Multiple sequence alignment - TraesCS5D01G023400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G023400 chr5D 100.000 5977 0 0 1 5977 18172064 18178040 0.000000e+00 11038.0
1 TraesCS5D01G023400 chr5D 86.129 1860 106 52 1849 3594 500444228 500442407 0.000000e+00 1866.0
2 TraesCS5D01G023400 chr5D 87.485 1646 133 31 3628 5224 500442305 500440684 0.000000e+00 1831.0
3 TraesCS5D01G023400 chr5D 90.472 1249 91 7 628 1848 500445535 500444287 0.000000e+00 1622.0
4 TraesCS5D01G023400 chr5D 89.305 1122 108 6 628 1740 562722109 562723227 0.000000e+00 1397.0
5 TraesCS5D01G023400 chr5D 89.644 618 35 9 4618 5226 562830806 562831403 0.000000e+00 760.0
6 TraesCS5D01G023400 chr5D 88.997 618 40 8 4618 5227 562821639 562822236 0.000000e+00 739.0
7 TraesCS5D01G023400 chr5D 96.389 360 13 0 2595 2954 562724160 562724519 1.430000e-165 593.0
8 TraesCS5D01G023400 chr5D 85.993 564 59 16 3920 4471 562725421 562725976 2.400000e-163 586.0
9 TraesCS5D01G023400 chr5D 86.096 561 51 12 3053 3586 562724607 562725167 4.020000e-161 579.0
10 TraesCS5D01G023400 chr5D 82.306 633 88 20 4600 5224 562726058 562726674 1.480000e-145 527.0
11 TraesCS5D01G023400 chr5D 92.683 164 12 0 3652 3815 562725190 562725353 2.780000e-58 237.0
12 TraesCS5D01G023400 chr5D 89.051 137 12 2 2399 2535 562724012 562724145 3.710000e-37 167.0
13 TraesCS5D01G023400 chr5D 91.765 85 7 0 5239 5323 500440638 500440554 1.050000e-22 119.0
14 TraesCS5D01G023400 chr5D 76.842 190 36 6 3176 3361 255376406 255376591 3.810000e-17 100.0
15 TraesCS5D01G023400 chr5D 86.905 84 11 0 2244 2327 562723801 562723884 1.770000e-15 95.3
16 TraesCS5D01G023400 chr5A 96.948 3506 78 7 1849 5351 11939548 11943027 0.000000e+00 5854.0
17 TraesCS5D01G023400 chr5A 98.608 1221 17 0 628 1848 11938269 11939489 0.000000e+00 2161.0
18 TraesCS5D01G023400 chr5A 87.030 1835 113 50 1849 3592 626969726 626967926 0.000000e+00 1954.0
19 TraesCS5D01G023400 chr5A 86.526 1759 167 32 3628 5323 626967821 626966070 0.000000e+00 1871.0
20 TraesCS5D01G023400 chr5A 90.248 1251 92 6 628 1848 626971035 626969785 0.000000e+00 1607.0
21 TraesCS5D01G023400 chr5A 96.648 179 6 0 5391 5569 11943029 11943207 1.260000e-76 298.0
22 TraesCS5D01G023400 chr5A 94.521 73 4 0 5905 5977 5283813 5283885 4.900000e-21 113.0
23 TraesCS5D01G023400 chr4A 90.071 1964 129 33 3624 5569 615695694 615693779 0.000000e+00 2486.0
24 TraesCS5D01G023400 chr4A 94.767 1223 62 1 628 1848 615698770 615697548 0.000000e+00 1903.0
25 TraesCS5D01G023400 chr4A 93.548 806 32 4 2598 3403 615696775 615695990 0.000000e+00 1182.0
26 TraesCS5D01G023400 chr4A 92.192 730 45 7 1849 2576 615697489 615696770 0.000000e+00 1022.0
27 TraesCS5D01G023400 chr4A 87.994 658 49 11 1 628 158584379 158583722 0.000000e+00 750.0
28 TraesCS5D01G023400 chr4A 91.346 208 17 1 3385 3592 615695968 615695762 3.530000e-72 283.0
29 TraesCS5D01G023400 chr4A 93.452 168 10 1 5588 5754 517406638 517406471 1.290000e-61 248.0
30 TraesCS5D01G023400 chr5B 86.782 1846 112 51 1849 3594 621844799 621842986 0.000000e+00 1936.0
31 TraesCS5D01G023400 chr5B 87.743 1648 131 36 3631 5224 621842882 621841252 0.000000e+00 1858.0
32 TraesCS5D01G023400 chr5B 89.688 1251 99 14 628 1848 621846108 621844858 0.000000e+00 1568.0
33 TraesCS5D01G023400 chr5B 88.202 1246 109 18 629 1848 712967753 712968986 0.000000e+00 1452.0
34 TraesCS5D01G023400 chr5B 85.069 797 55 26 3053 3815 712970619 712971385 0.000000e+00 754.0
35 TraesCS5D01G023400 chr5B 90.172 580 34 17 2400 2960 712969965 712970540 0.000000e+00 734.0
36 TraesCS5D01G023400 chr5B 81.847 639 91 18 4600 5224 712972110 712972737 1.150000e-141 514.0
37 TraesCS5D01G023400 chr5B 86.500 400 37 11 3897 4286 712971415 712971807 1.990000e-114 424.0
38 TraesCS5D01G023400 chr5B 83.797 395 55 7 1939 2326 712969469 712969861 3.400000e-97 366.0
