Multiple sequence alignment - TraesCS5D01G026000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G026000 chr5D 100.000 4645 0 0 1 4645 23300425 23295781 0.000000e+00 8578.0
1 TraesCS5D01G026000 chr5D 79.074 583 57 30 1099 1671 555450131 555450658 1.600000e-89 340.0
2 TraesCS5D01G026000 chr5D 91.710 193 15 1 1 192 250587599 250587791 2.760000e-67 267.0
3 TraesCS5D01G026000 chr5D 96.364 55 2 0 4406 4460 23241166 23241112 1.780000e-14 91.6
4 TraesCS5D01G026000 chr5A 92.501 2067 105 24 2606 4645 17222727 17220684 0.000000e+00 2913.0
5 TraesCS5D01G026000 chr5A 82.824 1310 87 61 799 2041 17224442 17223204 0.000000e+00 1046.0
6 TraesCS5D01G026000 chr5A 89.022 501 33 10 2074 2573 17223203 17222724 6.650000e-168 601.0
7 TraesCS5D01G026000 chr5A 82.364 516 57 15 309 793 17225047 17224535 7.190000e-113 418.0
8 TraesCS5D01G026000 chr5A 92.268 194 14 1 1 193 584707884 584708077 1.650000e-69 274.0
9 TraesCS5D01G026000 chr5B 94.389 909 41 4 2085 2991 17546599 17545699 0.000000e+00 1387.0
10 TraesCS5D01G026000 chr5B 84.629 1106 54 48 977 2036 17547637 17546602 0.000000e+00 994.0
11 TraesCS5D01G026000 chr5B 80.973 946 56 45 3485 4412 17545198 17544359 1.820000e-178 636.0
12 TraesCS5D01G026000 chr5B 95.568 361 13 1 2988 3348 17545619 17545262 4.030000e-160 575.0
13 TraesCS5D01G026000 chr5B 84.876 443 42 11 4216 4645 17467516 17467086 1.550000e-114 424.0
14 TraesCS5D01G026000 chr5B 86.473 207 18 4 4443 4645 17544361 17544161 7.830000e-53 219.0
15 TraesCS5D01G026000 chr5B 85.333 150 17 3 4481 4630 17464542 17464398 2.900000e-32 150.0
16 TraesCS5D01G026000 chr1B 90.207 725 37 9 1010 1707 654382528 654383245 0.000000e+00 915.0
17 TraesCS5D01G026000 chr7B 90.000 490 28 8 1234 1707 703817594 703817110 8.540000e-172 614.0
18 TraesCS5D01G026000 chr7B 90.497 463 25 6 1258 1705 121028694 121028236 1.110000e-165 593.0
19 TraesCS5D01G026000 chr7B 79.832 357 47 15 1099 1449 78676380 78676717 2.160000e-58 237.0
20 TraesCS5D01G026000 chr7B 88.024 167 11 4 1547 1706 26716798 26716634 6.140000e-44 189.0
21 TraesCS5D01G026000 chr7B 90.588 85 5 2 1588 1671 623434473 623434391 4.910000e-20 110.0
22 TraesCS5D01G026000 chr6B 84.902 457 45 15 2262 2702 29785245 29784797 1.530000e-119 440.0
23 TraesCS5D01G026000 chr4D 82.268 485 52 16 1035 1505 400270851 400271315 5.640000e-104 388.0
24 TraesCS5D01G026000 chr4D 92.308 195 14 1 1 194 504225064 504225258 4.580000e-70 276.0
25 TraesCS5D01G026000 chr2D 79.281 584 54 31 1099 1671 197868956 197868429 3.440000e-91 346.0
26 TraesCS5D01G026000 chr2D 83.486 327 34 12 1001 1318 290559963 290559648 2.110000e-73 287.0
27 TraesCS5D01G026000 chr2D 91.795 195 15 1 1 194 80431894 80432088 2.130000e-68 270.0
28 TraesCS5D01G026000 chr2D 91.710 193 15 1 1 192 355407083 355406891 2.760000e-67 267.0
29 TraesCS5D01G026000 chr2D 90.588 85 5 2 1588 1671 646773407 646773325 4.910000e-20 110.0
30 TraesCS5D01G026000 chr2B 85.802 324 34 7 1001 1315 759162489 759162809 2.680000e-87 333.0
31 TraesCS5D01G026000 chr6D 93.367 196 10 3 1 194 269114523 269114329 2.110000e-73 287.0
32 TraesCS5D01G026000 chr6D 92.268 194 13 2 1 192 68050060 68050253 1.650000e-69 274.0
33 TraesCS5D01G026000 chr6D 91.710 193 15 1 1 192 110722893 110722701 2.760000e-67 267.0
34 TraesCS5D01G026000 chr3D 87.398 246 25 3 1001 1243 612659867 612660109 1.270000e-70 278.0
35 TraesCS5D01G026000 chr2A 92.746 193 13 1 1 192 700666063 700666255 1.270000e-70 278.0
36 TraesCS5D01G026000 chr4B 84.332 217 28 4 1040 1254 189738452 189738240 1.690000e-49 207.0
37 TraesCS5D01G026000 chrUn 87.356 174 17 2 4476 4645 305930098 305929926 1.320000e-45 195.0
38 TraesCS5D01G026000 chrUn 85.333 150 17 3 4481 4630 305927382 305927238 2.900000e-32 150.0
39 TraesCS5D01G026000 chr3A 85.475 179 20 4 1040 1216 645742638 645742464 1.030000e-41 182.0
40 TraesCS5D01G026000 chr6A 90.588 85 5 2 1588 1671 464309894 464309976 4.910000e-20 110.0
41 TraesCS5D01G026000 chr3B 90.588 85 5 2 1588 1671 570336787 570336869 4.910000e-20 110.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G026000 chr5D 23295781 23300425 4644 True 8578.0 8578 100.00000 1 4645 1 chr5D.!!$R2 4644
1 TraesCS5D01G026000 chr5D 555450131 555450658 527 False 340.0 340 79.07400 1099 1671 1 chr5D.!!$F2 572
2 TraesCS5D01G026000 chr5A 17220684 17225047 4363 True 1244.5 2913 86.67775 309 4645 4 chr5A.!!$R1 4336
3 TraesCS5D01G026000 chr5B 17544161 17547637 3476 True 762.2 1387 88.40640 977 4645 5 chr5B.!!$R2 3668
4 TraesCS5D01G026000 chr5B 17464398 17467516 3118 True 287.0 424 85.10450 4216 4645 2 chr5B.!!$R1 429
5 TraesCS5D01G026000 chr1B 654382528 654383245 717 False 915.0 915 90.20700 1010 1707 1 chr1B.!!$F1 697
6 TraesCS5D01G026000 chr2D 197868429 197868956 527 True 346.0 346 79.28100 1099 1671 1 chr2D.!!$R1 572

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
916 1035 0.030638 CACCCTTTTGCTCCAACACG 59.969 55.0 0.00 0.0 0.00 4.49 F
927 1046 0.031043 TCCAACACGAGTACACACGG 59.969 55.0 4.32 0.0 34.31 4.94 F
980 1107 0.255890 AACCAATCCACCCATCCGAG 59.744 55.0 0.00 0.0 0.00 4.63 F
1815 2020 1.069378 GTAAAGGCGGTGTCTCGTCG 61.069 60.0 0.00 0.0 40.01 5.12 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1815 2020 0.458025 GACGATTCTCCGTGGTGGAC 60.458 60.0 0.00 0.0 43.74 4.02 R
2533 2755 1.017177 TCCAGCGGCGTTTCATACAC 61.017 55.0 9.37 0.0 0.00 2.90 R
2544 2766 2.159085 ACAGTAACTTCTATCCAGCGGC 60.159 50.0 0.00 0.0 0.00 6.53 R
3800 4121 0.108615 CAGACTTCAGTACAGCGGGG 60.109 60.0 0.00 0.0 0.00 5.73 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 39 3.817787 GGAAACCCGCGTATTCCC 58.182 61.111 18.71 1.81 37.28 3.97
39 40 2.175621 GGAAACCCGCGTATTCCCG 61.176 63.158 18.71 0.00 37.28 5.14
40 41 2.125024 AAACCCGCGTATTCCCGG 60.125 61.111 4.92 0.00 43.97 5.73
45 46 3.637714 CGCGTATTCCCGGATTGG 58.362 61.111 0.73 0.00 37.55 3.16
56 57 3.725754 CGGATTGGGATCGGGATTT 57.274 52.632 0.00 0.00 32.84 2.17
57 58 1.981256 CGGATTGGGATCGGGATTTT 58.019 50.000 0.00 0.00 32.84 1.82
58 59 1.608590 CGGATTGGGATCGGGATTTTG 59.391 52.381 0.00 0.00 32.84 2.44
59 60 1.341209 GGATTGGGATCGGGATTTTGC 59.659 52.381 0.00 0.00 32.84 3.68
60 61 1.341209 GATTGGGATCGGGATTTTGCC 59.659 52.381 0.00 0.00 0.00 4.52
66 67 4.174129 CGGGATTTTGCCGCGTCC 62.174 66.667 4.92 3.64 46.11 4.79
67 68 3.822192 GGGATTTTGCCGCGTCCC 61.822 66.667 13.72 13.72 43.20 4.46
68 69 2.750237 GGATTTTGCCGCGTCCCT 60.750 61.111 4.92 0.00 0.00 4.20
69 70 2.761195 GGATTTTGCCGCGTCCCTC 61.761 63.158 4.92 0.00 0.00 4.30
70 71 2.033448 ATTTTGCCGCGTCCCTCA 59.967 55.556 4.92 0.00 0.00 3.86
71 72 1.582610 GATTTTGCCGCGTCCCTCAA 61.583 55.000 4.92 0.00 0.00 3.02
72 73 1.175983 ATTTTGCCGCGTCCCTCAAA 61.176 50.000 4.92 4.62 0.00 2.69
73 74 1.384989 TTTTGCCGCGTCCCTCAAAA 61.385 50.000 4.92 10.28 36.45 2.44
74 75 1.175983 TTTGCCGCGTCCCTCAAAAT 61.176 50.000 4.92 0.00 0.00 1.82
75 76 1.175983 TTGCCGCGTCCCTCAAAATT 61.176 50.000 4.92 0.00 0.00 1.82
76 77 1.175983 TGCCGCGTCCCTCAAAATTT 61.176 50.000 4.92 0.00 0.00 1.82
77 78 0.038618 GCCGCGTCCCTCAAAATTTT 60.039 50.000 4.92 0.00 0.00 1.82
78 79 1.604438 GCCGCGTCCCTCAAAATTTTT 60.604 47.619 4.92 0.00 0.00 1.94
108 109 2.989639 CAGGATGCGGGGTCTGAA 59.010 61.111 0.00 0.00 0.00 3.02
109 110 1.450312 CAGGATGCGGGGTCTGAAC 60.450 63.158 0.00 0.00 0.00 3.18
110 111 2.511600 GGATGCGGGGTCTGAACG 60.512 66.667 0.00 0.00 0.00 3.95
111 112 2.511600 GATGCGGGGTCTGAACGG 60.512 66.667 0.00 0.00 0.00 4.44
