATCT 57.131 37.500 14.75 6.65 0.00 2.75
178 179 6.421202 CGATTTGTAGTAAAGTGCCTAGGATC 59.579 42.308 14.75 4.08 0.00 3.36
179 180 6.097839 TCGATTTGTAGTAAAGTGCCTAGGAT 59.902 38.462 14.75 0.00 0.00 3.24
180 181 5.419788 TCGATTTGTAGTAAAGTGCCTAGGA 59.580 40.000 14.75 0.00 0.00 2.94
181 182 5.657474 TCGATTTGTAGTAAAGTGCCTAGG 58.343 41.667 3.67 3.67 0.00 3.02
182 183 5.232414 GCTCGATTTGTAGTAAAGTGCCTAG 59.768 44.000 0.00 0.00 0.00 3.02
183 184 5.107133 GCTCGATTTGTAGTAAAGTGCCTA 58.893 41.667 0.00 0.00 0.00 3.93
184 185 3.933332 GCTCGATTTGTAGTAAAGTGCCT 59.067 43.478 0.00 0.00 0.00 4.75
185 186 3.241995 CGCTCGATTTGTAGTAAAGTGCC 60.242 47.826 0.00 0.00 0.00 5.01
186 187 3.367025 ACGCTCGATTTGTAGTAAAGTGC 59.633 43.478 0.00 0.00 0.00 4.40
187 188 5.511088 AACGCTCGATTTGTAGTAAAGTG 57.489 39.130 0.00 0.00 0.00 3.16
188 189 7.642071 TTTAACGCTCGATTTGTAGTAAAGT 57.358 32.000 0.00 0.00 0.00 2.66
189 190 9.537848 AATTTTAACGCTCGATTTGTAGTAAAG 57.462 29.630 0.00 0.00 0.00 1.85
190 191 9.532697 GAATTTTAACGCTCGATTTGTAGTAAA 57.467 29.630 0.00 0.00 0.00 2.01
191 192 8.710551 TGAATTTTAACGCTCGATTTGTAGTAA 58.289 29.630 0.00 0.00 0.00 2.24
192 193 8.242085 TGAATTTTAACGCTCGATTTGTAGTA 57.758 30.769 0.00 0.00 0.00 1.82
193 194 7.124347 TGAATTTTAACGCTCGATTTGTAGT 57.876 32.000 0.00 0.00 0.00 2.73
194 195 8.429739 TTTGAATTTTAACGCTCGATTTGTAG 57.570 30.769 0.00 0.00 0.00 2.74
195 196 8.783999 TTTTGAATTTTAACGCTCGATTTGTA 57.216 26.923 0.00 0.00 0.00 2.41
196 197 7.687005 TTTTGAATTTTAACGCTCGATTTGT 57.313 28.000 0.00 0.00 0.00 2.83
197 198 9.579610 AAATTTTGAATTTTAACGCTCGATTTG 57.420 25.926 0.00 0.00 0.00 2.32
199 200 9.791838 GAAAATTTTGAATTTTAACGCTCGATT 57.208 25.926 8.47 0.00 32.03 3.34
200 201 8.973378 TGAAAATTTTGAATTTTAACGCTCGAT 58.027 25.926 8.47 0.00 32.03 3.59
201 202 8.341477 TGAAAATTTTGAATTTTAACGCTCGA 57.659 26.923 8.47 0.00 32.03 4.04
202 203 8.964367 TTGAAAATTTTGAATTTTAACGCTCG 57.036 26.923 8.47 0.00 32.03 5.03
240 241 6.128227 CGGTAAATCCACATTCCGAGTAAAAA 60.128 38.462 0.00 0.00 40.29 1.94
241 242 5.352016 CGGTAAATCCACATTCCGAGTAAAA 59.648 40.000 0.00 0.00 40.29 1.52
242 243 4.871557 CGGTAAATCCACATTCCGAGTAAA 59.128 41.667 0.00 0.00 40.29 2.01
243 244 4.160065 TCGGTAAATCCACATTCCGAGTAA 59.840 41.667 0.00 0.00 41.45 2.24
244 245 3.700539 TCGGTAAATCCACATTCCGAGTA 59.299 43.478 0.00 0.00 41.45 2.59