39 TraesCS5D01G023400 chr5B 81.181 271 23 15 2037 2307 42459861 42460103 6.110000e-45 193.0
40 TraesCS5D01G023400 chr5B 76.524 328 28 18 2388 2696 42460287 42460584 3.760000e-27 134.0
41 TraesCS5D01G023400 chr5B 93.846 65 4 0 5881 5945 286697587 286697523 1.370000e-16 99.0
42 TraesCS5D01G023400 chr5B 93.846 65 3 1 5881 5945 286697778 286697715 4.930000e-16 97.1
43 TraesCS5D01G023400 chr7B 88.591 1008 81 26 2399 3384 46451 45456 0.000000e+00 1194.0
44 TraesCS5D01G023400 chr7B 85.539 1141 140 14 628 1744 103895914 103894775 0.000000e+00 1170.0
45 TraesCS5D01G023400 chr7B 90.815 871 79 1 628 1497 48431 47561 0.000000e+00 1164.0
46 TraesCS5D01G023400 chr7B 83.284 1005 114 32 2402 3375 103893912 103892931 0.000000e+00 876.0
47 TraesCS5D01G023400 chr7B 82.346 878 125 20 3652 4513 103892389 103891526 0.000000e+00 736.0
48 TraesCS5D01G023400 chr7B 81.744 860 99 33 3655 4471 45161 44317 0.000000e+00 665.0
49 TraesCS5D01G023400 chr7B 82.019 634 89 19 4600 5224 44243 43626 3.190000e-142 516.0
50 TraesCS5D01G023400 chr7B 85.473 296 25 10 1559 1848 47360 47077 5.860000e-75 292.0
51 TraesCS5D01G023400 chr7B 77.521 476 68 21 1849 2302 103894574 103894116 3.580000e-62 250.0
52 TraesCS5D01G023400 chr7B 93.902 164 10 0 5591 5754 677889231 677889394 1.290000e-61 248.0
53 TraesCS5D01G023400 chr7B 82.470 251 17 16 2058 2307 735289560 735289336 1.700000e-45 195.0
54 TraesCS5D01G023400 chr7B 87.500 144 18 0 3428 3571 103892715 103892572 3.710000e-37 167.0
55 TraesCS5D01G023400 chr7B 94.845 97 5 0 5881 5977 508142470 508142374 1.040000e-32 152.0
56 TraesCS5D01G023400 chr7B 76.716 335 27 12 2388 2702 735289152 735288849 8.080000e-29 139.0
57 TraesCS5D01G023400 chr7B 76.562 192 43 2 3174 3364 646047123 646046933 2.950000e-18 104.0
58 TraesCS5D01G023400 chr7B 78.528 163 27 6 3206 3364 645591722 645591564 3.810000e-17 100.0
59 TraesCS5D01G023400 chr4D 99.364 629 4 0 1 629 190959426 190960054 0.000000e+00 1140.0
60 TraesCS5D01G023400 chr4D 90.761 184 13 4 5584 5767 479687428 479687249 5.980000e-60 243.0
61 TraesCS5D01G023400 chr7D 99.204 628 5 0 1 628 78298671 78299298 0.000000e+00 1133.0
62 TraesCS5D01G023400 chr7D 87.927 878 104 2 628 1504 138426549 138425673 0.000000e+00 1033.0
63 TraesCS5D01G023400 chr7D 95.312 640 15 2 1 628 25949045 25949681 0.000000e+00 1002.0
64 TraesCS5D01G023400 chr7D 83.168 1010 114 21 2402 3379 138424528 138423543 0.000000e+00 872.0
65 TraesCS5D01G023400 chr7D 82.494 874 122 21 3652 4510 138423007 138422150 0.000000e+00 737.0
66 TraesCS5D01G023400 chr7D 86.111 144 20 0 3428 3571 138423333 138423190 8.020000e-34 156.0
67 TraesCS5D01G023400 chr7D 79.141 163 26 6 3206 3364 579792195 579792037 8.190000e-19 106.0
68 TraesCS5D01G023400 chr2D 99.046 629 6 0 1 629 631171603 631170975 0.000000e+00 1129.0
69 TraesCS5D01G023400 chr2D 94.012 167 10 0 5592 5758 87407526 87407360 2.760000e-63 254.0
70 TraesCS5D01G023400 chr2D 92.982 171 12 0 5585 5755 520539412 520539242 3.580000e-62 250.0
71 TraesCS5D01G023400 chr2D 89.691 97 7 1 5881 5977 382447272 382447365 2.930000e-23 121.0
72 TraesCS5D01G023400 chr1D 98.726 628 8 0 1 628 19678371 19677744 0.000000e+00 1116.0
73 TraesCS5D01G023400 chr6D 98.089 628 12 0 1 628 468692524 468691897 0.000000e+00 1094.0
74 TraesCS5D01G023400 chr6D 93.814 97 6 0 5881 5977 21833350 21833254 4.830000e-31 147.0
75 TraesCS5D01G023400 chr3D 96.825 630 9 1 1 630 4653498 4652880 0.000000e+00 1042.0
76 TraesCS5D01G023400 chr3D 95.781 640 15 1 1 628 595789290 595789929 0.000000e+00 1022.0
77 TraesCS5D01G023400 chr3D 94.512 164 9 0 5593 5756 595025137 595024974 2.760000e-63 254.0
78 TraesCS5D01G023400 chr3D 93.413 167 11 0 5592 5758 459077268 459077434 1.290000e-61 248.0
79 TraesCS5D01G023400 chr2A 89.802 657 40 8 1 630 607473802 607474458 0.000000e+00 817.0
