Multiple sequence alignment - TraesCS5D01G026300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G026300 chr5D 100.000 2522 0 0 1 2522 23862569 23865090 0.000000e+00 4658
1 TraesCS5D01G026300 chr5D 92.988 1797 77 27 431 2192 525378002 525379784 0.000000e+00 2575
2 TraesCS5D01G026300 chr5D 87.277 841 65 10 708 1522 525325403 525326227 0.000000e+00 922
3 TraesCS5D01G026300 chr5D 86.695 699 78 7 882 1579 525321753 525322437 0.000000e+00 761
4 TraesCS5D01G026300 chr5D 94.608 408 18 3 1 406 525324704 525325109 1.650000e-176 628
5 TraesCS5D01G026300 chr5D 78.596 883 124 28 701 1564 525305671 525306507 7.990000e-145 523
6 TraesCS5D01G026300 chr5D 85.240 542 38 21 391 899 525321201 525321733 1.030000e-143 520
7 TraesCS5D01G026300 chr5D 80.944 572 64 25 1001 1544 525243283 525242729 6.490000e-111 411
8 TraesCS5D01G026300 chr5D 82.485 491 58 17 1672 2157 525322715 525323182 3.020000e-109 405
9 TraesCS5D01G026300 chr5D 96.517 201 7 0 462 662 525325205 525325405 1.450000e-87 333
10 TraesCS5D01G026300 chr5B 87.978 1281 119 21 325 1579 659738842 659740113 0.000000e+00 1480
11 TraesCS5D01G026300 chr5B 87.184 1108 99 16 464 1538 659743054 659744151 0.000000e+00 1219
12 TraesCS5D01G026300 chr5B 85.139 323 34 10 1872 2192 659744410 659744720 4.050000e-83 318
13 TraesCS5D01G026300 chr5B 90.173 173 17 0 1 173 659741666 659741838 2.520000e-55 226
14 TraesCS5D01G026300 chr5B 88.119 101 12 0 585 685 659704089 659704189 1.230000e-23 121
15 TraesCS5D01G026300 chr5A 84.071 678 81 8 926 1594 651788265 651788924 1.650000e-176 628
16 TraesCS5D01G026300 chr5A 79.125 1006 131 45 574 1550 651733878 651734833 2.760000e-174 621
17 TraesCS5D01G026300 chr5A 85.270 611 65 11 939 1539 651748934 651749529 7.720000e-170 606
18 TraesCS5D01G026300 chr5A 81.193 654 53 28 271 889 651785461 651786079 1.770000e-126 462
19 TraesCS5D01G026300 chr5A 81.967 244 25 6 1369 1605 651638898 651639129 3.310000e-44 189
20 TraesCS5D01G026300 chr5A 79.710 276 24 15 574 831 651637664 651637925 1.200000e-38 171
21 TraesCS5D01G026300 chr5A 90.217 92 9 0 585 676 651758618 651758709 1.230000e-23 121
22 TraesCS5D01G026300 chr4D 98.182 330 6 0 2193 2522 497935224 497934895 6.050000e-161 577
23 TraesCS5D01G026300 chr4D 97.879 330 7 0 2193 2522 125093175 125092846 2.810000e-159 571
24 TraesCS5D01G026300 chr4D 97.576 330 8 0 2193 2522 483374716 483375045 1.310000e-157 566
25 TraesCS5D01G026300 chr4D 97.273 330 9 0 2193 2522 484882267 484881938 6.090000e-156 560
26 TraesCS5D01G026300 chr7D 97.879 330 6 1 2193 2522 33455497 33455825 1.010000e-158 569
27 TraesCS5D01G026300 chr7D 84.653 202 26 5 130 330 174668733 174668930 1.980000e-46 196
28 TraesCS5D01G026300 chr3D 97.576 330 8 0 2193 2522 550926895 550926566 1.310000e-157 566
29 TraesCS5D01G026300 chr2D 97.576 330 8 0 2193 2522 619806040 619805711 1.310000e-157 566
30 TraesCS5D01G026300 chr1D 97.576 330 8 0 2193 2522 40361372 40361701 1.310000e-157 566
31 TraesCS5D01G026300 chr6D 97.568 329 8 0 2194 2522 80046525 80046197 4.710000e-157 564
32 TraesCS5D01G026300 chr6B 83.556 225 28 5 19 241 63153538 63153321 4.250000e-48 202
33 TraesCS5D01G026300 chr6B 82.301 226 31 7 18 241 63209220 63209002 1.190000e-43 187
34 TraesCS5D01G026300 chr6B 82.301 226 31 7 18 241 63239740 63239522 1.190000e-43 187
35 TraesCS5D01G026300 chrUn 82.301 226 31 7 18 241 364562794 364563012 1.190000e-43 187


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G026300 chr5D 23862569 23865090 2521 False 4658.000000 4658 100.000000 1 2522 1 chr5D.!!$F1 2521
1 TraesCS5D01G026300 chr5D 525378002 525379784 1782 False 2575.000000 2575 92.988000 431 2192 1 chr5D.!!$F3 1761
2 TraesCS5D01G026300 chr5D 525321201 525326227 5026 False 594.833333 922 88.803667 1 2157 6 chr5D.!!$F4 2156
3 TraesCS5D01G026300 chr5D 525305671 525306507 836 False 523.000000 523 78.596000 701 1564 1 chr5D.!!$F2 863
4 TraesCS5D01G026300 chr5D 525242729 525243283 554 True 411.000000 411 80.944000 1001 1544 1 chr5D.!!$R1 543
5 TraesCS5D01G026300 chr5B 659738842 659744720 5878 False 810.750000 1480 87.618500 1 2192 4 chr5B.!!$F2 2191
6 TraesCS5D01G026300 chr5A 651733878 651734833 955 False 621.000000 621 79.125000 574 1550 1 chr5A.!!$F1 976
7 TraesCS5D01G026300 chr5A 651748934 651749529 595 False 606.000000 606 85.270000 939 1539 1 chr5A.!!$F2 600
8 TraesCS5D01G026300 chr5A 651785461 651788924 3463 False 545.000000 628 82.632000 271 1594 2 chr5A.!!$F5 1323

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
81 82 0.171231 CGATGGTTGAGAGACAGCGA 59.829 55.0 0.0 0.0 45.68 4.93 F
137 138 0.249447 TCACACAAGACTCTGCCACG 60.249 55.0 0.0 0.0 0.00 4.94 F
1314 7662 0.035439 GGGTCATCAAGGAGCGGAAA 60.035 55.0 0.0 0.0 36.17 3.13 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1314 7662 0.182299 GCTGCCTATCCTCTTGCCTT 59.818 55.000 0.0 0.0 0.0 4.35 R
1333 7681 1.080501 AGATGTGACAGTCGTGCCG 60.081 57.895 0.0 0.0 0.0 5.69 R
2440 12729 0.033504 GGACTGAACTCTGACCGCAA 59.966 55.000 0.0 0.0 0.0 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 6.971726 CTATACCCCTGTATAGTGTCACAA 57.028 41.667 5.62 0.00 46.32 3.33
27 28 7.540474 CTATACCCCTGTATAGTGTCACAAT 57.460 40.000 5.62 0.00 46.32 2.71
28 29 8.645814 CTATACCCCTGTATAGTGTCACAATA 57.354 38.462 5.62 0.00 46.32 1.90
29 30 7.924358 ATACCCCTGTATAGTGTCACAATAA 57.076 36.000 5.62 0.00 35.89 1.40
30 31 5.985911 ACCCCTGTATAGTGTCACAATAAC 58.014 41.667 5.62 0.00 0.00 1.89
31 32 5.724854 ACCCCTGTATAGTGTCACAATAACT 59.275 40.000 5.62 0.00 0.00 2.24
32 33 6.214819 ACCCCTGTATAGTGTCACAATAACTT 59.785 38.462 5.62 0.00 0.00 2.66
33 34 7.110155 CCCCTGTATAGTGTCACAATAACTTT 58.890 38.462 5.62 0.00 0.00 2.66
34 35 7.065803 CCCCTGTATAGTGTCACAATAACTTTG 59.934 40.741 5.62 0.00 0.00 2.77
35 36 7.822334 CCCTGTATAGTGTCACAATAACTTTGA 59.178 37.037 5.62 0.00 0.00 2.69
36 37 9.214957 CCTGTATAGTGTCACAATAACTTTGAA 57.785 33.333 5.62 0.00 0.00 2.69
43 44 8.454106 AGTGTCACAATAACTTTGAATATCAGC 58.546 33.333 5.62 0.00 0.00 4.26
44 45 7.698130 GTGTCACAATAACTTTGAATATCAGCC 59.302 37.037 0.00 0.00 0.00 4.85
45 46 6.907212 GTCACAATAACTTTGAATATCAGCCG 59.093 38.462 0.00 0.00 0.00 5.52
46 47 6.597672 TCACAATAACTTTGAATATCAGCCGT 59.402 34.615 0.00 0.00 0.00 5.68
47 48 7.120579 TCACAATAACTTTGAATATCAGCCGTT 59.879 33.333 0.00 0.00 0.00 4.44
48 49 7.218773 CACAATAACTTTGAATATCAGCCGTTG 59.781 37.037 0.00 0.00 0.00 4.10
49 50 4.701956 AACTTTGAATATCAGCCGTTGG 57.298 40.909 0.00 0.00 0.00 3.77
50 51 3.016736 ACTTTGAATATCAGCCGTTGGG 58.983 45.455 0.00 0.00 0.00 4.12
51 52 2.799126 TTGAATATCAGCCGTTGGGT 57.201 45.000 0.00 0.00 34.97 4.51
52 53 3.916359 TTGAATATCAGCCGTTGGGTA 57.084 42.857 0.00 0.00 34.97 3.69
53 54 4.431416 TTGAATATCAGCCGTTGGGTAT 57.569 40.909 0.00 0.00 34.97 2.73
54 55 3.738982 TGAATATCAGCCGTTGGGTATG 58.261 45.455 0.00 0.00 34.97 2.39
55 56 2.185004 ATATCAGCCGTTGGGTATGC 57.815 50.000 0.00 0.00 34.97 3.14
56 57 1.128200 TATCAGCCGTTGGGTATGCT 58.872 50.000 0.00 0.00 34.97 3.79
57 58 0.179045 ATCAGCCGTTGGGTATGCTC 60.179 55.000 0.00 0.00 34.97 4.26
58 59 1.819632 CAGCCGTTGGGTATGCTCC 60.820 63.158 0.00 0.00 34.97 4.70
59 60 2.270850 GCCGTTGGGTATGCTCCA 59.729 61.111 0.00 0.00 34.97 3.86
60 61 1.152963 GCCGTTGGGTATGCTCCAT 60.153 57.895 0.00 0.00 33.82 3.41
61 62 1.166531 GCCGTTGGGTATGCTCCATC 61.167 60.000 0.00 0.00 33.82 3.51
62 63 0.535102 CCGTTGGGTATGCTCCATCC 60.535 60.000 0.00 0.00 33.82 3.51
63 64 0.880278 CGTTGGGTATGCTCCATCCG 60.880 60.000 0.00 0.00 33.82 4.18
64 65 0.468226 GTTGGGTATGCTCCATCCGA 59.532 55.000 0.00 0.00 33.82 4.55
65 66 1.072331 GTTGGGTATGCTCCATCCGAT 59.928 52.381 0.00 0.00 33.82 4.18
66 67 0.686789 TGGGTATGCTCCATCCGATG 59.313 55.000 0.93 0.93 0.00 3.84
76 77 2.231215 CCATCCGATGGTTGAGAGAC 57.769 55.000 18.13 0.00 45.54 3.36
77 78 1.482182 CCATCCGATGGTTGAGAGACA 59.518 52.381 18.13 0.00 45.54 3.41
78 79 2.482664 CCATCCGATGGTTGAGAGACAG 60.483 54.545 18.13 0.00 45.54 3.51
79 80 0.532573 TCCGATGGTTGAGAGACAGC 59.467 55.000 0.00 0.00 0.00 4.40