245 246 2.498481 TCGGTAAATCCACATTCCGAGT 59.502 45.455 0.00 0.00 41.45 4.18
246 247 3.173668 TCGGTAAATCCACATTCCGAG 57.826 47.619 0.00 0.00 41.45 4.63
247 248 2.159014 CCTCGGTAAATCCACATTCCGA 60.159 50.000 0.00 0.00 43.52 4.55
248 249 2.210116 CCTCGGTAAATCCACATTCCG 58.790 52.381 0.00 0.00 39.40 4.30
249 250 2.572290 CCCTCGGTAAATCCACATTCC 58.428 52.381 0.00 0.00 35.57 3.01
250 251 2.572290 CCCCTCGGTAAATCCACATTC 58.428 52.381 0.00 0.00 35.57 2.67
251 252 1.409661 GCCCCTCGGTAAATCCACATT 60.410 52.381 0.00 0.00 35.57 2.71
252 253 0.182775 GCCCCTCGGTAAATCCACAT 59.817 55.000 0.00 0.00 35.57 3.21
253 254 1.202099 TGCCCCTCGGTAAATCCACA 61.202 55.000 0.00 0.00 35.57 4.17
254 255 0.746923 GTGCCCCTCGGTAAATCCAC 60.747 60.000 0.00 0.00 35.57 4.02
255 256 1.605453 GTGCCCCTCGGTAAATCCA 59.395 57.895 0.00 0.00 35.57 3.41
256 257 1.523032 CGTGCCCCTCGGTAAATCC 60.523 63.158 0.00 0.00 0.00 3.01
257 258 1.523032 CCGTGCCCCTCGGTAAATC 60.523 63.158 0.00 0.00 42.62 2.17
258 259 1.555477 TTCCGTGCCCCTCGGTAAAT 61.555 55.000 4.36 0.00 46.86 1.40
259 260 1.766625 TTTCCGTGCCCCTCGGTAAA 61.767 55.000 4.36 2.21 46.86 2.01
260 261 1.555477 ATTTCCGTGCCCCTCGGTAA 61.555 55.000 4.36 1.98 46.86 2.85
261 262 0.687098 TATTTCCGTGCCCCTCGGTA 60.687 55.000 4.36 0.00 46.86 4.02
262 263 1.991167 TATTTCCGTGCCCCTCGGT 60.991 57.895 4.36 0.00 46.86 4.69
264 265 1.881252 CGTATTTCCGTGCCCCTCG 60.881 63.158 0.00 0.00 0.00 4.63
265 266 2.178235 GCGTATTTCCGTGCCCCTC 61.178 63.158 0.00 0.00 0.00 4.30
266 267 2.124860 GCGTATTTCCGTGCCCCT 60.125 61.111 0.00 0.00 0.00 4.79
267 268 3.569690 CGCGTATTTCCGTGCCCC 61.570 66.667 0.00 0.00 0.00 5.80
268 269 2.904470 TACCGCGTATTTCCGTGCCC 62.904 60.000 4.92 0.00 37.03 5.36
269 270 1.083242 TTACCGCGTATTTCCGTGCC 61.083 55.000 4.92 0.00 37.03 5.01
270 271 0.025384 GTTACCGCGTATTTCCGTGC 59.975 55.000 4.92 0.00 37.03 5.34
271 272 0.646895 GGTTACCGCGTATTTCCGTG 59.353 55.000 4.92 0.00 38.04 4.94
272 273 0.246086 TGGTTACCGCGTATTTCCGT 59.754 50.000 4.92 0.00 0.00 4.69
273 274 1.259507 CATGGTTACCGCGTATTTCCG 59.740 52.381 4.92 0.00 0.00 4.30
274 275 1.600485 CCATGGTTACCGCGTATTTCC 59.400 52.381 4.92 1.35 0.00 3.13
275 276 1.600485 CCCATGGTTACCGCGTATTTC 59.400 52.381 11.73 0.00 0.00 2.17
276 277 1.209990 TCCCATGGTTACCGCGTATTT 59.790 47.619 11.73 0.00 0.00 1.40
