Multiple sequence alignment - TraesCS5D01G025700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G025700 chr5D 100.000 2711 0 0 1 2711 23059092 23056382 0.000000e+00 5007
1 TraesCS5D01G025700 chr5D 87.986 874 76 11 864 1710 23011445 23010574 0.000000e+00 1005
2 TraesCS5D01G025700 chr5D 88.836 627 52 3 1 609 23014703 23014077 0.000000e+00 754
3 TraesCS5D01G025700 chr5D 81.345 595 81 25 928 1503 504481453 504482036 8.850000e-125 457
4 TraesCS5D01G025700 chr5A 92.007 1126 51 7 1 1088 16839717 16838593 0.000000e+00 1544
5 TraesCS5D01G025700 chr5A 91.011 534 39 2 1207 1740 16734749 16734225 0.000000e+00 712
6 TraesCS5D01G025700 chr5A 85.458 612 49 4 1 593 16735601 16735011 3.860000e-168 601
7 TraesCS5D01G025700 chr5A 84.270 178 22 6 629 803 16735012 16734838 4.640000e-38 169
8 TraesCS5D01G025700 chr5B 87.446 1155 81 23 608 1710 16173359 16174501 0.000000e+00 1271
9 TraesCS5D01G025700 chr5B 90.385 936 57 8 858 1774 16369062 16368141 0.000000e+00 1199
10 TraesCS5D01G025700 chr5B 85.877 963 89 21 864 1798 16199433 16200376 0.000000e+00 981
11 TraesCS5D01G025700 chr5B 86.490 829 67 22 1 797 16198504 16199319 0.000000e+00 869
12 TraesCS5D01G025700 chr5B 87.927 762 53 18 1049 1793 16185666 16186405 0.000000e+00 861
13 TraesCS5D01G025700 chr5B 88.345 695 52 4 6 686 16386611 16385932 0.000000e+00 808
14 TraesCS5D01G025700 chr5B 89.726 438 32 9 1811 2240 16174680 16175112 5.100000e-152 547
15 TraesCS5D01G025700 chr5B 88.742 302 19 5 325 612 16172221 16172521 3.320000e-94 355
16 TraesCS5D01G025700 chr5B 86.644 292 38 1 1213 1503 633758030 633758321 3.370000e-84 322
17 TraesCS5D01G025700 chr5B 92.913 127 4 5 684 807 16370556 16370432 2.140000e-41 180
18 TraesCS5D01G025700 chrUn 91.718 809 42 4 921 1712 312425224 312426024 0.000000e+00 1099
19 TraesCS5D01G025700 chr3B 78.916 664 95 23 872 1503 18305808 18306458 2.510000e-110 409
20 TraesCS5D01G025700 chr3B 81.023 469 71 12 1038 1503 18484614 18485067 9.230000e-95 357


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G025700 chr5D 23056382 23059092 2710 True 5007.000000 5007 100.0000 1 2711 1 chr5D.!!$R1 2710
1 TraesCS5D01G025700 chr5D 23010574 23014703 4129 True 879.500000 1005 88.4110 1 1710 2 chr5D.!!$R2 1709
2 TraesCS5D01G025700 chr5D 504481453 504482036 583 False 457.000000 457 81.3450 928 1503 1 chr5D.!!$F1 575
3 TraesCS5D01G025700 chr5A 16838593 16839717 1124 True 1544.000000 1544 92.0070 1 1088 1 chr5A.!!$R1 1087
4 TraesCS5D01G025700 chr5A 16734225 16735601 1376 True 494.000000 712 86.9130 1 1740 3 chr5A.!!$R2 1739
5 TraesCS5D01G025700 chr5B 16198504 16200376 1872 False 925.000000 981 86.1835 1 1798 2 chr5B.!!$F4 1797
6 TraesCS5D01G025700 chr5B 16185666 16186405 739 False 861.000000 861 87.9270 1049 1793 1 chr5B.!!$F1 744
7 TraesCS5D01G025700 chr5B 16385932 16386611 679 True 808.000000 808 88.3450 6 686 1 chr5B.!!$R1 680
8 TraesCS5D01G025700 chr5B 16172221 16175112 2891 False 724.333333 1271 88.6380 325 2240 3 chr5B.!!$F3 1915
9 TraesCS5D01G025700 chr5B 16368141 16370556 2415 True 689.500000 1199 91.6490 684 1774 2 chr5B.!!$R2 1090
10 TraesCS5D01G025700 chrUn 312425224 312426024 800 False 1099.000000 1099 91.7180 921 1712 1 chrUn.!!$F1 791
11 TraesCS5D01G025700 chr3B 18305808 18306458 650 False 409.000000 409 78.9160 872 1503 1 chr3B.!!$F1 631

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
188 191 1.984288 AAACCCTATCCCCTGCTCGC 61.984 60.0 0.0 0.0 0.0 5.03 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2140 6103 0.034476 GCATCATCAGATCGCCTCCA 59.966 55.0 0.0 0.0 30.2 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
188 191 1.984288 AAACCCTATCCCCTGCTCGC 61.984 60.000 0.00 0.00 0.00 5.03
309 312 2.485814 GCTTAGAAGTTGGTCTGGCAAG 59.514 50.000 0.00 0.00 31.98 4.01
349 363 4.380841 CATGCTGTGGAAAATGCACTAT 57.619 40.909 3.71 0.00 39.59 2.12
483 497 5.999205 AATTCATGCCCATCTGTTTGTAA 57.001 34.783 0.00 0.00 0.00 2.41
535 563 6.414732 TCACCGGATGATTTTATTCAGAAGT 58.585 36.000 9.46 0.00 29.99 3.01
641 3091 9.891828 CAAACTATTTTGCAAGTCACATAACTA 57.108 29.630 0.00 0.00 35.94 2.24
701 3151 9.979578 TTACTTGCATAGTCATTGTTTTTCAAT 57.020 25.926 5.04 0.00 41.33 2.57
703 3153 8.981647 ACTTGCATAGTCATTGTTTTTCAATTC 58.018 29.630 0.00 0.00 43.93 2.17
735 3187 6.252281 TGAAACACACACTTCGAATAAACAC 58.748 36.000 0.00 0.00 0.00 3.32
773 3226 6.420604 ACAAGCTTTTGGACGTGAATATTTTG 59.579 34.615 0.00 0.00 0.00 2.44
774 3227 6.084326 AGCTTTTGGACGTGAATATTTTGT 57.916 33.333 0.00 0.00 0.00 2.83
782 3235 5.408604 GGACGTGAATATTTTGTGTCAGACT 59.591 40.000 0.00 0.00 0.00 3.24
813 3280 5.623824 GCCGGTTGTAAGAGTATGAAAGAGA 60.624 44.000 1.90 0.00 0.00 3.10
831 3298 5.652994 AGAGAGGAATAGAGTTGTGTGAC 57.347 43.478 0.00 0.00 0.00 3.67
833 3300 5.184864 AGAGAGGAATAGAGTTGTGTGACTG 59.815 44.000 0.00 0.00 0.00 3.51
873 4666 8.740906 TCTGTAGTGGAATAGAGTTGTAGAAAG 58.259 37.037 0.00 0.00 0.00 2.62
1141 4980 4.947388 TGTTCTAGTTTTTCTGCAGGTGTT 59.053 37.500 15.13 0.00 0.00 3.32
1326 5165 3.740397 CGTCGGAGTGGTACGCCA 61.740 66.667 2.79 0.00 38.00 5.69
1367 5206 3.390521 ATCCGCCTCGCCAACTCA 61.391 61.111 0.00 0.00 0.00 3.41
1529 5368 2.494870 GGACGAGGCCTAACTCAAACTA 59.505 50.000 4.42 0.00 37.34 2.24
1575 5414 2.947243 GCATCCATGGTGTCAGTCCATT 60.947 50.000 12.58 0.00 42.92 3.16
1628 5487 3.818295 TTTGTAACTGGGGTATGCCTT 57.182 42.857 0.00 0.00 34.45 4.35
1631 5490 2.171870 TGTAACTGGGGTATGCCTTAGC 59.828 50.000 0.00 0.00 40.48 3.09
1690 5549 2.613133 GTCTTCGGAGCAGAGTACGTAT 59.387 50.000 0.00 0.00 0.00 3.06
1730 5685 7.311364 TGTAAATAAAGTATTCCCTTCGTGC 57.689 36.000 0.00 0.00 0.00 5.34
1736 5691 2.265467 TATTCCCTTCGTGCAGCCCC 62.265 60.000 0.00 0.00 0.00 5.80
1742 5697 2.572095 CTTCGTGCAGCCCCGTATCA 62.572 60.000 0.00 0.00 0.00 2.15
1744 5699 2.246739 CGTGCAGCCCCGTATCATG 61.247 63.158 0.00 0.00 0.00 3.07
1748 5707 0.663153 GCAGCCCCGTATCATGTTTC 59.337 55.000 0.00 0.00 0.00 2.78
1760 5719 7.250569 CCGTATCATGTTTCTTTTAGCATGTT 58.749 34.615 0.00 0.00 39.54 2.71
1761 5720 8.394877 CCGTATCATGTTTCTTTTAGCATGTTA 58.605 33.333 0.00 0.00 39.54 2.41
1762 5721 9.935682 CGTATCATGTTTCTTTTAGCATGTTAT 57.064 29.630 0.00 0.00 39.54 1.89
1775 5734 5.324832 AGCATGTTATAGGGTTATTGCCT 57.675 39.130 0.00 0.00 0.00 4.75
1798 5757 3.616219 AGGCGTGGTGAATTGCTTTATA 58.384 40.909 0.00 0.00 0.00 0.98
1799 5758 3.377172 AGGCGTGGTGAATTGCTTTATAC 59.623 43.478 0.00 0.00 0.00 1.47
1800 5759 3.377172 GGCGTGGTGAATTGCTTTATACT 59.623 43.478 0.00 0.00 0.00 2.12
1801 5760 4.573201 GGCGTGGTGAATTGCTTTATACTA 59.427 41.667 0.00 0.00 0.00 1.82
1802 5761 5.238650 GGCGTGGTGAATTGCTTTATACTAT 59.761 40.000 0.00 0.00 0.00 2.12
1803 5762 6.425721 GGCGTGGTGAATTGCTTTATACTATA 59.574 38.462 0.00 0.00 0.00 1.31
1804 5763 7.041644 GGCGTGGTGAATTGCTTTATACTATAA 60.042 37.037 0.00 0.00 0.00 0.98
1826 5785 5.376854 AAGTGGGAAGAAATCATGTTTCG 57.623 39.130 12.20 0.00 33.86 3.46
1832 5791 4.938226 GGAAGAAATCATGTTTCGAGGAGT 59.062 41.667 12.20 0.00 33.86 3.85
1835 5794 5.551233 AGAAATCATGTTTCGAGGAGTTGA 58.449 37.500 12.20 0.00 33.86 3.18
1836 5795 5.409826 AGAAATCATGTTTCGAGGAGTTGAC 59.590 40.000 12.20 0.00 33.86 3.18
1837 5796 3.744238 TCATGTTTCGAGGAGTTGACA 57.256 42.857 0.00 0.00 0.00 3.58
1839 5798 4.641396 TCATGTTTCGAGGAGTTGACAAT 58.359 39.130 0.00 0.00 0.00 2.71
1840 5799 4.452114 TCATGTTTCGAGGAGTTGACAATG 59.548 41.667 0.00 0.00 0.00 2.82
1841 5800 3.138304 TGTTTCGAGGAGTTGACAATGG 58.862 45.455 0.00 0.00 0.00 3.16
1847 5806 1.073923 AGGAGTTGACAATGGGGTGAC 59.926 52.381 0.00 0.00 0.00 3.67
1863 5822 2.906897 ACCGTGCTGCCCTGTTTG 60.907 61.111 0.00 0.00 0.00 2.93
1864 5823 4.347453 CCGTGCTGCCCTGTTTGC 62.347 66.667 0.00 0.00 0.00 3.68
1873 5834 2.317609 CCCTGTTTGCCGAGTGTCG 61.318 63.158 0.00 0.00 40.07 4.35
1886 5847 1.371635 GTGTCGGCAAACATGCACC 60.372 57.895 0.00 0.00 36.33 5.01
1906 5867 1.917782 GCAAAGCGATTGTGCCGGTA 61.918 55.000 1.90 0.00 41.32 4.02
1910 5871 0.533491 AGCGATTGTGCCGGTAGTAA 59.467 50.000 1.90 0.00 35.89 2.24
1911 5872 1.066716 AGCGATTGTGCCGGTAGTAAA 60.067 47.619 1.90 0.00 35.89 2.01
2006 5968 6.269315 ACATTTCACGCAAAGAAAATGTGTA 58.731 32.000 10.53 0.00 42.32 2.90
2014 5976 6.588373 ACGCAAAGAAAATGTGTAAACAAAGT 59.412 30.769 0.00 0.00 39.58 2.66
2017 5979 8.603181 GCAAAGAAAATGTGTAAACAAAGTGAT 58.397 29.630 0.00 0.00 0.00 3.06
2027 5989 4.911514 AAACAAAGTGATAAAGCGTGGT 57.088 36.364 0.00 0.00 0.00 4.16
2034 5996 7.040686 ACAAAGTGATAAAGCGTGGTAGAAATT 60.041 33.333 0.00 0.00 0.00 1.82