80 81 0.803768 CCGATGGTTGAGAGACAGCG 60.804 60.000 0.00 0.00 42.87 5.18
81 82 0.171231 CGATGGTTGAGAGACAGCGA 59.829 55.000 0.00 0.00 45.68 4.93
82 83 1.402852 CGATGGTTGAGAGACAGCGAA 60.403 52.381 0.00 0.00 45.68 4.70
83 84 2.736719 CGATGGTTGAGAGACAGCGAAT 60.737 50.000 0.00 0.00 45.68 3.34
84 85 2.370281 TGGTTGAGAGACAGCGAATC 57.630 50.000 0.00 0.00 0.00 2.52
85 86 1.066858 TGGTTGAGAGACAGCGAATCC 60.067 52.381 0.00 0.00 0.00 3.01
86 87 1.066858 GGTTGAGAGACAGCGAATCCA 60.067 52.381 0.00 0.00 0.00 3.41
87 88 2.612972 GGTTGAGAGACAGCGAATCCAA 60.613 50.000 0.00 0.00 0.00 3.53
88 89 3.067106 GTTGAGAGACAGCGAATCCAAA 58.933 45.455 0.00 0.00 0.00 3.28
89 90 2.688507 TGAGAGACAGCGAATCCAAAC 58.311 47.619 0.00 0.00 0.00 2.93
90 91 2.037121 TGAGAGACAGCGAATCCAAACA 59.963 45.455 0.00 0.00 0.00 2.83
91 92 3.067106 GAGAGACAGCGAATCCAAACAA 58.933 45.455 0.00 0.00 0.00 2.83
92 93 3.476552 AGAGACAGCGAATCCAAACAAA 58.523 40.909 0.00 0.00 0.00 2.83
93 94 4.074970 AGAGACAGCGAATCCAAACAAAT 58.925 39.130 0.00 0.00 0.00 2.32
94 95 5.245531 AGAGACAGCGAATCCAAACAAATA 58.754 37.500 0.00 0.00 0.00 1.40
95 96 5.882557 AGAGACAGCGAATCCAAACAAATAT 59.117 36.000 0.00 0.00 0.00 1.28
96 97 6.037610 AGAGACAGCGAATCCAAACAAATATC 59.962 38.462 0.00 0.00 0.00 1.63
97 98 5.647658 AGACAGCGAATCCAAACAAATATCA 59.352 36.000 0.00 0.00 0.00 2.15
98 99 6.319658 AGACAGCGAATCCAAACAAATATCAT 59.680 34.615 0.00 0.00 0.00 2.45
99 100 6.498304 ACAGCGAATCCAAACAAATATCATC 58.502 36.000 0.00 0.00 0.00 2.92
100 101 5.916883 CAGCGAATCCAAACAAATATCATCC 59.083 40.000 0.00 0.00 0.00 3.51
101 102 4.911610 GCGAATCCAAACAAATATCATCCG 59.088 41.667 0.00 0.00 0.00 4.18
102 103 4.911610 CGAATCCAAACAAATATCATCCGC 59.088 41.667 0.00 0.00 0.00 5.54
103 104 5.277974 CGAATCCAAACAAATATCATCCGCT 60.278 40.000 0.00 0.00 0.00 5.52
104 105 4.898829 TCCAAACAAATATCATCCGCTG 57.101 40.909 0.00 0.00 0.00 5.18
105 106 4.269183 TCCAAACAAATATCATCCGCTGT 58.731 39.130 0.00 0.00 0.00 4.40
106 107 5.432645 TCCAAACAAATATCATCCGCTGTA 58.567 37.500 0.00 0.00 0.00 2.74
107 108 6.061441 TCCAAACAAATATCATCCGCTGTAT 58.939 36.000 0.00 0.00 0.00 2.29
108 109 7.220740 TCCAAACAAATATCATCCGCTGTATA 58.779 34.615 0.00 0.00 0.00 1.47
109 110 7.717436 TCCAAACAAATATCATCCGCTGTATAA 59.283 33.333 0.00 0.00 0.00 0.98
110 111 8.349245 CCAAACAAATATCATCCGCTGTATAAA 58.651 33.333 0.00 0.00 0.00 1.40
111 112 9.897744 CAAACAAATATCATCCGCTGTATAAAT 57.102 29.630 0.00 0.00 0.00 1.40
120 121 8.219546 TCATCCGCTGTATAAATTTTTCATCA 57.780 30.769 0.00 0.00 0.00 3.07
121 122 8.128582 TCATCCGCTGTATAAATTTTTCATCAC 58.871 33.333 0.00 0.00 0.00 3.06
122 123 7.384439 TCCGCTGTATAAATTTTTCATCACA 57.616 32.000 0.00 0.00 0.00 3.58
123 124 7.247728 TCCGCTGTATAAATTTTTCATCACAC 58.752 34.615 0.00 0.00 0.00 3.82
124 125 7.026562 CCGCTGTATAAATTTTTCATCACACA 58.973 34.615 0.00 0.00 0.00 3.72
125 126 7.540400 CCGCTGTATAAATTTTTCATCACACAA 59.460 33.333 0.00 0.00 0.00 3.33
126 127 8.577939 CGCTGTATAAATTTTTCATCACACAAG 58.422 33.333 0.00 0.00 0.00 3.16
127 128 9.624697 GCTGTATAAATTTTTCATCACACAAGA 57.375 29.630 0.00 0.00 0.00 3.02
132 133 9.903682 ATAAATTTTTCATCACACAAGACTCTG 57.096 29.630 0.00 0.00 0.00 3.35
133 134 4.818534 TTTTCATCACACAAGACTCTGC 57.181 40.909 0.00 0.00 0.00 4.26
134 135 2.462456 TCATCACACAAGACTCTGCC 57.538 50.000 0.00 0.00 0.00 4.85
135 136 1.693606 TCATCACACAAGACTCTGCCA 59.306 47.619 0.00 0.00 0.00 4.92
136 137 1.802960 CATCACACAAGACTCTGCCAC 59.197 52.381 0.00 0.00 0.00 5.01
137 138 0.249447 TCACACAAGACTCTGCCACG 60.249 55.000 0.00 0.00 0.00 4.94
138 139 0.530650 CACACAAGACTCTGCCACGT 60.531 55.000 0.00 0.00 0.00 4.49
139 140 0.530650 ACACAAGACTCTGCCACGTG 60.531 55.000 9.08 9.08 0.00 4.49
140 141 1.069765 ACAAGACTCTGCCACGTGG 59.930 57.895 30.66 30.66 38.53 4.94
153 154 3.651803 CCACGTGGCCTTTTAATTGAA 57.348 42.857 24.02 0.00 0.00 2.69
154 155 4.186856 CCACGTGGCCTTTTAATTGAAT 57.813 40.909 24.02 0.00 0.00 2.57
155 156 4.173256 CCACGTGGCCTTTTAATTGAATC 58.827 43.478 24.02 0.00 0.00 2.52
156 157 4.173256 CACGTGGCCTTTTAATTGAATCC 58.827 43.478 7.95 0.00 0.00 3.01
157 158 3.194755 ACGTGGCCTTTTAATTGAATCCC 59.805 43.478 3.32 0.00 0.00 3.85
158 159 3.430236 CGTGGCCTTTTAATTGAATCCCC 60.430 47.826 3.32 0.00 0.00 4.81
159 160 3.517500 GTGGCCTTTTAATTGAATCCCCA 59.482 43.478 3.32 0.00 0.00 4.96
160 161 3.517500 TGGCCTTTTAATTGAATCCCCAC 59.482 43.478 3.32 0.00 0.00 4.61
161 162 3.774766 GGCCTTTTAATTGAATCCCCACT 59.225 43.478 0.00 0.00 0.00 4.00
162 163 4.959839 GGCCTTTTAATTGAATCCCCACTA 59.040 41.667 0.00 0.00 0.00 2.74
163 164 5.602561 GGCCTTTTAATTGAATCCCCACTAT 59.397 40.000 0.00 0.00 0.00 2.12
164 165 6.099701 GGCCTTTTAATTGAATCCCCACTATT 59.900 38.462 0.00 0.00 0.00 1.73
165 166 6.986231 GCCTTTTAATTGAATCCCCACTATTG 59.014 38.462 0.00 0.00 0.00 1.90
166 167 7.364673 GCCTTTTAATTGAATCCCCACTATTGT 60.365 37.037 0.00 0.00 0.00 2.71
167 168 8.197439 CCTTTTAATTGAATCCCCACTATTGTC 58.803 37.037 0.00 0.00 0.00 3.18
168 169 8.893563 TTTTAATTGAATCCCCACTATTGTCT 57.106 30.769 0.00 0.00 0.00 3.41
169 170 8.519799 TTTAATTGAATCCCCACTATTGTCTC 57.480 34.615 0.00 0.00 0.00 3.36
170 171 5.715439 ATTGAATCCCCACTATTGTCTCA 57.285 39.130 0.00 0.00 0.00 3.27
171 172 5.715439 TTGAATCCCCACTATTGTCTCAT 57.285 39.130 0.00 0.00 0.00 2.90
172 173 6.823286 TTGAATCCCCACTATTGTCTCATA 57.177 37.500 0.00 0.00 0.00 2.15
173 174 7.392766 TTGAATCCCCACTATTGTCTCATAT 57.607 36.000 0.00 0.00 0.00 1.78
174 175 7.392766 TGAATCCCCACTATTGTCTCATATT 57.607 36.000 0.00 0.00 0.00 1.28
175 176 8.504811 TGAATCCCCACTATTGTCTCATATTA 57.495 34.615 0.00 0.00 0.00 0.98
176 177 9.116080 TGAATCCCCACTATTGTCTCATATTAT 57.884 33.333 0.00 0.00 0.00 1.28
177 178 9.965902 GAATCCCCACTATTGTCTCATATTATT 57.034 33.333 0.00 0.00 0.00 1.40
178 179 9.965902 AATCCCCACTATTGTCTCATATTATTC 57.034 33.333 0.00 0.00 0.00 1.75
179 180 8.742125 TCCCCACTATTGTCTCATATTATTCT 57.258 34.615 0.00 0.00 0.00 2.40
180 181 9.837681 TCCCCACTATTGTCTCATATTATTCTA 57.162 33.333 0.00 0.00 0.00 2.10
210 211 9.703892 ATATCTTCTTTCGATACCAAGAATCTG 57.296 33.333 9.76 1.17 38.15 2.90
211 212 7.170393 TCTTCTTTCGATACCAAGAATCTGA 57.830 36.000 9.76 3.14 38.15 3.27
212 213 7.786030 TCTTCTTTCGATACCAAGAATCTGAT 58.214 34.615 9.76 0.00 38.15 2.90
213 214 8.260818 TCTTCTTTCGATACCAAGAATCTGATT 58.739 33.333 9.76 1.81 38.15 2.57
214 215 8.425577 TTCTTTCGATACCAAGAATCTGATTC 57.574 34.615 20.14 20.14 34.71 2.52
261 262 9.921637 GAACAATCTAGATTCTATAGAGTTGGG 57.078 37.037 15.24 2.45 32.96 4.12
262 263 9.661954 AACAATCTAGATTCTATAGAGTTGGGA 57.338 33.333 15.24 1.62 32.96 4.37
263 264 9.084533 ACAATCTAGATTCTATAGAGTTGGGAC 57.915 37.037 15.24 0.00 32.96 4.46
264 265 8.527810 CAATCTAGATTCTATAGAGTTGGGACC 58.472 40.741 15.24 0.00 32.96 4.46
265 266 7.409408 TCTAGATTCTATAGAGTTGGGACCT 57.591 40.000 2.02 0.00 0.00 3.85
266 267 7.235079 TCTAGATTCTATAGAGTTGGGACCTG 58.765 42.308 2.02 0.00 0.00 4.00
267 268 6.031964 AGATTCTATAGAGTTGGGACCTGA 57.968 41.667 2.02 0.00 0.00 3.86
268 269 5.836358 AGATTCTATAGAGTTGGGACCTGAC 59.164 44.000 2.02 0.00 0.00 3.51
269 270 4.883021 TCTATAGAGTTGGGACCTGACT 57.117 45.455 0.00 0.00 0.00 3.41
270 271 5.988865 TCTATAGAGTTGGGACCTGACTA 57.011 43.478 0.00 0.00 0.00 2.59
271 272 5.942961 TCTATAGAGTTGGGACCTGACTAG 58.057 45.833 0.00 0.00 0.00 2.57
272 273 4.611564 ATAGAGTTGGGACCTGACTAGT 57.388 45.455 0.00 0.00 0.00 2.57
273 274 5.728937 ATAGAGTTGGGACCTGACTAGTA 57.271 43.478 0.00 0.00 0.00 1.82
274 275 4.611564 AGAGTTGGGACCTGACTAGTAT 57.388 45.455 0.00 0.00 0.00 2.12
275 276 5.728937 AGAGTTGGGACCTGACTAGTATA 57.271 43.478 0.00 0.00 0.00 1.47
276 277 6.088541 AGAGTTGGGACCTGACTAGTATAA 57.911 41.667 0.00 0.00 0.00 0.98
283 284 8.792830 TGGGACCTGACTAGTATAATTTGTAT 57.207 34.615 0.00 0.00 0.00 2.29
320 321 0.383231 CGAGAATGCATTTCCCCTGC 59.617 55.000 14.33 0.00 40.10 4.85
321 322 1.772836 GAGAATGCATTTCCCCTGCT 58.227 50.000 14.33 3.70 40.34 4.24
322 323 2.746142 CGAGAATGCATTTCCCCTGCTA 60.746 50.000 14.33 0.00 40.34 3.49
323 324 3.494332 GAGAATGCATTTCCCCTGCTAT 58.506 45.455 14.33 0.00 40.34 2.97