112 113 4.096003 ATGCGGGGTCTGAACGGG 62.096 66.667 0.00 0.00 0.00 5.28
115 116 4.760047 CGGGGTCTGAACGGGCAG 62.760 72.222 0.82 0.82 37.24 4.85
116 117 4.410400 GGGGTCTGAACGGGCAGG 62.410 72.222 6.90 0.00 36.55 4.85
117 118 3.637273 GGGTCTGAACGGGCAGGT 61.637 66.667 6.90 0.00 36.55 4.00
118 119 2.430367 GGTCTGAACGGGCAGGTT 59.570 61.111 6.90 0.00 36.55 3.50
119 120 1.228154 GGTCTGAACGGGCAGGTTT 60.228 57.895 6.90 0.00 36.55 3.27
120 121 0.822121 GGTCTGAACGGGCAGGTTTT 60.822 55.000 6.90 0.00 36.55 2.43
121 122 1.029681 GTCTGAACGGGCAGGTTTTT 58.970 50.000 6.90 0.00 36.55 1.94
136 137 2.521479 TTTTTGCCCCTACCCGCA 59.479 55.556 0.00 0.00 0.00 5.69
137 138 1.077625 TTTTTGCCCCTACCCGCAT 59.922 52.632 0.00 0.00 34.35 4.73
138 139 0.543174 TTTTTGCCCCTACCCGCATT 60.543 50.000 0.00 0.00 34.35 3.56
139 140 0.543174 TTTTGCCCCTACCCGCATTT 60.543 50.000 0.00 0.00 34.35 2.32
140 141 0.543174 TTTGCCCCTACCCGCATTTT 60.543 50.000 0.00 0.00 34.35 1.82
141 142 1.254284 TTGCCCCTACCCGCATTTTG 61.254 55.000 0.00 0.00 34.35 2.44
142 143 2.423064 GCCCCTACCCGCATTTTGG 61.423 63.158 0.00 0.00 0.00 3.28
143 144 2.423064 CCCCTACCCGCATTTTGGC 61.423 63.158 0.00 0.00 0.00 4.52
144 145 2.423064 CCCTACCCGCATTTTGGCC 61.423 63.158 0.00 0.00 0.00 5.36
145 146 2.770589 CCTACCCGCATTTTGGCCG 61.771 63.158 0.00 0.00 0.00 6.13
146 147 2.034376 TACCCGCATTTTGGCCGT 59.966 55.556 0.00 0.00 0.00 5.68
147 148 1.591504 CTACCCGCATTTTGGCCGTT 61.592 55.000 0.00 0.00 0.00 4.44
148 149 0.322277 TACCCGCATTTTGGCCGTTA 60.322 50.000 0.00 0.00 0.00 3.18
149 150 0.968393 ACCCGCATTTTGGCCGTTAT 60.968 50.000 0.00 0.00 0.00 1.89
150 151 0.174617 CCCGCATTTTGGCCGTTATT 59.825 50.000 0.00 0.00 0.00 1.40
151 152 1.404851 CCCGCATTTTGGCCGTTATTT 60.405 47.619 0.00 0.00 0.00 1.40
152 153 2.342179 CCGCATTTTGGCCGTTATTTT 58.658 42.857 0.00 0.00 0.00 1.82
153 154 3.512680 CCGCATTTTGGCCGTTATTTTA 58.487 40.909 0.00 0.00 0.00 1.52
154 155 3.304826 CCGCATTTTGGCCGTTATTTTAC 59.695 43.478 0.00 0.00 0.00 2.01
155 156 3.001562 CGCATTTTGGCCGTTATTTTACG 60.002 43.478 0.00 0.00 41.06 3.18
163 164 1.289276 CGTTATTTTACGGGTCGGGG 58.711 55.000 0.00 0.00 37.86 5.73
164 165 1.134848 CGTTATTTTACGGGTCGGGGA 60.135 52.381 0.00 0.00 37.86 4.81
165 166 2.279741 GTTATTTTACGGGTCGGGGAC 58.720 52.381 0.00 0.00 0.00 4.46
178 179 4.530857 GGGACGGATGCGGGTCTG 62.531 72.222 12.44 0.00 33.70 3.51
180 181 4.148825 GACGGATGCGGGTCTGCT 62.149 66.667 12.44 0.00 35.36 4.24
181 182 2.758327 ACGGATGCGGGTCTGCTA 60.758 61.111 12.44 0.00 35.36 3.49
182 183 2.028190 CGGATGCGGGTCTGCTAG 59.972 66.667 0.00 0.00 35.36 3.42
183 184 2.490148 CGGATGCGGGTCTGCTAGA 61.490 63.158 0.00 0.00 35.36 2.43
184 185 1.365633 GGATGCGGGTCTGCTAGAG 59.634 63.158 0.00 0.00 35.36 2.43
185 186 1.395826 GGATGCGGGTCTGCTAGAGT 61.396 60.000 0.00 0.00 35.36 3.24
186 187 0.461961 GATGCGGGTCTGCTAGAGTT 59.538 55.000 0.00 0.00 35.36 3.01
187 188 0.176680 ATGCGGGTCTGCTAGAGTTG 59.823 55.000 0.00 0.00 35.36 3.16
188 189 1.811679 GCGGGTCTGCTAGAGTTGC 60.812 63.158 0.00 0.00 0.00 4.17
189 190 1.893786 CGGGTCTGCTAGAGTTGCT 59.106 57.895 0.00 0.00 0.00 3.91
190 191 0.179124 CGGGTCTGCTAGAGTTGCTC 60.179 60.000 0.00 0.00 0.00 4.26
191 192 1.190643 GGGTCTGCTAGAGTTGCTCT 58.809 55.000 4.02 4.02 43.83 4.09
192 193 1.552792 GGGTCTGCTAGAGTTGCTCTT 59.447 52.381 3.87 0.00 41.50 2.85
193 194 2.761208 GGGTCTGCTAGAGTTGCTCTTA 59.239 50.000 3.87 0.00 41.50 2.10
194 195 3.429684 GGGTCTGCTAGAGTTGCTCTTAC 60.430 52.174 3.87 0.00 41.50 2.34
195 196 3.445805 GGTCTGCTAGAGTTGCTCTTACT 59.554 47.826 3.87 0.00 41.50 2.24
196 197 4.439563 GGTCTGCTAGAGTTGCTCTTACTC 60.440 50.000 3.87 0.00 41.50 2.59
197 198 4.156922 GTCTGCTAGAGTTGCTCTTACTCA 59.843 45.833 3.87 0.00 43.52 3.41
198 199 4.952957 TCTGCTAGAGTTGCTCTTACTCAT 59.047 41.667 3.87 0.00 43.52 2.90
199 200 5.420421 TCTGCTAGAGTTGCTCTTACTCATT 59.580 40.000 3.87 0.00 43.52 2.57
200 201 6.042638 TGCTAGAGTTGCTCTTACTCATTT 57.957 37.500 3.87 0.00 43.52 2.32
201 202 6.102663 TGCTAGAGTTGCTCTTACTCATTTC 58.897 40.000 3.87 0.00 43.52 2.17
202 203 6.102663 GCTAGAGTTGCTCTTACTCATTTCA 58.897 40.000 3.87 0.00 43.52 2.69
203 204 6.760770 GCTAGAGTTGCTCTTACTCATTTCAT 59.239 38.462 3.87 0.00 43.52 2.57
204 205 7.042791 GCTAGAGTTGCTCTTACTCATTTCATC 60.043 40.741 3.87 0.00 43.52 2.92
205 206 6.112058 AGAGTTGCTCTTACTCATTTCATCC 58.888 40.000 0.00 0.00 43.52 3.51
206 207 6.059787 AGTTGCTCTTACTCATTTCATCCT 57.940 37.500 0.00 0.00 0.00 3.24
207 208 7.124901 AGAGTTGCTCTTACTCATTTCATCCTA 59.875 37.037 0.00 0.00 43.52 2.94
208 209 7.271511 AGTTGCTCTTACTCATTTCATCCTAG 58.728 38.462 0.00 0.00 0.00 3.02
209 210 5.605534 TGCTCTTACTCATTTCATCCTAGC 58.394 41.667 0.00 0.00 0.00 3.42
210 211 4.994217 GCTCTTACTCATTTCATCCTAGCC 59.006 45.833 0.00 0.00 0.00 3.93
211 212 5.221621 GCTCTTACTCATTTCATCCTAGCCT 60.222 44.000 0.00 0.00 0.00 4.58
212 213 6.687647 GCTCTTACTCATTTCATCCTAGCCTT 60.688 42.308 0.00 0.00 0.00 4.35
213 214 7.200434 TCTTACTCATTTCATCCTAGCCTTT 57.800 36.000 0.00 0.00 0.00 3.11
214 215 8.319057 TCTTACTCATTTCATCCTAGCCTTTA 57.681 34.615 0.00 0.00 0.00 1.85
215 216 8.424918 TCTTACTCATTTCATCCTAGCCTTTAG 58.575 37.037 0.00 0.00 0.00 1.85
216 217 6.814954 ACTCATTTCATCCTAGCCTTTAGA 57.185 37.500 0.00 0.00 0.00 2.10
217 218 7.385894 ACTCATTTCATCCTAGCCTTTAGAT 57.614 36.000 0.00 0.00 0.00 1.98
218 219 7.222872 ACTCATTTCATCCTAGCCTTTAGATG 58.777 38.462 0.00 0.00 37.95 2.90
219 220 7.071698 ACTCATTTCATCCTAGCCTTTAGATGA 59.928 37.037 3.75 3.75 42.46 2.92
220 221 7.220030 TCATTTCATCCTAGCCTTTAGATGAC 58.780 38.462 6.61 0.00 43.51 3.06
221 222 6.814954 TTTCATCCTAGCCTTTAGATGACT 57.185 37.500 6.61 0.00 43.51 3.41
222 223 5.798125 TCATCCTAGCCTTTAGATGACTG 57.202 43.478 3.75 0.00 40.03 3.51
223 224 4.590647 TCATCCTAGCCTTTAGATGACTGG 59.409 45.833 3.75 0.00 40.03 4.00
224 225 3.995636 TCCTAGCCTTTAGATGACTGGT 58.004 45.455 0.00 0.00 0.00 4.00
225 226 5.138758 TCCTAGCCTTTAGATGACTGGTA 57.861 43.478 0.00 0.00 0.00 3.25
226 227 5.525484 TCCTAGCCTTTAGATGACTGGTAA 58.475 41.667 0.00 0.00 0.00 2.85
227 228 5.598830 TCCTAGCCTTTAGATGACTGGTAAG 59.401 44.000 0.00 0.00 0.00 2.34
228 229 4.143986 AGCCTTTAGATGACTGGTAAGC 57.856 45.455 0.00 0.00 0.00 3.09
229 230 3.118223 AGCCTTTAGATGACTGGTAAGCC 60.118 47.826 0.00 0.00 0.00 4.35
230 231 3.118223 GCCTTTAGATGACTGGTAAGCCT 60.118 47.826 0.00 0.00 35.27 4.58
231 232 4.446371 CCTTTAGATGACTGGTAAGCCTG 58.554 47.826 0.00 0.00 39.33 4.85
232 233 4.162320 CCTTTAGATGACTGGTAAGCCTGA 59.838 45.833 0.00 0.00 37.43 3.86
233 234 5.163258 CCTTTAGATGACTGGTAAGCCTGAT 60.163 44.000 0.00 0.00 37.43 2.90
234 235 3.834489 AGATGACTGGTAAGCCTGATG 57.166 47.619 0.00 0.00 37.43 3.07
235 236 2.158842 AGATGACTGGTAAGCCTGATGC 60.159 50.000 0.00 0.00 41.71 3.91
245 246 1.796796 GCCTGATGCTTCACGAACC 59.203 57.895 0.00 0.00 36.87 3.62
246 247 1.970917 GCCTGATGCTTCACGAACCG 61.971 60.000 0.00 0.00 36.87 4.44
247 248 0.670546 CCTGATGCTTCACGAACCGT 60.671 55.000 0.00 0.00 42.36 4.83
248 249 0.716108 CTGATGCTTCACGAACCGTC 59.284 55.000 0.00 0.00 38.32 4.79
259 260 0.636733 CGAACCGTCGGTACATTTCG 59.363 55.000 19.21 18.50 43.81 3.46
260 261 1.701704 GAACCGTCGGTACATTTCGT 58.298 50.000 19.21 0.00 33.12 3.85
261 262 2.061028 GAACCGTCGGTACATTTCGTT 58.939 47.619 19.21 0.00 33.12 3.85
262 263 1.421382 ACCGTCGGTACATTTCGTTG 58.579 50.000 17.19 0.00 32.11 4.10
263 264 1.269726 ACCGTCGGTACATTTCGTTGT 60.270 47.619 17.19 0.00 32.11 3.32