80 TraesCS5D01G023400 chr7A 82.037 913 130 22 3652 4548 138503611 138502717 0.000000e+00 747.0
81 TraesCS5D01G023400 chr7A 77.941 476 73 19 1849 2302 138508027 138507562 9.870000e-68 268.0
82 TraesCS5D01G023400 chr7A 85.294 170 22 3 3428 3594 138503918 138503749 7.960000e-39 172.0
83 TraesCS5D01G023400 chr2B 80.924 844 119 30 3655 4475 787756295 787757119 3.930000e-176 628.0
84 TraesCS5D01G023400 chr2B 86.650 397 44 4 2997 3384 787755526 787755922 1.190000e-116 431.0
85 TraesCS5D01G023400 chr6B 93.452 168 10 1 5588 5754 119526976 119526809 1.290000e-61 248.0
86 TraesCS5D01G023400 chr6B 94.845 97 5 0 5881 5977 36058349 36058253 1.040000e-32 152.0
87 TraesCS5D01G023400 chr6B 95.455 88 4 0 5881 5968 107079153 107079240 2.250000e-29 141.0
88 TraesCS5D01G023400 chr4B 93.902 164 10 0 5593 5756 344463459 344463296 1.290000e-61 248.0
89 TraesCS5D01G023400 chr4B 77.005 187 35 6 3182 3364 43218099 43217917 3.810000e-17 100.0
90 TraesCS5D01G023400 chr1B 90.526 95 7 2 5885 5977 58873724 58873818 2.260000e-24 124.0
91 TraesCS5D01G023400 chr1B 100.000 54 0 0 5924 5977 562544027 562543974 3.810000e-17 100.0
92 TraesCS5D01G023400 chr1B 98.148 54 1 0 5924 5977 562561514 562561461 1.770000e-15 95.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G023400 chr5D 18172064 18178040 5976 False 11038.000000 11038 100.000000 1 5977 1 chr5D.!!$F1 5976
1 TraesCS5D01G023400 chr5D 500440554 500445535 4981 True 1359.500000 1866 88.962750 628 5323 4 chr5D.!!$R1 4695
2 TraesCS5D01G023400 chr5D 562830806 562831403 597 False 760.000000 760 89.644000 4618 5226 1 chr5D.!!$F4 608
3 TraesCS5D01G023400 chr5D 562821639 562822236 597 False 739.000000 739 88.997000 4618 5227 1 chr5D.!!$F3 609
4 TraesCS5D01G023400 chr5D 562722109 562726674 4565 False 522.662500 1397 88.591000 628 5224 8 chr5D.!!$F5 4596
5 TraesCS5D01G023400 chr5A 11938269 11943207 4938 False 2771.000000 5854 97.401333 628 5569 3 chr5A.!!$F2 4941
6 TraesCS5D01G023400 chr5A 626966070 626971035 4965 True 1810.666667 1954 87.934667 628 5323 3 chr5A.!!$R1 4695
7 TraesCS5D01G023400 chr4A 615693779 615698770 4991 True 1375.200000 2486 92.384800 628 5569 5 chr4A.!!$R3 4941
8 TraesCS5D01G023400 chr4A 158583722 158584379 657 True 750.000000 750 87.994000 1 628 1 chr4A.!!$R1 627
9 TraesCS5D01G023400 chr5B 621841252 621846108 4856 True 1787.333333 1936 88.071000 628 5224 3 chr5B.!!$R2 4596
10 TraesCS5D01G023400 chr5B 712967753 712972737 4984 False 707.333333 1452 85.931167 629 5224 6 chr5B.!!$F2 4595
11 TraesCS5D01G023400 chr7B 43626 48431 4805 True 766.200000 1194 85.728400 628 5224 5 chr7B.!!$R4 4596
12 TraesCS5D01G023400 chr7B 103891526 103895914 4388 True 639.800000 1170 83.238000 628 4513 5 chr7B.!!$R5 3885
13 TraesCS5D01G023400 chr4D 190959426 190960054 628 False 1140.000000 1140 99.364000 1 629 1 chr4D.!!$F1 628
14 TraesCS5D01G023400 chr7D 78298671 78299298 627 False 1133.000000 1133 99.204000 1 628 1 chr7D.!!$F2 627
15 TraesCS5D01G023400 chr7D 25949045 25949681 636 False 1002.000000 1002 95.312000 1 628 1 chr7D.!!$F1 627
16 TraesCS5D01G023400 chr7D 138422150 138426549 4399 True 699.500000 1033 84.925000 628 4510 4 chr7D.!!$R2 3882
17 TraesCS5D01G023400 chr2D 631170975 631171603 628 True 1129.000000 1129 99.046000 1 629 1 chr2D.!!$R3 628
18 TraesCS5D01G023400 chr1D 19677744 19678371 627 True 1116.000000 1116 98.726000 1 628 1 chr1D.!!$R1 627
19 TraesCS5D01G023400 chr6D 468691897 468692524 627 True 1094.000000 1094 98.089000 1 628 1 chr6D.!!$R2 627
20 TraesCS5D01G023400 chr3D 4652880 4653498 618 True 1042.000000 1042 96.825000 1 630 1 chr3D.!!$R1 629
21 TraesCS5D01G023400 chr3D 595789290 595789929 639 False 1022.000000 1022 95.781000 1 628 1 chr3D.!!$F2 627
22 TraesCS5D01G023400 chr2A 607473802 607474458 656 False 817.000000 817 89.802000 1 630 1 chr2A.!!$F1 629