324 325 3.893813 GAGAATGCATTTCCCCTGCTATT 59.106 43.478 14.33 0.00 40.34 1.73
325 326 5.065613 AGAATGCATTTCCCCTGCTATTA 57.934 39.130 14.33 0.00 40.34 0.98
375 385 5.750067 AGCACGTATAATTAAACAGTACCGG 59.250 40.000 0.00 0.00 0.00 5.28
376 386 5.748152 GCACGTATAATTAAACAGTACCGGA 59.252 40.000 9.46 0.00 0.00 5.14
411 426 1.810031 GCTAGAGCACACACCACACAA 60.810 52.381 0.00 0.00 41.59 3.33
419 436 2.352651 CACACACCACACAAGTCTCAAG 59.647 50.000 0.00 0.00 0.00 3.02
458 477 4.149046 GCGATCGAAGATCTTTCCACATAC 59.851 45.833 21.57 0.00 45.12 2.39
459 478 5.524284 CGATCGAAGATCTTTCCACATACT 58.476 41.667 10.26 0.00 45.12 2.12
461 480 5.263968 TCGAAGATCTTTCCACATACTCC 57.736 43.478 9.87 0.00 0.00 3.85
462 481 4.956700 TCGAAGATCTTTCCACATACTCCT 59.043 41.667 9.87 0.00 0.00 3.69
463 482 6.127101 TCGAAGATCTTTCCACATACTCCTA 58.873 40.000 9.87 0.00 0.00 2.94
476 495 6.183360 CCACATACTCCTATAGAACGTTCCAA 60.183 42.308 24.22 13.63 0.00 3.53
528 553 1.004918 CCGTCCAACTCCAGTGTCC 60.005 63.158 0.00 0.00 0.00 4.02
553 578 8.859156 CCGGATTAAATTAATGGATTAATTGCG 58.141 33.333 15.03 11.10 46.55 4.85
662 4785 3.864686 TCGACCGCGCTACGTACC 61.865 66.667 5.56 0.00 41.42 3.34
701 4824 7.171508 CAGTCGAGCTATCTGCCAAAATAATAA 59.828 37.037 0.00 0.00 44.23 1.40
702 4825 7.880195 AGTCGAGCTATCTGCCAAAATAATAAT 59.120 33.333 0.00 0.00 44.23 1.28
968 7300 6.072452 ACAGAGCATCGATCGAATTACAGATA 60.072 38.462 23.50 0.00 42.67 1.98
969 7301 6.971756 CAGAGCATCGATCGAATTACAGATAT 59.028 38.462 23.50 0.00 42.67 1.63
982 7321 7.463780 CGAATTACAGATATCAGCGGATCATTG 60.464 40.741 1.48 3.03 34.89 2.82
989 7328 3.548745 TCAGCGGATCATTGAGACAAT 57.451 42.857 0.00 0.00 0.00 2.71
997 7336 5.338365 GGATCATTGAGACAATCAGCAAAC 58.662 41.667 0.00 0.00 39.68 2.93
1039 7384 3.854669 CGAGGGAGGAGGCGCAAT 61.855 66.667 10.83 0.00 0.00 3.56
1047 7392 1.212751 GGAGGCGCAATTTGTGTCC 59.787 57.895 10.83 11.83 31.88 4.02
1050 7395 1.212751 GGCGCAATTTGTGTCCCTC 59.787 57.895 10.83 0.00 0.00 4.30
1071 7416 4.906626 CTGTCGCTCAGCACAGAT 57.093 55.556 19.00 0.00 38.75 2.90
1080 7425 1.078918 CAGCACAGATTCCTCGGCA 60.079 57.895 0.00 0.00 0.00 5.69
1230 7578 2.169789 CGAGACATTCCAGGCGCTG 61.170 63.158 7.64 3.34 0.00 5.18
1306 7654 1.450312 GTCGCCAGGGTCATCAAGG 60.450 63.158 0.00 0.00 0.00 3.61
1314 7662 0.035439 GGGTCATCAAGGAGCGGAAA 60.035 55.000 0.00 0.00 36.17 3.13
1315 7663 1.613255 GGGTCATCAAGGAGCGGAAAA 60.613 52.381 0.00 0.00 36.17 2.29
1320 7668 0.179004 TCAAGGAGCGGAAAAGGCAA 60.179 50.000 0.00 0.00 0.00 4.52
1326 7674 0.329596 AGCGGAAAAGGCAAGAGGAT 59.670 50.000 0.00 0.00 0.00 3.24
1328 7676 1.943340 GCGGAAAAGGCAAGAGGATAG 59.057 52.381 0.00 0.00 0.00 2.08
1332 7680 2.725221 AAAGGCAAGAGGATAGGCAG 57.275 50.000 0.00 0.00 0.00 4.85
1333 7681 0.182299 AAGGCAAGAGGATAGGCAGC 59.818 55.000 0.00 0.00 0.00 5.25
1334 7682 1.596477 GGCAAGAGGATAGGCAGCG 60.596 63.158 0.00 0.00 0.00 5.18
1359 7707 1.376424 CTGTCACATCTGCGGGCTT 60.376 57.895 0.00 0.00 0.00 4.35
1374 7722 2.815647 CTTGGCTTCGAGACGGGC 60.816 66.667 0.00 0.00 0.00 6.13
1377 7725 4.821589 GGCTTCGAGACGGGCCAG 62.822 72.222 4.39 1.85 42.10 4.85
2009 12297 5.749109 GTGATCCACTACCTCTGTTTTATCG 59.251 44.000 0.00 0.00 0.00 2.92
2054 12342 5.363868 ACAGCTGCAATAAGTCTACATCCTA 59.636 40.000 15.27 0.00 0.00 2.94
2060 12348 9.632807 CTGCAATAAGTCTACATCCTAATAGAC 57.367 37.037 3.69 3.69 45.15 2.59
2192 12481 6.420903 TCACTTCCGAATATCGATTCATGTTC 59.579 38.462 1.71 0.64 43.74 3.18
2193 12482 6.200854 CACTTCCGAATATCGATTCATGTTCA 59.799 38.462 1.71 0.00 43.74 3.18
2194 12483 6.422100 ACTTCCGAATATCGATTCATGTTCAG 59.578 38.462 1.71 0.00 43.74 3.02
2195 12484 5.230182 TCCGAATATCGATTCATGTTCAGG 58.770 41.667 1.71 7.26 43.74 3.86
2196 12485 4.389992 CCGAATATCGATTCATGTTCAGGG 59.610 45.833 1.71 0.00 43.74 4.45
2197 12486 4.143030 CGAATATCGATTCATGTTCAGGGC 60.143 45.833 1.71 0.00 43.74 5.19
2198 12487 2.715749 ATCGATTCATGTTCAGGGCA 57.284 45.000 0.00 0.00 0.00 5.36
2199 12488 2.715749 TCGATTCATGTTCAGGGCAT 57.284 45.000 0.00 0.00 0.00 4.40
2200 12489 3.003394 TCGATTCATGTTCAGGGCATT 57.997 42.857 0.00 0.00 0.00 3.56
2201 12490 2.684374 TCGATTCATGTTCAGGGCATTG 59.316 45.455 0.00 0.00 0.00 2.82
2202 12491 2.223641 CGATTCATGTTCAGGGCATTGG 60.224 50.000 0.00 0.00 0.00 3.16
2203 12492 2.307496 TTCATGTTCAGGGCATTGGT 57.693 45.000 0.00 0.00 0.00 3.67
2204 12493 2.307496 TCATGTTCAGGGCATTGGTT 57.693 45.000 0.00 0.00 0.00 3.67
2205 12494 2.170166 TCATGTTCAGGGCATTGGTTC 58.830 47.619 0.00 0.00 0.00 3.62
2206 12495 1.135315 CATGTTCAGGGCATTGGTTCG 60.135 52.381 0.00 0.00 0.00 3.95
2207 12496 0.893270 TGTTCAGGGCATTGGTTCGG 60.893 55.000 0.00 0.00 0.00 4.30
2208 12497 1.976474 TTCAGGGCATTGGTTCGGC 60.976 57.895 0.00 0.00 0.00 5.54
2212 12501 3.140814 GGCATTGGTTCGGCCCTC 61.141 66.667 0.00 0.00 41.90 4.30
2213 12502 3.508840 GCATTGGTTCGGCCCTCG 61.509 66.667 0.00 0.00 40.90 4.63
2214 12503 2.046314 CATTGGTTCGGCCCTCGT 60.046 61.111 0.00 0.00 40.32 4.18
2215 12504 1.219664 CATTGGTTCGGCCCTCGTA 59.780 57.895 0.00 0.00 40.32 3.43
2216 12505 0.391927 CATTGGTTCGGCCCTCGTAA 60.392 55.000 0.00 0.00 40.32 3.18
2217 12506 0.544697 ATTGGTTCGGCCCTCGTAAT 59.455 50.000 0.00 0.00 40.32 1.89
2218 12507 1.193323 TTGGTTCGGCCCTCGTAATA 58.807 50.000 0.00 0.00 40.32 0.98
2219 12508 0.461135 TGGTTCGGCCCTCGTAATAC 59.539 55.000 0.00 0.00 40.32 1.89
2220 12509 0.249615 GGTTCGGCCCTCGTAATACC 60.250 60.000 0.00 0.00 40.32 2.73
2221 12510 0.461135 GTTCGGCCCTCGTAATACCA 59.539 55.000 0.00 0.00 40.32 3.25
2222 12511 1.069668 GTTCGGCCCTCGTAATACCAT 59.930 52.381 0.00 0.00 40.32 3.55
2223 12512 1.416243 TCGGCCCTCGTAATACCATT 58.584 50.000 0.00 0.00 40.32 3.16
2224 12513 2.596346 TCGGCCCTCGTAATACCATTA 58.404 47.619 0.00 0.00 40.32 1.90
2225 12514 2.964464 TCGGCCCTCGTAATACCATTAA 59.036 45.455 0.00 0.00 40.32 1.40
2226 12515 3.579586 TCGGCCCTCGTAATACCATTAAT 59.420 43.478 0.00 0.00 40.32 1.40
2227 12516 3.930848 CGGCCCTCGTAATACCATTAATC 59.069 47.826 0.00 0.00 0.00 1.75
2228 12517 4.259356 GGCCCTCGTAATACCATTAATCC 58.741 47.826 0.00 0.00 0.00 3.01
2229 12518 4.019591 GGCCCTCGTAATACCATTAATCCT 60.020 45.833 0.00 0.00 0.00 3.24
2230 12519 4.935808 GCCCTCGTAATACCATTAATCCTG 59.064 45.833 0.00 0.00 0.00 3.86
2231 12520 5.488341 CCCTCGTAATACCATTAATCCTGG 58.512 45.833 0.00 0.00 39.80 4.45
2233 12522 6.465321 CCCTCGTAATACCATTAATCCTGGTT 60.465 42.308 4.60 0.00 44.67 3.67
2234 12523 6.649557 CCTCGTAATACCATTAATCCTGGTTC 59.350 42.308 4.60 0.00 44.67 3.62
2235 12524 6.218019 TCGTAATACCATTAATCCTGGTTCG 58.782 40.000 4.60 5.99 44.67 3.95
2236 12525 5.107220 CGTAATACCATTAATCCTGGTTCGC 60.107 44.000 4.60 0.00 44.67 4.70
2237 12526 4.706842 ATACCATTAATCCTGGTTCGCT 57.293 40.909 4.60 0.00 44.67 4.93
2238 12527 2.919228 ACCATTAATCCTGGTTCGCTC 58.081 47.619 0.00 0.00 44.67 5.03
2239 12528 2.238646 ACCATTAATCCTGGTTCGCTCA 59.761 45.455 0.00 0.00 44.67 4.26
2240 12529 2.614057 CCATTAATCCTGGTTCGCTCAC 59.386 50.000 0.00 0.00 0.00 3.51
2241 12530 2.004583 TTAATCCTGGTTCGCTCACG 57.995 50.000 0.00 0.00 42.01 4.35
2252 12541 3.998672 GCTCACGAACCGGGACCA 61.999 66.667 6.32 0.00 32.99 4.02
2253 12542 2.738480 CTCACGAACCGGGACCAA 59.262 61.111 6.32 0.00 32.99 3.67
2254 12543 1.070105 CTCACGAACCGGGACCAAA 59.930 57.895 6.32 0.00 32.99 3.28
2255 12544 0.949105 CTCACGAACCGGGACCAAAG 60.949 60.000 6.32 0.00 32.99 2.77
2256 12545 1.964373 CACGAACCGGGACCAAAGG 60.964 63.158 6.32 0.00 28.17 3.11
2257 12546 2.142104 ACGAACCGGGACCAAAGGA 61.142 57.895 6.32 0.00 0.00 3.36
2258 12547 1.375523 CGAACCGGGACCAAAGGAG 60.376 63.158 6.32 0.00 0.00 3.69
2259 12548 1.002502 GAACCGGGACCAAAGGAGG 60.003 63.158 6.32 0.00 0.00 4.30
2260 12549 3.205851 AACCGGGACCAAAGGAGGC 62.206 63.158 6.32 0.00 0.00 4.70
2261 12550 3.646715 CCGGGACCAAAGGAGGCA 61.647 66.667 0.00 0.00 0.00 4.75
2262 12551 2.434331 CGGGACCAAAGGAGGCAA 59.566 61.111 0.00 0.00 0.00 4.52
2263 12552 1.971695 CGGGACCAAAGGAGGCAAC 60.972 63.158 0.00 0.00 0.00 4.17
2280 12569 1.367840 ACTGTCCCAGTTCGTGAGC 59.632 57.895 0.00 0.00 42.59 4.26