2035 5997 6.663944 AGTGATAAAGCGTGGTAGAAATTC 57.336 37.500 0.00 0.00 0.00 2.17
2048 6010 7.360353 CGTGGTAGAAATTCAATCGATGCATAT 60.360 37.037 0.00 0.00 0.00 1.78
2079 6042 3.181516 GGTGTTCTTGAAGTGATGCGATC 60.182 47.826 0.00 0.00 0.00 3.69
2106 6069 2.165030 CCCAACATTCTCCAACTCATGC 59.835 50.000 0.00 0.00 0.00 4.06
2107 6070 2.821378 CCAACATTCTCCAACTCATGCA 59.179 45.455 0.00 0.00 0.00 3.96
2108 6071 3.366679 CCAACATTCTCCAACTCATGCAC 60.367 47.826 0.00 0.00 0.00 4.57
2129 6092 1.565156 TTGCCATCACGAACACGAGC 61.565 55.000 0.00 0.00 0.00 5.03
2132 6095 0.388520 CCATCACGAACACGAGCTCA 60.389 55.000 15.40 0.00 0.00 4.26
2133 6096 0.710567 CATCACGAACACGAGCTCAC 59.289 55.000 15.40 0.00 0.00 3.51
2140 6103 4.363990 CACGAGCTCACGGCCACT 62.364 66.667 15.40 0.00 43.05 4.00
2141 6104 4.363990 ACGAGCTCACGGCCACTG 62.364 66.667 15.40 0.00 43.05 3.66
2198 6161 3.024547 AGGCGTCATAGCAAGAGACTAA 58.975 45.455 0.00 0.00 39.27 2.24
2240 6203 4.834406 TCACCCTCCTCTAATAGACCAT 57.166 45.455 0.00 0.00 0.00 3.55
2241 6204 5.942977 TCACCCTCCTCTAATAGACCATA 57.057 43.478 0.00 0.00 0.00 2.74
2242 6205 5.642165 TCACCCTCCTCTAATAGACCATAC 58.358 45.833 0.00 0.00 0.00 2.39
2243 6206 4.773149 CACCCTCCTCTAATAGACCATACC 59.227 50.000 0.00 0.00 0.00 2.73
2244 6207 4.017808 CCCTCCTCTAATAGACCATACCG 58.982 52.174 0.00 0.00 0.00 4.02
2245 6208 4.263816 CCCTCCTCTAATAGACCATACCGA 60.264 50.000 0.00 0.00 0.00 4.69
2246 6209 5.511363 CCTCCTCTAATAGACCATACCGAT 58.489 45.833 0.00 0.00 0.00 4.18
2247 6210 5.591067 CCTCCTCTAATAGACCATACCGATC 59.409 48.000 0.00 0.00 0.00 3.69
2248 6211 5.507637 TCCTCTAATAGACCATACCGATCC 58.492 45.833 0.00 0.00 0.00 3.36
2249 6212 5.253330 TCCTCTAATAGACCATACCGATCCT 59.747 44.000 0.00 0.00 0.00 3.24
2250 6213 5.952947 CCTCTAATAGACCATACCGATCCTT 59.047 44.000 0.00 0.00 0.00 3.36
2251 6214 6.437793 CCTCTAATAGACCATACCGATCCTTT 59.562 42.308 0.00 0.00 0.00 3.11
2252 6215 7.363094 CCTCTAATAGACCATACCGATCCTTTC 60.363 44.444 0.00 0.00 0.00 2.62
2253 6216 7.008332 TCTAATAGACCATACCGATCCTTTCA 58.992 38.462 0.00 0.00 0.00 2.69
2254 6217 3.821421 AGACCATACCGATCCTTTCAC 57.179 47.619 0.00 0.00 0.00 3.18
2255 6218 2.434702 AGACCATACCGATCCTTTCACC 59.565 50.000 0.00 0.00 0.00 4.02
2256 6219 2.169769 GACCATACCGATCCTTTCACCA 59.830 50.000 0.00 0.00 0.00 4.17
2257 6220 2.574369 ACCATACCGATCCTTTCACCAA 59.426 45.455 0.00 0.00 0.00 3.67
2258 6221 3.206150 CCATACCGATCCTTTCACCAAG 58.794 50.000 0.00 0.00 0.00 3.61
2259 6222 3.370527 CCATACCGATCCTTTCACCAAGT 60.371 47.826 0.00 0.00 0.00 3.16
2260 6223 2.951229 ACCGATCCTTTCACCAAGTT 57.049 45.000 0.00 0.00 0.00 2.66
2261 6224 2.504367 ACCGATCCTTTCACCAAGTTG 58.496 47.619 0.00 0.00 0.00 3.16
2262 6225 2.105821 ACCGATCCTTTCACCAAGTTGA 59.894 45.455 3.87 0.00 0.00 3.18
2263 6226 2.484264 CCGATCCTTTCACCAAGTTGAC 59.516 50.000 3.87 0.00 0.00 3.18
2264 6227 2.157668 CGATCCTTTCACCAAGTTGACG 59.842 50.000 3.87 0.00 0.00 4.35
2265 6228 1.961793 TCCTTTCACCAAGTTGACGG 58.038 50.000 3.87 0.00 0.00 4.79
2266 6229 0.310854 CCTTTCACCAAGTTGACGGC 59.689 55.000 3.87 0.00 0.00 5.68
2267 6230 1.021202 CTTTCACCAAGTTGACGGCA 58.979 50.000 3.87 0.00 0.00 5.69
2268 6231 1.002468 CTTTCACCAAGTTGACGGCAG 60.002 52.381 3.87 0.00 0.00 4.85
2269 6232 0.179234 TTCACCAAGTTGACGGCAGA 59.821 50.000 3.87 0.00 0.00 4.26
2270 6233 0.396435 TCACCAAGTTGACGGCAGAT 59.604 50.000 3.87 0.00 0.00 2.90
2271 6234 0.798776 CACCAAGTTGACGGCAGATC 59.201 55.000 3.87 0.00 0.00 2.75
2272 6235 0.396435 ACCAAGTTGACGGCAGATCA 59.604 50.000 3.87 0.00 0.00 2.92
2273 6236 1.202758 ACCAAGTTGACGGCAGATCAA 60.203 47.619 3.87 0.00 33.68 2.57
2274 6237 1.466167 CCAAGTTGACGGCAGATCAAG 59.534 52.381 3.87 0.00 36.76 3.02
2275 6238 2.146342 CAAGTTGACGGCAGATCAAGT 58.854 47.619 0.00 0.00 40.66 3.16
2276 6239 2.086054 AGTTGACGGCAGATCAAGTC 57.914 50.000 0.00 0.00 35.26 3.01
2277 6240 1.079503 GTTGACGGCAGATCAAGTCC 58.920 55.000 0.00 0.00 36.76 3.85
2278 6241 0.036388 TTGACGGCAGATCAAGTCCC 60.036 55.000 0.00 0.00 32.34 4.46
2279 6242 1.153349 GACGGCAGATCAAGTCCCC 60.153 63.158 0.00 0.00 0.00 4.81
2280 6243 1.899437 GACGGCAGATCAAGTCCCCA 61.899 60.000 0.00 0.00 0.00 4.96
2281 6244 1.153289 CGGCAGATCAAGTCCCCAG 60.153 63.158 0.00 0.00 0.00 4.45
2282 6245 1.225704 GGCAGATCAAGTCCCCAGG 59.774 63.158 0.00 0.00 0.00 4.45
2283 6246 1.452833 GCAGATCAAGTCCCCAGGC 60.453 63.158 0.00 0.00 0.00 4.85
2284 6247 1.993653 CAGATCAAGTCCCCAGGCA 59.006 57.895 0.00 0.00 0.00 4.75
2285 6248 0.393537 CAGATCAAGTCCCCAGGCAC 60.394 60.000 0.00 0.00 0.00 5.01
2286 6249 1.077429 GATCAAGTCCCCAGGCACC 60.077 63.158 0.00 0.00 0.00 5.01
2287 6250 2.876368 GATCAAGTCCCCAGGCACCG 62.876 65.000 0.00 0.00 0.00 4.94
2288 6251 4.722700 CAAGTCCCCAGGCACCGG 62.723 72.222 0.00 0.00 0.00 5.28
2295 6258 4.802051 CCAGGCACCGGGGACATG 62.802 72.222 15.02 9.31 0.00 3.21
2296 6259 3.716195 CAGGCACCGGGGACATGA 61.716 66.667 15.02 0.00 0.00 3.07
2297 6260 3.402681 AGGCACCGGGGACATGAG 61.403 66.667 15.02 0.00 0.00 2.90
2299 6262 4.408821 GCACCGGGGACATGAGCA 62.409 66.667 8.67 0.00 0.00 4.26
2300 6263 2.350895 CACCGGGGACATGAGCAA 59.649 61.111 6.32 0.00 0.00 3.91
2301 6264 2.040544 CACCGGGGACATGAGCAAC 61.041 63.158 6.32 0.00 0.00 4.17
2302 6265 2.438434 CCGGGGACATGAGCAACC 60.438 66.667 0.00 0.00 0.00 3.77
2303 6266 2.671070 CGGGGACATGAGCAACCT 59.329 61.111 0.00 0.00 0.00 3.50
2304 6267 1.002134 CGGGGACATGAGCAACCTT 60.002 57.895 0.00 0.00 0.00 3.50
2305 6268 1.308069 CGGGGACATGAGCAACCTTG 61.308 60.000 0.00 0.00 0.00 3.61
2306 6269 0.251341 GGGGACATGAGCAACCTTGT 60.251 55.000 0.00 0.00 0.00 3.16
2307 6270 1.004277 GGGGACATGAGCAACCTTGTA 59.996 52.381 0.00 0.00 0.00 2.41
2308 6271 2.359900 GGGACATGAGCAACCTTGTAG 58.640 52.381 0.00 0.00 0.00 2.74
2309 6272 1.740025 GGACATGAGCAACCTTGTAGC 59.260 52.381 0.00 0.00 0.00 3.58
2310 6273 2.426522 GACATGAGCAACCTTGTAGCA 58.573 47.619 0.00 0.00 0.00 3.49
2311 6274 3.012518 GACATGAGCAACCTTGTAGCAT 58.987 45.455 0.00 0.00 0.00 3.79
2312 6275 3.012518 ACATGAGCAACCTTGTAGCATC 58.987 45.455 0.00 0.00 0.00 3.91
2313 6276 2.113860 TGAGCAACCTTGTAGCATCC 57.886 50.000 0.00 0.00 0.00 3.51
2314 6277 1.630369 TGAGCAACCTTGTAGCATCCT 59.370 47.619 0.00 0.00 0.00 3.24
2315 6278 2.837591 TGAGCAACCTTGTAGCATCCTA 59.162 45.455 0.00 0.00 0.00 2.94
2316 6279 3.455910 TGAGCAACCTTGTAGCATCCTAT 59.544 43.478 0.00 0.00 0.00 2.57
2317 6280 3.812053 GAGCAACCTTGTAGCATCCTATG 59.188 47.826 0.00 0.00 0.00 2.23
2318 6281 2.880890 GCAACCTTGTAGCATCCTATGG 59.119 50.000 0.00 0.00 0.00 2.74
2319 6282 2.880890 CAACCTTGTAGCATCCTATGGC 59.119 50.000 0.00 0.00 0.00 4.40
2320 6283 1.070758 ACCTTGTAGCATCCTATGGCG 59.929 52.381 0.00 0.00 34.54 5.69
2321 6284 1.344438 CCTTGTAGCATCCTATGGCGA 59.656 52.381 0.00 0.00 34.54 5.54
2322 6285 2.408050 CTTGTAGCATCCTATGGCGAC 58.592 52.381 0.00 0.00 36.38 5.19
2323 6286 1.704641 TGTAGCATCCTATGGCGACT 58.295 50.000 0.00 0.00 36.72 4.18
2324 6287 1.613925 TGTAGCATCCTATGGCGACTC 59.386 52.381 0.00 0.00 36.72 3.36
2325 6288 1.889829 GTAGCATCCTATGGCGACTCT 59.110 52.381 0.00 0.00 33.60 3.24
2326 6289 0.678395 AGCATCCTATGGCGACTCTG 59.322 55.000 0.00 0.00 34.54 3.35
2327 6290 0.676184 GCATCCTATGGCGACTCTGA 59.324 55.000 0.00 0.00 0.00 3.27
2328 6291 1.604185 GCATCCTATGGCGACTCTGAC 60.604 57.143 0.00 0.00 0.00 3.51
2329 6292 1.683385 CATCCTATGGCGACTCTGACA 59.317 52.381 0.00 0.00 0.00 3.58
2330 6293 2.073252 TCCTATGGCGACTCTGACAT 57.927 50.000 0.00 0.00 0.00 3.06
2331 6294 1.683385 TCCTATGGCGACTCTGACATG 59.317 52.381 0.00 0.00 0.00 3.21
2332 6295 1.269988 CCTATGGCGACTCTGACATGG 60.270 57.143 0.00 0.00 0.00 3.66
2333 6296 1.410517 CTATGGCGACTCTGACATGGT 59.589 52.381 0.00 0.00 0.00 3.55
2334 6297 1.485124 ATGGCGACTCTGACATGGTA 58.515 50.000 0.00 0.00 0.00 3.25
2335 6298 1.262417 TGGCGACTCTGACATGGTAA 58.738 50.000 0.00 0.00 0.00 2.85
2336 6299 1.831106 TGGCGACTCTGACATGGTAAT 59.169 47.619 0.00 0.00 0.00 1.89
2337 6300 2.205074 GGCGACTCTGACATGGTAATG 58.795 52.381 0.00 0.00 39.89 1.90
2338 6301 2.159099 GGCGACTCTGACATGGTAATGA 60.159 50.000 0.00 0.00 37.24 2.57
2339 6302 3.521560 GCGACTCTGACATGGTAATGAA 58.478 45.455 0.00 0.00 37.24 2.57
2340 6303 3.932710 GCGACTCTGACATGGTAATGAAA 59.067 43.478 0.00 0.00 37.24 2.69
2341 6304 4.391830 GCGACTCTGACATGGTAATGAAAA 59.608 41.667 0.00 0.00 37.24 2.29
2342 6305 5.671329 GCGACTCTGACATGGTAATGAAAAC 60.671 44.000 0.00 0.00 37.24 2.43
2343 6306 5.408299 CGACTCTGACATGGTAATGAAAACA 59.592 40.000 0.00 0.00 37.24 2.83