277 278 0.831966 TCCCATGGTTACCGCGTATT 59.168 50.000 11.73 0.00 0.00 1.89
278 279 0.831966 TTCCCATGGTTACCGCGTAT 59.168 50.000 11.73 0.00 0.00 3.06
279 280 0.612229 TTTCCCATGGTTACCGCGTA 59.388 50.000 11.73 0.00 0.00 4.42
280 281 0.034863 ATTTCCCATGGTTACCGCGT 60.035 50.000 11.73 0.00 0.00 6.01
281 282 0.661020 GATTTCCCATGGTTACCGCG 59.339 55.000 11.73 0.00 0.00 6.46
282 283 2.052782 AGATTTCCCATGGTTACCGC 57.947 50.000 11.73 0.00 0.00 5.68
283 284 3.616219 TCAAGATTTCCCATGGTTACCG 58.384 45.455 11.73 0.00 0.00 4.02
284 285 5.993748 TTTCAAGATTTCCCATGGTTACC 57.006 39.130 11.73 0.00 0.00 2.85
285 286 7.275560 CGAAATTTCAAGATTTCCCATGGTTAC 59.724 37.037 17.99 0.00 41.02 2.50
286 287 7.177568 TCGAAATTTCAAGATTTCCCATGGTTA 59.822 33.333 17.99 0.00 41.02 2.85
287 288 6.014669 TCGAAATTTCAAGATTTCCCATGGTT 60.015 34.615 17.99 0.00 41.02 3.67
288 289 5.480073 TCGAAATTTCAAGATTTCCCATGGT 59.520 36.000 17.99 0.00 41.02 3.55
289 290 5.807011 GTCGAAATTTCAAGATTTCCCATGG 59.193 40.000 17.99 4.14 41.02 3.66
290 291 6.529125 CAGTCGAAATTTCAAGATTTCCCATG 59.471 38.462 17.99 0.00 41.02 3.66
291 292 6.350445 CCAGTCGAAATTTCAAGATTTCCCAT 60.350 38.462 17.99 0.00 41.02 4.00
292 293 5.048083 CCAGTCGAAATTTCAAGATTTCCCA 60.048 40.000 17.99 0.00 41.02 4.37
293 294 5.048013 ACCAGTCGAAATTTCAAGATTTCCC 60.048 40.000 17.99 0.00 41.02 3.97
294 295 6.013842 ACCAGTCGAAATTTCAAGATTTCC 57.986 37.500 17.99 0.00 41.02 3.13
295 296 7.537649 GGTTACCAGTCGAAATTTCAAGATTTC 59.462 37.037 17.99 0.00 40.80 2.17
296 297 7.013846 TGGTTACCAGTCGAAATTTCAAGATTT 59.986 33.333 17.99 0.99 32.16 2.17
297 298 6.488683 TGGTTACCAGTCGAAATTTCAAGATT 59.511 34.615 17.99 2.59 0.00 2.40
298 299 6.001460 TGGTTACCAGTCGAAATTTCAAGAT 58.999 36.000 17.99 1.22 0.00 2.40
299 300 5.369833 TGGTTACCAGTCGAAATTTCAAGA 58.630 37.500 17.99 5.43 0.00 3.02
300 301 5.682943 TGGTTACCAGTCGAAATTTCAAG 57.317 39.130 17.99 3.07 0.00 3.02
301 302 6.452494 TTTGGTTACCAGTCGAAATTTCAA 57.548 33.333 17.99 0.00 33.81 2.69
302 303 6.267070 GTTTTGGTTACCAGTCGAAATTTCA 58.733 36.000 17.99 2.95 33.81 2.69
303 304 5.688621 GGTTTTGGTTACCAGTCGAAATTTC 59.311 40.000 3.65 8.20 33.81 2.17
304 305 5.361571 AGGTTTTGGTTACCAGTCGAAATTT 59.638 36.000 3.65 0.00 38.16 1.82
305 306 4.891168 AGGTTTTGGTTACCAGTCGAAATT 59.109 37.500 3.65 0.00 38.16 1.82