2281 12570 1.374758 CTGTCCCAGTTCGTGAGCC 60.375 63.158 0.00 0.00 0.00 4.70
2282 12571 2.047179 GTCCCAGTTCGTGAGCCC 60.047 66.667 0.00 0.00 0.00 5.19
2283 12572 2.525629 TCCCAGTTCGTGAGCCCA 60.526 61.111 0.00 0.00 0.00 5.36
2284 12573 2.046892 CCCAGTTCGTGAGCCCAG 60.047 66.667 0.00 0.00 0.00 4.45
2285 12574 2.046892 CCAGTTCGTGAGCCCAGG 60.047 66.667 0.00 0.00 0.00 4.45
2286 12575 2.046892 CAGTTCGTGAGCCCAGGG 60.047 66.667 0.00 0.00 0.00 4.45
2287 12576 3.322466 AGTTCGTGAGCCCAGGGG 61.322 66.667 7.91 3.48 38.57 4.79
2315 12604 3.061848 CCACGTGGGCCATTGGTC 61.062 66.667 27.57 0.54 0.00 4.02
2321 12610 4.376170 GGGCCATTGGTCCCGGTT 62.376 66.667 15.98 0.00 42.67 4.44
2322 12611 2.754254 GGCCATTGGTCCCGGTTC 60.754 66.667 0.00 0.00 0.00 3.62
2323 12612 3.131478 GCCATTGGTCCCGGTTCG 61.131 66.667 0.00 0.00 0.00 3.95
2324 12613 2.349755 CCATTGGTCCCGGTTCGT 59.650 61.111 0.00 0.00 0.00 3.85
2325 12614 1.743995 CCATTGGTCCCGGTTCGTC 60.744 63.158 0.00 0.00 0.00 4.20
2326 12615 1.295423 CATTGGTCCCGGTTCGTCT 59.705 57.895 0.00 0.00 0.00 4.18
2327 12616 1.019278 CATTGGTCCCGGTTCGTCTG 61.019 60.000 0.00 0.00 0.00 3.51
2328 12617 2.180159 ATTGGTCCCGGTTCGTCTGG 62.180 60.000 0.00 2.18 42.06 3.86
2329 12618 2.993264 GGTCCCGGTTCGTCTGGA 60.993 66.667 0.00 0.00 45.09 3.86
2330 12619 2.260743 GTCCCGGTTCGTCTGGAC 59.739 66.667 0.00 0.00 45.09 4.02
2331 12620 2.993264 TCCCGGTTCGTCTGGACC 60.993 66.667 0.00 0.00 45.09 4.46
2332 12621 2.995574 CCCGGTTCGTCTGGACCT 60.996 66.667 0.00 0.00 45.09 3.85
2333 12622 2.580601 CCCGGTTCGTCTGGACCTT 61.581 63.158 0.00 0.00 45.09 3.50
2334 12623 1.370064 CCGGTTCGTCTGGACCTTT 59.630 57.895 0.00 0.00 45.09 3.11
2335 12624 0.250166 CCGGTTCGTCTGGACCTTTT 60.250 55.000 0.00 0.00 45.09 2.27
2336 12625 0.865769 CGGTTCGTCTGGACCTTTTG 59.134 55.000 0.00 0.00 0.00 2.44
2347 12636 4.090723 CCTTTTGGTCCCGGTTCC 57.909 61.111 0.00 2.55 34.07 3.62
2348 12637 1.151908 CCTTTTGGTCCCGGTTCCA 59.848 57.895 10.26 10.26 34.07 3.53
2349 12638 1.176619 CCTTTTGGTCCCGGTTCCAC 61.177 60.000 13.35 0.00 33.12 4.02
2350 12639 1.512156 CTTTTGGTCCCGGTTCCACG 61.512 60.000 13.35 3.50 33.12 4.94
2351 12640 4.629523 TTGGTCCCGGTTCCACGC 62.630 66.667 13.35 0.00 33.12 5.34
2356 12645 4.973055 CCCGGTTCCACGCACGAA 62.973 66.667 0.00 0.00 0.00 3.85
2357 12646 3.708734 CCGGTTCCACGCACGAAC 61.709 66.667 0.00 2.18 39.12 3.95
2360 12649 3.708734 GTTCCACGCACGAACCGG 61.709 66.667 0.00 0.00 34.75 5.28
2361 12650 4.973055 TTCCACGCACGAACCGGG 62.973 66.667 6.32 0.00 0.00 5.73
2366 12655 4.973055 CGCACGAACCGGGACCAA 62.973 66.667 6.32 0.00 28.17 3.67
2367 12656 2.359478 GCACGAACCGGGACCAAT 60.359 61.111 6.32 0.00 28.17 3.16
2368 12657 2.686816 GCACGAACCGGGACCAATG 61.687 63.158 6.32 0.00 28.17 2.82
2369 12658 2.359478 ACGAACCGGGACCAATGC 60.359 61.111 6.32 0.00 0.00 3.56
2370 12659 3.496131 CGAACCGGGACCAATGCG 61.496 66.667 6.32 0.00 0.00 4.73
2371 12660 3.810896 GAACCGGGACCAATGCGC 61.811 66.667 6.32 0.00 0.00 6.09
2393 12682 3.432335 CCCCTGGCCCATGACCAT 61.432 66.667 0.00 0.00 36.36 3.55
2394 12683 2.691732 CCCTGGCCCATGACCATT 59.308 61.111 0.00 0.00 36.36 3.16
2395 12684 1.654137 CCCCTGGCCCATGACCATTA 61.654 60.000 0.00 0.00 36.36 1.90
2396 12685 0.178981 CCCTGGCCCATGACCATTAG 60.179 60.000 0.00 1.62 36.36 1.73
2397 12686 0.552848 CCTGGCCCATGACCATTAGT 59.447 55.000 0.00 0.00 36.36 2.24
2398 12687 1.477558 CCTGGCCCATGACCATTAGTC 60.478 57.143 0.00 0.00 46.51 2.59
2399 12688 0.550914 TGGCCCATGACCATTAGTCC 59.449 55.000 0.00 0.00 45.68 3.85
2400 12689 0.178990 GGCCCATGACCATTAGTCCC 60.179 60.000 0.00 0.00 45.68 4.46
2401 12690 0.535102 GCCCATGACCATTAGTCCCG 60.535 60.000 0.00 0.00 45.68 5.14
2402 12691 0.108585 CCCATGACCATTAGTCCCGG 59.891 60.000 0.00 0.00 45.68 5.73
2403 12692 0.837272 CCATGACCATTAGTCCCGGT 59.163 55.000 0.00 0.00 45.68 5.28
2404 12693 1.211949 CCATGACCATTAGTCCCGGTT 59.788 52.381 0.00 0.00 45.68 4.44
2405 12694 2.356741 CCATGACCATTAGTCCCGGTTT 60.357 50.000 0.00 0.00 45.68 3.27
2406 12695 2.483014 TGACCATTAGTCCCGGTTTG 57.517 50.000 0.00 0.00 45.68 2.93
2407 12696 1.700739 TGACCATTAGTCCCGGTTTGT 59.299 47.619 0.00 0.00 45.68 2.83
2408 12697 2.081462 GACCATTAGTCCCGGTTTGTG 58.919 52.381 0.00 0.00 39.84 3.33
2409 12698 0.808755 CCATTAGTCCCGGTTTGTGC 59.191 55.000 0.00 0.00 0.00 4.57
2410 12699 0.808755 CATTAGTCCCGGTTTGTGCC 59.191 55.000 0.00 0.00 0.00 5.01
2411 12700 0.402504 ATTAGTCCCGGTTTGTGCCA 59.597 50.000 0.00 0.00 0.00 4.92
2412 12701 0.535553 TTAGTCCCGGTTTGTGCCAC 60.536 55.000 0.00 0.00 0.00 5.01
2413 12702 1.697082 TAGTCCCGGTTTGTGCCACA 61.697 55.000 0.00 0.00 0.00 4.17
2414 12703 2.122167 GTCCCGGTTTGTGCCACAA 61.122 57.895 6.08 6.08 36.11 3.33
2415 12704 2.122167 TCCCGGTTTGTGCCACAAC 61.122 57.895 10.34 5.74 37.90 3.32
2416 12705 2.415426 CCGGTTTGTGCCACAACC 59.585 61.111 10.34 13.38 37.90 3.77
2417 12706 2.415426 CGGTTTGTGCCACAACCC 59.585 61.111 13.69 13.69 37.90 4.11
2418 12707 2.415426 GGTTTGTGCCACAACCCG 59.585 61.111 10.34 0.00 37.90 5.28
2419 12708 2.415426 GTTTGTGCCACAACCCGG 59.585 61.111 10.34 0.00 37.90 5.73
2420 12709 2.835431 TTTGTGCCACAACCCGGG 60.835 61.111 22.25 22.25 37.90 5.73
2421 12710 3.360423 TTTGTGCCACAACCCGGGA 62.360 57.895 32.02 0.00 37.90 5.14
2422 12711 4.572571 TGTGCCACAACCCGGGAC 62.573 66.667 32.02 14.03 44.57 4.46
2423 12712 4.265056 GTGCCACAACCCGGGACT 62.265 66.667 32.02 11.40 41.35 3.85
2424 12713 2.527123 TGCCACAACCCGGGACTA 60.527 61.111 32.02 2.58 0.00 2.59
2425 12714 2.148052 TGCCACAACCCGGGACTAA 61.148 57.895 32.02 2.27 0.00 2.24
2426 12715 1.073548 GCCACAACCCGGGACTAAA 59.926 57.895 32.02 0.00 0.00 1.85
2427 12716 0.958876 GCCACAACCCGGGACTAAAG 60.959 60.000 32.02 12.22 0.00 1.85
2428 12717 0.322187 CCACAACCCGGGACTAAAGG 60.322 60.000 32.02 16.88 0.00 3.11
2433 12722 1.301954 CCCGGGACTAAAGGGTTGG 59.698 63.158 18.48 0.00 40.27 3.77
2434 12723 1.494716 CCCGGGACTAAAGGGTTGGT 61.495 60.000 18.48 0.00 40.27 3.67
2435 12724 0.035725 CCGGGACTAAAGGGTTGGTC 60.036 60.000 0.00 0.00 42.81 4.02
2439 12728 2.381725 GACTAAAGGGTTGGTCCTCG 57.618 55.000 0.00 0.00 38.85 4.63
2440 12729 1.622312 GACTAAAGGGTTGGTCCTCGT 59.378 52.381 0.00 0.00 38.85 4.18
2441 12730 2.038164 GACTAAAGGGTTGGTCCTCGTT 59.962 50.000 0.00 0.00 38.85 3.85
2442 12731 2.224450 ACTAAAGGGTTGGTCCTCGTTG 60.224 50.000 0.00 0.00 35.80 4.10
2443 12732 0.822121 AAAGGGTTGGTCCTCGTTGC 60.822 55.000 0.00 0.00 35.80 4.17
2444 12733 3.047877 GGGTTGGTCCTCGTTGCG 61.048 66.667 0.00 0.00 36.25 4.85
2445 12734 3.047877 GGTTGGTCCTCGTTGCGG 61.048 66.667 0.00 0.00 0.00 5.69
2446 12735 2.280592 GTTGGTCCTCGTTGCGGT 60.281 61.111 0.00 0.00 0.00 5.68
2447 12736 2.029964 TTGGTCCTCGTTGCGGTC 59.970 61.111 0.00 0.00 0.00 4.79
2448 12737 2.798364 TTGGTCCTCGTTGCGGTCA 61.798 57.895 0.00 0.00 0.00 4.02
2449 12738 2.432628 GGTCCTCGTTGCGGTCAG 60.433 66.667 0.00 0.00 0.00 3.51
2450 12739 2.649034 GTCCTCGTTGCGGTCAGA 59.351 61.111 0.00 0.00 0.00 3.27
2451 12740 1.444553 GTCCTCGTTGCGGTCAGAG 60.445 63.158 0.00 0.00 0.00 3.35
2452 12741 1.901948 TCCTCGTTGCGGTCAGAGT 60.902 57.895 0.00 0.00 0.00 3.24
2453 12742 1.006102 CCTCGTTGCGGTCAGAGTT 60.006 57.895 0.00 0.00 0.00 3.01
2454 12743 1.009389 CCTCGTTGCGGTCAGAGTTC 61.009 60.000 0.00 0.00 0.00 3.01
2455 12744 0.318699 CTCGTTGCGGTCAGAGTTCA 60.319 55.000 0.00 0.00 0.00 3.18
2456 12745 0.318699 TCGTTGCGGTCAGAGTTCAG 60.319 55.000 0.00 0.00 0.00 3.02
2457 12746 0.597637 CGTTGCGGTCAGAGTTCAGT 60.598 55.000 0.00 0.00 0.00 3.41
2458 12747 1.140816 GTTGCGGTCAGAGTTCAGTC 58.859 55.000 0.00 0.00 0.00 3.51
2459 12748 0.033504 TTGCGGTCAGAGTTCAGTCC 59.966 55.000 0.00 0.00 0.00 3.85
2460 12749 1.079750 GCGGTCAGAGTTCAGTCCC 60.080 63.158 0.00 0.00 0.00 4.46
2461 12750 1.816863 GCGGTCAGAGTTCAGTCCCA 61.817 60.000 0.00 0.00 0.00 4.37
2462 12751 0.038159 CGGTCAGAGTTCAGTCCCAC 60.038 60.000 0.00 0.00 0.00 4.61
2463 12752 0.321996 GGTCAGAGTTCAGTCCCACC 59.678 60.000 0.00 0.00 0.00 4.61
2464 12753 1.343069 GTCAGAGTTCAGTCCCACCT 58.657 55.000 0.00 0.00 0.00 4.00
2465 12754 1.273886 GTCAGAGTTCAGTCCCACCTC 59.726 57.143 0.00 0.00 0.00 3.85