2344 6307 6.073276 CGACTCTGACATGGTAATGAAAACAA 60.073 38.462 0.00 0.00 37.24 2.83
2345 6308 6.970484 ACTCTGACATGGTAATGAAAACAAC 58.030 36.000 0.00 0.00 37.24 3.32
2346 6309 6.772716 ACTCTGACATGGTAATGAAAACAACT 59.227 34.615 0.00 0.00 37.24 3.16
2347 6310 6.969366 TCTGACATGGTAATGAAAACAACTG 58.031 36.000 0.00 0.00 37.24 3.16
2348 6311 6.770303 TCTGACATGGTAATGAAAACAACTGA 59.230 34.615 0.00 0.00 37.24 3.41
2349 6312 7.448161 TCTGACATGGTAATGAAAACAACTGAT 59.552 33.333 0.00 0.00 37.24 2.90
2350 6313 7.950512 TGACATGGTAATGAAAACAACTGATT 58.049 30.769 0.00 0.00 37.24 2.57
2351 6314 8.081633 TGACATGGTAATGAAAACAACTGATTC 58.918 33.333 0.00 0.00 37.24 2.52
2352 6315 7.950512 ACATGGTAATGAAAACAACTGATTCA 58.049 30.769 0.00 5.58 37.24 2.57
2353 6316 8.084073 ACATGGTAATGAAAACAACTGATTCAG 58.916 33.333 12.17 12.17 36.59 3.02
2354 6317 8.084073 CATGGTAATGAAAACAACTGATTCAGT 58.916 33.333 13.61 13.61 40.30 3.41
2355 6318 7.424803 TGGTAATGAAAACAACTGATTCAGTG 58.575 34.615 19.65 15.14 44.62 3.66
2356 6319 6.363357 GGTAATGAAAACAACTGATTCAGTGC 59.637 38.462 19.65 6.59 44.62 4.40
2357 6320 5.779529 ATGAAAACAACTGATTCAGTGCT 57.220 34.783 19.65 2.60 44.62 4.40
2358 6321 4.923893 TGAAAACAACTGATTCAGTGCTG 58.076 39.130 19.65 16.59 44.62 4.41
2359 6322 3.996150 AAACAACTGATTCAGTGCTGG 57.004 42.857 19.65 11.97 44.62 4.85
2360 6323 1.901591 ACAACTGATTCAGTGCTGGG 58.098 50.000 19.65 9.80 44.62 4.45
2361 6324 1.171308 CAACTGATTCAGTGCTGGGG 58.829 55.000 19.65 2.96 44.62 4.96
2362 6325 1.067295 AACTGATTCAGTGCTGGGGA 58.933 50.000 19.65 0.00 44.62 4.81
2363 6326 1.067295 ACTGATTCAGTGCTGGGGAA 58.933 50.000 18.35 0.00 43.63 3.97
2364 6327 1.425066 ACTGATTCAGTGCTGGGGAAA 59.575 47.619 18.35 0.00 43.63 3.13
2365 6328 1.815003 CTGATTCAGTGCTGGGGAAAC 59.185 52.381 5.46 0.00 0.00 2.78
2366 6329 1.144708 TGATTCAGTGCTGGGGAAACA 59.855 47.619 0.00 0.00 0.00 2.83
2367 6330 2.225091 TGATTCAGTGCTGGGGAAACAT 60.225 45.455 0.00 0.00 0.00 2.71
2368 6331 2.380064 TTCAGTGCTGGGGAAACATT 57.620 45.000 0.00 0.00 0.00 2.71
2369 6332 1.909700 TCAGTGCTGGGGAAACATTC 58.090 50.000 0.00 0.00 0.00 2.67
2370 6333 1.425066 TCAGTGCTGGGGAAACATTCT 59.575 47.619 0.00 0.00 0.00 2.40
2371 6334 1.542915 CAGTGCTGGGGAAACATTCTG 59.457 52.381 0.00 0.00 0.00 3.02
2372 6335 1.145738 AGTGCTGGGGAAACATTCTGT 59.854 47.619 0.00 0.00 0.00 3.41
2373 6336 1.270550 GTGCTGGGGAAACATTCTGTG 59.729 52.381 0.00 0.00 0.00 3.66
2374 6337 1.144708 TGCTGGGGAAACATTCTGTGA 59.855 47.619 0.00 0.00 0.00 3.58
2375 6338 2.225091 TGCTGGGGAAACATTCTGTGAT 60.225 45.455 0.00 0.00 0.00 3.06
2376 6339 3.010027 TGCTGGGGAAACATTCTGTGATA 59.990 43.478 0.00 0.00 0.00 2.15
2377 6340 3.629398 GCTGGGGAAACATTCTGTGATAG 59.371 47.826 0.00 0.00 0.00 2.08
2378 6341 4.626287 GCTGGGGAAACATTCTGTGATAGA 60.626 45.833 0.00 0.00 0.00 1.98
2379 6342 5.102953 TGGGGAAACATTCTGTGATAGAG 57.897 43.478 0.00 0.00 36.61 2.43
2380 6343 4.782691 TGGGGAAACATTCTGTGATAGAGA 59.217 41.667 0.00 0.00 36.61 3.10
2381 6344 5.250543 TGGGGAAACATTCTGTGATAGAGAA 59.749 40.000 0.00 0.00 36.61 2.87
2382 6345 5.819901 GGGGAAACATTCTGTGATAGAGAAG 59.180 44.000 0.00 0.00 36.61 2.85
2383 6346 5.819901 GGGAAACATTCTGTGATAGAGAAGG 59.180 44.000 0.00 0.00 37.28 3.46
2384 6347 5.295540 GGAAACATTCTGTGATAGAGAAGGC 59.704 44.000 0.00 0.00 35.17 4.35
2385 6348 5.690464 AACATTCTGTGATAGAGAAGGCT 57.310 39.130 0.00 0.00 35.17 4.58
2386 6349 5.021033 ACATTCTGTGATAGAGAAGGCTG 57.979 43.478 0.00 0.00 35.17 4.85
2387 6350 4.713814 ACATTCTGTGATAGAGAAGGCTGA 59.286 41.667 0.00 0.00 35.17 4.26
2388 6351 4.727507 TTCTGTGATAGAGAAGGCTGAC 57.272 45.455 0.00 0.00 36.61 3.51
2389 6352 2.685388 TCTGTGATAGAGAAGGCTGACG 59.315 50.000 0.00 0.00 0.00 4.35
2390 6353 2.425312 CTGTGATAGAGAAGGCTGACGT 59.575 50.000 0.00 0.00 0.00 4.34
2391 6354 2.164422 TGTGATAGAGAAGGCTGACGTG 59.836 50.000 0.00 0.00 0.00 4.49
2392 6355 1.751351 TGATAGAGAAGGCTGACGTGG 59.249 52.381 0.00 0.00 0.00 4.94
2393 6356 2.025155 GATAGAGAAGGCTGACGTGGA 58.975 52.381 0.00 0.00 0.00 4.02
2394 6357 1.464734 TAGAGAAGGCTGACGTGGAG 58.535 55.000 0.00 0.00 0.00 3.86
2395 6358 1.216710 GAGAAGGCTGACGTGGAGG 59.783 63.158 0.00 0.00 0.00 4.30
2396 6359 1.534235 AGAAGGCTGACGTGGAGGT 60.534 57.895 0.00 0.00 0.00 3.85
2397 6360 1.374758 GAAGGCTGACGTGGAGGTG 60.375 63.158 0.00 0.00 0.00 4.00
2398 6361 1.816863 GAAGGCTGACGTGGAGGTGA 61.817 60.000 0.00 0.00 0.00 4.02
2399 6362 1.194781 AAGGCTGACGTGGAGGTGAT 61.195 55.000 0.00 0.00 0.00 3.06
2400 6363 1.153549 GGCTGACGTGGAGGTGATC 60.154 63.158 0.00 0.00 0.00 2.92
2419 6382 3.985410 CTGGAAGGATCTTTGGCCA 57.015 52.632 0.00 0.00 0.00 5.36
2420 6383 2.449137 CTGGAAGGATCTTTGGCCAT 57.551 50.000 6.09 0.00 0.00 4.40
2421 6384 2.029623 CTGGAAGGATCTTTGGCCATG 58.970 52.381 6.09 2.48 0.00 3.66
2422 6385 1.342275 TGGAAGGATCTTTGGCCATGG 60.342 52.381 6.09 7.63 0.00 3.66
2423 6386 1.342374 GGAAGGATCTTTGGCCATGGT 60.342 52.381 14.67 0.00 0.00 3.55
2424 6387 2.091885 GGAAGGATCTTTGGCCATGGTA 60.092 50.000 14.67 0.00 0.00 3.25
2425 6388 2.736670 AGGATCTTTGGCCATGGTAC 57.263 50.000 14.67 7.64 0.00 3.34
2426 6389 1.215423 AGGATCTTTGGCCATGGTACC 59.785 52.381 14.67 4.43 0.00 3.34
2427 6390 1.064017 GGATCTTTGGCCATGGTACCA 60.064 52.381 18.99 18.99 0.00 3.25
2428 6391 2.424812 GGATCTTTGGCCATGGTACCAT 60.425 50.000 22.23 22.23 35.42 3.55
2436 6399 2.797837 CATGGTACCATGCACCCAG 58.202 57.895 35.69 15.59 45.71 4.45
2437 6400 1.076777 ATGGTACCATGCACCCAGC 60.077 57.895 26.82 0.00 45.96 4.85
2446 6409 3.994853 GCACCCAGCAACCAAGCC 61.995 66.667 0.00 0.00 44.79 4.35
2447 6410 3.673484 CACCCAGCAACCAAGCCG 61.673 66.667 0.00 0.00 34.23 5.52
2448 6411 4.974721 ACCCAGCAACCAAGCCGG 62.975 66.667 0.00 0.00 42.50 6.13
2449 6412 4.659172 CCCAGCAACCAAGCCGGA 62.659 66.667 5.05 0.00 33.84 5.14
2450 6413 2.361610 CCAGCAACCAAGCCGGAT 60.362 61.111 5.05 0.00 33.84 4.18
2451 6414 1.077787 CCAGCAACCAAGCCGGATA 60.078 57.895 5.05 0.00 33.84 2.59
2452 6415 0.679640 CCAGCAACCAAGCCGGATAA 60.680 55.000 5.05 0.00 33.84 1.75
2453 6416 1.173043 CAGCAACCAAGCCGGATAAA 58.827 50.000 5.05 0.00 38.63 1.40
2454 6417 1.543802 CAGCAACCAAGCCGGATAAAA 59.456 47.619 5.05 0.00 38.63 1.52
2455 6418 2.029470 CAGCAACCAAGCCGGATAAAAA 60.029 45.455 5.05 0.00 38.63 1.94
2470 6433 3.448469 AAAAACGGGGCAAGATGGA 57.552 47.368 0.00 0.00 0.00 3.41
2471 6434 1.256812 AAAAACGGGGCAAGATGGAG 58.743 50.000 0.00 0.00 0.00 3.86
2472 6435 0.611896 AAAACGGGGCAAGATGGAGG 60.612 55.000 0.00 0.00 0.00 4.30
2473 6436 1.789576 AAACGGGGCAAGATGGAGGT 61.790 55.000 0.00 0.00 0.00 3.85
2474 6437 2.124570 CGGGGCAAGATGGAGGTG 60.125 66.667 0.00 0.00 0.00 4.00
2475 6438 2.669133 CGGGGCAAGATGGAGGTGA 61.669 63.158 0.00 0.00 0.00 4.02
2476 6439 1.077429 GGGGCAAGATGGAGGTGAC 60.077 63.158 0.00 0.00 0.00 3.67
2477 6440 1.685224 GGGCAAGATGGAGGTGACA 59.315 57.895 0.00 0.00 0.00 3.58
2478 6441 0.678048 GGGCAAGATGGAGGTGACAC 60.678 60.000 0.00 0.00 0.00 3.67
2479 6442 0.036732 GGCAAGATGGAGGTGACACA 59.963 55.000 8.08 0.00 0.00 3.72
2480 6443 1.160137 GCAAGATGGAGGTGACACAC 58.840 55.000 8.08 0.73 0.00 3.82
2481 6444 1.271054 GCAAGATGGAGGTGACACACT 60.271 52.381 8.08 2.03 34.40 3.55
2482 6445 2.693069 CAAGATGGAGGTGACACACTC 58.307 52.381 8.08 11.06 34.40 3.51
2483 6446 1.270907 AGATGGAGGTGACACACTCC 58.729 55.000 24.98 24.98 34.58 3.85
2484 6447 0.976641 GATGGAGGTGACACACTCCA 59.023 55.000 31.18 31.18 41.75 3.86
2485 6448 1.347707 GATGGAGGTGACACACTCCAA 59.652 52.381 32.00 22.11 41.30 3.53
2486 6449 0.758734 TGGAGGTGACACACTCCAAG 59.241 55.000 29.00 0.00 38.08 3.61
2487 6450 0.035458 GGAGGTGACACACTCCAAGG 59.965 60.000 26.00 0.00 34.34 3.61
2488 6451 1.048601 GAGGTGACACACTCCAAGGA 58.951 55.000 8.08 0.00 34.40 3.36
2489 6452 1.001406 GAGGTGACACACTCCAAGGAG 59.999 57.143 14.44 14.44 46.91 3.69
2490 6453 0.035458 GGTGACACACTCCAAGGAGG 59.965 60.000 19.62 11.13 45.88 4.30
2491 6454 1.048601 GTGACACACTCCAAGGAGGA 58.951 55.000 19.62 0.00 45.88 3.71
2502 6465 4.934797 TCCAAGGAGGATCAGAAAACAT 57.065 40.909 0.00 0.00 43.07 2.71
2504 6467 5.994250 TCCAAGGAGGATCAGAAAACATAG 58.006 41.667 0.00 0.00 43.07 2.23
2505 6468 5.104360 TCCAAGGAGGATCAGAAAACATAGG 60.104 44.000 0.00 0.00 43.07 2.57
2506 6469 5.339530 CCAAGGAGGATCAGAAAACATAGGT 60.340 44.000 0.00 0.00 41.22 3.08
2507 6470 5.365021 AGGAGGATCAGAAAACATAGGTG 57.635 43.478 0.00 0.00 36.25 4.00
2508 6471 4.164988 AGGAGGATCAGAAAACATAGGTGG 59.835 45.833 0.00 0.00 36.25 4.61
2509 6472 4.164221 GGAGGATCAGAAAACATAGGTGGA 59.836 45.833 0.00 0.00 36.25 4.02