264 265 1.125384 CCGTCGGTACATTTCGTTGTG 59.875 52.381 2.08 0.00 0.00 3.33
265 266 1.788308 CGTCGGTACATTTCGTTGTGT 59.212 47.619 0.00 0.00 0.00 3.72
266 267 2.409244 CGTCGGTACATTTCGTTGTGTG 60.409 50.000 0.00 0.00 0.00 3.82
267 268 2.796031 GTCGGTACATTTCGTTGTGTGA 59.204 45.455 0.00 0.00 0.00 3.58
268 269 3.430895 GTCGGTACATTTCGTTGTGTGAT 59.569 43.478 0.00 0.00 0.00 3.06
269 270 3.676172 TCGGTACATTTCGTTGTGTGATC 59.324 43.478 0.00 0.00 0.00 2.92
270 271 3.430556 CGGTACATTTCGTTGTGTGATCA 59.569 43.478 0.00 0.00 0.00 2.92
271 272 4.084276 CGGTACATTTCGTTGTGTGATCAA 60.084 41.667 0.00 0.00 0.00 2.57
272 273 5.144359 GGTACATTTCGTTGTGTGATCAAC 58.856 41.667 0.00 0.00 42.67 3.18
273 274 4.891627 ACATTTCGTTGTGTGATCAACA 57.108 36.364 0.00 1.64 45.28 3.33
274 275 5.437289 ACATTTCGTTGTGTGATCAACAT 57.563 34.783 0.00 0.00 45.28 2.71
275 276 5.214417 ACATTTCGTTGTGTGATCAACATG 58.786 37.500 0.00 0.00 45.28 3.21
276 277 2.967459 TCGTTGTGTGATCAACATGC 57.033 45.000 0.00 1.08 45.28 4.06
277 278 1.535028 TCGTTGTGTGATCAACATGCC 59.465 47.619 0.00 0.00 45.28 4.40
278 279 1.266446 CGTTGTGTGATCAACATGCCA 59.734 47.619 0.00 0.00 45.28 4.92
279 280 2.287487 CGTTGTGTGATCAACATGCCAA 60.287 45.455 0.00 0.00 45.28 4.52
280 281 3.715495 GTTGTGTGATCAACATGCCAAA 58.285 40.909 0.00 0.00 44.65 3.28
281 282 4.309099 GTTGTGTGATCAACATGCCAAAT 58.691 39.130 0.00 0.00 44.65 2.32
282 283 5.468592 GTTGTGTGATCAACATGCCAAATA 58.531 37.500 0.00 0.00 44.65 1.40
283 284 5.918426 TGTGTGATCAACATGCCAAATAT 57.082 34.783 0.00 0.00 41.97 1.28
284 285 6.283544 TGTGTGATCAACATGCCAAATATT 57.716 33.333 0.00 0.00 41.97 1.28
285 286 7.401955 TGTGTGATCAACATGCCAAATATTA 57.598 32.000 0.00 0.00 41.97 0.98
286 287 7.834803 TGTGTGATCAACATGCCAAATATTAA 58.165 30.769 0.00 0.00 41.97 1.40
287 288 8.476447 TGTGTGATCAACATGCCAAATATTAAT 58.524 29.630 0.00 0.00 41.97 1.40
288 289 9.964303 GTGTGATCAACATGCCAAATATTAATA 57.036 29.630 0.00 0.00 41.97 0.98
296 297 8.956533 ACATGCCAAATATTAATAAAACCACC 57.043 30.769 0.00 0.00 0.00 4.61
297 298 7.708752 ACATGCCAAATATTAATAAAACCACCG 59.291 33.333 0.00 0.00 0.00 4.94
298 299 7.171630 TGCCAAATATTAATAAAACCACCGT 57.828 32.000 0.00 0.00 0.00 4.83
299 300 7.259161 TGCCAAATATTAATAAAACCACCGTC 58.741 34.615 0.00 0.00 0.00 4.79
300 301 7.122948 TGCCAAATATTAATAAAACCACCGTCT 59.877 33.333 0.00 0.00 0.00 4.18
301 302 8.623030 GCCAAATATTAATAAAACCACCGTCTA 58.377 33.333 0.00 0.00 0.00 2.59
306 307 7.854557 ATTAATAAAACCACCGTCTAGAACC 57.145 36.000 0.00 0.00 0.00 3.62
307 308 4.895668 ATAAAACCACCGTCTAGAACCA 57.104 40.909 0.00 0.00 0.00 3.67
321 322 7.494952 CCGTCTAGAACCATATATGATCGTAGA 59.505 40.741 14.54 14.63 45.75 2.59
332 333 1.132453 TGATCGTAGACTTGTGGAGCG 59.868 52.381 0.00 0.00 42.51 5.03
334 335 0.892358 TCGTAGACTTGTGGAGCGGT 60.892 55.000 0.00 0.00 0.00 5.68
336 337 1.200716 CGTAGACTTGTGGAGCGGTAA 59.799 52.381 0.00 0.00 0.00 2.85
346 347 1.412710 TGGAGCGGTAAGATGGATGAC 59.587 52.381 0.00 0.00 0.00 3.06
348 349 2.891580 GGAGCGGTAAGATGGATGACTA 59.108 50.000 0.00 0.00 0.00 2.59
350 351 4.705507 GGAGCGGTAAGATGGATGACTATA 59.294 45.833 0.00 0.00 0.00 1.31
351 352 5.393243 GGAGCGGTAAGATGGATGACTATAC 60.393 48.000 0.00 0.00 0.00 1.47
353 354 4.982999 CGGTAAGATGGATGACTATACCG 58.017 47.826 7.02 7.02 41.19 4.02
361 362 0.672342 ATGACTATACCGCCGTCCAC 59.328 55.000 0.00 0.00 0.00 4.02
400 401 1.087771 CCACGTGGAAAGGATACGGC 61.088 60.000 31.31 0.00 41.74 5.68
469 470 6.663734 AGGGTCTCCATTTATTTACAAGAGG 58.336 40.000 0.00 0.00 34.83 3.69
471 472 5.828328 GGTCTCCATTTATTTACAAGAGGGG 59.172 44.000 0.00 0.00 0.00 4.79
479 480 4.846168 ATTTACAAGAGGGGAGAGGAAC 57.154 45.455 0.00 0.00 0.00 3.62
484 485 3.519913 ACAAGAGGGGAGAGGAACATTAC 59.480 47.826 0.00 0.00 0.00 1.89
485 486 3.491766 AGAGGGGAGAGGAACATTACA 57.508 47.619 0.00 0.00 0.00 2.41
486 487 3.108376 AGAGGGGAGAGGAACATTACAC 58.892 50.000 0.00 0.00 0.00 2.90
531 534 0.871722 CGAAACCGAAGCAACCATCA 59.128 50.000 0.00 0.00 0.00 3.07
532 535 1.468520 CGAAACCGAAGCAACCATCAT 59.531 47.619 0.00 0.00 0.00 2.45
566 569 2.612567 CCGCGGCACTAGCAACAAA 61.613 57.895 14.67 0.00 44.61 2.83
567 570 1.154413 CGCGGCACTAGCAACAAAG 60.154 57.895 0.00 0.00 44.61 2.77
570 573 1.925946 GCGGCACTAGCAACAAAGTTG 60.926 52.381 5.56 5.56 44.61 3.16
594 597 4.528076 TTGAGATGTACTAGGAGAGGCT 57.472 45.455 0.00 0.00 0.00 4.58
603 606 5.890419 TGTACTAGGAGAGGCTAGGTAAAAC 59.110 44.000 0.00 0.00 0.00 2.43
604 607 5.209685 ACTAGGAGAGGCTAGGTAAAACT 57.790 43.478 0.00 0.00 0.00 2.66
606 609 4.340328 AGGAGAGGCTAGGTAAAACTCT 57.660 45.455 0.00 0.00 40.93 3.24
610 613 5.280062 GGAGAGGCTAGGTAAAACTCTTTGT 60.280 44.000 0.00 0.00 38.54 2.83
611 614 5.795972 AGAGGCTAGGTAAAACTCTTTGTC 58.204 41.667 0.00 0.00 35.10 3.18
629 659 1.410882 GTCCGAAGAGAGGGATGAAGG 59.589 57.143 0.00 0.00 34.25 3.46
636 666 5.396213 CGAAGAGAGGGATGAAGGAGAAATT 60.396 44.000 0.00 0.00 0.00 1.82
639 669 7.135591 AGAGAGGGATGAAGGAGAAATTAAG 57.864 40.000 0.00 0.00 0.00 1.85
642 672 5.444176 AGGGATGAAGGAGAAATTAAGCAG 58.556 41.667 0.00 0.00 0.00 4.24
665 695 7.151308 CAGCTCCTCCACTATCTATGTAAAAG 58.849 42.308 0.00 0.00 0.00 2.27
667 697 6.042208 GCTCCTCCACTATCTATGTAAAAGGT 59.958 42.308 0.00 0.00 0.00 3.50
668 698 7.232941 GCTCCTCCACTATCTATGTAAAAGGTA 59.767 40.741 0.00 0.00 0.00 3.08
669 699 8.707796 TCCTCCACTATCTATGTAAAAGGTAG 57.292 38.462 0.00 0.00 34.43 3.18
670 700 8.287350 TCCTCCACTATCTATGTAAAAGGTAGT 58.713 37.037 0.00 0.00 40.71 2.73
682 713 4.467198 AAAAGGTAGTGGTCGATTCGAT 57.533 40.909 12.54 0.00 38.42 3.59
683 714 5.587388 AAAAGGTAGTGGTCGATTCGATA 57.413 39.130 12.54 2.02 38.42 2.92
687 718 3.243301 GGTAGTGGTCGATTCGATAAGCA 60.243 47.826 12.54 3.05 38.42 3.91
704 735 7.710044 TCGATAAGCACCGGTAAAAATAATGTA 59.290 33.333 6.87 0.00 0.00 2.29
715 746 5.849357 AAAAATAATGTACACGACGCAGA 57.151 34.783 0.00 0.00 0.00 4.26
718 749 0.038618 AATGTACACGACGCAGAGCA 60.039 50.000 0.00 0.00 0.00 4.26
725 756 0.099613 ACGACGCAGAGCATAGACTG 59.900 55.000 0.00 0.00 37.22 3.51
762 793 2.823924 TTTCCGGTTGAGATTGACGA 57.176 45.000 0.00 0.00 0.00 4.20
777 808 6.414732 AGATTGACGAATTCTTTACCATCCA 58.585 36.000 3.52 0.00 0.00 3.41
816 934 3.467803 ACTGTAGAGTGGAAAGTGTTGC 58.532 45.455 0.00 0.00 0.00 4.17
825 943 1.538849 GGAAAGTGTTGCTTGGGCTTG 60.539 52.381 0.00 0.00 37.52 4.01
912 1031 0.758685 CCCACACCCTTTTGCTCCAA 60.759 55.000 0.00 0.00 0.00 3.53
916 1035 0.030638 CACCCTTTTGCTCCAACACG 59.969 55.000 0.00 0.00 0.00 4.49
917 1036 0.106918 ACCCTTTTGCTCCAACACGA 60.107 50.000 0.00 0.00 0.00 4.35
918 1037 0.593128 CCCTTTTGCTCCAACACGAG 59.407 55.000 0.00 0.00 0.00 4.18
919 1038 1.308998 CCTTTTGCTCCAACACGAGT 58.691 50.000 0.00 0.00 32.11 4.18
920 1039 2.489971 CCTTTTGCTCCAACACGAGTA 58.510 47.619 0.00 0.00 32.11 2.59
922 1041 2.605837 TTTGCTCCAACACGAGTACA 57.394 45.000 0.00 0.00 32.11 2.90
923 1042 1.860676 TTGCTCCAACACGAGTACAC 58.139 50.000 0.00 0.00 32.11 2.90
926 1045 1.405461 CTCCAACACGAGTACACACG 58.595 55.000 0.00 0.42 36.07 4.49
927 1046 0.031043 TCCAACACGAGTACACACGG 59.969 55.000 4.32 0.00 34.31 4.94
928 1047 1.554042 CCAACACGAGTACACACGGC 61.554 60.000 4.32 0.00 34.31 5.68
930 1049 0.596600 AACACGAGTACACACGGCAG 60.597 55.000 4.32 0.00 34.31 4.85
932 1051 2.049526 CGAGTACACACGGCAGCA 60.050 61.111 0.00 0.00 0.00 4.41
933 1052 2.088763 CGAGTACACACGGCAGCAG 61.089 63.158 0.00 0.00 0.00 4.24
934 1053 2.357517 AGTACACACGGCAGCAGC 60.358 61.111 0.00 0.00 41.10 5.25