2466 12755 0.244994 CAGAGTTCAGTCCCACCTCG 59.755 60.000 0.00 0.00 0.00 4.63
2467 12756 1.079750 GAGTTCAGTCCCACCTCGC 60.080 63.158 0.00 0.00 0.00 5.03
2468 12757 2.047179 GTTCAGTCCCACCTCGCC 60.047 66.667 0.00 0.00 0.00 5.54
2469 12758 2.525629 TTCAGTCCCACCTCGCCA 60.526 61.111 0.00 0.00 0.00 5.69
2470 12759 2.144078 TTCAGTCCCACCTCGCCAA 61.144 57.895 0.00 0.00 0.00 4.52
2471 12760 2.358737 CAGTCCCACCTCGCCAAC 60.359 66.667 0.00 0.00 0.00 3.77
2472 12761 3.637273 AGTCCCACCTCGCCAACC 61.637 66.667 0.00 0.00 0.00 3.77
2475 12764 4.323477 CCCACCTCGCCAACCGAA 62.323 66.667 0.00 0.00 46.81 4.30
2476 12765 2.742372 CCACCTCGCCAACCGAAG 60.742 66.667 0.00 0.00 46.81 3.79
2499 12788 2.095372 GTGCTCACACCGGTTTATAAGC 59.905 50.000 2.97 10.77 41.21 3.09
2500 12789 1.669265 GCTCACACCGGTTTATAAGCC 59.331 52.381 2.97 8.25 0.00 4.35
2501 12790 2.285977 CTCACACCGGTTTATAAGCCC 58.714 52.381 2.97 3.38 0.00 5.19
2502 12791 1.011333 CACACCGGTTTATAAGCCCG 58.989 55.000 2.97 13.93 41.37 6.13
2503 12792 0.614812 ACACCGGTTTATAAGCCCGT 59.385 50.000 2.97 13.35 40.10 5.28
2504 12793 1.292992 CACCGGTTTATAAGCCCGTC 58.707 55.000 2.97 0.00 40.10 4.79
2505 12794 0.178767 ACCGGTTTATAAGCCCGTCC 59.821 55.000 18.68 3.29 40.10 4.79
2506 12795 0.533531 CCGGTTTATAAGCCCGTCCC 60.534 60.000 18.68 0.00 40.10 4.46
2507 12796 0.466963 CGGTTTATAAGCCCGTCCCT 59.533 55.000 12.28 0.00 37.00 4.20
2508 12797 1.539712 CGGTTTATAAGCCCGTCCCTC 60.540 57.143 12.28 0.00 37.00 4.30
2509 12798 1.767088 GGTTTATAAGCCCGTCCCTCT 59.233 52.381 7.10 0.00 0.00 3.69
2510 12799 2.224233 GGTTTATAAGCCCGTCCCTCTC 60.224 54.545 7.10 0.00 0.00 3.20
2511 12800 2.699321 GTTTATAAGCCCGTCCCTCTCT 59.301 50.000 0.00 0.00 0.00 3.10
2512 12801 1.996798 TATAAGCCCGTCCCTCTCTG 58.003 55.000 0.00 0.00 0.00 3.35
2513 12802 1.403687 ATAAGCCCGTCCCTCTCTGC 61.404 60.000 0.00 0.00 0.00 4.26
2516 12805 2.685380 CCCGTCCCTCTCTGCCTT 60.685 66.667 0.00 0.00 0.00 4.35
2517 12806 2.581354 CCGTCCCTCTCTGCCTTG 59.419 66.667 0.00 0.00 0.00 3.61
2518 12807 2.286523 CCGTCCCTCTCTGCCTTGT 61.287 63.158 0.00 0.00 0.00 3.16
2519 12808 1.674057 CGTCCCTCTCTGCCTTGTT 59.326 57.895 0.00 0.00 0.00 2.83
2520 12809 0.671781 CGTCCCTCTCTGCCTTGTTG 60.672 60.000 0.00 0.00 0.00 3.33
2521 12810 0.687354 GTCCCTCTCTGCCTTGTTGA 59.313 55.000 0.00 0.00 0.00 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 7.567622 AGTTATTGTGACACTATACAGGGGTAT 59.432 37.037 8.94 0.00 42.71 2.73
6 7 6.899075 AGTTATTGTGACACTATACAGGGGTA 59.101 38.462 8.94 0.00 0.00 3.69
7 8 5.724854 AGTTATTGTGACACTATACAGGGGT 59.275 40.000 8.94 0.00 0.00 4.95
8 9 6.235231 AGTTATTGTGACACTATACAGGGG 57.765 41.667 8.94 0.00 0.00 4.79
9 10 7.822334 TCAAAGTTATTGTGACACTATACAGGG 59.178 37.037 8.94 0.77 0.00 4.45
10 11 8.771920 TCAAAGTTATTGTGACACTATACAGG 57.228 34.615 8.94 0.20 0.00 4.00
17 18 8.454106 GCTGATATTCAAAGTTATTGTGACACT 58.546 33.333 7.20 0.00 0.00 3.55
18 19 7.698130 GGCTGATATTCAAAGTTATTGTGACAC 59.302 37.037 0.00 0.00 0.00 3.67
19 20 7.413988 CGGCTGATATTCAAAGTTATTGTGACA 60.414 37.037 0.00 0.00 0.00 3.58
20 21 6.907212 CGGCTGATATTCAAAGTTATTGTGAC 59.093 38.462 0.00 0.00 0.00 3.67
21 22 6.597672 ACGGCTGATATTCAAAGTTATTGTGA 59.402 34.615 0.00 0.00 0.00 3.58
22 23 6.785191 ACGGCTGATATTCAAAGTTATTGTG 58.215 36.000 0.00 0.00 0.00 3.33
23 24 7.250569 CAACGGCTGATATTCAAAGTTATTGT 58.749 34.615 0.00 0.00 0.00 2.71
24 25 6.692681 CCAACGGCTGATATTCAAAGTTATTG 59.307 38.462 0.00 0.00 0.00 1.90
25 26 6.183360 CCCAACGGCTGATATTCAAAGTTATT 60.183 38.462 0.00 0.00 0.00 1.40
26 27 5.299279 CCCAACGGCTGATATTCAAAGTTAT 59.701 40.000 0.00 0.00 0.00 1.89
27 28 4.638421 CCCAACGGCTGATATTCAAAGTTA 59.362 41.667 0.00 0.00 0.00 2.24
28 29 3.443681 CCCAACGGCTGATATTCAAAGTT 59.556 43.478 0.00 0.00 0.00 2.66
29 30 3.016736 CCCAACGGCTGATATTCAAAGT 58.983 45.455 0.00 0.00 0.00 2.66
30 31 3.016736 ACCCAACGGCTGATATTCAAAG 58.983 45.455 0.00 0.00 0.00 2.77
31 32 3.080300 ACCCAACGGCTGATATTCAAA 57.920 42.857 0.00 0.00 0.00 2.69
32 33 2.799126 ACCCAACGGCTGATATTCAA 57.201 45.000 0.00 0.00 0.00 2.69
33 34 3.738982 CATACCCAACGGCTGATATTCA 58.261 45.455 0.00 0.00 0.00 2.57
34 35 2.484264 GCATACCCAACGGCTGATATTC 59.516 50.000 0.00 0.00 0.00 1.75
35 36 2.106511 AGCATACCCAACGGCTGATATT 59.893 45.455 0.00 0.00 34.83 1.28
36 37 1.699634 AGCATACCCAACGGCTGATAT 59.300 47.619 0.00 0.00 34.83 1.63
37 38 1.070134 GAGCATACCCAACGGCTGATA 59.930 52.381 0.00 0.00 36.59 2.15
38 39 0.179045 GAGCATACCCAACGGCTGAT 60.179 55.000 0.00 0.00 36.59 2.90
39 40 1.220749 GAGCATACCCAACGGCTGA 59.779 57.895 0.00 0.00 36.59 4.26
40 41 1.819632 GGAGCATACCCAACGGCTG 60.820 63.158 0.00 0.00 36.59 4.85
41 42 1.635817 ATGGAGCATACCCAACGGCT 61.636 55.000 0.00 0.00 37.22 5.52
42 43 1.152963 ATGGAGCATACCCAACGGC 60.153 57.895 0.00 0.00 37.22 5.68
43 44 0.535102 GGATGGAGCATACCCAACGG 60.535 60.000 0.00 0.00 37.22 4.44
44 45 0.880278 CGGATGGAGCATACCCAACG 60.880 60.000 0.00 0.00 37.22 4.10
45 46 0.468226 TCGGATGGAGCATACCCAAC 59.532 55.000 0.00 0.00 37.22 3.77
46 47 1.072173 CATCGGATGGAGCATACCCAA 59.928 52.381 10.18 0.00 37.22 4.12
47 48 0.686789 CATCGGATGGAGCATACCCA 59.313 55.000 10.18 0.00 38.19 4.51
48 49 3.540211 CATCGGATGGAGCATACCC 57.460 57.895 10.18 0.00 0.00 3.69
58 59 2.819115 CTGTCTCTCAACCATCGGATG 58.181 52.381 11.07 11.07 0.00 3.51
59 60 1.137872 GCTGTCTCTCAACCATCGGAT 59.862 52.381 0.00 0.00 0.00 4.18
60 61 0.532573 GCTGTCTCTCAACCATCGGA 59.467 55.000 0.00 0.00 0.00 4.55
61 62 0.803768 CGCTGTCTCTCAACCATCGG 60.804 60.000 0.00 0.00 0.00 4.18
62 63 0.171231 TCGCTGTCTCTCAACCATCG 59.829 55.000 0.00 0.00 0.00 3.84
63 64 2.370281 TTCGCTGTCTCTCAACCATC 57.630 50.000 0.00 0.00 0.00 3.51
64 65 2.419297 GGATTCGCTGTCTCTCAACCAT 60.419 50.000 0.00 0.00 0.00 3.55
65 66 1.066858 GGATTCGCTGTCTCTCAACCA 60.067 52.381 0.00 0.00 0.00 3.67
66 67 1.066858 TGGATTCGCTGTCTCTCAACC 60.067 52.381 0.00 0.00 0.00 3.77
67 68 2.370281 TGGATTCGCTGTCTCTCAAC 57.630 50.000 0.00 0.00 0.00 3.18
68 69 3.067106 GTTTGGATTCGCTGTCTCTCAA 58.933 45.455 0.00 0.00 0.00 3.02
69 70 2.037121 TGTTTGGATTCGCTGTCTCTCA 59.963 45.455 0.00 0.00 0.00 3.27
70 71 2.688507 TGTTTGGATTCGCTGTCTCTC 58.311 47.619 0.00 0.00 0.00 3.20
71 72 2.839486 TGTTTGGATTCGCTGTCTCT 57.161 45.000 0.00 0.00 0.00 3.10
72 73 3.896648 TTTGTTTGGATTCGCTGTCTC 57.103 42.857 0.00 0.00 0.00 3.36
73 74 5.647658 TGATATTTGTTTGGATTCGCTGTCT 59.352 36.000 0.00 0.00 0.00 3.41
74 75 5.879237 TGATATTTGTTTGGATTCGCTGTC 58.121 37.500 0.00 0.00 0.00 3.51
75 76 5.895636 TGATATTTGTTTGGATTCGCTGT 57.104 34.783 0.00 0.00 0.00 4.40
76 77 5.916883 GGATGATATTTGTTTGGATTCGCTG 59.083 40.000 0.00 0.00 0.00 5.18
77 78 5.277974 CGGATGATATTTGTTTGGATTCGCT 60.278 40.000 0.00 0.00 0.00 4.93
78 79 4.911610 CGGATGATATTTGTTTGGATTCGC 59.088 41.667 0.00 0.00 0.00 4.70
79 80 4.911610 GCGGATGATATTTGTTTGGATTCG 59.088 41.667 0.00 0.00 0.00 3.34
80 81 5.916883 CAGCGGATGATATTTGTTTGGATTC 59.083 40.000 0.00 0.00 0.00 2.52
81 82 5.360714 ACAGCGGATGATATTTGTTTGGATT 59.639 36.000 0.00 0.00 0.00 3.01
82 83 4.889409 ACAGCGGATGATATTTGTTTGGAT 59.111 37.500 0.00 0.00 0.00 3.41
83 84 4.269183 ACAGCGGATGATATTTGTTTGGA 58.731 39.130 0.00 0.00 0.00 3.53
84 85 4.637483 ACAGCGGATGATATTTGTTTGG 57.363 40.909 0.00 0.00 0.00 3.28
85 86 9.897744 ATTTATACAGCGGATGATATTTGTTTG 57.102 29.630 0.00 0.00 0.00 2.93
94 95 8.849168 TGATGAAAAATTTATACAGCGGATGAT 58.151 29.630 0.00 0.00 0.00 2.45
95 96 8.128582 GTGATGAAAAATTTATACAGCGGATGA 58.871 33.333 0.00 0.00 0.00 2.92
96 97 7.914871 TGTGATGAAAAATTTATACAGCGGATG 59.085 33.333 0.00 0.00 0.00 3.51
97 98 7.915397 GTGTGATGAAAAATTTATACAGCGGAT 59.085 33.333 0.00 0.00 0.00 4.18
98 99 7.094592 TGTGTGATGAAAAATTTATACAGCGGA 60.095 33.333 0.00 0.00 0.00 5.54
99 100 7.026562 TGTGTGATGAAAAATTTATACAGCGG 58.973 34.615 0.00 0.00 0.00 5.52
100 101 8.446489 TTGTGTGATGAAAAATTTATACAGCG 57.554 30.769 0.00 0.00 0.00 5.18
101 102 9.624697 TCTTGTGTGATGAAAAATTTATACAGC 57.375 29.630 0.00 0.00 0.00 4.40
106 107 9.903682 CAGAGTCTTGTGTGATGAAAAATTTAT 57.096 29.630 0.00 0.00 0.00 1.40