306 307 4.466827 AGGTTTTGGTTACCAGTCGAAAT 58.533 39.130 3.65 0.00 38.16 2.17
307 308 3.888583 AGGTTTTGGTTACCAGTCGAAA 58.111 40.909 3.65 0.00 38.16 3.46
308 309 3.564053 AGGTTTTGGTTACCAGTCGAA 57.436 42.857 3.65 0.00 38.16 3.71
309 310 3.207778 CAAGGTTTTGGTTACCAGTCGA 58.792 45.455 3.65 0.00 38.16 4.20
310 311 3.619233 CAAGGTTTTGGTTACCAGTCG 57.381 47.619 3.65 0.00 38.16 4.18
321 322 2.139484 TGCCAGGCCCAAGGTTTTG 61.139 57.895 9.64 0.00 0.00 2.44
322 323 2.140138 GTGCCAGGCCCAAGGTTTT 61.140 57.895 9.64 0.00 0.00 2.43
323 324 2.524148 GTGCCAGGCCCAAGGTTT 60.524 61.111 9.64 0.00 0.00 3.27
324 325 3.511610 AGTGCCAGGCCCAAGGTT 61.512 61.111 9.64 0.00 0.00 3.50
325 326 4.290622 CAGTGCCAGGCCCAAGGT 62.291 66.667 9.64 0.00 0.00 3.50
326 327 3.815407 AACAGTGCCAGGCCCAAGG 62.815 63.158 9.64 0.00 0.00 3.61
327 328 2.203538 AACAGTGCCAGGCCCAAG 60.204 61.111 9.64 0.00 0.00 3.61
328 329 2.521465 CAACAGTGCCAGGCCCAA 60.521 61.111 9.64 0.00 0.00 4.12
329 330 3.790416 GACAACAGTGCCAGGCCCA 62.790 63.158 9.64 0.00 0.00 5.36
330 331 2.985847 GACAACAGTGCCAGGCCC 60.986 66.667 9.64 0.00 0.00 5.80
331 332 1.391157 TTTGACAACAGTGCCAGGCC 61.391 55.000 9.64 0.00 0.00 5.19
332 333 0.031178 CTTTGACAACAGTGCCAGGC 59.969 55.000 3.66 3.66 0.00 4.85
333 334 0.670162 CCTTTGACAACAGTGCCAGG 59.330 55.000 0.00 0.00 0.00 4.45
334 335 1.605710 CTCCTTTGACAACAGTGCCAG 59.394 52.381 0.00 0.00 0.00 4.85
335 336 1.211703 TCTCCTTTGACAACAGTGCCA 59.788 47.619 0.00 0.00 0.00 4.92
336 337 1.604278 GTCTCCTTTGACAACAGTGCC 59.396 52.381 0.00 0.00 36.97 5.01
337 338 2.545946 GAGTCTCCTTTGACAACAGTGC 59.454 50.000 0.00 0.00 39.27 4.40
338 339 3.557595 GTGAGTCTCCTTTGACAACAGTG 59.442 47.826 0.00 0.00 39.27 3.66
339 340 3.432326 GGTGAGTCTCCTTTGACAACAGT 60.432 47.826 3.90 0.00 39.27 3.55
340 341 3.134458 GGTGAGTCTCCTTTGACAACAG 58.866 50.000 3.90 0.00 39.27 3.16
341 342 2.483013 CGGTGAGTCTCCTTTGACAACA 60.483 50.000 9.48 0.00 39.27 3.33
342 343 2.135933 CGGTGAGTCTCCTTTGACAAC 58.864 52.381 9.48 0.00 39.27 3.32
343 344 1.540363 GCGGTGAGTCTCCTTTGACAA 60.540 52.381 9.48 0.00 39.27 3.18
344 345 0.033504 GCGGTGAGTCTCCTTTGACA 59.966 55.000 9.48 0.00 39.27 3.58
345 346 0.033504 TGCGGTGAGTCTCCTTTGAC 59.966 55.000 9.48 0.00 37.23 3.18
361 362 3.254060 CCGATGGTAGAATAATCCTGCG 58.746 50.000 0.00 0.00 0.00 5.18