23 TraesCS5D01G023400 chr7A 138502717 138508027 5310 True 395.666667 747 81.757333 1849 4548 3 chr7A.!!$R1 2699
24 TraesCS5D01G023400 chr2B 787755526 787757119 1593 False 529.500000 628 83.787000 2997 4475 2 chr2B.!!$F1 1478

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
882 974 2.038295 AGGAGTTGCTGACTTCCTTCAG 59.962 50.000 0.00 0.0 45.15 3.02 F
1449 1541 1.119684 CGGTATGGGTCATCCTCACA 58.880 55.000 0.00 0.0 36.20 3.58 F
1927 2681 1.134220 TGGACGGCAAGGGATCATTAC 60.134 52.381 0.00 0.0 0.00 1.89 F
2729 3749 2.348998 GTGTGAGTGGAGCTGGGG 59.651 66.667 0.00 0.0 0.00 4.96 F
3517 7046 0.546122 TGCTGGTGAACTTGGTCACT 59.454 50.000 16.93 0.0 45.98 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1819 2190 1.970640 CAGATCCACCATGGTCGGATA 59.029 52.381 31.91 17.49 39.03 2.59 R
2736 3756 2.173356 CCTGCCAGGACATCCATTAGAA 59.827 50.000 4.15 0.00 37.67 2.10 R
3271 4317 2.279935 ACTGTATTTTTCACCGCCCA 57.720 45.000 0.00 0.00 0.00 5.36 R
4611 8409 0.037697 TGTACATCACCTCCACGCAC 60.038 55.000 0.00 0.00 0.00 5.34 R
5073 8900 0.179004 AATTGCTTCACCACCACGGA 60.179 50.000 0.00 0.00 38.63 4.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
882 974 2.038295 AGGAGTTGCTGACTTCCTTCAG 59.962 50.000 0.00 0.00 45.15 3.02
1050 1142 2.886523 CAAGTCCAAAACTCATCCTGCA 59.113 45.455 0.00 0.00 37.17 4.41
1416 1508 3.006537 TCATCTCGAAAGTTCCCGTTTCT 59.993 43.478 0.00 0.00 32.64 2.52
1449 1541 1.119684 CGGTATGGGTCATCCTCACA 58.880 55.000 0.00 0.00 36.20 3.58
1574 1847 2.548057 TCATTGCAGGTTCTTTCGTCAC 59.452 45.455 0.00 0.00 0.00 3.67
1686 1959 2.806434 TGGGGATGTTTGTGATCCTTG 58.194 47.619 0.00 0.00 39.61 3.61
1819 2190 6.293955 CCTGATTTTTAACGTGAACAGGTGAT 60.294 38.462 10.58 0.00 38.83 3.06
1884 2313 6.885247 CGTAAGTTTTTCTTAGAACCCTGTC 58.115 40.000 0.00 0.00 39.03 3.51
1927 2681 1.134220 TGGACGGCAAGGGATCATTAC 60.134 52.381 0.00 0.00 0.00 1.89
2018 2788 5.299949 ACAATGATACATCTATCGCTGCAA 58.700 37.500 0.00 0.00 32.58 4.08
2366 3310 3.141398 TCAAGCCACTTGAAGCTGTTAG 58.859 45.455 7.54 0.00 45.84 2.34
2528 3512 5.505985 GCCTACCTATCTTTCTACTCACACG 60.506 48.000 0.00 0.00 0.00 4.49
2729 3749 2.348998 GTGTGAGTGGAGCTGGGG 59.651 66.667 0.00 0.00 0.00 4.96
3271 4317 2.819552 GCCGCGGCGATTGTAATGT 61.820 57.895 37.24 0.00 0.00 2.71
3281 4327 2.088423 GATTGTAATGTGGGCGGTGAA 58.912 47.619 0.00 0.00 0.00 3.18
3517 7046 0.546122 TGCTGGTGAACTTGGTCACT 59.454 50.000 16.93 0.00 45.98 3.41
3604 7218 6.549952 CAGCAAGATTTTACAGGCTTAGAAG 58.450 40.000 0.00 0.00 0.00 2.85
3788 7430 8.875803 ACATAAATTTTGCTGACATTTATGCTG 58.124 29.630 20.19 9.08 46.09 4.41
4208 7887 5.622233 GCAGAAGGGGACAAAAATGTATGAC 60.622 44.000 0.00 0.00 0.00 3.06
4560 8356 5.774690 TGTCTAGATGAAAGGGCACAAATTT 59.225 36.000 0.00 0.00 0.00 1.82
4611 8409 4.661402 GCAAATTTTTGATTCGTGCAGACG 60.661 41.667 7.21 0.00 42.66 4.18
4839 8637 2.248248 CTCCCCCTTTGGAACCTTTTC 58.752 52.381 0.00 0.00 35.39 2.29
4907 8718 5.229469 CACGTGTCGATTAACTAACTGGATC 59.771 44.000 7.58 0.00 0.00 3.36
4952 8776 2.005451 GTTGGTTGTTGTTGCATGCAA 58.995 42.857 28.80 28.80 0.00 4.08
5058 8882 1.116536 TAACACCAGCCCTGTGTCGA 61.117 55.000 4.24 0.00 0.00 4.20
5073 8900 3.461773 CGATCACCGGTGGGAGCT 61.462 66.667 33.40 13.73 36.97 4.09
5344 9202 0.764890 TGTAGTGATATGCTGGCCCC 59.235 55.000 0.00 0.00 0.00 5.80
5354 9212 0.178921 TGCTGGCCCCATTTTTACCA 60.179 50.000 0.00 0.00 0.00 3.25
5362 9220 7.691542 GCTGGCCCCATTTTTACCATTATTATT 60.692 37.037 0.00 0.00 0.00 1.40
5363 9221 7.512992 TGGCCCCATTTTTACCATTATTATTG 58.487 34.615 0.00 0.00 0.00 1.90
5364 9222 7.127955 TGGCCCCATTTTTACCATTATTATTGT 59.872 33.333 0.00 0.00 0.00 2.71
5365 9223 7.996066 GGCCCCATTTTTACCATTATTATTGTT 59.004 33.333 0.00 0.00 0.00 2.83
5483 9342 7.937649 ACTGTGACCCTTATGTAAAAACTTTC 58.062 34.615 0.00 0.00 0.00 2.62