935 1054 2.664851 GTACACACGGCAGCAGCA 60.665 61.111 2.65 0.00 44.61 4.41
936 1055 2.357396 TACACACGGCAGCAGCAG 60.357 61.111 2.65 0.52 44.61 4.24
979 1106 0.701731 AAACCAATCCACCCATCCGA 59.298 50.000 0.00 0.00 0.00 4.55
980 1107 0.255890 AACCAATCCACCCATCCGAG 59.744 55.000 0.00 0.00 0.00 4.63
982 1109 1.889105 CAATCCACCCATCCGAGCG 60.889 63.158 0.00 0.00 0.00 5.03
983 1110 2.063979 AATCCACCCATCCGAGCGA 61.064 57.895 0.00 0.00 0.00 4.93
984 1111 2.032860 AATCCACCCATCCGAGCGAG 62.033 60.000 0.00 0.00 0.00 5.03
1454 1627 3.790091 TCTGCAACTCTGATGATGCTAC 58.210 45.455 9.75 0.00 39.49 3.58
1455 1628 3.450096 TCTGCAACTCTGATGATGCTACT 59.550 43.478 9.75 0.00 39.49 2.57
1459 1632 4.505922 GCAACTCTGATGATGCTACTGTAC 59.494 45.833 0.00 0.00 35.93 2.90
1491 1664 1.691976 TCCGTCTCACCACATTCAGTT 59.308 47.619 0.00 0.00 0.00 3.16
1691 1876 5.534654 AGCTTATCTAGAGTCTAACCAGCAG 59.465 44.000 16.72 1.61 0.00 4.24
1815 2020 1.069378 GTAAAGGCGGTGTCTCGTCG 61.069 60.000 0.00 0.00 40.01 5.12
1834 2039 1.888018 TCCACCACGGAGAATCGTC 59.112 57.895 0.00 0.00 41.86 4.20
1885 2104 3.374984 GGATGGAGGTTAGGGGAACTAGA 60.375 52.174 0.00 0.00 38.21 2.43
1892 2111 6.045341 GGAGGTTAGGGGAACTAGATAGACTA 59.955 46.154 0.00 0.00 38.21 2.59
1924 2143 3.209410 GGGTTGACATGATGTGGAGATC 58.791 50.000 1.23 0.00 0.00 2.75
1939 2158 3.527253 TGGAGATCCAAGGGCTTGATTTA 59.473 43.478 0.00 0.00 44.35 1.40
1941 2160 4.582240 GGAGATCCAAGGGCTTGATTTAAG 59.418 45.833 0.00 0.00 42.93 1.85
1942 2161 5.440610 GAGATCCAAGGGCTTGATTTAAGA 58.559 41.667 0.00 0.00 42.93 2.10
1944 2163 4.380843 TCCAAGGGCTTGATTTAAGACA 57.619 40.909 0.00 0.00 46.91 3.41
1958 2178 7.220030 TGATTTAAGACAGATGGCTTCTATCC 58.780 38.462 3.70 0.00 39.76 2.59
1967 2187 6.162777 CAGATGGCTTCTATCCTAGCTTTAC 58.837 44.000 2.20 0.00 37.54 2.01
1991 2211 6.153680 ACTTAATTTGTGTTTCTGTTCCCACA 59.846 34.615 0.00 0.00 36.12 4.17
1992 2212 3.859411 TTTGTGTTTCTGTTCCCACAC 57.141 42.857 0.00 0.00 37.53 3.82
1993 2213 2.498644 TGTGTTTCTGTTCCCACACA 57.501 45.000 0.00 0.00 45.62 3.72
2037 2257 7.393216 AGAAATCATCCTCTATTGGTATGAGC 58.607 38.462 0.00 0.00 31.95 4.26
2041 2261 5.717178 TCATCCTCTATTGGTATGAGCCTAC 59.283 44.000 0.00 0.00 0.00 3.18
2043 2263 5.080337 TCCTCTATTGGTATGAGCCTACAG 58.920 45.833 0.00 0.00 0.00 2.74
2044 2264 4.322349 CCTCTATTGGTATGAGCCTACAGC 60.322 50.000 0.00 0.00 44.25 4.40
2070 2290 4.238514 GCTGGTAGTAGCTTAATGGATCG 58.761 47.826 0.00 0.00 40.52 3.69
2071 2291 4.238514 CTGGTAGTAGCTTAATGGATCGC 58.761 47.826 0.00 0.00 0.00 4.58
2072 2292 3.895656 TGGTAGTAGCTTAATGGATCGCT 59.104 43.478 0.00 0.00 36.56 4.93
2073 2293 4.238514 GGTAGTAGCTTAATGGATCGCTG 58.761 47.826 0.00 0.00 34.14 5.18
2074 2294 4.022242 GGTAGTAGCTTAATGGATCGCTGA 60.022 45.833 0.00 0.00 34.14 4.26
2075 2295 4.881019 AGTAGCTTAATGGATCGCTGAT 57.119 40.909 0.00 0.00 34.14 2.90
2076 2296 5.984695 AGTAGCTTAATGGATCGCTGATA 57.015 39.130 0.00 0.00 34.14 2.15
2077 2297 6.346477 AGTAGCTTAATGGATCGCTGATAA 57.654 37.500 0.00 0.00 34.14 1.75
2078 2298 6.393990 AGTAGCTTAATGGATCGCTGATAAG 58.606 40.000 0.00 0.94 34.14 1.73
2079 2299 5.474578 AGCTTAATGGATCGCTGATAAGA 57.525 39.130 0.00 0.00 0.00 2.10
2080 2300 6.047511 AGCTTAATGGATCGCTGATAAGAT 57.952 37.500 0.00 0.00 0.00 2.40
2081 2301 6.105333 AGCTTAATGGATCGCTGATAAGATC 58.895 40.000 0.00 0.00 41.73 2.75
2082 2302 6.070881 AGCTTAATGGATCGCTGATAAGATCT 60.071 38.462 0.00 0.00 42.02 2.75
2083 2303 6.593382 GCTTAATGGATCGCTGATAAGATCTT 59.407 38.462 13.56 13.56 42.02 2.40
2087 2307 6.214191 TGGATCGCTGATAAGATCTTATCC 57.786 41.667 36.06 27.48 46.64 2.59
2122 2343 7.886338 ACTTTATGGTCTTTTGTTTCTCATCC 58.114 34.615 0.00 0.00 0.00 3.51
2135 2356 5.598005 TGTTTCTCATCCCAGATGTTTGTTT 59.402 36.000 4.60 0.00 0.00 2.83
2203 2424 2.394632 TGGGCAATCTATGGTACGTCT 58.605 47.619 0.00 0.00 0.00 4.18
2204 2425 2.102420 TGGGCAATCTATGGTACGTCTG 59.898 50.000 0.00 0.00 0.00 3.51
2205 2426 2.364324 GGGCAATCTATGGTACGTCTGA 59.636 50.000 0.00 0.00 0.00 3.27
2206 2427 3.181469 GGGCAATCTATGGTACGTCTGAA 60.181 47.826 0.00 0.00 0.00 3.02
2207 2428 4.051922 GGCAATCTATGGTACGTCTGAAG 58.948 47.826 0.00 0.00 0.00 3.02
2208 2429 4.441634 GGCAATCTATGGTACGTCTGAAGT 60.442 45.833 0.00 1.21 0.00 3.01
2209 2430 4.740695 GCAATCTATGGTACGTCTGAAGTC 59.259 45.833 0.00 0.00 0.00 3.01
2265 2486 8.959548 TGCAGTTTATGTGACTGAATATGAAAT 58.040 29.630 8.33 0.00 45.72 2.17
2277 2499 9.630098 GACTGAATATGAAATTTTTGCTTCTGA 57.370 29.630 13.28 0.00 0.00 3.27
2305 2527 5.776744 ACCGATTCGTAACTAACACTTTCT 58.223 37.500 5.20 0.00 0.00 2.52
2306 2528 5.860716 ACCGATTCGTAACTAACACTTTCTC 59.139 40.000 5.20 0.00 0.00 2.87
2312 2534 7.473027 TCGTAACTAACACTTTCTCCTTTTG 57.527 36.000 0.00 0.00 0.00 2.44
2451 2673 4.505566 GGCCGCCCATATGATATGTATGAT 60.506 45.833 11.20 0.00 32.52 2.45
2466 2688 1.436326 ATGATGCAGCCCTCTCAGAT 58.564 50.000 0.00 0.00 0.00 2.90
2469 2691 1.690893 GATGCAGCCCTCTCAGATACA 59.309 52.381 0.00 0.00 0.00 2.29
2533 2755 8.777865 TGAAGAGATAAGTTACTGTGAAATGG 57.222 34.615 0.00 0.00 0.00 3.16
2544 2766 5.356882 ACTGTGAAATGGTGTATGAAACG 57.643 39.130 0.00 0.00 0.00 3.60
2567 2789 4.608951 CCGCTGGATAGAAGTTACTGTAC 58.391 47.826 0.00 0.00 0.00 2.90
2704 2926 3.243468 GGTATAGGACCTTTGACGAGCTC 60.243 52.174 2.73 2.73 45.89 4.09
2857 3079 2.611518 CTCACAAACATCCTCCGAGAC 58.388 52.381 0.00 0.00 0.00 3.36
2937 3159 5.063204 TGTCTCAGTAAGTTTTGGATGTGG 58.937 41.667 0.00 0.00 0.00 4.17
2979 3204 4.276926 ACACTCTGTCCTTTGAAATCTTGC 59.723 41.667 0.00 0.00 0.00 4.01
3157 3465 3.827876 TGGATGAAAATTGCAGCTCAAGA 59.172 39.130 0.00 0.00 38.22 3.02
3265 3573 0.548510 GGAGGAGGTTCATGAAGGGG 59.451 60.000 8.80 0.00 0.00 4.79
3295 3603 1.916697 GCGCCAGGCTCTTCTTTGAC 61.917 60.000 10.54 0.00 39.11 3.18
3399 3707 9.248291 GAGATGCTGTCAAACAAAATAAGAAAA 57.752 29.630 0.00 0.00 0.00 2.29
3400 3708 9.598517 AGATGCTGTCAAACAAAATAAGAAAAA 57.401 25.926 0.00 0.00 0.00 1.94
3435 3745 8.344831 GGGGCAAAATAAGAAAATTATCATTGC 58.655 33.333 15.56 15.56 36.92 3.56
3572 3882 0.100503 ACAACAACTTCACCAAGCGC 59.899 50.000 0.00 0.00 32.09 5.92
3740 4061 9.801873 ATGATTTTTGTTGGCTGTTGTATATAC 57.198 29.630 5.89 5.89 0.00 1.47
3766 4087 1.234821 ATATGTTTGCCATACGCCCG 58.765 50.000 0.00 0.00 38.83 6.13
3768 4089 4.187810 GTTTGCCATACGCCCGCC 62.188 66.667 0.00 0.00 36.24 6.13
3832 4154 5.003804 ACTGAAGTCTGAAACACTTGTTGT 58.996 37.500 0.00 0.00 41.74 3.32
3886 4213 7.035004 CCAGTTGAATGAAGAAGAAACAAACA 58.965 34.615 0.00 0.00 0.00 2.83
3917 4244 3.587061 TCCTAAAGAGCAGGACCATCAAA 59.413 43.478 0.00 0.00 37.27 2.69
3959 4286 4.077822 CACCTCTGCAAATCCTTTTCTCT 58.922 43.478 0.00 0.00 0.00 3.10
4036 4363 1.123861 ACTGAACCCAGAGCTGAGCA 61.124 55.000 7.39 0.00 43.02 4.26
4076 4403 5.186603 CCCTCTCTGATGCTGCTAATACATA 59.813 44.000 0.00 0.00 0.00 2.29
4077 4404 6.098679 CCTCTCTGATGCTGCTAATACATAC 58.901 44.000 0.00 0.00 0.00 2.39
4078 4405 6.294955 CCTCTCTGATGCTGCTAATACATACA 60.295 42.308 0.00 0.00 0.00 2.29
4079 4406 6.685657 TCTCTGATGCTGCTAATACATACAG 58.314 40.000 0.00 0.00 0.00 2.74
4080 4407 6.266330 TCTCTGATGCTGCTAATACATACAGT 59.734 38.462 0.00 0.00 32.65 3.55
4081 4408 7.448469 TCTCTGATGCTGCTAATACATACAGTA 59.552 37.037 0.00 0.00 37.06 2.74
4103 4430 3.117625 ACTCGATATGGGAGTCAGTGGTA 60.118 47.826 1.12 0.00 40.63 3.25
4170 4497 1.801913 CGGAGTTCGCCTCGAGTTG 60.802 63.158 12.31 3.07 41.46 3.16
4172 4499 0.319641 GGAGTTCGCCTCGAGTTGTT 60.320 55.000 12.31 0.00 41.46 2.83