2510 6473 5.163152 GGAGGATCAGAAAACATAGGTGGAT 60.163 44.000 0.00 0.00 36.25 3.41
2511 6474 5.688807 AGGATCAGAAAACATAGGTGGATG 58.311 41.667 0.00 0.00 0.00 3.51
2512 6475 4.823989 GGATCAGAAAACATAGGTGGATGG 59.176 45.833 0.00 0.00 0.00 3.51
2513 6476 5.397899 GGATCAGAAAACATAGGTGGATGGA 60.398 44.000 0.00 0.00 0.00 3.41
2514 6477 5.102953 TCAGAAAACATAGGTGGATGGAG 57.897 43.478 0.00 0.00 0.00 3.86
2515 6478 4.782691 TCAGAAAACATAGGTGGATGGAGA 59.217 41.667 0.00 0.00 0.00 3.71
2516 6479 5.104776 TCAGAAAACATAGGTGGATGGAGAG 60.105 44.000 0.00 0.00 0.00 3.20
2517 6480 4.785376 AGAAAACATAGGTGGATGGAGAGT 59.215 41.667 0.00 0.00 0.00 3.24
2518 6481 4.762289 AAACATAGGTGGATGGAGAGTC 57.238 45.455 0.00 0.00 0.00 3.36
2519 6482 3.697190 ACATAGGTGGATGGAGAGTCT 57.303 47.619 0.00 0.00 0.00 3.24
2520 6483 4.816048 ACATAGGTGGATGGAGAGTCTA 57.184 45.455 0.00 0.00 0.00 2.59
2521 6484 5.346782 ACATAGGTGGATGGAGAGTCTAT 57.653 43.478 0.00 0.00 0.00 1.98
2522 6485 5.083122 ACATAGGTGGATGGAGAGTCTATG 58.917 45.833 0.00 0.00 38.76 2.23
2523 6486 2.969628 AGGTGGATGGAGAGTCTATGG 58.030 52.381 0.00 0.00 0.00 2.74
2524 6487 2.520120 AGGTGGATGGAGAGTCTATGGA 59.480 50.000 0.00 0.00 0.00 3.41
2525 6488 3.051803 AGGTGGATGGAGAGTCTATGGAA 60.052 47.826 0.00 0.00 0.00 3.53
2526 6489 3.323403 GGTGGATGGAGAGTCTATGGAAG 59.677 52.174 0.00 0.00 0.00 3.46
2527 6490 2.968574 TGGATGGAGAGTCTATGGAAGC 59.031 50.000 0.00 0.00 0.00 3.86
2528 6491 2.968574 GGATGGAGAGTCTATGGAAGCA 59.031 50.000 0.00 0.00 0.00 3.91
2529 6492 3.389329 GGATGGAGAGTCTATGGAAGCAA 59.611 47.826 0.00 0.00 0.00 3.91
2530 6493 4.502950 GGATGGAGAGTCTATGGAAGCAAG 60.503 50.000 0.00 0.00 0.00 4.01
2531 6494 2.169352 TGGAGAGTCTATGGAAGCAAGC 59.831 50.000 0.00 0.00 0.00 4.01
2532 6495 2.468831 GAGAGTCTATGGAAGCAAGCG 58.531 52.381 0.00 0.00 0.00 4.68
2533 6496 1.137872 AGAGTCTATGGAAGCAAGCGG 59.862 52.381 0.00 0.00 0.00 5.52
2534 6497 0.462759 AGTCTATGGAAGCAAGCGGC 60.463 55.000 0.00 0.00 45.30 6.53
2535 6498 1.153168 TCTATGGAAGCAAGCGGCC 60.153 57.895 0.00 0.00 46.50 6.13
2536 6499 2.124320 TATGGAAGCAAGCGGCCC 60.124 61.111 0.00 0.00 46.50 5.80
2537 6500 2.891941 CTATGGAAGCAAGCGGCCCA 62.892 60.000 0.00 0.00 46.50 5.36
2538 6501 2.891941 TATGGAAGCAAGCGGCCCAG 62.892 60.000 0.00 0.00 46.50 4.45
2552 6515 4.641645 CCAGGGGCTGCGTGTCAA 62.642 66.667 0.00 0.00 0.00 3.18
2553 6516 3.357079 CAGGGGCTGCGTGTCAAC 61.357 66.667 0.00 0.00 0.00 3.18
2554 6517 3.560251 AGGGGCTGCGTGTCAACT 61.560 61.111 0.00 0.00 0.00 3.16
2555 6518 3.357079 GGGGCTGCGTGTCAACTG 61.357 66.667 0.00 0.00 0.00 3.16
2556 6519 2.280797 GGGCTGCGTGTCAACTGA 60.281 61.111 0.00 0.00 0.00 3.41
2557 6520 2.607892 GGGCTGCGTGTCAACTGAC 61.608 63.158 2.78 2.78 44.97 3.51
2565 6528 4.693532 GTCAACTGACATGGCCGA 57.306 55.556 0.00 0.00 44.18 5.54
2566 6529 2.460330 GTCAACTGACATGGCCGAG 58.540 57.895 0.00 0.00 44.18 4.63
2567 6530 0.320771 GTCAACTGACATGGCCGAGT 60.321 55.000 0.00 0.00 44.18 4.18
2568 6531 0.320683 TCAACTGACATGGCCGAGTG 60.321 55.000 4.42 2.81 0.00 3.51
2569 6532 0.603707 CAACTGACATGGCCGAGTGT 60.604 55.000 4.42 6.28 0.00 3.55
2570 6533 0.603707 AACTGACATGGCCGAGTGTG 60.604 55.000 12.32 2.17 0.00 3.82
2571 6534 1.742880 CTGACATGGCCGAGTGTGG 60.743 63.158 12.32 2.91 0.00 4.17
2572 6535 2.347490 GACATGGCCGAGTGTGGT 59.653 61.111 12.32 0.00 0.00 4.16
2573 6536 2.032528 ACATGGCCGAGTGTGGTG 59.967 61.111 7.37 0.00 0.00 4.17
2574 6537 3.434319 CATGGCCGAGTGTGGTGC 61.434 66.667 0.00 0.00 0.00 5.01
2575 6538 4.722700 ATGGCCGAGTGTGGTGCC 62.723 66.667 0.00 0.00 44.27 5.01
2580 6543 4.742201 CGAGTGTGGTGCCCGGAG 62.742 72.222 0.73 0.00 0.00 4.63
2592 6555 2.191128 GCCCGGAGCAATGAATATCT 57.809 50.000 0.73 0.00 42.97 1.98
2593 6556 2.508526 GCCCGGAGCAATGAATATCTT 58.491 47.619 0.73 0.00 42.97 2.40
2594 6557 3.674997 GCCCGGAGCAATGAATATCTTA 58.325 45.455 0.73 0.00 42.97 2.10
2595 6558 4.072131 GCCCGGAGCAATGAATATCTTAA 58.928 43.478 0.73 0.00 42.97 1.85
2596 6559 4.154918 GCCCGGAGCAATGAATATCTTAAG 59.845 45.833 0.73 0.00 42.97 1.85
2597 6560 4.154918 CCCGGAGCAATGAATATCTTAAGC 59.845 45.833 0.73 0.00 0.00 3.09
2598 6561 4.999950 CCGGAGCAATGAATATCTTAAGCT 59.000 41.667 0.00 0.00 0.00 3.74
2599 6562 5.106791 CCGGAGCAATGAATATCTTAAGCTG 60.107 44.000 0.00 0.00 0.00 4.24
2600 6563 5.106791 CGGAGCAATGAATATCTTAAGCTGG 60.107 44.000 0.00 0.00 0.00 4.85
2601 6564 6.000219 GGAGCAATGAATATCTTAAGCTGGA 59.000 40.000 0.00 0.00 0.00 3.86
2602 6565 6.488006 GGAGCAATGAATATCTTAAGCTGGAA 59.512 38.462 0.00 0.00 0.00 3.53
2603 6566 7.176340 GGAGCAATGAATATCTTAAGCTGGAAT 59.824 37.037 0.00 0.00 0.00 3.01
2604 6567 8.474710 AGCAATGAATATCTTAAGCTGGAATT 57.525 30.769 0.00 0.00 0.00 2.17
2605 6568 9.578576 AGCAATGAATATCTTAAGCTGGAATTA 57.421 29.630 0.00 0.00 0.00 1.40
2606 6569 9.617975 GCAATGAATATCTTAAGCTGGAATTAC 57.382 33.333 0.00 0.00 0.00 1.89
2610 6573 9.330063 TGAATATCTTAAGCTGGAATTACTGTG 57.670 33.333 0.00 0.00 0.00 3.66
2611 6574 8.682936 AATATCTTAAGCTGGAATTACTGTGG 57.317 34.615 0.00 0.00 0.00 4.17
2612 6575 5.499004 TCTTAAGCTGGAATTACTGTGGT 57.501 39.130 0.00 0.00 0.00 4.16
2613 6576 5.876357 TCTTAAGCTGGAATTACTGTGGTT 58.124 37.500 0.00 0.00 0.00 3.67
2614 6577 5.705441 TCTTAAGCTGGAATTACTGTGGTTG 59.295 40.000 0.00 0.00 0.00 3.77
2615 6578 3.508845 AGCTGGAATTACTGTGGTTGT 57.491 42.857 0.00 0.00 0.00 3.32
2616 6579 3.149196 AGCTGGAATTACTGTGGTTGTG 58.851 45.455 0.00 0.00 0.00 3.33
2617 6580 2.228822 GCTGGAATTACTGTGGTTGTGG 59.771 50.000 0.00 0.00 0.00 4.17
2618 6581 2.819608 CTGGAATTACTGTGGTTGTGGG 59.180 50.000 0.00 0.00 0.00 4.61
2619 6582 2.443632 TGGAATTACTGTGGTTGTGGGA 59.556 45.455 0.00 0.00 0.00 4.37
2620 6583 3.117474 TGGAATTACTGTGGTTGTGGGAA 60.117 43.478 0.00 0.00 0.00 3.97
2621 6584 4.086457 GGAATTACTGTGGTTGTGGGAAT 58.914 43.478 0.00 0.00 0.00 3.01
2622 6585 4.082245 GGAATTACTGTGGTTGTGGGAATG 60.082 45.833 0.00 0.00 0.00 2.67
2623 6586 1.904287 TACTGTGGTTGTGGGAATGC 58.096 50.000 0.00 0.00 0.00 3.56
2624 6587 0.185901 ACTGTGGTTGTGGGAATGCT 59.814 50.000 0.00 0.00 0.00 3.79
2625 6588 0.599558 CTGTGGTTGTGGGAATGCTG 59.400 55.000 0.00 0.00 0.00 4.41
2626 6589 1.290009 GTGGTTGTGGGAATGCTGC 59.710 57.895 0.00 0.00 0.00 5.25
2627 6590 2.267351 TGGTTGTGGGAATGCTGCG 61.267 57.895 0.00 0.00 0.00 5.18
2628 6591 1.971167 GGTTGTGGGAATGCTGCGA 60.971 57.895 0.00 0.00 0.00 5.10
2629 6592 1.315257 GGTTGTGGGAATGCTGCGAT 61.315 55.000 0.00 0.00 0.00 4.58
2630 6593 1.378531 GTTGTGGGAATGCTGCGATA 58.621 50.000 0.00 0.00 0.00 2.92
2631 6594 1.742831 GTTGTGGGAATGCTGCGATAA 59.257 47.619 0.00 0.00 0.00 1.75
2632 6595 2.346766 TGTGGGAATGCTGCGATAAT 57.653 45.000 0.00 0.00 0.00 1.28
2633 6596 2.653726 TGTGGGAATGCTGCGATAATT 58.346 42.857 0.00 0.00 0.00 1.40
2634 6597 3.023119 TGTGGGAATGCTGCGATAATTT 58.977 40.909 0.00 0.00 0.00 1.82
2635 6598 3.066621 TGTGGGAATGCTGCGATAATTTC 59.933 43.478 0.00 0.00 0.00 2.17
2636 6599 3.316308 GTGGGAATGCTGCGATAATTTCT 59.684 43.478 0.00 0.00 0.00 2.52
2637 6600 3.316029 TGGGAATGCTGCGATAATTTCTG 59.684 43.478 0.00 0.00 0.00 3.02
2638 6601 3.565482 GGGAATGCTGCGATAATTTCTGA 59.435 43.478 0.00 0.00 0.00 3.27
2639 6602 4.036734 GGGAATGCTGCGATAATTTCTGAA 59.963 41.667 0.00 0.00 0.00 3.02
2640 6603 4.972440 GGAATGCTGCGATAATTTCTGAAC 59.028 41.667 0.00 0.00 0.00 3.18
2641 6604 5.220931 GGAATGCTGCGATAATTTCTGAACT 60.221 40.000 0.00 0.00 0.00 3.01
2642 6605 5.824904 ATGCTGCGATAATTTCTGAACTT 57.175 34.783 0.00 0.00 0.00 2.66
2643 6606 5.627499 TGCTGCGATAATTTCTGAACTTT 57.373 34.783 0.00 0.00 0.00 2.66
2644 6607 5.393124 TGCTGCGATAATTTCTGAACTTTG 58.607 37.500 0.00 0.00 0.00 2.77
2645 6608 5.048782 TGCTGCGATAATTTCTGAACTTTGT 60.049 36.000 0.00 0.00 0.00 2.83
2646 6609 6.148645 TGCTGCGATAATTTCTGAACTTTGTA 59.851 34.615 0.00 0.00 0.00 2.41
2647 6610 7.148255 TGCTGCGATAATTTCTGAACTTTGTAT 60.148 33.333 0.00 0.00 0.00 2.29
2648 6611 7.374491 GCTGCGATAATTTCTGAACTTTGTATC 59.626 37.037 0.00 0.00 0.00 2.24
2649 6612 7.693952 TGCGATAATTTCTGAACTTTGTATCC 58.306 34.615 0.00 0.00 0.00 2.59
2650 6613 7.552687 TGCGATAATTTCTGAACTTTGTATCCT 59.447 33.333 0.00 0.00 0.00 3.24
2651 6614 7.852945 GCGATAATTTCTGAACTTTGTATCCTG 59.147 37.037 0.00 0.00 0.00 3.86
2652 6615 8.883731 CGATAATTTCTGAACTTTGTATCCTGT 58.116 33.333 0.00 0.00 0.00 4.00
2654 6617 9.739276 ATAATTTCTGAACTTTGTATCCTGTCA 57.261 29.630 0.00 0.00 0.00 3.58
2655 6618 8.641498 AATTTCTGAACTTTGTATCCTGTCAT 57.359 30.769 0.00 0.00 0.00 3.06
2656 6619 9.739276 AATTTCTGAACTTTGTATCCTGTCATA 57.261 29.630 0.00 0.00 0.00 2.15