5516 9375 4.580580 GGAAGCGGATTTATCATTGGTCTT 59.419 41.667 0.00 0.00 0.00 3.01
5552 9411 6.283694 TCACGGGATTCAGAGATTTATTCAG 58.716 40.000 0.00 0.00 0.00 3.02
5569 9428 7.552050 TTATTCAGGTGGGTCAATTCAATTT 57.448 32.000 0.00 0.00 0.00 1.82
5570 9429 4.870123 TCAGGTGGGTCAATTCAATTTG 57.130 40.909 0.00 0.00 0.00 2.32
5571 9430 3.006752 TCAGGTGGGTCAATTCAATTTGC 59.993 43.478 0.00 0.00 0.00 3.68
5572 9431 2.302733 AGGTGGGTCAATTCAATTTGCC 59.697 45.455 0.00 0.00 0.00 4.52
5573 9432 2.336667 GTGGGTCAATTCAATTTGCCG 58.663 47.619 0.00 0.00 0.00 5.69
5574 9433 1.337635 TGGGTCAATTCAATTTGCCGC 60.338 47.619 0.00 0.00 0.00 6.53
5575 9434 1.358877 GGTCAATTCAATTTGCCGCC 58.641 50.000 0.00 0.00 0.00 6.13
5576 9435 1.337635 GGTCAATTCAATTTGCCGCCA 60.338 47.619 0.00 0.00 0.00 5.69
5577 9436 2.411904 GTCAATTCAATTTGCCGCCAA 58.588 42.857 0.00 0.00 0.00 4.52
5578 9437 2.157474 GTCAATTCAATTTGCCGCCAAC 59.843 45.455 0.00 0.00 0.00 3.77
5579 9438 2.036992 TCAATTCAATTTGCCGCCAACT 59.963 40.909 0.00 0.00 0.00 3.16
5580 9439 3.256879 TCAATTCAATTTGCCGCCAACTA 59.743 39.130 0.00 0.00 0.00 2.24
5581 9440 3.508744 ATTCAATTTGCCGCCAACTAG 57.491 42.857 0.00 0.00 0.00 2.57
5582 9441 1.173043 TCAATTTGCCGCCAACTAGG 58.827 50.000 0.00 0.00 41.84 3.02
5583 9442 1.173043 CAATTTGCCGCCAACTAGGA 58.827 50.000 0.00 0.00 41.22 2.94
5584 9443 1.543802 CAATTTGCCGCCAACTAGGAA 59.456 47.619 0.00 0.00 41.22 3.36
5585 9444 2.143876 ATTTGCCGCCAACTAGGAAT 57.856 45.000 0.00 0.00 41.22 3.01
5586 9445 1.173043 TTTGCCGCCAACTAGGAATG 58.827 50.000 0.00 0.00 41.22 2.67
5587 9446 0.326595 TTGCCGCCAACTAGGAATGA 59.673 50.000 0.00 0.00 41.22 2.57
5588 9447 0.326595 TGCCGCCAACTAGGAATGAA 59.673 50.000 0.00 0.00 41.22 2.57
5589 9448 1.271652 TGCCGCCAACTAGGAATGAAA 60.272 47.619 0.00 0.00 41.22 2.69
5590 9449 2.024414 GCCGCCAACTAGGAATGAAAT 58.976 47.619 0.00 0.00 41.22 2.17
5591 9450 2.223572 GCCGCCAACTAGGAATGAAATG 60.224 50.000 0.00 0.00 41.22 2.32
5592 9451 3.016736 CCGCCAACTAGGAATGAAATGT 58.983 45.455 0.00 0.00 41.22 2.71
5593 9452 4.196193 CCGCCAACTAGGAATGAAATGTA 58.804 43.478 0.00 0.00 41.22 2.29
5594 9453 4.035208 CCGCCAACTAGGAATGAAATGTAC 59.965 45.833 0.00 0.00 41.22 2.90
5595 9454 4.876107 CGCCAACTAGGAATGAAATGTACT 59.124 41.667 0.00 0.00 41.22 2.73
5596 9455 5.006746 CGCCAACTAGGAATGAAATGTACTC 59.993 44.000 0.00 0.00 41.22 2.59
5597 9456 5.297029 GCCAACTAGGAATGAAATGTACTCC 59.703 44.000 0.00 0.00 41.22 3.85
5598 9457 5.823045 CCAACTAGGAATGAAATGTACTCCC 59.177 44.000 0.00 0.00 41.22 4.30
5599 9458 6.353082 CCAACTAGGAATGAAATGTACTCCCT 60.353 42.308 0.00 0.00 41.22 4.20
5600 9459 6.487299 ACTAGGAATGAAATGTACTCCCTC 57.513 41.667 0.00 0.00 0.00 4.30
5601 9460 4.779993 AGGAATGAAATGTACTCCCTCC 57.220 45.455 0.00 0.00 0.00 4.30
5602 9461 3.134804 AGGAATGAAATGTACTCCCTCCG 59.865 47.826 0.00 0.00 0.00 4.63
5603 9462 3.118371 GGAATGAAATGTACTCCCTCCGT 60.118 47.826 0.00 0.00 0.00 4.69
5604 9463 4.514401 GAATGAAATGTACTCCCTCCGTT 58.486 43.478 0.00 0.00 0.00 4.44
5605 9464 3.604875 TGAAATGTACTCCCTCCGTTC 57.395 47.619 0.00 0.00 0.00 3.95
5606 9465 2.235402 TGAAATGTACTCCCTCCGTTCC 59.765 50.000 0.00 0.00 0.00 3.62
5607 9466 2.249309 AATGTACTCCCTCCGTTCCT 57.751 50.000 0.00 0.00 0.00 3.36
5608 9467 3.393426 AATGTACTCCCTCCGTTCCTA 57.607 47.619 0.00 0.00 0.00 2.94
5609 9468 2.905415 TGTACTCCCTCCGTTCCTAA 57.095 50.000 0.00 0.00 0.00 2.69
5610 9469 3.173953 TGTACTCCCTCCGTTCCTAAA 57.826 47.619 0.00 0.00 0.00 1.85
5611 9470 3.716431 TGTACTCCCTCCGTTCCTAAAT 58.284 45.455 0.00 0.00 0.00 1.40
5612 9471 4.870636 TGTACTCCCTCCGTTCCTAAATA 58.129 43.478 0.00 0.00 0.00 1.40
5613 9472 5.461327 TGTACTCCCTCCGTTCCTAAATAT 58.539 41.667 0.00 0.00 0.00 1.28
5614 9473 6.613699 TGTACTCCCTCCGTTCCTAAATATA 58.386 40.000 0.00 0.00 0.00 0.86
5615 9474 7.068702 TGTACTCCCTCCGTTCCTAAATATAA 58.931 38.462 0.00 0.00 0.00 0.98