4180 4507 1.810412 GCCTCGAGTTGTTGAACTGGT 60.810 52.381 12.31 0.00 42.80 4.00
4188 4515 2.948979 GTTGTTGAACTGGTGATGGTGA 59.051 45.455 0.00 0.00 0.00 4.02
4224 4551 1.592400 GCAAGTGTTGGCCAAGTGC 60.592 57.895 21.21 21.11 40.16 4.40
4263 4599 2.943690 GCTCAGCATCATCATCTTGTGT 59.056 45.455 0.00 0.00 0.00 3.72
4264 4600 3.242772 GCTCAGCATCATCATCTTGTGTG 60.243 47.826 0.00 0.00 0.00 3.82
4265 4601 3.939592 CTCAGCATCATCATCTTGTGTGT 59.060 43.478 0.00 0.00 0.00 3.72
4266 4602 3.687698 TCAGCATCATCATCTTGTGTGTG 59.312 43.478 0.00 0.00 0.00 3.82
4267 4603 3.687698 CAGCATCATCATCTTGTGTGTGA 59.312 43.478 0.00 0.00 0.00 3.58
4269 4605 3.064958 GCATCATCATCTTGTGTGTGAGG 59.935 47.826 0.00 0.00 32.59 3.86
4270 4606 2.703416 TCATCATCTTGTGTGTGAGGC 58.297 47.619 0.00 0.00 0.00 4.70
4314 4654 4.162690 GGCCTGCGGTCCTGTAGG 62.163 72.222 11.62 11.62 43.82 3.18
4342 4682 3.410631 TTTGGACGCTTTATGGACTCA 57.589 42.857 0.00 0.00 0.00 3.41
4351 4691 3.686128 CTTTATGGACTCAGTCGTCTCG 58.314 50.000 0.00 0.00 34.38 4.04
4479 4822 4.503469 TCAGGATGTGTTTGCAATGCAATT 60.503 37.500 22.04 4.68 42.51 2.32
4606 4953 1.259609 CCTCTGCATTTTCTTGCCCA 58.740 50.000 0.00 0.00 42.06 5.36
4640 4987 0.866427 TTTCGTTTTCGCCGTATGCA 59.134 45.000 0.00 0.00 43.73 3.96
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.817787 GGAATACGCGGGTTTCCC 58.182 61.111 23.61 14.50 41.09 3.97
21 22 2.175621 CGGGAATACGCGGGTTTCC 61.176 63.158 24.90 24.90 46.13 3.13
22 23 3.402185 CGGGAATACGCGGGTTTC 58.598 61.111 11.50 13.58 46.13 2.78
37 38 0.110486 AAATCCCGATCCCAATCCGG 59.890 55.000 0.00 0.00 33.11 5.14
38 39 1.608590 CAAAATCCCGATCCCAATCCG 59.391 52.381 0.00 0.00 0.00 4.18
39 40 1.341209 GCAAAATCCCGATCCCAATCC 59.659 52.381 0.00 0.00 0.00 3.01
40 41 1.341209 GGCAAAATCCCGATCCCAATC 59.659 52.381 0.00 0.00 0.00 2.67
41 42 1.413118 GGCAAAATCCCGATCCCAAT 58.587 50.000 0.00 0.00 0.00 3.16
42 43 2.894858 GGCAAAATCCCGATCCCAA 58.105 52.632 0.00 0.00 0.00 4.12
43 44 4.676363 GGCAAAATCCCGATCCCA 57.324 55.556 0.00 0.00 0.00 4.37
50 51 3.822192 GGGACGCGGCAAAATCCC 61.822 66.667 17.00 15.04 44.07 3.85
51 52 2.750237 AGGGACGCGGCAAAATCC 60.750 61.111 17.00 8.71 0.00 3.01
52 53 1.582610 TTGAGGGACGCGGCAAAATC 61.583 55.000 17.00 6.10 0.00 2.17
53 54 1.175983 TTTGAGGGACGCGGCAAAAT 61.176 50.000 17.00 0.00 0.00 1.82
54 55 1.384989 TTTTGAGGGACGCGGCAAAA 61.385 50.000 17.00 16.51 37.74 2.44
55 56 1.175983 ATTTTGAGGGACGCGGCAAA 61.176 50.000 17.00 5.38 0.00 3.68
56 57 1.175983 AATTTTGAGGGACGCGGCAA 61.176 50.000 17.00 5.37 0.00 4.52
57 58 1.175983 AAATTTTGAGGGACGCGGCA 61.176 50.000 17.00 0.00 0.00 5.69
58 59 0.038618 AAAATTTTGAGGGACGCGGC 60.039 50.000 12.47 7.53 0.00 6.53
59 60 2.432206 AAAAATTTTGAGGGACGCGG 57.568 45.000 12.47 0.00 0.00 6.46
89 90 4.864334 CAGACCCCGCATCCTGCC 62.864 72.222 0.00 0.00 41.12 4.85
90 91 3.329542 TTCAGACCCCGCATCCTGC 62.330 63.158 0.00 0.00 40.69 4.85
91 92 1.450312 GTTCAGACCCCGCATCCTG 60.450 63.158 0.00 0.00 0.00 3.86
92 93 2.990479 GTTCAGACCCCGCATCCT 59.010 61.111 0.00 0.00 0.00 3.24
93 94 2.511600 CGTTCAGACCCCGCATCC 60.512 66.667 0.00 0.00 0.00 3.51
94 95 2.511600 CCGTTCAGACCCCGCATC 60.512 66.667 0.00 0.00 0.00 3.91
95 96 4.096003 CCCGTTCAGACCCCGCAT 62.096 66.667 0.00 0.00 0.00 4.73
98 99 4.760047 CTGCCCGTTCAGACCCCG 62.760 72.222 0.00 0.00 36.19 5.73
99 100 4.410400 CCTGCCCGTTCAGACCCC 62.410 72.222 3.09 0.00 36.19 4.95
100 101 2.692273 AAACCTGCCCGTTCAGACCC 62.692 60.000 3.09 0.00 36.19 4.46
101 102 0.822121 AAAACCTGCCCGTTCAGACC 60.822 55.000 3.09 0.00 36.19 3.85
102 103 1.029681 AAAAACCTGCCCGTTCAGAC 58.970 50.000 3.09 0.00 36.19 3.51
103 104 3.505835 AAAAACCTGCCCGTTCAGA 57.494 47.368 3.09 0.00 36.19 3.27
119 120 0.543174 AATGCGGGTAGGGGCAAAAA 60.543 50.000 0.00 0.00 43.26 1.94
120 121 0.543174 AAATGCGGGTAGGGGCAAAA 60.543 50.000 0.00 0.00 43.26 2.44
121 122 0.543174 AAAATGCGGGTAGGGGCAAA 60.543 50.000 0.00 0.00 43.26 3.68
122 123 1.077625 AAAATGCGGGTAGGGGCAA 59.922 52.632 0.00 0.00 43.26 4.52
123 124 1.680651 CAAAATGCGGGTAGGGGCA 60.681 57.895 0.00 0.00 44.29 5.36
124 125 2.423064 CCAAAATGCGGGTAGGGGC 61.423 63.158 0.00 0.00 0.00 5.80
125 126 2.423064 GCCAAAATGCGGGTAGGGG 61.423 63.158 0.00 0.00 0.00 4.79
126 127 2.423064 GGCCAAAATGCGGGTAGGG 61.423 63.158 0.00 0.00 0.00 3.53
127 128 2.770589 CGGCCAAAATGCGGGTAGG 61.771 63.158 2.24 0.00 0.00 3.18
128 129 1.591504 AACGGCCAAAATGCGGGTAG 61.592 55.000 2.24 0.00 36.03 3.18
129 130 0.322277 TAACGGCCAAAATGCGGGTA 60.322 50.000 2.24 0.00 36.03 3.69
130 131 0.968393 ATAACGGCCAAAATGCGGGT 60.968 50.000 2.24 0.00 36.03 5.28
131 132 0.174617 AATAACGGCCAAAATGCGGG 59.825 50.000 2.24 0.00 36.03 6.13
132 133 2.003196 AAATAACGGCCAAAATGCGG 57.997 45.000 2.24 0.00 37.56 5.69
133 134 3.001562 CGTAAAATAACGGCCAAAATGCG 60.002 43.478 2.24 0.00 39.19 4.73
134 135 4.493074 CGTAAAATAACGGCCAAAATGC 57.507 40.909 2.24 0.00 39.19 3.56
144 145 1.134848 TCCCCGACCCGTAAAATAACG 60.135 52.381 0.00 0.00 42.49 3.18
145 146 2.279741 GTCCCCGACCCGTAAAATAAC 58.720 52.381 0.00 0.00 0.00 1.89
146 147 1.134848 CGTCCCCGACCCGTAAAATAA 60.135 52.381 0.00 0.00 35.63 1.40
147 148 0.459489 CGTCCCCGACCCGTAAAATA 59.541 55.000 0.00 0.00 35.63 1.40
148 149 1.218854 CGTCCCCGACCCGTAAAAT 59.781 57.895 0.00 0.00 35.63 1.82
149 150 2.656055 CGTCCCCGACCCGTAAAA 59.344 61.111 0.00 0.00 35.63 1.52
150 151 3.381136 CCGTCCCCGACCCGTAAA 61.381 66.667 0.00 0.00 35.63 2.01
151 152 3.660422 ATCCGTCCCCGACCCGTAA 62.660 63.158 0.00 0.00 35.63 3.18
152 153 4.127744 ATCCGTCCCCGACCCGTA 62.128 66.667 0.00 0.00 35.63 4.02
161 162 4.530857 CAGACCCGCATCCGTCCC 62.531 72.222 0.00 0.00 0.00 4.46
163 164 2.685387 CTAGCAGACCCGCATCCGTC 62.685 65.000 0.00 0.00 0.00 4.79
164 165 2.758327 TAGCAGACCCGCATCCGT 60.758 61.111 0.00 0.00 0.00 4.69
165 166 2.028190 CTAGCAGACCCGCATCCG 59.972 66.667 0.00 0.00 0.00 4.18
166 167 1.365633 CTCTAGCAGACCCGCATCC 59.634 63.158 0.00 0.00 0.00 3.51
167 168 0.461961 AACTCTAGCAGACCCGCATC 59.538 55.000 0.00 0.00 0.00 3.91
168 169 0.176680 CAACTCTAGCAGACCCGCAT 59.823 55.000 0.00 0.00 0.00 4.73
169 170 1.591703 CAACTCTAGCAGACCCGCA 59.408 57.895 0.00 0.00 0.00 5.69
170 171 1.811679 GCAACTCTAGCAGACCCGC 60.812 63.158 0.00 0.00 0.00 6.13
171 172 0.179124 GAGCAACTCTAGCAGACCCG 60.179 60.000 0.00 0.00 0.00 5.28
172 173 1.190643 AGAGCAACTCTAGCAGACCC 58.809 55.000 0.00 0.00 39.28 4.46
173 174 3.445805 AGTAAGAGCAACTCTAGCAGACC 59.554 47.826 0.00 0.00 40.28 3.85
174 175 4.156922 TGAGTAAGAGCAACTCTAGCAGAC 59.843 45.833 0.00 0.00 40.28 3.51
175 176 4.336280 TGAGTAAGAGCAACTCTAGCAGA 58.664 43.478 0.00 0.00 40.28 4.26
176 177 4.710423 TGAGTAAGAGCAACTCTAGCAG 57.290 45.455 0.00 0.00 40.28 4.24
177 178 5.667539 AATGAGTAAGAGCAACTCTAGCA 57.332 39.130 0.00 0.00 40.28 3.49
178 179 6.102663 TGAAATGAGTAAGAGCAACTCTAGC 58.897 40.000 0.00 0.00 40.28 3.42
179 180 7.437862 GGATGAAATGAGTAAGAGCAACTCTAG 59.562 40.741 0.00 0.00 40.28 2.43
180 181 7.124901 AGGATGAAATGAGTAAGAGCAACTCTA 59.875 37.037 0.00 0.00 40.28 2.43
181 182 6.070309 AGGATGAAATGAGTAAGAGCAACTCT 60.070 38.462 4.99 0.00 43.37 3.24
182 183 6.112058 AGGATGAAATGAGTAAGAGCAACTC 58.888 40.000 0.00 0.00 43.04 3.01
183 184 6.059787 AGGATGAAATGAGTAAGAGCAACT 57.940 37.500 0.00 0.00 0.00 3.16
184 185 6.018343 GCTAGGATGAAATGAGTAAGAGCAAC 60.018 42.308 0.00 0.00 0.00 4.17
185 186 6.051717 GCTAGGATGAAATGAGTAAGAGCAA 58.948 40.000 0.00 0.00 0.00 3.91
186 187 5.453903 GGCTAGGATGAAATGAGTAAGAGCA 60.454 44.000 0.00 0.00 0.00 4.26