2657 6620 8.777865 TTTCTGAACTTTGTATCCTGTCATAG 57.222 34.615 0.00 0.00 0.00 2.23
2659 6622 5.428253 TGAACTTTGTATCCTGTCATAGGC 58.572 41.667 0.00 0.00 46.87 3.93
2660 6623 5.045942 TGAACTTTGTATCCTGTCATAGGCA 60.046 40.000 0.00 0.00 46.87 4.75
2661 6624 4.770795 ACTTTGTATCCTGTCATAGGCAC 58.229 43.478 0.00 0.00 46.87 5.01
2662 6625 4.225042 ACTTTGTATCCTGTCATAGGCACA 59.775 41.667 0.00 0.00 46.87 4.57
2663 6626 5.104360 ACTTTGTATCCTGTCATAGGCACAT 60.104 40.000 0.00 0.00 46.87 3.21
2664 6627 4.607293 TGTATCCTGTCATAGGCACATC 57.393 45.455 0.00 0.00 46.87 3.06
2665 6628 3.966665 TGTATCCTGTCATAGGCACATCA 59.033 43.478 0.00 0.00 46.87 3.07
2666 6629 4.594491 TGTATCCTGTCATAGGCACATCAT 59.406 41.667 0.00 0.00 46.87 2.45
2667 6630 3.758755 TCCTGTCATAGGCACATCATC 57.241 47.619 0.00 0.00 46.87 2.92
2668 6631 2.369860 TCCTGTCATAGGCACATCATCC 59.630 50.000 0.00 0.00 46.87 3.51
2669 6632 2.551721 CCTGTCATAGGCACATCATCCC 60.552 54.545 0.00 0.00 40.38 3.85
2670 6633 2.105306 CTGTCATAGGCACATCATCCCA 59.895 50.000 0.00 0.00 0.00 4.37
2671 6634 2.509131 TGTCATAGGCACATCATCCCAA 59.491 45.455 0.00 0.00 0.00 4.12
2672 6635 3.053768 TGTCATAGGCACATCATCCCAAA 60.054 43.478 0.00 0.00 0.00 3.28
2673 6636 3.567164 GTCATAGGCACATCATCCCAAAG 59.433 47.826 0.00 0.00 0.00 2.77
2674 6637 3.202818 TCATAGGCACATCATCCCAAAGT 59.797 43.478 0.00 0.00 0.00 2.66
2675 6638 2.610438 AGGCACATCATCCCAAAGTT 57.390 45.000 0.00 0.00 0.00 2.66
2676 6639 3.737559 AGGCACATCATCCCAAAGTTA 57.262 42.857 0.00 0.00 0.00 2.24
2677 6640 4.255510 AGGCACATCATCCCAAAGTTAT 57.744 40.909 0.00 0.00 0.00 1.89
2678 6641 4.613437 AGGCACATCATCCCAAAGTTATT 58.387 39.130 0.00 0.00 0.00 1.40
2679 6642 5.025453 AGGCACATCATCCCAAAGTTATTT 58.975 37.500 0.00 0.00 0.00 1.40
2680 6643 5.484998 AGGCACATCATCCCAAAGTTATTTT 59.515 36.000 0.00 0.00 0.00 1.82
2681 6644 5.812127 GGCACATCATCCCAAAGTTATTTTC 59.188 40.000 0.00 0.00 0.00 2.29
2682 6645 5.812127 GCACATCATCCCAAAGTTATTTTCC 59.188 40.000 0.00 0.00 0.00 3.13
2683 6646 6.351286 GCACATCATCCCAAAGTTATTTTCCT 60.351 38.462 0.00 0.00 0.00 3.36
2684 6647 7.260603 CACATCATCCCAAAGTTATTTTCCTC 58.739 38.462 0.00 0.00 0.00 3.71
2685 6648 7.123247 CACATCATCCCAAAGTTATTTTCCTCT 59.877 37.037 0.00 0.00 0.00 3.69
2686 6649 7.340487 ACATCATCCCAAAGTTATTTTCCTCTC 59.660 37.037 0.00 0.00 0.00 3.20
2687 6650 7.032598 TCATCCCAAAGTTATTTTCCTCTCT 57.967 36.000 0.00 0.00 0.00 3.10
2688 6651 6.886459 TCATCCCAAAGTTATTTTCCTCTCTG 59.114 38.462 0.00 0.00 0.00 3.35
2689 6652 6.448369 TCCCAAAGTTATTTTCCTCTCTGA 57.552 37.500 0.00 0.00 0.00 3.27
2690 6653 6.848069 TCCCAAAGTTATTTTCCTCTCTGAA 58.152 36.000 0.00 0.00 0.00 3.02
2691 6654 7.294584 TCCCAAAGTTATTTTCCTCTCTGAAA 58.705 34.615 0.00 0.00 32.60 2.69
2692 6655 7.230712 TCCCAAAGTTATTTTCCTCTCTGAAAC 59.769 37.037 0.00 0.00 34.13 2.78
2693 6656 7.231519 CCCAAAGTTATTTTCCTCTCTGAAACT 59.768 37.037 0.00 0.00 34.13 2.66
2694 6657 8.293157 CCAAAGTTATTTTCCTCTCTGAAACTC 58.707 37.037 0.00 0.00 34.13 3.01
2695 6658 7.659652 AAGTTATTTTCCTCTCTGAAACTCG 57.340 36.000 0.00 0.00 34.13 4.18
2696 6659 6.760291 AGTTATTTTCCTCTCTGAAACTCGT 58.240 36.000 0.00 0.00 34.13 4.18
2697 6660 6.869388 AGTTATTTTCCTCTCTGAAACTCGTC 59.131 38.462 0.00 0.00 34.13 4.20
2698 6661 4.665833 TTTTCCTCTCTGAAACTCGTCA 57.334 40.909 0.00 0.00 34.13 4.35
2699 6662 4.665833 TTTCCTCTCTGAAACTCGTCAA 57.334 40.909 0.00 0.00 29.56 3.18
2700 6663 4.665833 TTCCTCTCTGAAACTCGTCAAA 57.334 40.909 0.00 0.00 0.00 2.69
2701 6664 4.665833 TCCTCTCTGAAACTCGTCAAAA 57.334 40.909 0.00 0.00 0.00 2.44
2702 6665 5.018539 TCCTCTCTGAAACTCGTCAAAAA 57.981 39.130 0.00 0.00 0.00 1.94
2703 6666 4.809426 TCCTCTCTGAAACTCGTCAAAAAC 59.191 41.667 0.00 0.00 0.00 2.43
2704 6667 4.570772 CCTCTCTGAAACTCGTCAAAAACA 59.429 41.667 0.00 0.00 0.00 2.83
2705 6668 5.064707 CCTCTCTGAAACTCGTCAAAAACAA 59.935 40.000 0.00 0.00 0.00 2.83
2706 6669 6.106877 TCTCTGAAACTCGTCAAAAACAAG 57.893 37.500 0.00 0.00 0.00 3.16
2707 6670 5.642063 TCTCTGAAACTCGTCAAAAACAAGT 59.358 36.000 0.00 0.00 0.00 3.16
2708 6671 5.864986 TCTGAAACTCGTCAAAAACAAGTC 58.135 37.500 0.00 0.00 0.00 3.01
2709 6672 4.976987 TGAAACTCGTCAAAAACAAGTCC 58.023 39.130 0.00 0.00 0.00 3.85
2710 6673 3.668596 AACTCGTCAAAAACAAGTCCG 57.331 42.857 0.00 0.00 0.00 4.79
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
188 191 1.473258 TTTCCCCCATTGAATGAGCG 58.527 50.000 6.76 0.00 0.00 5.03
193 196 6.353255 CCATTTTCTCATTTCCCCCATTGAAT 60.353 38.462 0.00 0.00 0.00 2.57
240 243 1.617322 CGATTCGATCCTACTCCCCA 58.383 55.000 0.00 0.00 0.00 4.96
330 344 3.419943 TCATAGTGCATTTTCCACAGCA 58.580 40.909 0.00 0.00 35.69 4.41
349 363 9.458727 AGATTTTGAAAAGCTAGAGATTCATCA 57.541 29.630 6.64 0.00 32.35 3.07
483 497 3.275999 GTTAGTGGGTGGCATTCGTAAT 58.724 45.455 0.00 0.00 0.00 1.89
701 3151 6.526325 CGAAGTGTGTGTTTCAATCAAAAGAA 59.474 34.615 0.00 0.00 0.00 2.52
703 3153 6.027131 TCGAAGTGTGTGTTTCAATCAAAAG 58.973 36.000 0.00 0.00 0.00 2.27
773 3226 0.370273 CGGCGCATTTAGTCTGACAC 59.630 55.000 10.83 0.00 0.00 3.67
774 3227 0.739462 CCGGCGCATTTAGTCTGACA 60.739 55.000 10.83 0.00 0.00 3.58
782 3235 2.004017 CTCTTACAACCGGCGCATTTA 58.996 47.619 10.83 0.00 0.00 1.40
813 3280 5.775701 AGTACAGTCACACAACTCTATTCCT 59.224 40.000 0.00 0.00 0.00 3.36
831 3298 5.529430 CACTACAGAGGGATGAGTAGTACAG 59.471 48.000 2.52 0.00 43.71 2.74
833 3300 4.822896 CCACTACAGAGGGATGAGTAGTAC 59.177 50.000 0.00 0.00 43.71 2.73
873 4666 1.741770 GCTGTCCCGATGTCACCAC 60.742 63.158 0.00 0.00 0.00 4.16
909 4702 4.418392 GTCTAAAAATCTCGTCTACGCCA 58.582 43.478 0.00 0.00 39.60 5.69
1367 5206 2.094752 GGCGTTTATGTGAATGTTGCCT 60.095 45.455 0.00 0.00 37.03 4.75
1575 5414 3.627395 AGCAAATAACTCGATCCACCA 57.373 42.857 0.00 0.00 0.00 4.17
1628 5487 1.412710 CGCTGAGACATTAAGGGGCTA 59.587 52.381 0.00 0.00 0.00 3.93
1631 5490 1.802880 CGACGCTGAGACATTAAGGGG 60.803 57.143 0.00 0.00 0.00 4.79
1716 5671 1.095807 GGGCTGCACGAAGGGAATAC 61.096 60.000 0.50 0.00 0.00 1.89
1719 5674 4.344865 GGGGCTGCACGAAGGGAA 62.345 66.667 0.50 0.00 0.00 3.97
1725 5680 2.431454 ATGATACGGGGCTGCACGA 61.431 57.895 20.03 6.74 0.00 4.35
1730 5685 2.332063 AGAAACATGATACGGGGCTG 57.668 50.000 0.00 0.00 0.00 4.85
1736 5691 9.935682 ATAACATGCTAAAAGAAACATGATACG 57.064 29.630 0.00 0.00 41.93 3.06
1742 5697 8.823220 ACCCTATAACATGCTAAAAGAAACAT 57.177 30.769 0.00 0.00 0.00 2.71
1748 5707 8.082242 GGCAATAACCCTATAACATGCTAAAAG 58.918 37.037 0.00 0.00 33.29 2.27
1775 5734 1.904287 AAGCAATTCACCACGCCTAA 58.096 45.000 0.00 0.00 0.00 2.69
1798 5757 9.533831 AAACATGATTTCTTCCCACTTTATAGT 57.466 29.630 0.00 0.00 34.00 2.12
1800 5759 8.673711 CGAAACATGATTTCTTCCCACTTTATA 58.326 33.333 0.00 0.00 0.00 0.98
1801 5760 7.393234 TCGAAACATGATTTCTTCCCACTTTAT 59.607 33.333 0.00 0.00 0.00 1.40
1802 5761 6.712998 TCGAAACATGATTTCTTCCCACTTTA 59.287 34.615 0.00 0.00 0.00 1.85
1803 5762 5.534654 TCGAAACATGATTTCTTCCCACTTT 59.465 36.000 0.00 0.00 0.00 2.66
1804 5763 5.070001 TCGAAACATGATTTCTTCCCACTT 58.930 37.500 0.00 0.00 0.00 3.16
1807 5766 4.009675 CCTCGAAACATGATTTCTTCCCA 58.990 43.478 0.00 0.00 0.00 4.37
1809 5768 4.938226 ACTCCTCGAAACATGATTTCTTCC 59.062 41.667 0.00 0.00 0.00 3.46
1813 5772 5.179368 TGTCAACTCCTCGAAACATGATTTC 59.821 40.000 0.00 5.27 0.00 2.17
1817 5776 3.744238 TGTCAACTCCTCGAAACATGA 57.256 42.857 0.00 0.00 0.00 3.07
1826 5785 1.351017 TCACCCCATTGTCAACTCCTC 59.649 52.381 0.00 0.00 0.00 3.71
1832 5791 0.536233 CACGGTCACCCCATTGTCAA 60.536 55.000 0.00 0.00 0.00 3.18
1835 5794 2.282180 GCACGGTCACCCCATTGT 60.282 61.111 0.00 0.00 0.00 2.71
1836 5795 2.034066 AGCACGGTCACCCCATTG 59.966 61.111 0.00 0.00 0.00 2.82
1837 5796 2.034066 CAGCACGGTCACCCCATT 59.966 61.111 0.00 0.00 0.00 3.16
1847 5806 4.347453 GCAAACAGGGCAGCACGG 62.347 66.667 0.00 0.00 0.00 4.94
1850 5809 4.577677 TCGGCAAACAGGGCAGCA 62.578 61.111 0.00 0.00 0.00 4.41
1899 5860 3.259876 AGTGATCAACTTTACTACCGGCA 59.740 43.478 0.00 0.00 34.57 5.69
2006 5968 4.911514 ACCACGCTTTATCACTTTGTTT 57.088 36.364 0.00 0.00 0.00 2.83
2014 5976 7.465379 CGATTGAATTTCTACCACGCTTTATCA 60.465 37.037 0.00 0.00 0.00 2.15
2017 5979 5.870433 TCGATTGAATTTCTACCACGCTTTA 59.130 36.000 0.00 0.00 0.00 1.85
2053 6015 3.188048 GCATCACTTCAAGAACACCTGAG 59.812 47.826 0.00 0.00 0.00 3.35
2055 6017 2.096069 CGCATCACTTCAAGAACACCTG 60.096 50.000 0.00 0.00 0.00 4.00
2057 6019 2.143122 TCGCATCACTTCAAGAACACC 58.857 47.619 0.00 0.00 0.00 4.16
2059 6021 3.002791 GGATCGCATCACTTCAAGAACA 58.997 45.455 0.00 0.00 0.00 3.18