5616 9475 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
5617 9476 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
5618 9477 6.267242 ACTCCCTCCGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
5619 9478 6.379579 TCCCTCCGTTCCTAAATATAAGTCT 58.620 40.000 0.00 0.00 0.00 3.24
5620 9479 6.842807 TCCCTCCGTTCCTAAATATAAGTCTT 59.157 38.462 0.00 0.00 0.00 3.01
5621 9480 7.346436 TCCCTCCGTTCCTAAATATAAGTCTTT 59.654 37.037 0.00 0.00 0.00 2.52
5622 9481 7.991460 CCCTCCGTTCCTAAATATAAGTCTTTT 59.009 37.037 0.00 0.00 0.00 2.27
5623 9482 9.392259 CCTCCGTTCCTAAATATAAGTCTTTTT 57.608 33.333 0.00 0.00 0.00 1.94
5640 9499 9.847224 AAGTCTTTTTAGAGATTCCACTACAAA 57.153 29.630 0.00 0.00 0.00 2.83
5641 9500 9.274206 AGTCTTTTTAGAGATTCCACTACAAAC 57.726 33.333 0.00 0.00 0.00 2.93
5642 9501 9.052759 GTCTTTTTAGAGATTCCACTACAAACA 57.947 33.333 0.00 0.00 0.00 2.83
5643 9502 9.621629 TCTTTTTAGAGATTCCACTACAAACAA 57.378 29.630 0.00 0.00 0.00 2.83
5644 9503 9.665264 CTTTTTAGAGATTCCACTACAAACAAC 57.335 33.333 0.00 0.00 0.00 3.32
5645 9504 8.740123 TTTTAGAGATTCCACTACAAACAACA 57.260 30.769 0.00 0.00 0.00 3.33
5646 9505 8.918202 TTTAGAGATTCCACTACAAACAACAT 57.082 30.769 0.00 0.00 0.00 2.71
5648 9507 7.907214 AGAGATTCCACTACAAACAACATAC 57.093 36.000 0.00 0.00 0.00 2.39
5649 9508 6.590292 AGAGATTCCACTACAAACAACATACG 59.410 38.462 0.00 0.00 0.00 3.06
5650 9509 5.642063 AGATTCCACTACAAACAACATACGG 59.358 40.000 0.00 0.00 0.00 4.02
5651 9510 4.603989 TCCACTACAAACAACATACGGA 57.396 40.909 0.00 0.00 0.00 4.69
5652 9511 5.155278 TCCACTACAAACAACATACGGAT 57.845 39.130 0.00 0.00 0.00 4.18
5653 9512 4.932799 TCCACTACAAACAACATACGGATG 59.067 41.667 5.94 5.94 39.16 3.51
5655 9514 5.870433 CCACTACAAACAACATACGGATGTA 59.130 40.000 15.10 0.00 45.93 2.29
5656 9515 6.537301 CCACTACAAACAACATACGGATGTAT 59.463 38.462 15.10 2.23 45.93 2.29
5657 9516 7.707464 CCACTACAAACAACATACGGATGTATA 59.293 37.037 15.10 0.00 45.93 1.47
5658 9517 9.256477 CACTACAAACAACATACGGATGTATAT 57.744 33.333 15.10 0.00 45.93 0.86
5694 9553 5.078411 AGTGTAGATTCACTCATTTCGCT 57.922 39.130 0.00 0.00 44.07 4.93
5695 9554 5.482908 AGTGTAGATTCACTCATTTCGCTT 58.517 37.500 0.00 0.00 44.07 4.68
5696 9555 5.578727 AGTGTAGATTCACTCATTTCGCTTC 59.421 40.000 0.00 0.00 44.07 3.86
5697 9556 4.562789 TGTAGATTCACTCATTTCGCTTCG 59.437 41.667 0.00 0.00 0.00 3.79
5698 9557 3.589988 AGATTCACTCATTTCGCTTCGT 58.410 40.909 0.00 0.00 0.00 3.85
5699 9558 4.744570 AGATTCACTCATTTCGCTTCGTA 58.255 39.130 0.00 0.00 0.00 3.43
5700 9559 5.352284 AGATTCACTCATTTCGCTTCGTAT 58.648 37.500 0.00 0.00 0.00 3.06
5701 9560 4.840401 TTCACTCATTTCGCTTCGTATG 57.160 40.909 0.00 0.00 0.00 2.39
5702 9561 3.845178 TCACTCATTTCGCTTCGTATGT 58.155 40.909 0.00 0.00 0.00 2.29
5703 9562 4.989044 TCACTCATTTCGCTTCGTATGTA 58.011 39.130 0.00 0.00 0.00 2.29
5704 9563 5.034797 TCACTCATTTCGCTTCGTATGTAG 58.965 41.667 0.00 0.00 0.00 2.74
5705 9564 4.798907 CACTCATTTCGCTTCGTATGTAGT 59.201 41.667 0.00 0.00 0.00 2.73
5706 9565 5.035443 ACTCATTTCGCTTCGTATGTAGTC 58.965 41.667 0.00 0.00 0.00 2.59
5707 9566 4.357142 TCATTTCGCTTCGTATGTAGTCC 58.643 43.478 0.00 0.00 0.00 3.85
5708 9567 3.853831 TTTCGCTTCGTATGTAGTCCA 57.146 42.857 0.00 0.00 0.00 4.02
5709 9568 4.380841 TTTCGCTTCGTATGTAGTCCAT 57.619 40.909 0.00 0.00 37.58 3.41
5710 9569 5.503662 TTTCGCTTCGTATGTAGTCCATA 57.496 39.130 0.00 0.00 34.86 2.74
5711 9570 4.744136 TCGCTTCGTATGTAGTCCATAG 57.256 45.455 0.00 0.00 36.71 2.23
5712 9571 4.132336 TCGCTTCGTATGTAGTCCATAGT 58.868 43.478 0.00 0.00 36.71 2.12
5713 9572 4.024302 TCGCTTCGTATGTAGTCCATAGTG 60.024 45.833 0.00 0.00 36.71 2.74
5714 9573 4.024302 CGCTTCGTATGTAGTCCATAGTGA 60.024 45.833 0.00 0.00 36.71 3.41
5715 9574 5.505159 CGCTTCGTATGTAGTCCATAGTGAA 60.505 44.000 0.00 0.00 36.71 3.18
5716 9575 6.270815 GCTTCGTATGTAGTCCATAGTGAAA 58.729 40.000 0.00 0.00 36.71 2.69