381 382 1.267806 CAACTGATCCACAACAGTGCC 59.732 52.381 0.00 0.00 44.94 5.01
385 386 4.631131 TCTGTACAACTGATCCACAACAG 58.369 43.478 0.00 0.00 39.65 3.16
500 1549 4.202305 CCCAGGATAGTTCCAGAATCTGAC 60.202 50.000 12.53 2.77 45.30 3.51
510 1559 3.434940 ACAAACACCCAGGATAGTTCC 57.565 47.619 0.00 0.00 42.96 3.62
517 1566 1.289530 AGGGAAAACAAACACCCAGGA 59.710 47.619 0.00 0.00 44.25 3.86
597 1646 3.627577 GCCCATATGTACTTGTTGGTCAG 59.372 47.826 1.24 0.00 0.00 3.51
624 1673 0.252927 AGCCCAGGAGCTTTCCTAGT 60.253 55.000 0.00 0.00 41.41 2.57
625 1674 2.614001 AGCCCAGGAGCTTTCCTAG 58.386 57.895 0.00 0.00 41.41 3.02
633 1682 3.879892 CTCAAGTATTAAAGCCCAGGAGC 59.120 47.826 0.00 0.00 0.00 4.70
634 1683 3.879892 GCTCAAGTATTAAAGCCCAGGAG 59.120 47.826 0.00 0.00 31.88 3.69
635 1684 3.681594 CGCTCAAGTATTAAAGCCCAGGA 60.682 47.826 0.00 0.00 33.82 3.86
636 1685 2.614057 CGCTCAAGTATTAAAGCCCAGG 59.386 50.000 0.00 0.00 33.82 4.45
637 1686 2.032178 GCGCTCAAGTATTAAAGCCCAG 59.968 50.000 0.00 0.00 33.82 4.45
638 1687 2.014128 GCGCTCAAGTATTAAAGCCCA 58.986 47.619 0.00 0.00 33.82 5.36
662 1711 2.027100 GCGCTAATTAGCCCCCTCTAAT 60.027 50.000 27.57 0.00 46.34 1.73
667 1716 1.430992 TTAGCGCTAATTAGCCCCCT 58.569 50.000 27.57 22.29 46.34 4.79
682 1734 3.497262 AGGCTACGTCAAACAACTTTAGC 59.503 43.478 0.00 0.00 32.06 3.09
683 1735 6.774354 TTAGGCTACGTCAAACAACTTTAG 57.226 37.500 0.00 0.00 0.00 1.85
684 1736 7.733402 AATTAGGCTACGTCAAACAACTTTA 57.267 32.000 0.00 0.00 0.00 1.85
685 1737 6.628919 AATTAGGCTACGTCAAACAACTTT 57.371 33.333 0.00 0.00 0.00 2.66
686 1738 7.443272 AGTTAATTAGGCTACGTCAAACAACTT 59.557 33.333 0.00 0.00 0.00 2.66
687 1739 6.932960 AGTTAATTAGGCTACGTCAAACAACT 59.067 34.615 0.00 0.00 0.00 3.16
688 1740 7.125536 AGTTAATTAGGCTACGTCAAACAAC 57.874 36.000 0.00 0.00 0.00 3.32
689 1741 7.733402 AAGTTAATTAGGCTACGTCAAACAA 57.267 32.000 0.00 0.00 0.00 2.83
690 1742 7.871973 TGTAAGTTAATTAGGCTACGTCAAACA 59.128 33.333 0.00 0.00 0.00 2.83
691 1743 8.243289 TGTAAGTTAATTAGGCTACGTCAAAC 57.757 34.615 0.00 0.00 0.00 2.93
692 1744 9.090692 GATGTAAGTTAATTAGGCTACGTCAAA 57.909 33.333 0.00 0.00 0.00 2.69
693 1745 8.252417 TGATGTAAGTTAATTAGGCTACGTCAA 58.748 33.333 15.46 0.00 31.72 3.18
694 1746 7.774134 TGATGTAAGTTAATTAGGCTACGTCA 58.226 34.615 14.59 14.59 32.06 4.35