187 188 4.994217 GGCTAGGATGAAATGAGTAAGAGC 59.006 45.833 0.00 0.00 0.00 4.09
188 189 6.418057 AGGCTAGGATGAAATGAGTAAGAG 57.582 41.667 0.00 0.00 0.00 2.85
189 190 6.814954 AAGGCTAGGATGAAATGAGTAAGA 57.185 37.500 0.00 0.00 0.00 2.10
190 191 8.424918 TCTAAAGGCTAGGATGAAATGAGTAAG 58.575 37.037 0.00 0.00 0.00 2.34
191 192 8.319057 TCTAAAGGCTAGGATGAAATGAGTAA 57.681 34.615 0.00 0.00 0.00 2.24
192 193 7.914427 TCTAAAGGCTAGGATGAAATGAGTA 57.086 36.000 0.00 0.00 0.00 2.59
193 194 6.814954 TCTAAAGGCTAGGATGAAATGAGT 57.185 37.500 0.00 0.00 0.00 3.41
194 195 7.387397 GTCATCTAAAGGCTAGGATGAAATGAG 59.613 40.741 20.53 0.00 43.70 2.90
195 196 7.071698 AGTCATCTAAAGGCTAGGATGAAATGA 59.928 37.037 20.53 4.93 43.70 2.57
196 197 7.172875 CAGTCATCTAAAGGCTAGGATGAAATG 59.827 40.741 20.53 18.32 43.70 2.32
197 198 7.222872 CAGTCATCTAAAGGCTAGGATGAAAT 58.777 38.462 20.53 13.50 43.70 2.17
198 199 6.408548 CCAGTCATCTAAAGGCTAGGATGAAA 60.409 42.308 20.53 5.55 43.70 2.69
199 200 5.070981 CCAGTCATCTAAAGGCTAGGATGAA 59.929 44.000 20.53 8.98 43.70 2.57
200 201 4.590647 CCAGTCATCTAAAGGCTAGGATGA 59.409 45.833 17.18 17.18 41.16 2.92
201 202 4.346418 ACCAGTCATCTAAAGGCTAGGATG 59.654 45.833 14.18 14.18 37.49 3.51
202 203 4.561752 ACCAGTCATCTAAAGGCTAGGAT 58.438 43.478 0.00 0.00 0.00 3.24
203 204 3.995636 ACCAGTCATCTAAAGGCTAGGA 58.004 45.455 0.00 0.00 0.00 2.94
204 205 5.740513 GCTTACCAGTCATCTAAAGGCTAGG 60.741 48.000 0.00 0.00 0.00 3.02
205 206 5.293560 GCTTACCAGTCATCTAAAGGCTAG 58.706 45.833 0.00 0.00 0.00 3.42
206 207 4.101119 GGCTTACCAGTCATCTAAAGGCTA 59.899 45.833 0.00 0.00 36.79 3.93
207 208 3.118223 GGCTTACCAGTCATCTAAAGGCT 60.118 47.826 0.00 0.00 36.79 4.58
208 209 3.118223 AGGCTTACCAGTCATCTAAAGGC 60.118 47.826 0.00 0.00 39.06 4.35
209 210 4.162320 TCAGGCTTACCAGTCATCTAAAGG 59.838 45.833 0.00 0.00 39.06 3.11
210 211 5.344743 TCAGGCTTACCAGTCATCTAAAG 57.655 43.478 0.00 0.00 39.06 1.85
211 212 5.674525 CATCAGGCTTACCAGTCATCTAAA 58.325 41.667 0.00 0.00 39.06 1.85
212 213 4.443457 GCATCAGGCTTACCAGTCATCTAA 60.443 45.833 0.00 0.00 40.25 2.10
213 214 3.070159 GCATCAGGCTTACCAGTCATCTA 59.930 47.826 0.00 0.00 40.25 1.98
214 215 2.158842 GCATCAGGCTTACCAGTCATCT 60.159 50.000 0.00 0.00 40.25 2.90
215 216 2.216898 GCATCAGGCTTACCAGTCATC 58.783 52.381 0.00 0.00 40.25 2.92
216 217 2.338577 GCATCAGGCTTACCAGTCAT 57.661 50.000 0.00 0.00 40.25 3.06
217 218 3.861341 GCATCAGGCTTACCAGTCA 57.139 52.632 0.00 0.00 40.25 3.41
227 228 1.796796 GGTTCGTGAAGCATCAGGC 59.203 57.895 6.76 0.00 40.44 4.85
228 229 0.670546 ACGGTTCGTGAAGCATCAGG 60.671 55.000 11.81 5.31 39.18 3.86
229 230 0.716108 GACGGTTCGTGAAGCATCAG 59.284 55.000 11.81 0.00 41.37 2.90
230 231 1.006825 CGACGGTTCGTGAAGCATCA 61.007 55.000 11.81 0.00 41.37 3.07
231 232 1.683790 CCGACGGTTCGTGAAGCATC 61.684 60.000 5.48 5.34 44.28 3.91
232 233 1.736645 CCGACGGTTCGTGAAGCAT 60.737 57.895 5.48 0.00 44.28 3.79
233 234 1.794151 TACCGACGGTTCGTGAAGCA 61.794 55.000 27.06 0.00 44.28 3.91
234 235 1.081242 TACCGACGGTTCGTGAAGC 60.081 57.895 27.06 1.79 44.28 3.86
235 236 0.040157 TGTACCGACGGTTCGTGAAG 60.040 55.000 27.06 0.00 44.28 3.02
236 237 0.597568 ATGTACCGACGGTTCGTGAA 59.402 50.000 27.06 2.13 44.28 3.18
237 238 0.597568 AATGTACCGACGGTTCGTGA 59.402 50.000 27.06 3.02 44.28 4.35
238 239 1.387756 GAAATGTACCGACGGTTCGTG 59.612 52.381 27.06 0.00 44.28 4.35
239 240 1.701704 GAAATGTACCGACGGTTCGT 58.298 50.000 27.06 18.90 44.28 3.85
240 241 0.636733 CGAAATGTACCGACGGTTCG 59.363 55.000 27.06 22.88 45.44 3.95
241 242 1.701704 ACGAAATGTACCGACGGTTC 58.298 50.000 27.06 21.01 37.09 3.62
242 243 1.794116 CAACGAAATGTACCGACGGTT 59.206 47.619 27.06 6.31 37.09 4.44
243 244 1.269726 ACAACGAAATGTACCGACGGT 60.270 47.619 25.14 25.14 40.16 4.83
244 245 1.125384 CACAACGAAATGTACCGACGG 59.875 52.381 13.61 13.61 30.84 4.79
245 246 1.788308 ACACAACGAAATGTACCGACG 59.212 47.619 0.00 0.00 30.84 5.12
246 247 2.796031 TCACACAACGAAATGTACCGAC 59.204 45.455 0.00 0.00 30.84 4.79
247 248 3.095102 TCACACAACGAAATGTACCGA 57.905 42.857 0.00 0.00 30.84 4.69
248 249 3.430556 TGATCACACAACGAAATGTACCG 59.569 43.478 0.00 0.00 30.84 4.02
249 250 5.144359 GTTGATCACACAACGAAATGTACC 58.856 41.667 0.00 0.00 40.17 3.34
259 260 3.367992 TTGGCATGTTGATCACACAAC 57.632 42.857 12.60 0.00 46.83 3.32
260 261 4.603989 ATTTGGCATGTTGATCACACAA 57.396 36.364 12.60 5.68 38.61 3.33
261 262 5.918426 ATATTTGGCATGTTGATCACACA 57.082 34.783 11.44 11.44 38.61 3.72
262 263 8.876275 ATTAATATTTGGCATGTTGATCACAC 57.124 30.769 0.00 0.00 38.61 3.82
270 271 9.389755 GGTGGTTTTATTAATATTTGGCATGTT 57.610 29.630 0.00 0.00 0.00 2.71
271 272 7.708752 CGGTGGTTTTATTAATATTTGGCATGT 59.291 33.333 0.00 0.00 0.00 3.21
272 273 7.708752 ACGGTGGTTTTATTAATATTTGGCATG 59.291 33.333 0.00 0.00 0.00 4.06
273 274 7.787028 ACGGTGGTTTTATTAATATTTGGCAT 58.213 30.769 0.00 0.00 0.00 4.40
274 275 7.122948 AGACGGTGGTTTTATTAATATTTGGCA 59.877 33.333 0.00 0.00 0.00 4.92
275 276 7.485810 AGACGGTGGTTTTATTAATATTTGGC 58.514 34.615 0.00 0.00 0.00 4.52
280 281 9.551734 GGTTCTAGACGGTGGTTTTATTAATAT 57.448 33.333 0.00 0.00 0.00 1.28
281 282 8.538701 TGGTTCTAGACGGTGGTTTTATTAATA 58.461 33.333 0.00 0.00 0.00 0.98
282 283 7.396418 TGGTTCTAGACGGTGGTTTTATTAAT 58.604 34.615 0.00 0.00 0.00 1.40
283 284 6.767456 TGGTTCTAGACGGTGGTTTTATTAA 58.233 36.000 0.00 0.00 0.00 1.40
284 285 6.357579 TGGTTCTAGACGGTGGTTTTATTA 57.642 37.500 0.00 0.00 0.00 0.98
285 286 5.231702 TGGTTCTAGACGGTGGTTTTATT 57.768 39.130 0.00 0.00 0.00 1.40
286 287 4.895668 TGGTTCTAGACGGTGGTTTTAT 57.104 40.909 0.00 0.00 0.00 1.40
287 288 4.895668 ATGGTTCTAGACGGTGGTTTTA 57.104 40.909 0.00 0.00 0.00 1.52
288 289 3.782656 ATGGTTCTAGACGGTGGTTTT 57.217 42.857 0.00 0.00 0.00 2.43
289 290 6.325545 TCATATATGGTTCTAGACGGTGGTTT 59.674 38.462 12.78 0.00 0.00 3.27
290 291 5.836898 TCATATATGGTTCTAGACGGTGGTT 59.163 40.000 12.78 0.00 0.00 3.67
291 292 5.391256 TCATATATGGTTCTAGACGGTGGT 58.609 41.667 12.78 0.00 0.00 4.16
292 293 5.977489 TCATATATGGTTCTAGACGGTGG 57.023 43.478 12.78 0.00 0.00 4.61
293 294 6.127980 ACGATCATATATGGTTCTAGACGGTG 60.128 42.308 12.78 0.00 0.00 4.94
294 295 5.944599 ACGATCATATATGGTTCTAGACGGT 59.055 40.000 12.78 1.31 0.00 4.83
295 296 6.438259 ACGATCATATATGGTTCTAGACGG 57.562 41.667 12.78 0.79 0.00 4.79
296 297 8.329583 GTCTACGATCATATATGGTTCTAGACG 58.670 40.741 18.86 11.93 0.00 4.18
297 298 9.386010 AGTCTACGATCATATATGGTTCTAGAC 57.614 37.037 22.43 22.43 31.99 2.59
298 299 9.961264 AAGTCTACGATCATATATGGTTCTAGA 57.039 33.333 12.78 10.22 0.00 2.43
299 300 9.995957 CAAGTCTACGATCATATATGGTTCTAG 57.004 37.037 12.78 8.30 0.00 2.43
300 301 9.516546 ACAAGTCTACGATCATATATGGTTCTA 57.483 33.333 12.78 0.00 0.00 2.10
301 302 8.300286 CACAAGTCTACGATCATATATGGTTCT 58.700 37.037 12.78 0.00 0.00 3.01
302 303 7.542477 CCACAAGTCTACGATCATATATGGTTC 59.458 40.741 12.78 9.15 0.00 3.62
303 304 7.232737 TCCACAAGTCTACGATCATATATGGTT 59.767 37.037 12.78 1.09 0.00 3.67
304 305 6.719829 TCCACAAGTCTACGATCATATATGGT 59.280 38.462 12.78 5.41 0.00 3.55
305 306 7.158099 TCCACAAGTCTACGATCATATATGG 57.842 40.000 12.78 0.00 0.00 2.74
306 307 6.749578 GCTCCACAAGTCTACGATCATATATG 59.250 42.308 6.36 6.36 0.00 1.78
307 308 6.403746 CGCTCCACAAGTCTACGATCATATAT 60.404 42.308 0.00 0.00 0.00 0.86
321 322 1.066143 CCATCTTACCGCTCCACAAGT 60.066 52.381 0.00 0.00 0.00 3.16
332 333 4.381718 GGCGGTATAGTCATCCATCTTACC 60.382 50.000 0.00 0.00 0.00 2.85