107 108 7.862372 GCAGAGTCTTGTGTGATGAAAAATTTA 59.138 33.333 0.00 0.00 0.00 1.40
108 109 6.698766 GCAGAGTCTTGTGTGATGAAAAATTT 59.301 34.615 0.00 0.00 0.00 1.82
109 110 6.211515 GCAGAGTCTTGTGTGATGAAAAATT 58.788 36.000 0.00 0.00 0.00 1.82
110 111 5.278660 GGCAGAGTCTTGTGTGATGAAAAAT 60.279 40.000 0.00 0.00 0.00 1.82
111 112 4.036734 GGCAGAGTCTTGTGTGATGAAAAA 59.963 41.667 0.00 0.00 0.00 1.94
112 113 3.565482 GGCAGAGTCTTGTGTGATGAAAA 59.435 43.478 0.00 0.00 0.00 2.29
113 114 3.141398 GGCAGAGTCTTGTGTGATGAAA 58.859 45.455 0.00 0.00 0.00 2.69
114 115 2.104622 TGGCAGAGTCTTGTGTGATGAA 59.895 45.455 0.00 0.00 0.00 2.57
115 116 1.693606 TGGCAGAGTCTTGTGTGATGA 59.306 47.619 0.00 0.00 0.00 2.92
116 117 1.802960 GTGGCAGAGTCTTGTGTGATG 59.197 52.381 0.00 0.00 0.00 3.07
117 118 1.606480 CGTGGCAGAGTCTTGTGTGAT 60.606 52.381 0.00 0.00 0.00 3.06
118 119 0.249447 CGTGGCAGAGTCTTGTGTGA 60.249 55.000 0.00 0.00 0.00 3.58
119 120 0.530650 ACGTGGCAGAGTCTTGTGTG 60.531 55.000 0.00 0.00 0.00 3.82
120 121 0.530650 CACGTGGCAGAGTCTTGTGT 60.531 55.000 7.95 0.00 0.00 3.72
121 122 1.224069 CCACGTGGCAGAGTCTTGTG 61.224 60.000 24.02 0.00 0.00 3.33
122 123 1.069765 CCACGTGGCAGAGTCTTGT 59.930 57.895 24.02 0.00 0.00 3.16
123 124 3.957260 CCACGTGGCAGAGTCTTG 58.043 61.111 24.02 0.00 0.00 3.02
133 134 3.651803 TTCAATTAAAAGGCCACGTGG 57.348 42.857 30.66 30.66 38.53 4.94
134 135 4.173256 GGATTCAATTAAAAGGCCACGTG 58.827 43.478 9.08 9.08 0.00 4.49
135 136 3.194755 GGGATTCAATTAAAAGGCCACGT 59.805 43.478 5.01 0.00 0.00 4.49
136 137 3.430236 GGGGATTCAATTAAAAGGCCACG 60.430 47.826 5.01 0.00 0.00 4.94
137 138 3.517500 TGGGGATTCAATTAAAAGGCCAC 59.482 43.478 5.01 0.00 0.00 5.01
138 139 3.517500 GTGGGGATTCAATTAAAAGGCCA 59.482 43.478 5.01 0.00 0.00 5.36
139 140 3.774766 AGTGGGGATTCAATTAAAAGGCC 59.225 43.478 0.00 0.00 0.00 5.19
140 141 6.731292 ATAGTGGGGATTCAATTAAAAGGC 57.269 37.500 0.00 0.00 0.00 4.35
141 142 8.078060 ACAATAGTGGGGATTCAATTAAAAGG 57.922 34.615 0.00 0.00 0.00 3.11
142 143 8.971073 AGACAATAGTGGGGATTCAATTAAAAG 58.029 33.333 0.00 0.00 0.00 2.27
143 144 8.893563 AGACAATAGTGGGGATTCAATTAAAA 57.106 30.769 0.00 0.00 0.00 1.52
144 145 8.112822 TGAGACAATAGTGGGGATTCAATTAAA 58.887 33.333 0.00 0.00 0.00 1.52
145 146 7.638444 TGAGACAATAGTGGGGATTCAATTAA 58.362 34.615 0.00 0.00 0.00 1.40
146 147 7.206789 TGAGACAATAGTGGGGATTCAATTA 57.793 36.000 0.00 0.00 0.00 1.40
147 148 6.078456 TGAGACAATAGTGGGGATTCAATT 57.922 37.500 0.00 0.00 0.00 2.32
148 149 5.715439 TGAGACAATAGTGGGGATTCAAT 57.285 39.130 0.00 0.00 0.00 2.57
149 150 5.715439 ATGAGACAATAGTGGGGATTCAA 57.285 39.130 0.00 0.00 0.00 2.69
150 151 7.392766 AATATGAGACAATAGTGGGGATTCA 57.607 36.000 0.00 0.00 0.00 2.57
151 152 9.965902 AATAATATGAGACAATAGTGGGGATTC 57.034 33.333 0.00 0.00 0.00 2.52
152 153 9.965902 GAATAATATGAGACAATAGTGGGGATT 57.034 33.333 0.00 0.00 0.00 3.01
153 154 9.343994 AGAATAATATGAGACAATAGTGGGGAT 57.656 33.333 0.00 0.00 0.00 3.85
154 155 8.742125 AGAATAATATGAGACAATAGTGGGGA 57.258 34.615 0.00 0.00 0.00 4.81
188 189 8.547069 GAATCAGATTCTTGGTATCGAAAGAAG 58.453 37.037 15.03 4.02 43.59 2.85
189 190 8.425577 GAATCAGATTCTTGGTATCGAAAGAA 57.574 34.615 15.03 11.35 44.25 2.52
235 236 9.921637 CCCAACTCTATAGAATCTAGATTGTTC 57.078 37.037 22.61 9.44 0.00 3.18
236 237 9.661954 TCCCAACTCTATAGAATCTAGATTGTT 57.338 33.333 22.61 14.41 0.00 2.83
237 238 9.084533 GTCCCAACTCTATAGAATCTAGATTGT 57.915 37.037 22.61 20.22 0.00 2.71
238 239 8.527810 GGTCCCAACTCTATAGAATCTAGATTG 58.472 40.741 22.61 7.95 0.00 2.67
239 240 8.461033 AGGTCCCAACTCTATAGAATCTAGATT 58.539 37.037 17.96 17.96 0.00 2.40
240 241 7.893302 CAGGTCCCAACTCTATAGAATCTAGAT 59.107 40.741 3.57 0.00 0.00 1.98
241 242 7.073853 TCAGGTCCCAACTCTATAGAATCTAGA 59.926 40.741 3.57 0.00 0.00 2.43
242 243 7.175990 GTCAGGTCCCAACTCTATAGAATCTAG 59.824 44.444 3.57 0.00 0.00 2.43
243 244 7.005296 GTCAGGTCCCAACTCTATAGAATCTA 58.995 42.308 3.57 0.00 0.00 1.98
244 245 5.836358 GTCAGGTCCCAACTCTATAGAATCT 59.164 44.000 3.57 0.00 0.00 2.40
245 246 5.836358 AGTCAGGTCCCAACTCTATAGAATC 59.164 44.000 3.57 0.00 0.00 2.52
246 247 5.782925 AGTCAGGTCCCAACTCTATAGAAT 58.217 41.667 3.57 0.00 0.00 2.40
247 248 5.208294 AGTCAGGTCCCAACTCTATAGAA 57.792 43.478 3.57 0.00 0.00 2.10
248 249 4.883021 AGTCAGGTCCCAACTCTATAGA 57.117 45.455 1.69 1.69 0.00 1.98
249 250 5.697067 ACTAGTCAGGTCCCAACTCTATAG 58.303 45.833 0.00 0.00 0.00 1.31
250 251 5.728937 ACTAGTCAGGTCCCAACTCTATA 57.271 43.478 0.00 0.00 0.00 1.31
251 252 4.611564 ACTAGTCAGGTCCCAACTCTAT 57.388 45.455 0.00 0.00 0.00 1.98
252 253 5.728937 ATACTAGTCAGGTCCCAACTCTA 57.271 43.478 0.00 0.00 0.00 2.43
253 254 4.611564 ATACTAGTCAGGTCCCAACTCT 57.388 45.455 0.00 0.00 0.00 3.24
254 255 6.980416 ATTATACTAGTCAGGTCCCAACTC 57.020 41.667 0.00 0.00 0.00 3.01
255 256 7.182206 ACAAATTATACTAGTCAGGTCCCAACT 59.818 37.037 0.00 0.00 0.00 3.16
256 257 7.336396 ACAAATTATACTAGTCAGGTCCCAAC 58.664 38.462 0.00 0.00 0.00 3.77
257 258 7.504926 ACAAATTATACTAGTCAGGTCCCAA 57.495 36.000 0.00 0.00 0.00 4.12
258 259 8.647796 CATACAAATTATACTAGTCAGGTCCCA 58.352 37.037 0.00 0.00 0.00 4.37
259 260 8.095169 CCATACAAATTATACTAGTCAGGTCCC 58.905 40.741 0.00 0.00 0.00 4.46
260 261 8.867097 TCCATACAAATTATACTAGTCAGGTCC 58.133 37.037 0.00 0.00 0.00 4.46
276 277 9.097257 CGGCATTTTATTTTCTTCCATACAAAT 57.903 29.630 0.00 0.00 0.00 2.32
283 284 6.582677 TTCTCGGCATTTTATTTTCTTCCA 57.417 33.333 0.00 0.00 0.00 3.53
300 301 1.027357 CAGGGGAAATGCATTCTCGG 58.973 55.000 13.38 0.00 39.62 4.63
352 353 5.748152 TCCGGTACTGTTTAATTATACGTGC 59.252 40.000 0.00 9.95 0.00 5.34
353 354 6.418819 CCTCCGGTACTGTTTAATTATACGTG 59.581 42.308 0.00 5.93 0.00 4.49
354 355 6.461509 CCCTCCGGTACTGTTTAATTATACGT 60.462 42.308 0.00 0.00 0.00 3.57
355 356 5.922544 CCCTCCGGTACTGTTTAATTATACG 59.077 44.000 0.00 0.00 0.00 3.06
356 357 7.054491 TCCCTCCGGTACTGTTTAATTATAC 57.946 40.000 0.00 0.00 0.00 1.47
358 359 5.664457 ACTCCCTCCGGTACTGTTTAATTAT 59.336 40.000 0.00 0.00 0.00 1.28
364 365 2.610438 TACTCCCTCCGGTACTGTTT 57.390 50.000 0.00 0.00 0.00 2.83
375 385 4.082463 GCTCTAGCACATACATACTCCCTC 60.082 50.000 0.00 0.00 41.59 4.30
376 386 3.829601 GCTCTAGCACATACATACTCCCT 59.170 47.826 0.00 0.00 41.59 4.20
406 421 5.344743 TCTTTCAGACTTGAGACTTGTGT 57.655 39.130 0.00 0.00 34.15 3.72
411 426 4.759183 GCCAAATCTTTCAGACTTGAGACT 59.241 41.667 0.00 0.00 33.65 3.24
419 436 0.796312 TCGCGCCAAATCTTTCAGAC 59.204 50.000 0.00 0.00 0.00 3.51
458 477 4.161754 AGGGTTTGGAACGTTCTATAGGAG 59.838 45.833 26.32 0.00 0.00 3.69
459 478 4.098894 AGGGTTTGGAACGTTCTATAGGA 58.901 43.478 26.32 3.94 0.00 2.94
461 480 4.874396 GGAAGGGTTTGGAACGTTCTATAG 59.126 45.833 26.32 0.00 0.00 1.31
462 481 4.533311 AGGAAGGGTTTGGAACGTTCTATA 59.467 41.667 26.32 14.05 0.00 1.31
463 482 3.329814 AGGAAGGGTTTGGAACGTTCTAT 59.670 43.478 26.32 5.58 0.00 1.98
521 546 6.935741 TCCATTAATTTAATCCGGACACTG 57.064 37.500 6.12 0.00 0.00 3.66
528 553 8.859156 CCGCAATTAATCCATTAATTTAATCCG 58.141 33.333 12.64 10.54 45.62 4.18
596 4705 3.036084 CACCTGTCACGCCACGAC 61.036 66.667 0.00 0.00 0.00 4.34
598 4707 3.036084 GTCACCTGTCACGCCACG 61.036 66.667 0.00 0.00 0.00 4.94
706 4829 1.068194 GGATTGGATCGAGCTCCGTAG 60.068 57.143 8.47 0.00 38.21 3.51
707 4830 0.959553 GGATTGGATCGAGCTCCGTA 59.040 55.000 8.47 0.00 38.21 4.02
708 4831 1.742768 GGATTGGATCGAGCTCCGT 59.257 57.895 8.47 0.00 38.21 4.69
840 4997 2.499303 ATAGGTTGTGTGGGCAGGGC 62.499 60.000 0.00 0.00 0.00 5.19
841 4998 0.916086 TATAGGTTGTGTGGGCAGGG 59.084 55.000 0.00 0.00 0.00 4.45
968 7300 3.548745 TTGTCTCAATGATCCGCTGAT 57.451 42.857 0.00 0.00 0.00 2.90
969 7301 3.118665 TGATTGTCTCAATGATCCGCTGA 60.119 43.478 0.00 0.00 0.00 4.26
982 7321 2.165030 CCATGGGTTTGCTGATTGTCTC 59.835 50.000 2.85 0.00 0.00 3.36
989 7328 1.304381 GCTCCCATGGGTTTGCTGA 60.304 57.895 30.28 8.35 36.47 4.26
1034 7379 1.154225 GCGAGGGACACAAATTGCG 60.154 57.895 0.00 0.00 0.00 4.85
1037 7382 1.302511 AGCGCGAGGGACACAAATT 60.303 52.632 12.10 0.00 0.00 1.82
1039 7384 2.664851 CAGCGCGAGGGACACAAA 60.665 61.111 12.10 0.00 0.00 2.83