2060 6022 2.352960 GGGATCGCATCACTTCAAGAAC 59.647 50.000 4.64 0.00 0.00 3.01
2061 6023 2.632377 GGGATCGCATCACTTCAAGAA 58.368 47.619 4.64 0.00 0.00 2.52
2063 6025 1.303309 GGGGATCGCATCACTTCAAG 58.697 55.000 12.32 0.00 31.86 3.02
2065 6027 1.271127 TGGGGGATCGCATCACTTCA 61.271 55.000 12.32 0.00 31.86 3.02
2066 6028 0.815615 GTGGGGGATCGCATCACTTC 60.816 60.000 20.41 1.17 38.13 3.01
2079 6042 1.000359 GGAGAATGTTGGGTGGGGG 60.000 63.158 0.00 0.00 0.00 5.40
2106 6069 1.660052 CGTGTTCGTGATGGCAAAGTG 60.660 52.381 0.00 0.00 0.00 3.16
2107 6070 0.586319 CGTGTTCGTGATGGCAAAGT 59.414 50.000 0.00 0.00 0.00 2.66
2108 6071 0.865111 TCGTGTTCGTGATGGCAAAG 59.135 50.000 0.00 0.00 38.33 2.77
2129 6092 4.767255 GCCTCCAGTGGCCGTGAG 62.767 72.222 3.51 5.22 46.82 3.51
2140 6103 0.034476 GCATCATCAGATCGCCTCCA 59.966 55.000 0.00 0.00 30.20 3.86
2141 6104 0.034476 TGCATCATCAGATCGCCTCC 59.966 55.000 0.00 0.00 31.51 4.30
2198 6161 8.294577 GGGTGATTAGACGACTAACAAATTTTT 58.705 33.333 9.49 0.00 40.71 1.94
2240 6203 3.325425 TCAACTTGGTGAAAGGATCGGTA 59.675 43.478 0.00 0.00 40.51 4.02
2241 6204 2.105821 TCAACTTGGTGAAAGGATCGGT 59.894 45.455 0.00 0.00 40.51 4.69
2242 6205 2.484264 GTCAACTTGGTGAAAGGATCGG 59.516 50.000 0.00 0.00 40.51 4.18
2243 6206 2.157668 CGTCAACTTGGTGAAAGGATCG 59.842 50.000 0.00 0.00 40.51 3.69
2244 6207 2.484264 CCGTCAACTTGGTGAAAGGATC 59.516 50.000 5.79 0.00 40.51 3.36
2245 6208 2.504367 CCGTCAACTTGGTGAAAGGAT 58.496 47.619 5.79 0.00 40.51 3.24
2246 6209 1.961793 CCGTCAACTTGGTGAAAGGA 58.038 50.000 5.79 0.00 40.51 3.36
2247 6210 0.310854 GCCGTCAACTTGGTGAAAGG 59.689 55.000 6.96 6.96 40.51 3.11
2248 6211 1.002468 CTGCCGTCAACTTGGTGAAAG 60.002 52.381 0.00 0.00 42.07 2.62
2249 6212 1.021202 CTGCCGTCAACTTGGTGAAA 58.979 50.000 0.00 0.00 0.00 2.69
2250 6213 0.179234 TCTGCCGTCAACTTGGTGAA 59.821 50.000 0.00 0.00 0.00 3.18
2251 6214 0.396435 ATCTGCCGTCAACTTGGTGA 59.604 50.000 0.00 0.00 0.00 4.02
2252 6215 0.798776 GATCTGCCGTCAACTTGGTG 59.201 55.000 0.00 0.00 0.00 4.17
2253 6216 0.396435 TGATCTGCCGTCAACTTGGT 59.604 50.000 0.00 0.00 0.00 3.67
2254 6217 1.466167 CTTGATCTGCCGTCAACTTGG 59.534 52.381 0.00 0.00 32.55 3.61
2255 6218 2.146342 ACTTGATCTGCCGTCAACTTG 58.854 47.619 0.00 0.00 32.55 3.16
2256 6219 2.417719 GACTTGATCTGCCGTCAACTT 58.582 47.619 0.00 0.00 32.55 2.66
2257 6220 1.338200 GGACTTGATCTGCCGTCAACT 60.338 52.381 0.00 0.00 32.55 3.16
2258 6221 1.079503 GGACTTGATCTGCCGTCAAC 58.920 55.000 0.00 0.00 32.55 3.18
2259 6222 0.036388 GGGACTTGATCTGCCGTCAA 60.036 55.000 0.00 0.00 34.63 3.18
2260 6223 1.596934 GGGACTTGATCTGCCGTCA 59.403 57.895 0.00 0.00 0.00 4.35
2261 6224 1.153349 GGGGACTTGATCTGCCGTC 60.153 63.158 0.00 0.00 0.00 4.79
2262 6225 1.903877 CTGGGGACTTGATCTGCCGT 61.904 60.000 0.00 0.00 0.00 5.68
2263 6226 1.153289 CTGGGGACTTGATCTGCCG 60.153 63.158 0.00 0.00 0.00 5.69
2264 6227 1.225704 CCTGGGGACTTGATCTGCC 59.774 63.158 0.00 0.00 0.00 4.85
2265 6228 1.452833 GCCTGGGGACTTGATCTGC 60.453 63.158 0.00 0.00 0.00 4.26
2266 6229 0.393537 GTGCCTGGGGACTTGATCTG 60.394 60.000 4.01 0.00 33.56 2.90
2267 6230 1.566298 GGTGCCTGGGGACTTGATCT 61.566 60.000 10.87 0.00 36.67 2.75
2268 6231 1.077429 GGTGCCTGGGGACTTGATC 60.077 63.158 10.87 0.00 36.67 2.92
2269 6232 2.971598 CGGTGCCTGGGGACTTGAT 61.972 63.158 10.87 0.00 36.67 2.57
2270 6233 3.636231 CGGTGCCTGGGGACTTGA 61.636 66.667 10.87 0.00 36.67 3.02
2271 6234 4.722700 CCGGTGCCTGGGGACTTG 62.723 72.222 10.87 4.56 36.67 3.16
2278 6241 4.802051 CATGTCCCCGGTGCCTGG 62.802 72.222 0.00 0.00 0.00 4.45
2279 6242 3.687321 CTCATGTCCCCGGTGCCTG 62.687 68.421 0.00 0.00 0.00 4.85
2280 6243 3.402681 CTCATGTCCCCGGTGCCT 61.403 66.667 0.00 0.00 0.00 4.75
2282 6245 3.918253 TTGCTCATGTCCCCGGTGC 62.918 63.158 0.00 0.00 0.00 5.01
2283 6246 2.040544 GTTGCTCATGTCCCCGGTG 61.041 63.158 0.00 0.00 0.00 4.94
2284 6247 2.351276 GTTGCTCATGTCCCCGGT 59.649 61.111 0.00 0.00 0.00 5.28
2285 6248 2.438434 GGTTGCTCATGTCCCCGG 60.438 66.667 0.00 0.00 0.00 5.73
2286 6249 1.002134 AAGGTTGCTCATGTCCCCG 60.002 57.895 0.00 0.00 0.00 5.73
2287 6250 0.251341 ACAAGGTTGCTCATGTCCCC 60.251 55.000 0.00 0.00 0.00 4.81
2288 6251 2.359900 CTACAAGGTTGCTCATGTCCC 58.640 52.381 0.00 0.00 0.00 4.46
2289 6252 1.740025 GCTACAAGGTTGCTCATGTCC 59.260 52.381 0.00 0.00 32.12 4.02
2290 6253 2.426522 TGCTACAAGGTTGCTCATGTC 58.573 47.619 4.61 0.00 35.51 3.06
2291 6254 2.566833 TGCTACAAGGTTGCTCATGT 57.433 45.000 4.61 0.00 35.51 3.21
2292 6255 2.357009 GGATGCTACAAGGTTGCTCATG 59.643 50.000 4.61 0.00 35.51 3.07
2293 6256 2.240667 AGGATGCTACAAGGTTGCTCAT 59.759 45.455 4.61 0.00 35.51 2.90
2294 6257 1.630369 AGGATGCTACAAGGTTGCTCA 59.370 47.619 4.61 0.00 35.51 4.26
2295 6258 2.409948 AGGATGCTACAAGGTTGCTC 57.590 50.000 4.61 0.75 35.51 4.26
2296 6259 3.434167 CCATAGGATGCTACAAGGTTGCT 60.434 47.826 0.00 0.00 35.51 3.91
2297 6260 2.880890 CCATAGGATGCTACAAGGTTGC 59.119 50.000 0.00 0.00 35.10 4.17
2298 6261 2.880890 GCCATAGGATGCTACAAGGTTG 59.119 50.000 0.00 0.00 0.00 3.77
2299 6262 2.485479 CGCCATAGGATGCTACAAGGTT 60.485 50.000 0.00 0.00 0.00 3.50
2300 6263 1.070758 CGCCATAGGATGCTACAAGGT 59.929 52.381 0.00 0.00 0.00 3.50
2301 6264 1.344438 TCGCCATAGGATGCTACAAGG 59.656 52.381 0.00 0.48 0.00 3.61
2302 6265 2.036475 AGTCGCCATAGGATGCTACAAG 59.964 50.000 0.00 0.00 0.00 3.16
2303 6266 2.035961 GAGTCGCCATAGGATGCTACAA 59.964 50.000 0.00 0.00 0.00 2.41
2304 6267 1.613925 GAGTCGCCATAGGATGCTACA 59.386 52.381 0.00 0.00 0.00 2.74
2305 6268 1.889829 AGAGTCGCCATAGGATGCTAC 59.110 52.381 0.00 0.00 0.00 3.58
2306 6269 1.889170 CAGAGTCGCCATAGGATGCTA 59.111 52.381 0.00 0.00 0.00 3.49
2307 6270 0.678395 CAGAGTCGCCATAGGATGCT 59.322 55.000 0.00 0.00 0.00 3.79
2308 6271 0.676184 TCAGAGTCGCCATAGGATGC 59.324 55.000 0.00 0.00 0.00 3.91
2309 6272 1.683385 TGTCAGAGTCGCCATAGGATG 59.317 52.381 0.00 0.00 0.00 3.51
2310 6273 2.073252 TGTCAGAGTCGCCATAGGAT 57.927 50.000 0.00 0.00 0.00 3.24
2311 6274 1.683385 CATGTCAGAGTCGCCATAGGA 59.317 52.381 0.00 0.00 0.00 2.94
2312 6275 1.269988 CCATGTCAGAGTCGCCATAGG 60.270 57.143 0.00 0.00 0.00 2.57
2313 6276 1.410517 ACCATGTCAGAGTCGCCATAG 59.589 52.381 0.00 0.00 0.00 2.23
2314 6277 1.485124 ACCATGTCAGAGTCGCCATA 58.515 50.000 0.00 0.00 0.00 2.74
2315 6278 1.485124 TACCATGTCAGAGTCGCCAT 58.515 50.000 0.00 0.00 0.00 4.40
2316 6279 1.262417 TTACCATGTCAGAGTCGCCA 58.738 50.000 0.00 0.00 0.00 5.69
2317 6280 2.159099 TCATTACCATGTCAGAGTCGCC 60.159 50.000 0.00 0.00 0.00 5.54
2318 6281 3.165058 TCATTACCATGTCAGAGTCGC 57.835 47.619 0.00 0.00 0.00 5.19
2319 6282 5.408299 TGTTTTCATTACCATGTCAGAGTCG 59.592 40.000 0.00 0.00 0.00 4.18
2320 6283 6.801539 TGTTTTCATTACCATGTCAGAGTC 57.198 37.500 0.00 0.00 0.00 3.36
2321 6284 6.772716 AGTTGTTTTCATTACCATGTCAGAGT 59.227 34.615 0.00 0.00 0.00 3.24
2322 6285 7.041167 TCAGTTGTTTTCATTACCATGTCAGAG 60.041 37.037 0.00 0.00 0.00 3.35
2323 6286 6.770303 TCAGTTGTTTTCATTACCATGTCAGA 59.230 34.615 0.00 0.00 0.00 3.27
2324 6287 6.969366 TCAGTTGTTTTCATTACCATGTCAG 58.031 36.000 0.00 0.00 0.00 3.51
2325 6288 6.951062 TCAGTTGTTTTCATTACCATGTCA 57.049 33.333 0.00 0.00 0.00 3.58
2326 6289 8.081633 TGAATCAGTTGTTTTCATTACCATGTC 58.918 33.333 0.00 0.00 0.00 3.06
2327 6290 7.950512 TGAATCAGTTGTTTTCATTACCATGT 58.049 30.769 0.00 0.00 0.00 3.21
2328 6291 8.084073 ACTGAATCAGTTGTTTTCATTACCATG 58.916 33.333 10.56 0.00 42.59 3.66
2329 6292 8.084073 CACTGAATCAGTTGTTTTCATTACCAT 58.916 33.333 13.99 0.00 42.59 3.55
2330 6293 7.424803 CACTGAATCAGTTGTTTTCATTACCA 58.575 34.615 13.99 0.00 42.59 3.25
2331 6294 6.363357 GCACTGAATCAGTTGTTTTCATTACC 59.637 38.462 13.99 0.00 42.59 2.85
2332 6295 7.113965 CAGCACTGAATCAGTTGTTTTCATTAC 59.886 37.037 13.99 0.00 42.59 1.89
2333 6296 7.140705 CAGCACTGAATCAGTTGTTTTCATTA 58.859 34.615 13.99 0.00 42.59 1.90
2334 6297 5.981315 CAGCACTGAATCAGTTGTTTTCATT 59.019 36.000 13.99 0.00 42.59 2.57
2335 6298 5.508489 CCAGCACTGAATCAGTTGTTTTCAT 60.508 40.000 13.99 0.00 42.59 2.57
2336 6299 4.202040 CCAGCACTGAATCAGTTGTTTTCA 60.202 41.667 13.99 0.00 42.59 2.69
2337 6300 4.293415 CCAGCACTGAATCAGTTGTTTTC 58.707 43.478 13.99 0.00 42.59 2.29
2338 6301 3.068590 CCCAGCACTGAATCAGTTGTTTT 59.931 43.478 13.99 0.00 42.59 2.43
2339 6302 2.624838 CCCAGCACTGAATCAGTTGTTT 59.375 45.455 13.99 0.00 42.59 2.83
2340 6303 2.233271 CCCAGCACTGAATCAGTTGTT 58.767 47.619 13.99 4.92 42.59 2.83
2341 6304 1.546323 CCCCAGCACTGAATCAGTTGT 60.546 52.381 13.99 0.49 42.59 3.32
2342 6305 1.171308 CCCCAGCACTGAATCAGTTG 58.829 55.000 13.99 10.45 42.59 3.16