334 335 3.442625 CGGCGGTATAGTCATCCATCTTA 59.557 47.826 0.00 0.00 0.00 2.10
336 337 1.819288 CGGCGGTATAGTCATCCATCT 59.181 52.381 0.00 0.00 0.00 2.90
346 347 2.354305 GCGTGGACGGCGGTATAG 60.354 66.667 13.24 0.15 40.23 1.31
361 362 0.824109 TCATCTAGGACCACAAGGCG 59.176 55.000 0.00 0.00 39.06 5.52
384 385 0.870307 CGAGCCGTATCCTTTCCACG 60.870 60.000 0.00 0.00 35.50 4.94
421 422 7.441157 CCTTTGGACTCCAATTTTTAAGGAAAC 59.559 37.037 15.13 0.00 43.55 2.78
424 425 5.542251 CCCTTTGGACTCCAATTTTTAAGGA 59.458 40.000 19.59 0.66 43.55 3.36
425 426 5.306937 ACCCTTTGGACTCCAATTTTTAAGG 59.693 40.000 11.47 12.91 43.55 2.69
429 430 4.556697 AGACCCTTTGGACTCCAATTTTT 58.443 39.130 11.47 0.00 43.55 1.94
440 441 6.795590 TGTAAATAAATGGAGACCCTTTGGA 58.204 36.000 0.00 0.00 34.81 3.53
456 457 5.788533 TGTTCCTCTCCCCTCTTGTAAATAA 59.211 40.000 0.00 0.00 0.00 1.40
469 470 7.696992 TTTAATTGTGTAATGTTCCTCTCCC 57.303 36.000 0.00 0.00 0.00 4.30
510 513 1.265905 GATGGTTGCTTCGGTTTCGTT 59.734 47.619 0.00 0.00 37.69 3.85
515 518 1.176527 CCATGATGGTTGCTTCGGTT 58.823 50.000 2.54 0.00 31.35 4.44
531 534 1.221840 GGTGCTCGACATGTCCCAT 59.778 57.895 20.03 0.00 0.00 4.00
532 535 2.662596 GGTGCTCGACATGTCCCA 59.337 61.111 20.03 11.67 0.00 4.37
548 551 2.513065 CTTTGTTGCTAGTGCCGCGG 62.513 60.000 24.05 24.05 38.71 6.46
566 569 7.310113 CCTCTCCTAGTACATCTCAAAACAACT 60.310 40.741 0.00 0.00 0.00 3.16
567 570 6.814146 CCTCTCCTAGTACATCTCAAAACAAC 59.186 42.308 0.00 0.00 0.00 3.32
570 573 5.128008 AGCCTCTCCTAGTACATCTCAAAAC 59.872 44.000 0.00 0.00 0.00 2.43
577 580 4.376225 ACCTAGCCTCTCCTAGTACATC 57.624 50.000 0.00 0.00 34.34 3.06
581 584 6.160105 AGAGTTTTACCTAGCCTCTCCTAGTA 59.840 42.308 0.00 0.00 34.34 1.82
583 586 5.451354 AGAGTTTTACCTAGCCTCTCCTAG 58.549 45.833 0.00 0.00 35.62 3.02
585 588 4.340328 AGAGTTTTACCTAGCCTCTCCT 57.660 45.455 0.00 0.00 0.00 3.69
586 589 5.179533 CAAAGAGTTTTACCTAGCCTCTCC 58.820 45.833 0.00 0.00 31.52 3.71
587 590 5.795972 ACAAAGAGTTTTACCTAGCCTCTC 58.204 41.667 0.00 0.00 31.52 3.20
588 591 5.280062 GGACAAAGAGTTTTACCTAGCCTCT 60.280 44.000 0.00 0.00 34.07 3.69
594 597 6.409524 TCTTCGGACAAAGAGTTTTACCTA 57.590 37.500 0.00 0.00 31.71 3.08
604 607 2.304221 TCCCTCTCTTCGGACAAAGA 57.696 50.000 0.00 0.00 34.22 2.52
606 609 2.536066 TCATCCCTCTCTTCGGACAAA 58.464 47.619 0.00 0.00 0.00 2.83
610 613 1.288037 TCCTTCATCCCTCTCTTCGGA 59.712 52.381 0.00 0.00 0.00 4.55
611 614 1.686052 CTCCTTCATCCCTCTCTTCGG 59.314 57.143 0.00 0.00 0.00 4.30
618 621 5.440610 TGCTTAATTTCTCCTTCATCCCTC 58.559 41.667 0.00 0.00 0.00 4.30
620 623 4.037327 GCTGCTTAATTTCTCCTTCATCCC 59.963 45.833 0.00 0.00 0.00 3.85
621 624 4.886489 AGCTGCTTAATTTCTCCTTCATCC 59.114 41.667 0.00 0.00 0.00 3.51
622 625 5.008514 GGAGCTGCTTAATTTCTCCTTCATC 59.991 44.000 2.53 0.00 40.02 2.92
629 659 3.625313 GTGGAGGAGCTGCTTAATTTCTC 59.375 47.826 9.91 4.84 0.00 2.87
636 666 3.320610 AGATAGTGGAGGAGCTGCTTA 57.679 47.619 9.91 0.00 0.00 3.09
639 669 2.896685 ACATAGATAGTGGAGGAGCTGC 59.103 50.000 0.00 0.00 0.00 5.25
642 672 6.042208 ACCTTTTACATAGATAGTGGAGGAGC 59.958 42.308 0.00 0.00 0.00 4.70
665 695 3.243301 TGCTTATCGAATCGACCACTACC 60.243 47.826 7.77 0.00 39.18 3.18
667 697 3.243301 GGTGCTTATCGAATCGACCACTA 60.243 47.826 7.77 0.00 39.18 2.74
668 698 2.481449 GGTGCTTATCGAATCGACCACT 60.481 50.000 7.77 0.00 39.18 4.00
669 699 1.859080 GGTGCTTATCGAATCGACCAC 59.141 52.381 7.77 12.40 39.18 4.16
670 700 1.535226 CGGTGCTTATCGAATCGACCA 60.535 52.381 7.77 0.12 39.18 4.02
671 701 1.129326 CGGTGCTTATCGAATCGACC 58.871 55.000 7.77 2.95 39.18 4.79
682 713 7.412781 CGTGTACATTATTTTTACCGGTGCTTA 60.413 37.037 19.93 0.00 0.00 3.09
683 714 6.614160 GTGTACATTATTTTTACCGGTGCTT 58.386 36.000 19.93 0.00 0.00 3.91
687 718 5.062058 CGTCGTGTACATTATTTTTACCGGT 59.938 40.000 13.98 13.98 0.00 5.28
704 735 0.179161 GTCTATGCTCTGCGTCGTGT 60.179 55.000 0.00 0.00 0.00 4.49
718 749 4.202357 TGAAGACACAACTTGGCAGTCTAT 60.202 41.667 5.40 0.00 38.51 1.98
725 756 4.051237 GGAAAATGAAGACACAACTTGGC 58.949 43.478 0.00 0.00 0.00 4.52
732 763 3.546724 TCAACCGGAAAATGAAGACACA 58.453 40.909 9.46 0.00 0.00 3.72
762 793 5.831103 ACTGGATGTGGATGGTAAAGAATT 58.169 37.500 0.00 0.00 0.00 2.17
793 824 4.686554 GCAACACTTTCCACTCTACAGTAG 59.313 45.833 0.47 0.47 0.00 2.57
794 825 4.344102 AGCAACACTTTCCACTCTACAGTA 59.656 41.667 0.00 0.00 0.00 2.74
795 826 3.134804 AGCAACACTTTCCACTCTACAGT 59.865 43.478 0.00 0.00 0.00 3.55
796 827 3.733337 AGCAACACTTTCCACTCTACAG 58.267 45.455 0.00 0.00 0.00 2.74
797 828 3.838244 AGCAACACTTTCCACTCTACA 57.162 42.857 0.00 0.00 0.00 2.74
866 984 4.807039 TAAACGGGGCGCTCGAGC 62.807 66.667 27.64 27.64 37.78 5.03
867 985 1.293267 TTTTAAACGGGGCGCTCGAG 61.293 55.000 24.91 8.45 0.00 4.04
868 986 1.293267 CTTTTAAACGGGGCGCTCGA 61.293 55.000 24.91 5.35 0.00 4.04
869 987 1.133869 CTTTTAAACGGGGCGCTCG 59.866 57.895 18.72 18.72 0.00 5.03
870 988 1.154093 GCTTTTAAACGGGGCGCTC 60.154 57.895 7.64 1.18 0.00 5.03
871 989 2.632544 GGCTTTTAAACGGGGCGCT 61.633 57.895 7.64 0.00 0.00 5.92
872 990 2.126228 GGCTTTTAAACGGGGCGC 60.126 61.111 0.00 0.00 0.00 6.53
873 991 2.207788 CTGGGCTTTTAAACGGGGCG 62.208 60.000 0.00 0.00 0.00 6.13
874 992 1.589630 CTGGGCTTTTAAACGGGGC 59.410 57.895 0.00 0.00 0.00 5.80
875 993 1.589630 GCTGGGCTTTTAAACGGGG 59.410 57.895 0.00 0.00 0.00 5.73
879 997 1.044611 TGTGGGCTGGGCTTTTAAAC 58.955 50.000 0.00 0.00 0.00 2.01
912 1031 1.007734 CTGCCGTGTGTACTCGTGT 60.008 57.895 5.86 0.00 0.00 4.49
916 1035 2.383527 GCTGCTGCCGTGTGTACTC 61.384 63.158 3.85 0.00 0.00 2.59
917 1036 2.357517 GCTGCTGCCGTGTGTACT 60.358 61.111 3.85 0.00 0.00 2.73
918 1037 2.664851 TGCTGCTGCCGTGTGTAC 60.665 61.111 13.47 0.00 38.71 2.90
919 1038 2.357396 CTGCTGCTGCCGTGTGTA 60.357 61.111 13.47 0.00 38.71 2.90
930 1049 4.146075 AGAGAGGCGAGCTGCTGC 62.146 66.667 7.01 11.17 45.43 5.25
932 1051 2.044053 AGAGAGAGGCGAGCTGCT 60.044 61.111 0.00 0.00 45.43 4.24
933 1052 2.412937 GAGAGAGAGGCGAGCTGC 59.587 66.667 0.00 0.00 45.38 5.25
934 1053 2.047151 GACGAGAGAGAGGCGAGCTG 62.047 65.000 0.00 0.00 0.00 4.24
935 1054 1.817941 GACGAGAGAGAGGCGAGCT 60.818 63.158 0.00 0.00 0.00 4.09
936 1055 2.713154 GACGAGAGAGAGGCGAGC 59.287 66.667 0.00 0.00 0.00 5.03
937 1056 2.184167 GGGACGAGAGAGAGGCGAG 61.184 68.421 0.00 0.00 0.00 5.03
938 1057 2.124653 GGGACGAGAGAGAGGCGA 60.125 66.667 0.00 0.00 0.00 5.54
939 1058 2.438614 TGGGACGAGAGAGAGGCG 60.439 66.667 0.00 0.00 0.00 5.52
1454 1627 4.158025 AGACGGATGGTTCAACTAGTACAG 59.842 45.833 0.00 0.00 0.00 2.74
1455 1628 4.084287 AGACGGATGGTTCAACTAGTACA 58.916 43.478 0.00 0.00 0.00 2.90
1459 1632 3.512680 GTGAGACGGATGGTTCAACTAG 58.487 50.000 0.00 0.00 0.00 2.57
1491 1664 7.149047 CGCTTAAATTACTCGTTGCAATTTTGA 60.149 33.333 0.59 0.00 34.57 2.69
1691 1876 9.125906 CTTTTATATCCGTGTATGTACTACAGC 57.874 37.037 5.69 0.00 40.99 4.40
1815 2020 0.458025 GACGATTCTCCGTGGTGGAC 60.458 60.000 0.00 0.00 43.74 4.02
1885 2104 2.225805 ACCCCACCACCAACTAGTCTAT 60.226 50.000 0.00 0.00 0.00 1.98
1892 2111 1.229076 GTCAACCCCACCACCAACT 59.771 57.895 0.00 0.00 0.00 3.16
1924 2143 4.335416 TCTGTCTTAAATCAAGCCCTTGG 58.665 43.478 8.06 0.00 40.78 3.61
1927 2146 4.530875 CCATCTGTCTTAAATCAAGCCCT 58.469 43.478 0.00 0.00 33.94 5.19
1939 2158 4.283212 GCTAGGATAGAAGCCATCTGTCTT 59.717 45.833 11.83 8.20 43.68 3.01
1941 2160 3.831911 AGCTAGGATAGAAGCCATCTGTC 59.168 47.826 5.58 5.58 42.77 3.51
1942 2161 3.855668 AGCTAGGATAGAAGCCATCTGT 58.144 45.455 0.02 0.00 42.77 3.41