695 1747 8.133627 TCTGATGTAAGTTAATTAGGCTACGTC 58.866 37.037 0.00 11.52 0.00 4.34
696 1748 7.919621 GTCTGATGTAAGTTAATTAGGCTACGT 59.080 37.037 0.00 0.00 0.00 3.57
697 1749 8.136165 AGTCTGATGTAAGTTAATTAGGCTACG 58.864 37.037 0.00 0.00 0.00 3.51
698 1750 9.465985 GAGTCTGATGTAAGTTAATTAGGCTAC 57.534 37.037 0.00 0.00 25.77 3.58
699 1751 8.639761 GGAGTCTGATGTAAGTTAATTAGGCTA 58.360 37.037 0.00 0.00 25.77 3.93
700 1752 7.419172 GGGAGTCTGATGTAAGTTAATTAGGCT 60.419 40.741 0.00 0.00 28.02 4.58
701 1753 6.706716 GGGAGTCTGATGTAAGTTAATTAGGC 59.293 42.308 0.00 0.00 0.00 3.93
702 1754 7.711339 GTGGGAGTCTGATGTAAGTTAATTAGG 59.289 40.741 0.00 0.00 0.00 2.69
703 1755 8.478877 AGTGGGAGTCTGATGTAAGTTAATTAG 58.521 37.037 0.00 0.00 0.00 1.73
704 1756 8.375493 AGTGGGAGTCTGATGTAAGTTAATTA 57.625 34.615 0.00 0.00 0.00 1.40
705 1757 7.181125 AGAGTGGGAGTCTGATGTAAGTTAATT 59.819 37.037 0.00 0.00 0.00 1.40
706 1758 6.670027 AGAGTGGGAGTCTGATGTAAGTTAAT 59.330 38.462 0.00 0.00 0.00 1.40
707 1759 6.017192 AGAGTGGGAGTCTGATGTAAGTTAA 58.983 40.000 0.00 0.00 0.00 2.01
708 1760 5.419155 CAGAGTGGGAGTCTGATGTAAGTTA 59.581 44.000 2.73 0.00 46.12 2.24
709 1761 4.221703 CAGAGTGGGAGTCTGATGTAAGTT 59.778 45.833 2.73 0.00 46.12 2.66
710 1762 3.766591 CAGAGTGGGAGTCTGATGTAAGT 59.233 47.826 2.73 0.00 46.12 2.24
711 1763 4.019858 TCAGAGTGGGAGTCTGATGTAAG 58.980 47.826 6.98 0.00 46.57 2.34
712 1764 4.047627 TCAGAGTGGGAGTCTGATGTAA 57.952 45.455 6.98 0.00 46.57 2.41
713 1765 3.739401 TCAGAGTGGGAGTCTGATGTA 57.261 47.619 6.98 0.00 46.57 2.29
714 1766 2.612285 TCAGAGTGGGAGTCTGATGT 57.388 50.000 6.98 0.00 46.57 3.06
718 1770 3.397482 CACTTTTCAGAGTGGGAGTCTG 58.603 50.000 2.49 2.49 44.93 3.51
719 1771 3.760580 CACTTTTCAGAGTGGGAGTCT 57.239 47.619 0.00 0.00 42.58 3.24
726 1778 4.260620 CGTAACCAACCACTTTTCAGAGTG 60.261 45.833 0.00 0.00 45.19 3.51
727 1779 3.875134 CGTAACCAACCACTTTTCAGAGT 59.125 43.478 0.00 0.00 0.00 3.24
728 1780 3.250040 CCGTAACCAACCACTTTTCAGAG 59.750 47.826 0.00 0.00 0.00 3.35
729 1781 3.207778 CCGTAACCAACCACTTTTCAGA 58.792 45.455 0.00 0.00 0.00 3.27
730 1782 2.946990 ACCGTAACCAACCACTTTTCAG 59.053 45.455 0.00 0.00 0.00 3.02
731 1783 3.002038 ACCGTAACCAACCACTTTTCA 57.998 42.857 0.00 0.00 0.00 2.69
732 1784 4.353737 GAAACCGTAACCAACCACTTTTC 58.646 43.478 0.00 0.00 0.00 2.29