2343 6306 1.067295 TCCCCAGCACTGAATCAGTT 58.933 50.000 13.99 0.00 42.59 3.16
2344 6307 1.067295 TTCCCCAGCACTGAATCAGT 58.933 50.000 10.56 10.56 46.51 3.41
2345 6308 1.815003 GTTTCCCCAGCACTGAATCAG 59.185 52.381 8.98 8.98 37.52 2.90
2346 6309 1.144708 TGTTTCCCCAGCACTGAATCA 59.855 47.619 0.00 0.00 0.00 2.57
2347 6310 1.909700 TGTTTCCCCAGCACTGAATC 58.090 50.000 0.00 0.00 0.00 2.52
2348 6311 2.610438 ATGTTTCCCCAGCACTGAAT 57.390 45.000 0.00 0.00 0.00 2.57
2349 6312 2.158475 AGAATGTTTCCCCAGCACTGAA 60.158 45.455 0.00 0.00 0.00 3.02
2350 6313 1.425066 AGAATGTTTCCCCAGCACTGA 59.575 47.619 0.00 0.00 0.00 3.41
2351 6314 1.542915 CAGAATGTTTCCCCAGCACTG 59.457 52.381 0.00 0.00 0.00 3.66
2352 6315 1.915141 CAGAATGTTTCCCCAGCACT 58.085 50.000 0.00 0.00 0.00 4.40
2365 6328 5.049167 GTCAGCCTTCTCTATCACAGAATG 58.951 45.833 0.00 0.00 46.00 2.67
2366 6329 4.202101 CGTCAGCCTTCTCTATCACAGAAT 60.202 45.833 0.00 0.00 31.12 2.40
2367 6330 3.129462 CGTCAGCCTTCTCTATCACAGAA 59.871 47.826 0.00 0.00 31.12 3.02
2368 6331 2.685388 CGTCAGCCTTCTCTATCACAGA 59.315 50.000 0.00 0.00 0.00 3.41
2369 6332 2.425312 ACGTCAGCCTTCTCTATCACAG 59.575 50.000 0.00 0.00 0.00 3.66
2370 6333 2.164422 CACGTCAGCCTTCTCTATCACA 59.836 50.000 0.00 0.00 0.00 3.58
2371 6334 2.480416 CCACGTCAGCCTTCTCTATCAC 60.480 54.545 0.00 0.00 0.00 3.06
2372 6335 1.751351 CCACGTCAGCCTTCTCTATCA 59.249 52.381 0.00 0.00 0.00 2.15
2373 6336 2.025155 TCCACGTCAGCCTTCTCTATC 58.975 52.381 0.00 0.00 0.00 2.08
2374 6337 2.028130 CTCCACGTCAGCCTTCTCTAT 58.972 52.381 0.00 0.00 0.00 1.98
2375 6338 1.464734 CTCCACGTCAGCCTTCTCTA 58.535 55.000 0.00 0.00 0.00 2.43
2376 6339 1.254284 CCTCCACGTCAGCCTTCTCT 61.254 60.000 0.00 0.00 0.00 3.10
2377 6340 1.216710 CCTCCACGTCAGCCTTCTC 59.783 63.158 0.00 0.00 0.00 2.87
2378 6341 1.534235 ACCTCCACGTCAGCCTTCT 60.534 57.895 0.00 0.00 0.00 2.85
2379 6342 1.374758 CACCTCCACGTCAGCCTTC 60.375 63.158 0.00 0.00 0.00 3.46
2380 6343 1.194781 ATCACCTCCACGTCAGCCTT 61.195 55.000 0.00 0.00 0.00 4.35
2381 6344 1.608717 GATCACCTCCACGTCAGCCT 61.609 60.000 0.00 0.00 0.00 4.58
2382 6345 1.153549 GATCACCTCCACGTCAGCC 60.154 63.158 0.00 0.00 0.00 4.85
2383 6346 1.153549 GGATCACCTCCACGTCAGC 60.154 63.158 0.00 0.00 44.26 4.26
2391 6354 3.324246 TCCTTCCAGGATCACCTCC 57.676 57.895 0.00 0.00 45.94 4.30
2400 6363 0.332632 TGGCCAAAGATCCTTCCAGG 59.667 55.000 0.61 0.00 36.46 4.45
2401 6364 2.029623 CATGGCCAAAGATCCTTCCAG 58.970 52.381 10.96 0.00 0.00 3.86
2402 6365 1.342275 CCATGGCCAAAGATCCTTCCA 60.342 52.381 10.96 0.00 0.00 3.53
2403 6366 1.342374 ACCATGGCCAAAGATCCTTCC 60.342 52.381 10.96 0.00 0.00 3.46
2404 6367 2.149973 ACCATGGCCAAAGATCCTTC 57.850 50.000 10.96 0.00 0.00 3.46
2405 6368 2.358195 GGTACCATGGCCAAAGATCCTT 60.358 50.000 10.96 0.00 0.00 3.36
2406 6369 1.215423 GGTACCATGGCCAAAGATCCT 59.785 52.381 10.96 0.00 0.00 3.24
2407 6370 1.064017 TGGTACCATGGCCAAAGATCC 60.064 52.381 10.96 11.10 0.00 3.36
2408 6371 2.435372 TGGTACCATGGCCAAAGATC 57.565 50.000 10.96 0.16 0.00 2.75
2419 6382 1.076777 GCTGGGTGCATGGTACCAT 60.077 57.895 22.23 22.23 40.03 3.55
2420 6383 2.354729 GCTGGGTGCATGGTACCA 59.645 61.111 18.99 18.99 40.03 3.25
2429 6392 3.994853 GGCTTGGTTGCTGGGTGC 61.995 66.667 0.00 0.00 43.25 5.01
2430 6393 3.673484 CGGCTTGGTTGCTGGGTG 61.673 66.667 0.00 0.00 35.80 4.61
2434 6397 1.173043 TTTATCCGGCTTGGTTGCTG 58.827 50.000 0.00 0.00 39.52 4.41
2435 6398 1.917872 TTTTATCCGGCTTGGTTGCT 58.082 45.000 0.00 0.00 39.52 3.91
2436 6399 2.734276 TTTTTATCCGGCTTGGTTGC 57.266 45.000 0.00 0.00 39.52 4.17
2452 6415 1.256812 CTCCATCTTGCCCCGTTTTT 58.743 50.000 0.00 0.00 0.00 1.94
2453 6416 0.611896 CCTCCATCTTGCCCCGTTTT 60.612 55.000 0.00 0.00 0.00 2.43
2454 6417 1.000896 CCTCCATCTTGCCCCGTTT 60.001 57.895 0.00 0.00 0.00 3.60
2455 6418 2.231380 ACCTCCATCTTGCCCCGTT 61.231 57.895 0.00 0.00 0.00 4.44
2456 6419 2.610859 ACCTCCATCTTGCCCCGT 60.611 61.111 0.00 0.00 0.00 5.28
2457 6420 2.124570 CACCTCCATCTTGCCCCG 60.125 66.667 0.00 0.00 0.00 5.73
2458 6421 1.077429 GTCACCTCCATCTTGCCCC 60.077 63.158 0.00 0.00 0.00 5.80
2459 6422 0.678048 GTGTCACCTCCATCTTGCCC 60.678 60.000 0.00 0.00 0.00 5.36
2460 6423 0.036732 TGTGTCACCTCCATCTTGCC 59.963 55.000 0.00 0.00 0.00 4.52
2461 6424 1.160137 GTGTGTCACCTCCATCTTGC 58.840 55.000 0.00 0.00 0.00 4.01
2462 6425 2.613977 GGAGTGTGTCACCTCCATCTTG 60.614 54.545 24.53 0.00 34.34 3.02
2463 6426 1.625818 GGAGTGTGTCACCTCCATCTT 59.374 52.381 24.53 0.00 34.34 2.40
2464 6427 1.270907 GGAGTGTGTCACCTCCATCT 58.729 55.000 24.53 6.61 34.34 2.90
2465 6428 0.976641 TGGAGTGTGTCACCTCCATC 59.023 55.000 26.67 11.44 37.04 3.51
2466 6429 1.349026 CTTGGAGTGTGTCACCTCCAT 59.651 52.381 28.95 3.86 39.46 3.41
2467 6430 0.758734 CTTGGAGTGTGTCACCTCCA 59.241 55.000 26.67 26.67 38.70 3.86
2468 6431 0.035458 CCTTGGAGTGTGTCACCTCC 59.965 60.000 23.48 23.48 34.49 4.30
2469 6432 1.001406 CTCCTTGGAGTGTGTCACCTC 59.999 57.143 8.45 11.12 34.49 3.85
2470 6433 1.051812 CTCCTTGGAGTGTGTCACCT 58.948 55.000 8.45 0.00 34.49 4.00
2471 6434 0.035458 CCTCCTTGGAGTGTGTCACC 59.965 60.000 14.77 0.00 38.35 4.02
2472 6435 1.048601 TCCTCCTTGGAGTGTGTCAC 58.951 55.000 14.77 0.00 40.56 3.67
2473 6436 3.550692 TCCTCCTTGGAGTGTGTCA 57.449 52.632 14.77 0.00 40.56 3.58
2482 6445 5.128919 CCTATGTTTTCTGATCCTCCTTGG 58.871 45.833 0.00 0.00 37.10 3.61
2483 6446 5.587844 CACCTATGTTTTCTGATCCTCCTTG 59.412 44.000 0.00 0.00 0.00 3.61
2484 6447 5.339530 CCACCTATGTTTTCTGATCCTCCTT 60.340 44.000 0.00 0.00 0.00 3.36
2485 6448 4.164988 CCACCTATGTTTTCTGATCCTCCT 59.835 45.833 0.00 0.00 0.00 3.69
2486 6449 4.164221 TCCACCTATGTTTTCTGATCCTCC 59.836 45.833 0.00 0.00 0.00 4.30
2487 6450 5.359194 TCCACCTATGTTTTCTGATCCTC 57.641 43.478 0.00 0.00 0.00 3.71
2488 6451 5.398353 CCATCCACCTATGTTTTCTGATCCT 60.398 44.000 0.00 0.00 0.00 3.24
2489 6452 4.823989 CCATCCACCTATGTTTTCTGATCC 59.176 45.833 0.00 0.00 0.00 3.36
2490 6453 5.684704 TCCATCCACCTATGTTTTCTGATC 58.315 41.667 0.00 0.00 0.00 2.92
2491 6454 5.429762 TCTCCATCCACCTATGTTTTCTGAT 59.570 40.000 0.00 0.00 0.00 2.90
2492 6455 4.782691 TCTCCATCCACCTATGTTTTCTGA 59.217 41.667 0.00 0.00 0.00 3.27
2493 6456 5.102953 TCTCCATCCACCTATGTTTTCTG 57.897 43.478 0.00 0.00 0.00 3.02
2494 6457 4.785376 ACTCTCCATCCACCTATGTTTTCT 59.215 41.667 0.00 0.00 0.00 2.52
2495 6458 5.104259 ACTCTCCATCCACCTATGTTTTC 57.896 43.478 0.00 0.00 0.00 2.29
2496 6459 4.785376 AGACTCTCCATCCACCTATGTTTT 59.215 41.667 0.00 0.00 0.00 2.43
2497 6460 4.366267 AGACTCTCCATCCACCTATGTTT 58.634 43.478 0.00 0.00 0.00 2.83
2498 6461 4.000928 AGACTCTCCATCCACCTATGTT 57.999 45.455 0.00 0.00 0.00 2.71
2499 6462 3.697190 AGACTCTCCATCCACCTATGT 57.303 47.619 0.00 0.00 0.00 2.29
2500 6463 4.465660 CCATAGACTCTCCATCCACCTATG 59.534 50.000 0.00 0.00 34.61 2.23
2501 6464 4.358310 TCCATAGACTCTCCATCCACCTAT 59.642 45.833 0.00 0.00 0.00 2.57
2502 6465 3.727391 TCCATAGACTCTCCATCCACCTA 59.273 47.826 0.00 0.00 0.00 3.08
2503 6466 2.520120 TCCATAGACTCTCCATCCACCT 59.480 50.000 0.00 0.00 0.00 4.00
2504 6467 2.964209 TCCATAGACTCTCCATCCACC 58.036 52.381 0.00 0.00 0.00 4.61
2505 6468 3.244044 GCTTCCATAGACTCTCCATCCAC 60.244 52.174 0.00 0.00 0.00 4.02
2506 6469 2.968574 GCTTCCATAGACTCTCCATCCA 59.031 50.000 0.00 0.00 0.00 3.41
2507 6470 2.968574 TGCTTCCATAGACTCTCCATCC 59.031 50.000 0.00 0.00 0.00 3.51
2508 6471 4.630111 CTTGCTTCCATAGACTCTCCATC 58.370 47.826 0.00 0.00 0.00 3.51
2509 6472 3.181456 GCTTGCTTCCATAGACTCTCCAT 60.181 47.826 0.00 0.00 0.00 3.41
2510 6473 2.169352 GCTTGCTTCCATAGACTCTCCA 59.831 50.000 0.00 0.00 0.00 3.86
2511 6474 2.801342 CGCTTGCTTCCATAGACTCTCC 60.801 54.545 0.00 0.00 0.00 3.71
2512 6475 2.468831 CGCTTGCTTCCATAGACTCTC 58.531 52.381 0.00 0.00 0.00 3.20
2513 6476 1.137872 CCGCTTGCTTCCATAGACTCT 59.862 52.381 0.00 0.00 0.00 3.24
2514 6477 1.576356 CCGCTTGCTTCCATAGACTC 58.424 55.000 0.00 0.00 0.00 3.36
2515 6478 0.462759 GCCGCTTGCTTCCATAGACT 60.463 55.000 0.00 0.00 36.87 3.24
2516 6479 1.440145 GGCCGCTTGCTTCCATAGAC 61.440 60.000 0.00 0.00 40.92 2.59
2517 6480 1.153168 GGCCGCTTGCTTCCATAGA 60.153 57.895 0.00 0.00 40.92 1.98
2518 6481 2.189499 GGGCCGCTTGCTTCCATAG 61.189 63.158 0.00 0.00 40.92 2.23
2519 6482 2.124320 GGGCCGCTTGCTTCCATA 60.124 61.111 0.00 0.00 40.92 2.74
2520 6483 4.365111 TGGGCCGCTTGCTTCCAT 62.365 61.111 0.00 0.00 40.92 3.41
2535 6498 4.641645 TTGACACGCAGCCCCTGG 62.642 66.667 0.00 0.00 31.21 4.45
2536 6499 3.357079 GTTGACACGCAGCCCCTG 61.357 66.667 0.00 0.00 34.12 4.45