1071 7416 2.029964 GTGGACGTTGCCGAGGAA 59.970 61.111 0.00 0.00 37.88 3.36
1175 7523 1.284982 CTTGCACACGAACTCTCCCG 61.285 60.000 0.00 0.00 0.00 5.14
1298 7646 1.950484 GCCTTTTCCGCTCCTTGATGA 60.950 52.381 0.00 0.00 0.00 2.92
1306 7654 0.321653 TCCTCTTGCCTTTTCCGCTC 60.322 55.000 0.00 0.00 0.00 5.03
1314 7662 0.182299 GCTGCCTATCCTCTTGCCTT 59.818 55.000 0.00 0.00 0.00 4.35
1315 7663 1.835693 GCTGCCTATCCTCTTGCCT 59.164 57.895 0.00 0.00 0.00 4.75
1320 7668 2.444706 TGCCGCTGCCTATCCTCT 60.445 61.111 0.00 0.00 36.33 3.69
1326 7674 4.435436 CAGTCGTGCCGCTGCCTA 62.435 66.667 0.00 0.00 36.33 3.93
1332 7680 2.730672 GATGTGACAGTCGTGCCGC 61.731 63.158 0.00 0.00 0.00 6.53
1333 7681 1.080501 AGATGTGACAGTCGTGCCG 60.081 57.895 0.00 0.00 0.00 5.69
1334 7682 1.630244 GCAGATGTGACAGTCGTGCC 61.630 60.000 0.00 0.00 0.00 5.01
1344 7692 2.046023 CCAAGCCCGCAGATGTGA 60.046 61.111 0.00 0.00 0.00 3.58
1971 12259 5.805728 AGTGGATCACGGTTTCTAAATCTT 58.194 37.500 0.00 0.00 39.64 2.40
1986 12274 5.681437 GCGATAAAACAGAGGTAGTGGATCA 60.681 44.000 0.00 0.00 0.00 2.92
2009 12297 1.795768 TTGGAACAGACAGATCACGC 58.204 50.000 0.00 0.00 42.39 5.34
2060 12348 6.982724 TGTGCTCATATCTCTTGATGTGTTAG 59.017 38.462 0.00 0.00 40.96 2.34
2192 12481 3.451894 GGCCGAACCAATGCCCTG 61.452 66.667 0.00 0.00 39.30 4.45
2195 12484 3.140814 GAGGGCCGAACCAATGCC 61.141 66.667 0.00 0.00 44.59 4.40
2196 12485 2.862674 TACGAGGGCCGAACCAATGC 62.863 60.000 0.00 0.00 42.05 3.56
2197 12486 0.391927 TTACGAGGGCCGAACCAATG 60.392 55.000 0.00 0.00 42.05 2.82
2198 12487 0.544697 ATTACGAGGGCCGAACCAAT 59.455 50.000 0.00 0.00 42.05 3.16
2199 12488 1.134729 GTATTACGAGGGCCGAACCAA 60.135 52.381 0.00 0.00 42.05 3.67
2200 12489 0.461135 GTATTACGAGGGCCGAACCA 59.539 55.000 0.00 0.00 42.05 3.67
2201 12490 0.249615 GGTATTACGAGGGCCGAACC 60.250 60.000 0.00 0.00 41.76 3.62
2202 12491 0.461135 TGGTATTACGAGGGCCGAAC 59.539 55.000 0.00 0.00 41.76 3.95
2203 12492 1.416243 ATGGTATTACGAGGGCCGAA 58.584 50.000 0.00 0.00 41.76 4.30
2204 12493 1.416243 AATGGTATTACGAGGGCCGA 58.584 50.000 0.00 0.00 41.76 5.54
2205 12494 3.389925 TTAATGGTATTACGAGGGCCG 57.610 47.619 0.00 0.00 45.44 6.13
2206 12495 4.019591 AGGATTAATGGTATTACGAGGGCC 60.020 45.833 0.00 0.00 0.00 5.80
2207 12496 4.935808 CAGGATTAATGGTATTACGAGGGC 59.064 45.833 0.00 0.00 0.00 5.19
2208 12497 5.488341 CCAGGATTAATGGTATTACGAGGG 58.512 45.833 0.00 0.00 32.85 4.30
2219 12508 2.614057 GTGAGCGAACCAGGATTAATGG 59.386 50.000 0.00 0.00 43.87 3.16
2220 12509 2.285220 CGTGAGCGAACCAGGATTAATG 59.715 50.000 0.00 0.00 41.33 1.90
2221 12510 2.167693 TCGTGAGCGAACCAGGATTAAT 59.832 45.455 0.00 0.00 44.92 1.40
2222 12511 1.546923 TCGTGAGCGAACCAGGATTAA 59.453 47.619 0.00 0.00 44.92 1.40
2223 12512 1.179152 TCGTGAGCGAACCAGGATTA 58.821 50.000 0.00 0.00 44.92 1.75
2224 12513 1.972198 TCGTGAGCGAACCAGGATT 59.028 52.632 0.00 0.00 44.92 3.01
2225 12514 3.694746 TCGTGAGCGAACCAGGAT 58.305 55.556 0.00 0.00 44.92 3.24
2235 12524 2.999739 TTTGGTCCCGGTTCGTGAGC 63.000 60.000 0.00 0.00 32.96 4.26
2236 12525 0.949105 CTTTGGTCCCGGTTCGTGAG 60.949 60.000 0.00 0.00 0.00 3.51
2237 12526 1.070105 CTTTGGTCCCGGTTCGTGA 59.930 57.895 0.00 0.00 0.00 4.35
2238 12527 1.964373 CCTTTGGTCCCGGTTCGTG 60.964 63.158 0.00 0.00 0.00 4.35
2239 12528 2.108278 CTCCTTTGGTCCCGGTTCGT 62.108 60.000 0.00 0.00 0.00 3.85
2240 12529 1.375523 CTCCTTTGGTCCCGGTTCG 60.376 63.158 0.00 0.00 0.00 3.95
2241 12530 1.002502 CCTCCTTTGGTCCCGGTTC 60.003 63.158 0.00 0.00 0.00 3.62
2242 12531 3.167414 CCTCCTTTGGTCCCGGTT 58.833 61.111 0.00 0.00 0.00 4.44
2243 12532 3.647771 GCCTCCTTTGGTCCCGGT 61.648 66.667 0.00 0.00 0.00 5.28
2244 12533 3.204467 TTGCCTCCTTTGGTCCCGG 62.204 63.158 0.00 0.00 0.00 5.73
2245 12534 1.971695 GTTGCCTCCTTTGGTCCCG 60.972 63.158 0.00 0.00 0.00 5.14
2246 12535 0.895559 CAGTTGCCTCCTTTGGTCCC 60.896 60.000 0.00 0.00 0.00 4.46
2247 12536 0.178990 ACAGTTGCCTCCTTTGGTCC 60.179 55.000 0.00 0.00 0.00 4.46
2248 12537 1.239347 GACAGTTGCCTCCTTTGGTC 58.761 55.000 0.00 0.00 0.00 4.02
2249 12538 0.178990 GGACAGTTGCCTCCTTTGGT 60.179 55.000 0.00 0.00 0.00 3.67
2250 12539 0.895559 GGGACAGTTGCCTCCTTTGG 60.896 60.000 0.00 0.00 0.00 3.28
2251 12540 0.178992 TGGGACAGTTGCCTCCTTTG 60.179 55.000 0.00 0.00 33.27 2.77
2252 12541 2.240510 TGGGACAGTTGCCTCCTTT 58.759 52.632 0.00 0.00 33.27 3.11
2253 12542 4.002006 TGGGACAGTTGCCTCCTT 57.998 55.556 0.00 0.00 33.27 3.36
2264 12553 2.741092 GGCTCACGAACTGGGACA 59.259 61.111 0.00 0.00 0.00 4.02
2265 12554 2.047179 GGGCTCACGAACTGGGAC 60.047 66.667 0.00 0.00 0.00 4.46
2266 12555 2.525629 TGGGCTCACGAACTGGGA 60.526 61.111 0.00 0.00 0.00 4.37
2267 12556 2.046892 CTGGGCTCACGAACTGGG 60.047 66.667 0.00 0.00 0.00 4.45
2268 12557 2.046892 CCTGGGCTCACGAACTGG 60.047 66.667 0.00 0.00 0.00 4.00
2269 12558 2.046892 CCCTGGGCTCACGAACTG 60.047 66.667 0.00 0.00 0.00 3.16
2270 12559 3.322466 CCCCTGGGCTCACGAACT 61.322 66.667 7.39 0.00 0.00 3.01
2271 12560 4.410400 CCCCCTGGGCTCACGAAC 62.410 72.222 7.39 0.00 35.35 3.95
2298 12587 3.061848 GACCAATGGCCCACGTGG 61.062 66.667 28.26 28.26 37.09 4.94
2299 12588 3.061848 GGACCAATGGCCCACGTG 61.062 66.667 9.08 9.08 0.00 4.49
2300 12589 4.360405 GGGACCAATGGCCCACGT 62.360 66.667 21.67 0.00 38.39 4.49
2304 12593 4.376170 AACCGGGACCAATGGCCC 62.376 66.667 18.15 18.15 36.26 5.80
2305 12594 2.754254 GAACCGGGACCAATGGCC 60.754 66.667 6.32 0.00 0.00 5.36
2306 12595 3.131478 CGAACCGGGACCAATGGC 61.131 66.667 6.32 0.00 0.00 4.40
2307 12596 1.743995 GACGAACCGGGACCAATGG 60.744 63.158 6.32 0.00 0.00 3.16
2308 12597 1.019278 CAGACGAACCGGGACCAATG 61.019 60.000 6.32 0.00 0.00 2.82
2309 12598 1.295423 CAGACGAACCGGGACCAAT 59.705 57.895 6.32 0.00 0.00 3.16
2310 12599 2.738480 CAGACGAACCGGGACCAA 59.262 61.111 6.32 0.00 0.00 3.67
2311 12600 3.307906 CCAGACGAACCGGGACCA 61.308 66.667 6.32 0.00 0.00 4.02
2312 12601 2.993264 TCCAGACGAACCGGGACC 60.993 66.667 6.32 0.00 0.00 4.46
2313 12602 2.260743 GTCCAGACGAACCGGGAC 59.739 66.667 6.32 9.54 42.60 4.46
2314 12603 2.993264 GGTCCAGACGAACCGGGA 60.993 66.667 6.32 0.00 0.00 5.14
2315 12604 2.108278 AAAGGTCCAGACGAACCGGG 62.108 60.000 6.32 0.00 40.63 5.73
2316 12605 0.250166 AAAAGGTCCAGACGAACCGG 60.250 55.000 0.00 0.00 40.63 5.28
2317 12606 0.865769 CAAAAGGTCCAGACGAACCG 59.134 55.000 0.00 0.00 40.63 4.44
2318 12607 1.235724 CCAAAAGGTCCAGACGAACC 58.764 55.000 0.00 0.00 35.69 3.62
2319 12608 1.871676 GACCAAAAGGTCCAGACGAAC 59.128 52.381 3.27 0.00 33.21 3.95
2320 12609 2.249844 GACCAAAAGGTCCAGACGAA 57.750 50.000 3.27 0.00 33.21 3.85
2328 12617 0.892358 GGAACCGGGACCAAAAGGTC 60.892 60.000 6.32 6.11 35.68 3.85
2329 12618 1.152138 GGAACCGGGACCAAAAGGT 59.848 57.895 6.32 0.00 38.88 3.50
2330 12619 1.151908 TGGAACCGGGACCAAAAGG 59.848 57.895 17.42 0.00 32.93 3.11
2331 12620 1.512156 CGTGGAACCGGGACCAAAAG 61.512 60.000 20.50 12.61 37.94 2.27
2332 12621 1.526455 CGTGGAACCGGGACCAAAA 60.526 57.895 20.50 0.00 37.94 2.44
2333 12622 2.111460 CGTGGAACCGGGACCAAA 59.889 61.111 20.50 0.00 37.94 3.28
2334 12623 4.629523 GCGTGGAACCGGGACCAA 62.630 66.667 20.50 5.59 37.94 3.67
2339 12628 4.973055 TTCGTGCGTGGAACCGGG 62.973 66.667 6.32 0.00 0.00 5.73
2340 12629 3.708734 GTTCGTGCGTGGAACCGG 61.709 66.667 0.00 0.00 38.23 5.28
2343 12632 3.708734 CCGGTTCGTGCGTGGAAC 61.709 66.667 0.00 5.95 42.32 3.62
2344 12633 4.973055 CCCGGTTCGTGCGTGGAA 62.973 66.667 0.00 0.00 0.00 3.53
2349 12638 4.973055 TTGGTCCCGGTTCGTGCG 62.973 66.667 0.00 0.00 0.00 5.34
2350 12639 2.359478 ATTGGTCCCGGTTCGTGC 60.359 61.111 0.00 0.00 0.00 5.34
2351 12640 2.686816 GCATTGGTCCCGGTTCGTG 61.687 63.158 0.00 0.00 0.00 4.35
2352 12641 2.359478 GCATTGGTCCCGGTTCGT 60.359 61.111 0.00 0.00 0.00 3.85
2353 12642 3.496131 CGCATTGGTCCCGGTTCG 61.496 66.667 0.00 0.00 0.00 3.95
2354 12643 3.810896 GCGCATTGGTCCCGGTTC 61.811 66.667 0.30 0.00 0.00 3.62
2376 12665 1.654137 TAATGGTCATGGGCCAGGGG 61.654 60.000 19.39 7.34 39.65 4.79
2377 12666 0.178981 CTAATGGTCATGGGCCAGGG 60.179 60.000 19.39 10.12 39.65 4.45