5717 9576 6.924060 GCTTCGTATGTAGTCCATAGTGAAAT 59.076 38.462 0.00 0.00 36.71 2.17
5718 9577 7.115095 GCTTCGTATGTAGTCCATAGTGAAATC 59.885 40.741 0.00 0.00 36.71 2.17
5719 9578 7.818997 TCGTATGTAGTCCATAGTGAAATCT 57.181 36.000 0.00 0.00 36.71 2.40
5720 9579 7.872881 TCGTATGTAGTCCATAGTGAAATCTC 58.127 38.462 0.00 0.00 36.71 2.75
5721 9580 7.720074 TCGTATGTAGTCCATAGTGAAATCTCT 59.280 37.037 0.00 0.00 36.71 3.10
5722 9581 9.000486 CGTATGTAGTCCATAGTGAAATCTCTA 58.000 37.037 0.00 0.00 36.71 2.43
5726 9585 8.696374 TGTAGTCCATAGTGAAATCTCTAAAGG 58.304 37.037 0.00 3.29 0.00 3.11
5727 9586 7.130681 AGTCCATAGTGAAATCTCTAAAGGG 57.869 40.000 11.30 7.58 0.00 3.95
5728 9587 6.903534 AGTCCATAGTGAAATCTCTAAAGGGA 59.096 38.462 11.30 9.05 0.00 4.20
5729 9588 6.987404 GTCCATAGTGAAATCTCTAAAGGGAC 59.013 42.308 16.61 16.61 36.20 4.46
5747 9606 6.739331 AGGGACTTATATTCAGGAACAGAG 57.261 41.667 0.00 0.00 27.25 3.35
5748 9607 5.604650 AGGGACTTATATTCAGGAACAGAGG 59.395 44.000 0.00 0.00 27.25 3.69
5749 9608 5.221742 GGGACTTATATTCAGGAACAGAGGG 60.222 48.000 0.00 0.00 0.00 4.30
5750 9609 5.602978 GGACTTATATTCAGGAACAGAGGGA 59.397 44.000 0.00 0.00 0.00 4.20
5751 9610 6.239458 GGACTTATATTCAGGAACAGAGGGAG 60.239 46.154 0.00 0.00 0.00 4.30
5752 9611 6.206042 ACTTATATTCAGGAACAGAGGGAGT 58.794 40.000 0.00 0.00 0.00 3.85
5753 9612 7.363031 ACTTATATTCAGGAACAGAGGGAGTA 58.637 38.462 0.00 0.00 0.00 2.59
5754 9613 8.013667 ACTTATATTCAGGAACAGAGGGAGTAT 58.986 37.037 0.00 0.00 0.00 2.12
5755 9614 9.535170 CTTATATTCAGGAACAGAGGGAGTATA 57.465 37.037 0.00 0.00 0.00 1.47
5756 9615 9.892444 TTATATTCAGGAACAGAGGGAGTATAA 57.108 33.333 0.00 0.00 0.00 0.98
5757 9616 8.980832 ATATTCAGGAACAGAGGGAGTATAAT 57.019 34.615 0.00 0.00 0.00 1.28
5758 9617 6.732896 TTCAGGAACAGAGGGAGTATAATC 57.267 41.667 0.00 0.00 0.00 1.75
5759 9618 4.827835 TCAGGAACAGAGGGAGTATAATCG 59.172 45.833 0.00 0.00 0.00 3.34
5760 9619 4.827835 CAGGAACAGAGGGAGTATAATCGA 59.172 45.833 0.00 0.00 0.00 3.59
5761 9620 5.478679 CAGGAACAGAGGGAGTATAATCGAT 59.521 44.000 0.00 0.00 0.00 3.59
5762 9621 5.712917 AGGAACAGAGGGAGTATAATCGATC 59.287 44.000 0.00 0.00 0.00 3.69
5763 9622 5.477291 GGAACAGAGGGAGTATAATCGATCA 59.523 44.000 0.00 0.00 0.00 2.92
5764 9623 6.015350 GGAACAGAGGGAGTATAATCGATCAA 60.015 42.308 0.00 0.00 0.00 2.57
5765 9624 6.582677 ACAGAGGGAGTATAATCGATCAAG 57.417 41.667 0.00 2.11 0.00 3.02
5766 9625 5.478679 ACAGAGGGAGTATAATCGATCAAGG 59.521 44.000 0.00 0.01 0.00 3.61
5767 9626 5.020132 AGAGGGAGTATAATCGATCAAGGG 58.980 45.833 0.00 0.00 0.00 3.95
5768 9627 5.011982 AGGGAGTATAATCGATCAAGGGA 57.988 43.478 0.00 0.00 0.00 4.20
5769 9628 5.403512 AGGGAGTATAATCGATCAAGGGAA 58.596 41.667 0.00 0.00 0.00 3.97
5770 9629 5.246429 AGGGAGTATAATCGATCAAGGGAAC 59.754 44.000 0.00 0.00 0.00 3.62
5786 9645 2.017049 GGAACCATTCAATCACCTCGG 58.983 52.381 0.00 0.00 0.00 4.63
5787 9646 2.618045 GGAACCATTCAATCACCTCGGT 60.618 50.000 0.00 0.00 0.00 4.69
5788 9647 2.403252 ACCATTCAATCACCTCGGTC 57.597 50.000 0.00 0.00 0.00 4.79
5789 9648 1.909302 ACCATTCAATCACCTCGGTCT 59.091 47.619 0.00 0.00 0.00 3.85
5790 9649 2.305927 ACCATTCAATCACCTCGGTCTT 59.694 45.455 0.00 0.00 0.00 3.01
5791 9650 3.244911 ACCATTCAATCACCTCGGTCTTT 60.245 43.478 0.00 0.00 0.00 2.52
5792 9651 3.127548 CCATTCAATCACCTCGGTCTTTG 59.872 47.826 0.00 0.00 0.00 2.77
5793 9652 1.808411 TCAATCACCTCGGTCTTTGC 58.192 50.000 3.71 0.00 0.00 3.68
5794 9653 1.347707 TCAATCACCTCGGTCTTTGCT 59.652 47.619 3.71 0.00 0.00 3.91
5795 9654 2.565391 TCAATCACCTCGGTCTTTGCTA 59.435 45.455 3.71 0.00 0.00 3.49
5796 9655 2.673368 CAATCACCTCGGTCTTTGCTAC 59.327 50.000 0.00 0.00 0.00 3.58
5797 9656 1.334160 TCACCTCGGTCTTTGCTACA 58.666 50.000 0.00 0.00 0.00 2.74
5798 9657 1.689813 TCACCTCGGTCTTTGCTACAA 59.310 47.619 0.00 0.00 0.00 2.41