733 1785 3.181498 CGAAACCGTAACCAACCACTTTT 60.181 43.478 0.00 0.00 0.00 2.27
734 1786 2.355444 CGAAACCGTAACCAACCACTTT 59.645 45.455 0.00 0.00 0.00 2.66
735 1787 1.941975 CGAAACCGTAACCAACCACTT 59.058 47.619 0.00 0.00 0.00 3.16
736 1788 1.585297 CGAAACCGTAACCAACCACT 58.415 50.000 0.00 0.00 0.00 4.00
737 1789 0.587768 CCGAAACCGTAACCAACCAC 59.412 55.000 0.00 0.00 0.00 4.16
738 1790 1.165284 GCCGAAACCGTAACCAACCA 61.165 55.000 0.00 0.00 0.00 3.67
739 1791 1.165284 TGCCGAAACCGTAACCAACC 61.165 55.000 0.00 0.00 0.00 3.77
740 1792 0.876399 ATGCCGAAACCGTAACCAAC 59.124 50.000 0.00 0.00 0.00 3.77
741 1793 1.158434 GATGCCGAAACCGTAACCAA 58.842 50.000 0.00 0.00 0.00 3.67
742 1794 0.035036 TGATGCCGAAACCGTAACCA 59.965 50.000 0.00 0.00 0.00 3.67
743 1795 1.129811 CTTGATGCCGAAACCGTAACC 59.870 52.381 0.00 0.00 0.00 2.85
744 1796 1.802365 ACTTGATGCCGAAACCGTAAC 59.198 47.619 0.00 0.00 0.00 2.50
745 1797 2.172851 ACTTGATGCCGAAACCGTAA 57.827 45.000 0.00 0.00 0.00 3.18
746 1798 2.231964 ACTACTTGATGCCGAAACCGTA 59.768 45.455 0.00 0.00 0.00 4.02
747 1799 1.001633 ACTACTTGATGCCGAAACCGT 59.998 47.619 0.00 0.00 0.00 4.83
748 1800 1.659098 GACTACTTGATGCCGAAACCG 59.341 52.381 0.00 0.00 0.00 4.44
749 1801 2.695359 TGACTACTTGATGCCGAAACC 58.305 47.619 0.00 0.00 0.00 3.27
750 1802 4.451096 TCTTTGACTACTTGATGCCGAAAC 59.549 41.667 0.00 0.00 0.00 2.78
751 1803 4.637276 TCTTTGACTACTTGATGCCGAAA 58.363 39.130 0.00 0.00 0.00 3.46
752 1804 4.265904 TCTTTGACTACTTGATGCCGAA 57.734 40.909 0.00 0.00 0.00 4.30
753 1805 3.953712 TCTTTGACTACTTGATGCCGA 57.046 42.857 0.00 0.00 0.00 5.54
754 1806 4.092091 GTCTTCTTTGACTACTTGATGCCG 59.908 45.833 0.00 0.00 34.39 5.69
755 1807 4.997395 TGTCTTCTTTGACTACTTGATGCC 59.003 41.667 0.00 0.00 37.79 4.40
756 1808 5.698545 ACTGTCTTCTTTGACTACTTGATGC 59.301 40.000 0.00 0.00 37.79 3.91
757 1809 7.867909 TGTACTGTCTTCTTTGACTACTTGATG 59.132 37.037 0.00 0.00 37.79 3.07
758 1810 7.952671 TGTACTGTCTTCTTTGACTACTTGAT 58.047 34.615 0.00 0.00 37.79 2.57
759 1811 7.342769 TGTACTGTCTTCTTTGACTACTTGA 57.657 36.000 0.00 0.00 37.79 3.02
760 1812 8.420374 TTTGTACTGTCTTCTTTGACTACTTG 57.580 34.615 0.00 0.00 37.79 3.16
761 1813 9.614792 ATTTTGTACTGTCTTCTTTGACTACTT 57.385 29.630 0.00 0.00 37.79 2.24
762 1814 9.614792 AATTTTGTACTGTCTTCTTTGACTACT 57.385 29.630 0.00 0.00 37.79 2.57