2378 12667 0.552848 ACTAATGGTCATGGGCCAGG 59.447 55.000 12.97 12.97 39.65 4.45
2379 12668 1.477558 GGACTAATGGTCATGGGCCAG 60.478 57.143 13.78 4.37 46.16 4.85
2380 12669 0.550914 GGACTAATGGTCATGGGCCA 59.449 55.000 9.61 9.61 46.16 5.36
2381 12670 0.178990 GGGACTAATGGTCATGGGCC 60.179 60.000 0.00 0.00 46.16 5.80
2382 12671 0.535102 CGGGACTAATGGTCATGGGC 60.535 60.000 0.00 0.00 46.16 5.36
2383 12672 0.108585 CCGGGACTAATGGTCATGGG 59.891 60.000 0.00 0.00 46.16 4.00
2384 12673 0.837272 ACCGGGACTAATGGTCATGG 59.163 55.000 6.32 2.24 46.16 3.66
2385 12674 2.682856 CAAACCGGGACTAATGGTCATG 59.317 50.000 6.32 0.00 46.16 3.07
2386 12675 2.307686 ACAAACCGGGACTAATGGTCAT 59.692 45.455 6.32 0.00 46.16 3.06
2387 12676 1.700739 ACAAACCGGGACTAATGGTCA 59.299 47.619 6.32 0.00 46.16 4.02
2388 12677 2.081462 CACAAACCGGGACTAATGGTC 58.919 52.381 6.32 0.00 43.79 4.02
2389 12678 1.884928 GCACAAACCGGGACTAATGGT 60.885 52.381 6.32 0.00 37.68 3.55
2390 12679 0.808755 GCACAAACCGGGACTAATGG 59.191 55.000 6.32 0.00 0.00 3.16
2391 12680 0.808755 GGCACAAACCGGGACTAATG 59.191 55.000 6.32 0.00 0.00 1.90
2392 12681 0.402504 TGGCACAAACCGGGACTAAT 59.597 50.000 6.32 0.00 31.92 1.73
2393 12682 0.535553 GTGGCACAAACCGGGACTAA 60.536 55.000 13.86 0.00 44.16 2.24
2394 12683 1.071814 GTGGCACAAACCGGGACTA 59.928 57.895 13.86 0.00 44.16 2.59
2395 12684 2.203294 GTGGCACAAACCGGGACT 60.203 61.111 13.86 0.00 44.16 3.85
2396 12685 2.122167 TTGTGGCACAAACCGGGAC 61.122 57.895 29.45 0.00 44.16 4.46
2397 12686 2.122167 GTTGTGGCACAAACCGGGA 61.122 57.895 32.60 8.30 44.16 5.14
2398 12687 2.415426 GTTGTGGCACAAACCGGG 59.585 61.111 32.60 0.00 44.16 5.73
2399 12688 2.415426 GGTTGTGGCACAAACCGG 59.585 61.111 32.93 0.00 44.16 5.28
2402 12691 2.415426 CCGGGTTGTGGCACAAAC 59.585 61.111 34.56 34.56 44.74 2.93
2403 12692 2.835431 CCCGGGTTGTGGCACAAA 60.835 61.111 32.60 15.51 44.16 2.83
2404 12693 3.810188 TCCCGGGTTGTGGCACAA 61.810 61.111 28.09 28.09 44.16 3.33
2405 12694 4.572571 GTCCCGGGTTGTGGCACA 62.573 66.667 22.86 17.96 0.00 4.57
2406 12695 2.400269 TTAGTCCCGGGTTGTGGCAC 62.400 60.000 22.86 11.55 0.00 5.01
2407 12696 1.706995 TTTAGTCCCGGGTTGTGGCA 61.707 55.000 22.86 0.00 0.00 4.92
2408 12697 0.958876 CTTTAGTCCCGGGTTGTGGC 60.959 60.000 22.86 5.15 0.00 5.01
2409 12698 0.322187 CCTTTAGTCCCGGGTTGTGG 60.322 60.000 22.86 12.57 0.00 4.17
2410 12699 0.322187 CCCTTTAGTCCCGGGTTGTG 60.322 60.000 22.86 7.17 33.16 3.33
2411 12700 2.072366 CCCTTTAGTCCCGGGTTGT 58.928 57.895 22.86 8.90 33.16 3.32
2415 12704 1.301954 CCAACCCTTTAGTCCCGGG 59.698 63.158 16.85 16.85 43.79 5.73
2416 12705 0.035725 GACCAACCCTTTAGTCCCGG 60.036 60.000 0.00 0.00 0.00 5.73
2417 12706 0.035725 GGACCAACCCTTTAGTCCCG 60.036 60.000 0.00 0.00 42.49 5.14
2418 12707 3.972368 GGACCAACCCTTTAGTCCC 57.028 57.895 0.00 0.00 42.49 4.46
2420 12709 1.622312 ACGAGGACCAACCCTTTAGTC 59.378 52.381 0.00 0.00 40.05 2.59
2421 12710 1.725803 ACGAGGACCAACCCTTTAGT 58.274 50.000 0.00 0.00 40.05 2.24
2422 12711 2.423577 CAACGAGGACCAACCCTTTAG 58.576 52.381 0.00 0.00 40.05 1.85
2423 12712 1.543871 GCAACGAGGACCAACCCTTTA 60.544 52.381 0.00 0.00 40.05 1.85
2424 12713 0.822121 GCAACGAGGACCAACCCTTT 60.822 55.000 0.00 0.00 40.05 3.11
2425 12714 1.228154 GCAACGAGGACCAACCCTT 60.228 57.895 0.00 0.00 40.05 3.95
2426 12715 2.430367 GCAACGAGGACCAACCCT 59.570 61.111 0.00 0.00 40.05 4.34
2427 12716 3.047877 CGCAACGAGGACCAACCC 61.048 66.667 0.00 0.00 40.05 4.11
2428 12717 3.047877 CCGCAACGAGGACCAACC 61.048 66.667 0.00 0.00 39.35 3.77
2429 12718 2.280592 ACCGCAACGAGGACCAAC 60.281 61.111 0.00 0.00 0.00 3.77
2430 12719 2.029964 GACCGCAACGAGGACCAA 59.970 61.111 0.00 0.00 0.00 3.67
2431 12720 3.220999 CTGACCGCAACGAGGACCA 62.221 63.158 0.00 0.00 0.00 4.02
2432 12721 2.432628 CTGACCGCAACGAGGACC 60.433 66.667 0.00 0.00 0.00 4.46
2433 12722 1.444553 CTCTGACCGCAACGAGGAC 60.445 63.158 0.00 0.00 0.00 3.85
2434 12723 1.461091 AACTCTGACCGCAACGAGGA 61.461 55.000 0.00 0.00 0.00 3.71
2435 12724 1.006102 AACTCTGACCGCAACGAGG 60.006 57.895 0.00 0.00 0.00 4.63
2436 12725 0.318699 TGAACTCTGACCGCAACGAG 60.319 55.000 0.00 0.00 0.00 4.18
2437 12726 0.318699 CTGAACTCTGACCGCAACGA 60.319 55.000 0.00 0.00 0.00 3.85
2438 12727 0.597637 ACTGAACTCTGACCGCAACG 60.598 55.000 0.00 0.00 0.00 4.10
2439 12728 1.140816 GACTGAACTCTGACCGCAAC 58.859 55.000 0.00 0.00 0.00 4.17
2440 12729 0.033504 GGACTGAACTCTGACCGCAA 59.966 55.000 0.00 0.00 0.00 4.85
2441 12730 1.666011 GGACTGAACTCTGACCGCA 59.334 57.895 0.00 0.00 0.00 5.69
2442 12731 1.079750 GGGACTGAACTCTGACCGC 60.080 63.158 0.57 0.00 32.37 5.68
2443 12732 0.038159 GTGGGACTGAACTCTGACCG 60.038 60.000 0.57 0.00 32.37 4.79
2444 12733 0.321996 GGTGGGACTGAACTCTGACC 59.678 60.000 0.00 0.00 0.00 4.02
2445 12734 1.273886 GAGGTGGGACTGAACTCTGAC 59.726 57.143 0.00 0.00 0.00 3.51
2446 12735 1.633774 GAGGTGGGACTGAACTCTGA 58.366 55.000 0.00 0.00 0.00 3.27
2447 12736 0.244994 CGAGGTGGGACTGAACTCTG 59.755 60.000 0.00 0.00 0.00 3.35
2448 12737 1.536943 GCGAGGTGGGACTGAACTCT 61.537 60.000 0.00 0.00 0.00 3.24
2449 12738 1.079750 GCGAGGTGGGACTGAACTC 60.080 63.158 0.00 0.00 0.00 3.01
2450 12739 2.584391 GGCGAGGTGGGACTGAACT 61.584 63.158 0.00 0.00 0.00 3.01
2451 12740 2.047179 GGCGAGGTGGGACTGAAC 60.047 66.667 0.00 0.00 0.00 3.18
2452 12741 2.144078 TTGGCGAGGTGGGACTGAA 61.144 57.895 0.00 0.00 0.00 3.02
2453 12742 2.525629 TTGGCGAGGTGGGACTGA 60.526 61.111 0.00 0.00 0.00 3.41
2454 12743 2.358737 GTTGGCGAGGTGGGACTG 60.359 66.667 0.00 0.00 0.00 3.51
2455 12744 3.637273 GGTTGGCGAGGTGGGACT 61.637 66.667 0.00 0.00 0.00 3.85
2458 12747 4.323477 TTCGGTTGGCGAGGTGGG 62.323 66.667 0.00 0.00 0.00 4.61
2459 12748 2.742372 CTTCGGTTGGCGAGGTGG 60.742 66.667 0.00 0.00 0.00 4.61
2460 12749 2.742372 CCTTCGGTTGGCGAGGTG 60.742 66.667 0.00 0.00 0.00 4.00
2461 12750 4.016706 CCCTTCGGTTGGCGAGGT 62.017 66.667 0.00 0.00 0.00 3.85
2462 12751 4.016706 ACCCTTCGGTTGGCGAGG 62.017 66.667 0.00 0.00 40.58 4.63
2463 12752 2.742372 CACCCTTCGGTTGGCGAG 60.742 66.667 0.00 0.00 42.04 5.03
2466 12755 3.056328 GAGCACCCTTCGGTTGGC 61.056 66.667 0.00 0.00 42.04 4.52
2467 12756 1.966451 GTGAGCACCCTTCGGTTGG 60.966 63.158 0.00 0.00 42.04 3.77
2468 12757 1.227823 TGTGAGCACCCTTCGGTTG 60.228 57.895 0.00 0.00 42.04 3.77
2469 12758 1.227853 GTGTGAGCACCCTTCGGTT 60.228 57.895 0.00 0.00 42.04 4.44
2470 12759 2.426023 GTGTGAGCACCCTTCGGT 59.574 61.111 0.00 0.00 46.31 4.69
2478 12767 2.095372 GCTTATAAACCGGTGTGAGCAC 59.905 50.000 8.52 0.00 44.53 4.40
2479 12768 2.352388 GCTTATAAACCGGTGTGAGCA 58.648 47.619 8.52 0.00 0.00 4.26
2480 12769 1.669265 GGCTTATAAACCGGTGTGAGC 59.331 52.381 8.52 14.97 0.00 4.26
2481 12770 2.285977 GGGCTTATAAACCGGTGTGAG 58.714 52.381 8.52 5.04 0.00 3.51
2482 12771 1.405797 CGGGCTTATAAACCGGTGTGA 60.406 52.381 8.52 0.00 43.69 3.58
2483 12772 1.011333 CGGGCTTATAAACCGGTGTG 58.989 55.000 8.52 0.00 43.69 3.82
2484 12773 3.464207 CGGGCTTATAAACCGGTGT 57.536 52.632 8.52 4.57 43.69 4.16
2489 12778 1.767088 AGAGGGACGGGCTTATAAACC 59.233 52.381 0.00 0.00 0.00 3.27
2490 12779 2.699321 AGAGAGGGACGGGCTTATAAAC 59.301 50.000 0.00 0.00 0.00 2.01
2491 12780 2.698797 CAGAGAGGGACGGGCTTATAAA 59.301 50.000 0.00 0.00 0.00 1.40
2492 12781 2.317040 CAGAGAGGGACGGGCTTATAA 58.683 52.381 0.00 0.00 0.00 0.98
2493 12782 1.996798 CAGAGAGGGACGGGCTTATA 58.003 55.000 0.00 0.00 0.00 0.98
2494 12783 1.403687 GCAGAGAGGGACGGGCTTAT 61.404 60.000 0.00 0.00 0.00 1.73
2495 12784 2.058595 GCAGAGAGGGACGGGCTTA 61.059 63.158 0.00 0.00 0.00 3.09
2496 12785 3.394836 GCAGAGAGGGACGGGCTT 61.395 66.667 0.00 0.00 0.00 4.35
2499 12788 2.685380 AAGGCAGAGAGGGACGGG 60.685 66.667 0.00 0.00 0.00 5.28
2500 12789 1.831652 AACAAGGCAGAGAGGGACGG 61.832 60.000 0.00 0.00 0.00 4.79
2501 12790 0.671781 CAACAAGGCAGAGAGGGACG 60.672 60.000 0.00 0.00 0.00 4.79
2502 12791 0.687354 TCAACAAGGCAGAGAGGGAC 59.313 55.000 0.00 0.00 0.00 4.46
2503 12792 3.164024 TCAACAAGGCAGAGAGGGA 57.836 52.632 0.00 0.00 0.00 4.20


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.