1944 2163 6.081356 AGTAAAGCTAGGATAGAAGCCATCT 58.919 40.000 0.00 0.00 42.77 2.90
1967 2187 6.475402 GTGTGGGAACAGAAACACAAATTAAG 59.525 38.462 0.00 0.00 44.41 1.85
1991 2211 6.611613 TCTCACAAGTTAAGAGATCCATGT 57.388 37.500 3.09 0.00 33.75 3.21
1992 2212 7.912056 TTTCTCACAAGTTAAGAGATCCATG 57.088 36.000 7.13 0.00 38.14 3.66
1993 2213 8.324306 TGATTTCTCACAAGTTAAGAGATCCAT 58.676 33.333 7.13 2.18 38.14 3.41
2005 2225 7.052873 CCAATAGAGGATGATTTCTCACAAGT 58.947 38.462 0.00 0.00 33.22 3.16
2048 2268 4.238514 CGATCCATTAAGCTACTACCAGC 58.761 47.826 0.00 0.00 42.12 4.85
2051 2271 4.022242 TCAGCGATCCATTAAGCTACTACC 60.022 45.833 0.00 0.00 37.94 3.18
2052 2272 5.122512 TCAGCGATCCATTAAGCTACTAC 57.877 43.478 0.00 0.00 37.94 2.73
2054 2274 4.881019 ATCAGCGATCCATTAAGCTACT 57.119 40.909 0.00 0.00 37.94 2.57
2055 2275 6.390721 TCTTATCAGCGATCCATTAAGCTAC 58.609 40.000 0.00 0.00 37.94 3.58
2056 2276 6.590234 TCTTATCAGCGATCCATTAAGCTA 57.410 37.500 0.00 0.00 37.94 3.32
2057 2277 5.474578 TCTTATCAGCGATCCATTAAGCT 57.525 39.130 0.00 0.00 41.07 3.74
2058 2278 6.105333 AGATCTTATCAGCGATCCATTAAGC 58.895 40.000 0.00 0.00 37.37 3.09
2059 2279 9.814899 ATAAGATCTTATCAGCGATCCATTAAG 57.185 33.333 20.20 0.00 37.37 1.85
2060 2280 9.809096 GATAAGATCTTATCAGCGATCCATTAA 57.191 33.333 35.25 7.63 46.51 1.40
2073 2293 8.077386 AGTCGACTTTTCGGATAAGATCTTATC 58.923 37.037 33.70 33.70 46.53 1.75
2074 2294 7.942990 AGTCGACTTTTCGGATAAGATCTTAT 58.057 34.615 24.82 24.82 45.90 1.73
2075 2295 7.330900 AGTCGACTTTTCGGATAAGATCTTA 57.669 36.000 17.32 17.32 45.90 2.10
2076 2296 6.210287 AGTCGACTTTTCGGATAAGATCTT 57.790 37.500 13.58 13.56 45.90 2.40
2077 2297 5.838531 AGTCGACTTTTCGGATAAGATCT 57.161 39.130 13.58 0.00 45.90 2.75
2078 2298 6.889019 AAAGTCGACTTTTCGGATAAGATC 57.111 37.500 32.60 7.58 43.07 2.75
2079 2299 7.438459 CCATAAAGTCGACTTTTCGGATAAGAT 59.562 37.037 39.66 24.30 43.07 2.40
2080 2300 6.755141 CCATAAAGTCGACTTTTCGGATAAGA 59.245 38.462 39.66 23.32 43.07 2.10
2081 2301 6.534079 ACCATAAAGTCGACTTTTCGGATAAG 59.466 38.462 38.62 26.47 43.07 1.73
2082 2302 6.400568 ACCATAAAGTCGACTTTTCGGATAA 58.599 36.000 38.62 26.71 43.07 1.75
2083 2303 5.969423 ACCATAAAGTCGACTTTTCGGATA 58.031 37.500 38.62 27.24 43.07 2.59
2087 2307 5.840940 AAGACCATAAAGTCGACTTTTCG 57.159 39.130 39.66 30.32 43.07 3.46
2111 2332 4.728772 ACAAACATCTGGGATGAGAAACA 58.271 39.130 13.51 0.00 0.00 2.83
2122 2343 3.529533 TGCCACAAAAACAAACATCTGG 58.470 40.909 0.00 0.00 0.00 3.86
2203 2424 5.428253 ACTAAAACTGCAGTTCAGACTTCA 58.572 37.500 32.16 14.58 45.72 3.02
2204 2425 5.993106 ACTAAAACTGCAGTTCAGACTTC 57.007 39.130 32.16 0.00 45.72 3.01
2205 2426 8.451908 AATAACTAAAACTGCAGTTCAGACTT 57.548 30.769 32.16 24.71 45.72 3.01
2206 2427 9.726438 ATAATAACTAAAACTGCAGTTCAGACT 57.274 29.630 32.16 23.90 45.72 3.24
2250 2471 9.414295 CAGAAGCAAAAATTTCATATTCAGTCA 57.586 29.630 0.00 0.00 0.00 3.41
2251 2472 9.630098 TCAGAAGCAAAAATTTCATATTCAGTC 57.370 29.630 0.00 0.00 0.00 3.51
2265 2486 3.811083 TCGGTAAGGTCAGAAGCAAAAA 58.189 40.909 0.00 0.00 0.00 1.94
2277 2499 5.183904 AGTGTTAGTTACGAATCGGTAAGGT 59.816 40.000 7.80 0.00 33.33 3.50
2305 2527 2.663826 ACTGCAAAAACGCAAAAGGA 57.336 40.000 0.00 0.00 42.45 3.36
2306 2528 3.184178 CCATACTGCAAAAACGCAAAAGG 59.816 43.478 0.00 0.00 42.45 3.11
2312 2534 1.059942 GCACCATACTGCAAAAACGC 58.940 50.000 0.00 0.00 37.11 4.84
2451 2673 1.117994 CTGTATCTGAGAGGGCTGCA 58.882 55.000 0.50 0.00 0.00 4.41
2466 2688 4.576873 TCAATTGGAAACTTTGACGCTGTA 59.423 37.500 5.42 0.00 31.29 2.74
2469 2691 4.853924 ATCAATTGGAAACTTTGACGCT 57.146 36.364 5.42 0.00 36.48 5.07
2533 2755 1.017177 TCCAGCGGCGTTTCATACAC 61.017 55.000 9.37 0.00 0.00 2.90
2544 2766 2.159085 ACAGTAACTTCTATCCAGCGGC 60.159 50.000 0.00 0.00 0.00 6.53
2567 2789 9.260002 ACAAAAATGAACCTTGCTAATTTACTG 57.740 29.630 0.00 0.00 0.00 2.74
2573 2795 5.010617 ACGGACAAAAATGAACCTTGCTAAT 59.989 36.000 0.00 0.00 0.00 1.73
2857 3079 2.753452 TGGTGCTTACTCTTCTCCTACG 59.247 50.000 0.00 0.00 0.00 3.51
3012 3320 1.550976 ACAGTAGTCCTACTTGCAGCC 59.449 52.381 4.23 0.00 43.35 4.85
3157 3465 3.981375 GTGGAAGGTATATTCTCCCCCTT 59.019 47.826 0.00 0.00 38.20 3.95
3265 3573 4.842091 CTGGCGCGCTGGATTTGC 62.842 66.667 32.29 12.15 0.00 3.68
3435 3745 8.657729 TCAACAATGCTTGCAATACATATTTTG 58.342 29.630 13.68 14.95 0.00 2.44
3545 3855 3.619483 TGGTGAAGTTGTTGTAGTCGTTG 59.381 43.478 0.00 0.00 0.00 4.10
3590 3900 3.258622 CCGGTAGAGACAGGAACTTCTTT 59.741 47.826 0.00 0.00 43.13 2.52
3635 3945 0.454600 ATTGCTTTGCTCATGGCGAG 59.545 50.000 0.00 0.00 45.43 5.03
3740 4061 4.143030 GCGTATGGCAAACATATAGCTGAG 60.143 45.833 0.00 0.00 43.55 3.35
3766 4087 0.935196 CTTGACCTAAATACCGCGGC 59.065 55.000 28.58 5.76 0.00 6.53
3768 4089 1.137479 TCCCTTGACCTAAATACCGCG 59.863 52.381 0.00 0.00 0.00 6.46
3769 4090 2.558378 GTCCCTTGACCTAAATACCGC 58.442 52.381 0.00 0.00 35.34 5.68
3800 4121 0.108615 CAGACTTCAGTACAGCGGGG 60.109 60.000 0.00 0.00 0.00 5.73
3917 4244 6.574073 GAGGTGAACTCTGAATCTGAGTGATT 60.574 42.308 20.78 7.90 43.95 2.57
4076 4403 4.138290 CTGACTCCCATATCGAGTACTGT 58.862 47.826 0.00 0.00 40.67 3.55
4077 4404 4.023622 CACTGACTCCCATATCGAGTACTG 60.024 50.000 0.00 0.00 40.67 2.74
4078 4405 4.138290 CACTGACTCCCATATCGAGTACT 58.862 47.826 0.00 0.00 40.67 2.73
4079 4406 3.253677 CCACTGACTCCCATATCGAGTAC 59.746 52.174 2.60 0.00 40.67 2.73
4080 4407 3.117625 ACCACTGACTCCCATATCGAGTA 60.118 47.826 2.60 0.00 40.67 2.59
4081 4408 2.311463 CCACTGACTCCCATATCGAGT 58.689 52.381 2.26 2.26 43.28 4.18
4103 4430 4.324331 GGATTACCTCCCAAGCTTTACTGT 60.324 45.833 0.00 0.00 38.19 3.55
4160 4487 0.868406 CCAGTTCAACAACTCGAGGC 59.132 55.000 18.41 0.00 41.24 4.70
4161 4488 1.867233 CACCAGTTCAACAACTCGAGG 59.133 52.381 18.41 1.82 41.24 4.63
4164 4491 2.224079 CCATCACCAGTTCAACAACTCG 59.776 50.000 0.00 0.00 41.24 4.18
4167 4494 2.948979 TCACCATCACCAGTTCAACAAC 59.051 45.455 0.00 0.00 0.00 3.32
4170 4497 3.411446 TCATCACCATCACCAGTTCAAC 58.589 45.455 0.00 0.00 0.00 3.18
4172 4499 3.263937 TCATCATCACCATCACCAGTTCA 59.736 43.478 0.00 0.00 0.00 3.18
4180 4507 4.080186 ACCAGAACATCATCATCACCATCA 60.080 41.667 0.00 0.00 0.00 3.07
4188 4515 3.639672 TGCTCACCAGAACATCATCAT 57.360 42.857 0.00 0.00 0.00 2.45
4224 4551 2.353889 GAGCTGATGCCACTTGTACATG 59.646 50.000 7.18 7.18 40.80 3.21
4263 4599 1.349026 CTTCCTTCTTCAGGCCTCACA 59.651 52.381 0.00 0.00 43.55 3.58
4264 4600 1.339535 CCTTCCTTCTTCAGGCCTCAC 60.340 57.143 0.00 0.00 43.55 3.51
4265 4601 0.987294 CCTTCCTTCTTCAGGCCTCA 59.013 55.000 0.00 0.00 43.55 3.86
4266 4602 1.280457 TCCTTCCTTCTTCAGGCCTC 58.720 55.000 0.00 0.00 43.55 4.70
4267 4603 1.978361 ATCCTTCCTTCTTCAGGCCT 58.022 50.000 0.00 0.00 43.55 5.19
4269 4605 2.486370 GGCTATCCTTCCTTCTTCAGGC 60.486 54.545 0.00 0.00 43.55 4.85
4270 4606 2.774234 TGGCTATCCTTCCTTCTTCAGG 59.226 50.000 0.00 0.00 45.64 3.86
4303 4643 4.162690 GGGCTGCCTACAGGACCG 62.163 72.222 19.68 0.00 44.63 4.79
4312 4652 2.282462 CGTCCAAAAGGGCTGCCT 60.282 61.111 19.68 1.35 36.21 4.75
4314 4654 2.087462 AAAGCGTCCAAAAGGGCTGC 62.087 55.000 0.00 0.00 35.59 5.25
4342 4682 1.088306 CTGCTAGGAACGAGACGACT 58.912 55.000 0.00 0.00 30.78 4.18
4351 4691 2.512515 CTGGCCGCTGCTAGGAAC 60.513 66.667 5.55 0.00 42.00 3.62
4479 4822 3.304911 TTCCACTTGTCCCATGTTTGA 57.695 42.857 0.00 0.00 0.00 2.69
4606 4953 1.427819 GAAAAATGGCGACCGCGAT 59.572 52.632 8.23 7.20 41.20 4.58


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.