770 1822 9.232473 GGGAAGATAATTTTGTACTGTCTTCTT 57.768 33.333 14.15 6.29 39.76 2.52
771 1823 7.829706 GGGGAAGATAATTTTGTACTGTCTTCT 59.170 37.037 14.15 0.00 39.76 2.85
772 1824 7.829706 AGGGGAAGATAATTTTGTACTGTCTTC 59.170 37.037 8.95 8.95 39.36 2.87
773 1825 7.699878 AGGGGAAGATAATTTTGTACTGTCTT 58.300 34.615 0.00 0.00 0.00 3.01
774 1826 7.272144 AGGGGAAGATAATTTTGTACTGTCT 57.728 36.000 0.00 0.00 0.00 3.41
775 1827 7.715686 CCTAGGGGAAGATAATTTTGTACTGTC 59.284 40.741 0.00 0.00 33.58 3.51
776 1828 7.574607 CCTAGGGGAAGATAATTTTGTACTGT 58.425 38.462 0.00 0.00 33.58 3.55
777 1829 6.486993 GCCTAGGGGAAGATAATTTTGTACTG 59.513 42.308 11.72 0.00 33.58 2.74
778 1830 6.602278 GCCTAGGGGAAGATAATTTTGTACT 58.398 40.000 11.72 0.00 33.58 2.73
779 1831 5.469084 CGCCTAGGGGAAGATAATTTTGTAC 59.531 44.000 20.99 0.00 33.58 2.90
780 1832 5.367352 TCGCCTAGGGGAAGATAATTTTGTA 59.633 40.000 25.28 0.00 34.11 2.41
781 1833 4.165372 TCGCCTAGGGGAAGATAATTTTGT 59.835 41.667 25.28 0.00 34.11 2.83
782 1834 4.714632 TCGCCTAGGGGAAGATAATTTTG 58.285 43.478 25.28 0.00 34.11 2.44
783 1835 5.382664 TTCGCCTAGGGGAAGATAATTTT 57.617 39.130 31.53 0.00 41.15 1.82
784 1836 5.382664 TTTCGCCTAGGGGAAGATAATTT 57.617 39.130 32.52 0.00 45.39 1.82
785 1837 5.382664 TTTTCGCCTAGGGGAAGATAATT 57.617 39.130 32.52 0.00 45.39 1.40
786 1838 5.131067 GTTTTTCGCCTAGGGGAAGATAAT 58.869 41.667 32.52 0.00 45.39 1.28
787 1839 4.520179 GTTTTTCGCCTAGGGGAAGATAA 58.480 43.478 32.52 24.24 45.39 1.75
788 1840 3.118149 GGTTTTTCGCCTAGGGGAAGATA 60.118 47.826 32.52 20.58 45.39 1.98
789 1841 2.356844 GGTTTTTCGCCTAGGGGAAGAT 60.357 50.000 32.52 0.00 45.39 2.40
855 1907 2.034221 GGGTGAGAAAAGCGGCCT 59.966 61.111 0.00 0.00 0.00 5.19
1331 2394 0.180642 CATGATCACAGCCTGCTCCT 59.819 55.000 0.00 0.00 0.00 3.69
1610 2674 7.201652 GCTTCTCATATTTCACTTGGTACTTCC 60.202 40.741 0.00 0.00 0.00 3.46
1724 2789 1.969923 CAGCAAACAGAAAATCCCCCA 59.030 47.619 0.00 0.00 0.00 4.96
1917 2985 0.760567 CCTGAGATCCATCACCCGGA 60.761 60.000 0.73 0.00 36.84 5.14
1978 3046 4.140663 AGCTATAACAGGAGGGACTACCAT 60.141 45.833 0.00 0.00 43.28 3.55
2287 3355 7.287696 TGTCTATGTATCCACACATGTATCTGT 59.712 37.037 0.00 0.00 39.46 3.41
2613 3682 4.597004 ACAGACACTTTCGGAGATACCTA 58.403 43.478 0.00 0.00 35.04 3.08


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.