2537 6500 3.560251 AGTTGACACGCAGCCCCT 61.560 61.111 0.00 0.00 0.00 4.79
2538 6501 3.357079 CAGTTGACACGCAGCCCC 61.357 66.667 0.00 0.00 0.00 5.80
2539 6502 2.280797 TCAGTTGACACGCAGCCC 60.281 61.111 0.00 0.00 0.00 5.19
2540 6503 2.939022 GTCAGTTGACACGCAGCC 59.061 61.111 7.37 0.00 44.18 4.85
2548 6511 0.320771 ACTCGGCCATGTCAGTTGAC 60.321 55.000 2.24 5.33 44.97 3.18
2549 6512 0.320683 CACTCGGCCATGTCAGTTGA 60.321 55.000 2.24 0.00 0.00 3.18
2550 6513 0.603707 ACACTCGGCCATGTCAGTTG 60.604 55.000 2.24 0.00 0.00 3.16
2551 6514 0.603707 CACACTCGGCCATGTCAGTT 60.604 55.000 2.24 0.00 0.00 3.16
2552 6515 1.004560 CACACTCGGCCATGTCAGT 60.005 57.895 2.24 0.00 0.00 3.41
2553 6516 1.742880 CCACACTCGGCCATGTCAG 60.743 63.158 2.24 0.00 0.00 3.51
2554 6517 2.347114 CCACACTCGGCCATGTCA 59.653 61.111 2.24 0.00 0.00 3.58
2555 6518 2.034879 CACCACACTCGGCCATGTC 61.035 63.158 2.24 0.00 0.00 3.06
2556 6519 2.032528 CACCACACTCGGCCATGT 59.967 61.111 2.24 0.00 0.00 3.21
2557 6520 3.434319 GCACCACACTCGGCCATG 61.434 66.667 2.24 0.00 0.00 3.66
2558 6521 4.722700 GGCACCACACTCGGCCAT 62.723 66.667 2.24 0.00 45.70 4.40
2573 6536 2.191128 AGATATTCATTGCTCCGGGC 57.809 50.000 0.00 4.52 42.22 6.13
2574 6537 4.154918 GCTTAAGATATTCATTGCTCCGGG 59.845 45.833 6.67 0.00 0.00 5.73
2575 6538 4.999950 AGCTTAAGATATTCATTGCTCCGG 59.000 41.667 6.67 0.00 0.00 5.14
2576 6539 5.106791 CCAGCTTAAGATATTCATTGCTCCG 60.107 44.000 6.67 0.00 0.00 4.63
2577 6540 6.000219 TCCAGCTTAAGATATTCATTGCTCC 59.000 40.000 6.67 0.00 0.00 4.70
2578 6541 7.502120 TTCCAGCTTAAGATATTCATTGCTC 57.498 36.000 6.67 0.00 0.00 4.26
2579 6542 8.474710 AATTCCAGCTTAAGATATTCATTGCT 57.525 30.769 6.67 0.00 0.00 3.91
2580 6543 9.617975 GTAATTCCAGCTTAAGATATTCATTGC 57.382 33.333 6.67 0.00 0.00 3.56
2584 6547 9.330063 CACAGTAATTCCAGCTTAAGATATTCA 57.670 33.333 6.67 0.00 0.00 2.57
2585 6548 8.778358 CCACAGTAATTCCAGCTTAAGATATTC 58.222 37.037 6.67 0.00 0.00 1.75
2586 6549 8.275040 ACCACAGTAATTCCAGCTTAAGATATT 58.725 33.333 6.67 0.00 0.00 1.28
2587 6550 7.806180 ACCACAGTAATTCCAGCTTAAGATAT 58.194 34.615 6.67 0.00 0.00 1.63
2588 6551 7.195374 ACCACAGTAATTCCAGCTTAAGATA 57.805 36.000 6.67 0.00 0.00 1.98
2589 6552 6.067217 ACCACAGTAATTCCAGCTTAAGAT 57.933 37.500 6.67 0.00 0.00 2.40
2590 6553 5.499004 ACCACAGTAATTCCAGCTTAAGA 57.501 39.130 6.67 0.00 0.00 2.10
2591 6554 5.473504 ACAACCACAGTAATTCCAGCTTAAG 59.526 40.000 0.00 0.00 0.00 1.85
2592 6555 5.240623 CACAACCACAGTAATTCCAGCTTAA 59.759 40.000 0.00 0.00 0.00 1.85
2593 6556 4.759693 CACAACCACAGTAATTCCAGCTTA 59.240 41.667 0.00 0.00 0.00 3.09
2594 6557 3.569701 CACAACCACAGTAATTCCAGCTT 59.430 43.478 0.00 0.00 0.00 3.74
2595 6558 3.149196 CACAACCACAGTAATTCCAGCT 58.851 45.455 0.00 0.00 0.00 4.24
2596 6559 2.228822 CCACAACCACAGTAATTCCAGC 59.771 50.000 0.00 0.00 0.00 4.85
2597 6560 2.819608 CCCACAACCACAGTAATTCCAG 59.180 50.000 0.00 0.00 0.00 3.86
2598 6561 2.443632 TCCCACAACCACAGTAATTCCA 59.556 45.455 0.00 0.00 0.00 3.53
2599 6562 3.149005 TCCCACAACCACAGTAATTCC 57.851 47.619 0.00 0.00 0.00 3.01
2600 6563 4.618227 GCATTCCCACAACCACAGTAATTC 60.618 45.833 0.00 0.00 0.00 2.17
2601 6564 3.258123 GCATTCCCACAACCACAGTAATT 59.742 43.478 0.00 0.00 0.00 1.40
2602 6565 2.825532 GCATTCCCACAACCACAGTAAT 59.174 45.455 0.00 0.00 0.00 1.89
2603 6566 2.158534 AGCATTCCCACAACCACAGTAA 60.159 45.455 0.00 0.00 0.00 2.24
2604 6567 1.423541 AGCATTCCCACAACCACAGTA 59.576 47.619 0.00 0.00 0.00 2.74
2605 6568 0.185901 AGCATTCCCACAACCACAGT 59.814 50.000 0.00 0.00 0.00 3.55
2606 6569 0.599558 CAGCATTCCCACAACCACAG 59.400 55.000 0.00 0.00 0.00 3.66
2607 6570 1.462731 GCAGCATTCCCACAACCACA 61.463 55.000 0.00 0.00 0.00 4.17
2608 6571 1.290009 GCAGCATTCCCACAACCAC 59.710 57.895 0.00 0.00 0.00 4.16
2609 6572 2.267351 CGCAGCATTCCCACAACCA 61.267 57.895 0.00 0.00 0.00 3.67
2610 6573 1.315257 ATCGCAGCATTCCCACAACC 61.315 55.000 0.00 0.00 0.00 3.77
2611 6574 1.378531 TATCGCAGCATTCCCACAAC 58.621 50.000 0.00 0.00 0.00 3.32
2612 6575 2.121291 TTATCGCAGCATTCCCACAA 57.879 45.000 0.00 0.00 0.00 3.33
2613 6576 2.346766 ATTATCGCAGCATTCCCACA 57.653 45.000 0.00 0.00 0.00 4.17
2614 6577 3.316308 AGAAATTATCGCAGCATTCCCAC 59.684 43.478 0.00 0.00 0.00 4.61
2615 6578 3.316029 CAGAAATTATCGCAGCATTCCCA 59.684 43.478 0.00 0.00 0.00 4.37
2616 6579 3.565482 TCAGAAATTATCGCAGCATTCCC 59.435 43.478 0.00 0.00 0.00 3.97
2617 6580 4.818534 TCAGAAATTATCGCAGCATTCC 57.181 40.909 0.00 0.00 0.00 3.01
2618 6581 5.814783 AGTTCAGAAATTATCGCAGCATTC 58.185 37.500 0.00 0.00 0.00 2.67
2619 6582 5.824904 AGTTCAGAAATTATCGCAGCATT 57.175 34.783 0.00 0.00 0.00 3.56
2620 6583 5.824904 AAGTTCAGAAATTATCGCAGCAT 57.175 34.783 0.00 0.00 0.00 3.79
2621 6584 5.048782 ACAAAGTTCAGAAATTATCGCAGCA 60.049 36.000 0.00 0.00 0.00 4.41
2622 6585 5.393962 ACAAAGTTCAGAAATTATCGCAGC 58.606 37.500 0.00 0.00 0.00 5.25
2623 6586 7.852945 GGATACAAAGTTCAGAAATTATCGCAG 59.147 37.037 0.00 0.00 0.00 5.18
2624 6587 7.552687 AGGATACAAAGTTCAGAAATTATCGCA 59.447 33.333 0.00 0.00 41.41 5.10
2625 6588 7.852945 CAGGATACAAAGTTCAGAAATTATCGC 59.147 37.037 0.00 0.00 41.41 4.58
2626 6589 8.883731 ACAGGATACAAAGTTCAGAAATTATCG 58.116 33.333 0.00 0.00 41.41 2.92
2628 6591 9.739276 TGACAGGATACAAAGTTCAGAAATTAT 57.261 29.630 0.00 0.00 41.41 1.28
2629 6592 9.739276 ATGACAGGATACAAAGTTCAGAAATTA 57.261 29.630 0.00 0.00 41.41 1.40
2630 6593 8.641498 ATGACAGGATACAAAGTTCAGAAATT 57.359 30.769 0.00 0.00 41.41 1.82
2631 6594 9.388506 CTATGACAGGATACAAAGTTCAGAAAT 57.611 33.333 0.00 0.00 41.41 2.17
2632 6595 8.777865 CTATGACAGGATACAAAGTTCAGAAA 57.222 34.615 0.00 0.00 41.41 2.52
2649 6612 2.105306 TGGGATGATGTGCCTATGACAG 59.895 50.000 0.00 0.00 39.48 3.51
2650 6613 2.126057 TGGGATGATGTGCCTATGACA 58.874 47.619 0.00 0.00 39.48 3.58
2651 6614 2.936919 TGGGATGATGTGCCTATGAC 57.063 50.000 0.00 0.00 39.48 3.06
2652 6615 3.202818 ACTTTGGGATGATGTGCCTATGA 59.797 43.478 0.00 0.00 39.48 2.15
2653 6616 3.559069 ACTTTGGGATGATGTGCCTATG 58.441 45.455 0.00 0.00 39.48 2.23
2654 6617 3.959495 ACTTTGGGATGATGTGCCTAT 57.041 42.857 0.00 0.00 39.48 2.57
2655 6618 3.737559 AACTTTGGGATGATGTGCCTA 57.262 42.857 0.00 0.00 39.48 3.93
2656 6619 2.610438 AACTTTGGGATGATGTGCCT 57.390 45.000 0.00 0.00 39.48 4.75
2657 6620 5.343307 AAATAACTTTGGGATGATGTGCC 57.657 39.130 0.00 0.00 39.14 5.01
2658 6621 5.812127 GGAAAATAACTTTGGGATGATGTGC 59.188 40.000 0.00 0.00 0.00 4.57
2659 6622 7.123247 AGAGGAAAATAACTTTGGGATGATGTG 59.877 37.037 0.00 0.00 0.00 3.21
2660 6623 7.184862 AGAGGAAAATAACTTTGGGATGATGT 58.815 34.615 0.00 0.00 0.00 3.06
2661 6624 7.559170 AGAGAGGAAAATAACTTTGGGATGATG 59.441 37.037 0.00 0.00 0.00 3.07
2662 6625 7.559170 CAGAGAGGAAAATAACTTTGGGATGAT 59.441 37.037 0.00 0.00 0.00 2.45
2663 6626 6.886459 CAGAGAGGAAAATAACTTTGGGATGA 59.114 38.462 0.00 0.00 0.00 2.92
2664 6627 6.886459 TCAGAGAGGAAAATAACTTTGGGATG 59.114 38.462 0.00 0.00 0.00 3.51
2665 6628 7.032598 TCAGAGAGGAAAATAACTTTGGGAT 57.967 36.000 0.00 0.00 0.00 3.85
2666 6629 6.448369 TCAGAGAGGAAAATAACTTTGGGA 57.552 37.500 0.00 0.00 0.00 4.37
2667 6630 7.231519 AGTTTCAGAGAGGAAAATAACTTTGGG 59.768 37.037 0.00 0.00 38.41 4.12
2668 6631 8.171164 AGTTTCAGAGAGGAAAATAACTTTGG 57.829 34.615 0.00 0.00 38.41 3.28
2669 6632 8.012241 CGAGTTTCAGAGAGGAAAATAACTTTG 58.988 37.037 0.00 0.00 38.41 2.77
2670 6633 7.715686 ACGAGTTTCAGAGAGGAAAATAACTTT 59.284 33.333 0.00 0.00 38.41 2.66
2671 6634 7.217906 ACGAGTTTCAGAGAGGAAAATAACTT 58.782 34.615 0.00 0.00 38.41 2.66
2672 6635 6.760291 ACGAGTTTCAGAGAGGAAAATAACT 58.240 36.000 0.00 0.00 38.41 2.24
2673 6636 6.645415 TGACGAGTTTCAGAGAGGAAAATAAC 59.355 38.462 0.00 0.00 38.41 1.89
2674 6637 6.755206 TGACGAGTTTCAGAGAGGAAAATAA 58.245 36.000 0.00 0.00 38.41 1.40
2675 6638 6.340962 TGACGAGTTTCAGAGAGGAAAATA 57.659 37.500 0.00 0.00 38.41 1.40
2676 6639 5.215252 TGACGAGTTTCAGAGAGGAAAAT 57.785 39.130 0.00 0.00 38.41 1.82
2677 6640 4.665833 TGACGAGTTTCAGAGAGGAAAA 57.334 40.909 0.00 0.00 38.41 2.29
2678 6641 4.665833 TTGACGAGTTTCAGAGAGGAAA 57.334 40.909 0.00 0.00 34.56 3.13
2679 6642 4.665833 TTTGACGAGTTTCAGAGAGGAA 57.334 40.909 0.00 0.00 0.00 3.36
2680 6643 4.665833 TTTTGACGAGTTTCAGAGAGGA 57.334 40.909 0.00 0.00 0.00 3.71
2681 6644 4.570772 TGTTTTTGACGAGTTTCAGAGAGG 59.429 41.667 0.00 0.00 0.00 3.69
2682 6645 5.718649 TGTTTTTGACGAGTTTCAGAGAG 57.281 39.130 0.00 0.00 0.00 3.20
2683 6646 6.106877 CTTGTTTTTGACGAGTTTCAGAGA 57.893 37.500 0.00 0.00 35.39 3.10


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.