5799 9658 1.798813 CACCTCGGTCTTTGCTACAAC 59.201 52.381 0.00 0.00 0.00 3.32
5800 9659 1.414919 ACCTCGGTCTTTGCTACAACA 59.585 47.619 0.00 0.00 0.00 3.33
5801 9660 2.158871 ACCTCGGTCTTTGCTACAACAA 60.159 45.455 0.00 0.00 0.00 2.83
5802 9661 2.480419 CCTCGGTCTTTGCTACAACAAG 59.520 50.000 0.00 0.00 0.00 3.16
5803 9662 3.390135 CTCGGTCTTTGCTACAACAAGA 58.610 45.455 0.00 0.00 0.00 3.02
5804 9663 3.799366 TCGGTCTTTGCTACAACAAGAA 58.201 40.909 0.00 0.00 0.00 2.52
5805 9664 3.807622 TCGGTCTTTGCTACAACAAGAAG 59.192 43.478 0.00 0.00 0.00 2.85
5806 9665 3.807622 CGGTCTTTGCTACAACAAGAAGA 59.192 43.478 0.00 0.00 0.00 2.87
5807 9666 4.084328 CGGTCTTTGCTACAACAAGAAGAG 60.084 45.833 0.00 0.00 0.00 2.85
5808 9667 4.816925 GGTCTTTGCTACAACAAGAAGAGT 59.183 41.667 0.00 0.00 0.00 3.24
5809 9668 5.277538 GGTCTTTGCTACAACAAGAAGAGTG 60.278 44.000 0.00 0.00 0.00 3.51
5810 9669 4.816385 TCTTTGCTACAACAAGAAGAGTGG 59.184 41.667 0.00 0.00 0.00 4.00
5811 9670 3.838244 TGCTACAACAAGAAGAGTGGT 57.162 42.857 0.00 0.00 0.00 4.16
5812 9671 4.150897 TGCTACAACAAGAAGAGTGGTT 57.849 40.909 0.00 0.00 0.00 3.67
5813 9672 4.127171 TGCTACAACAAGAAGAGTGGTTC 58.873 43.478 0.00 0.00 0.00 3.62
5814 9673 4.141711 TGCTACAACAAGAAGAGTGGTTCT 60.142 41.667 0.00 0.00 38.48 3.01
5815 9674 5.069914 TGCTACAACAAGAAGAGTGGTTCTA 59.930 40.000 0.00 0.00 35.65 2.10
5816 9675 5.405873 GCTACAACAAGAAGAGTGGTTCTAC 59.594 44.000 0.00 0.00 35.65 2.59
5817 9676 4.369182 ACAACAAGAAGAGTGGTTCTACG 58.631 43.478 0.00 0.00 35.65 3.51
5818 9677 4.142004 ACAACAAGAAGAGTGGTTCTACGT 60.142 41.667 0.00 0.00 35.65 3.57
5819 9678 5.068198 ACAACAAGAAGAGTGGTTCTACGTA 59.932 40.000 0.00 0.00 35.65 3.57
5820 9679 5.118642 ACAAGAAGAGTGGTTCTACGTAC 57.881 43.478 0.00 0.00 35.65 3.67
5821 9680 4.581824 ACAAGAAGAGTGGTTCTACGTACA 59.418 41.667 0.00 0.00 35.65 2.90
5822 9681 5.243283 ACAAGAAGAGTGGTTCTACGTACAT 59.757 40.000 0.00 0.00 35.65 2.29
5823 9682 5.564048 AGAAGAGTGGTTCTACGTACATC 57.436 43.478 0.00 0.00 34.90 3.06
5824 9683 4.398673 AGAAGAGTGGTTCTACGTACATCC 59.601 45.833 0.00 0.00 34.90 3.51
5825 9684 3.022406 AGAGTGGTTCTACGTACATCCC 58.978 50.000 0.00 0.00 33.23 3.85
5826 9685 1.747355 AGTGGTTCTACGTACATCCCG 59.253 52.381 0.00 0.00 0.00 5.14
5827 9686 1.105457 TGGTTCTACGTACATCCCGG 58.895 55.000 0.00 0.00 0.00 5.73
5828 9687 1.340893 TGGTTCTACGTACATCCCGGA 60.341 52.381 0.73 0.00 0.00 5.14
5829 9688 1.959282 GGTTCTACGTACATCCCGGAT 59.041 52.381 0.73 0.00 0.00 4.18
5830 9689 2.288030 GGTTCTACGTACATCCCGGATG 60.288 54.545 23.64 23.64 44.71 3.51
5831 9690 2.620115 GTTCTACGTACATCCCGGATGA 59.380 50.000 30.51 13.57 42.09 2.92
5832 9691 2.224606 TCTACGTACATCCCGGATGAC 58.775 52.381 30.51 21.57 42.09 3.06
5833 9692 1.951602 CTACGTACATCCCGGATGACA 59.048 52.381 30.51 16.30 42.09 3.58
5834 9693 1.410004 ACGTACATCCCGGATGACAT 58.590 50.000 30.51 13.35 42.09 3.06
5835 9694 1.068588 ACGTACATCCCGGATGACATG 59.931 52.381 30.51 22.85 42.09 3.21
5836 9695 1.339929 CGTACATCCCGGATGACATGA 59.660 52.381 30.51 9.76 42.09 3.07
5837 9696 2.755650 GTACATCCCGGATGACATGAC 58.244 52.381 30.51 16.34 42.09 3.06
5838 9697 1.500474 ACATCCCGGATGACATGACT 58.500 50.000 30.51 6.52 42.09 3.41
5839 9698 2.677914 ACATCCCGGATGACATGACTA 58.322 47.619 30.51 0.00 42.09 2.59
5840 9699 2.365617 ACATCCCGGATGACATGACTAC 59.634 50.000 30.51 0.00 42.09 2.73
5841 9700 2.153034 TCCCGGATGACATGACTACA 57.847 50.000 0.73 0.00 0.00 2.74
5842 9701 1.754803 TCCCGGATGACATGACTACAC 59.245 52.381 0.73 0.00 0.00 2.90
5843 9702 1.757118 CCCGGATGACATGACTACACT 59.243 52.381 0.73 0.00 0.00 3.55
5844 9703 2.223829 CCCGGATGACATGACTACACTC 60.224 54.545 0.73 0.00 0.00 3.51
5845 9704 2.690497 CCGGATGACATGACTACACTCT 59.310 50.000 0.00 0.00 0.00 3.24
5846 9705 3.243234 CCGGATGACATGACTACACTCTC 60.243 52.174 0.00 0.00 0.00 3.20
5847 9706 3.378427 CGGATGACATGACTACACTCTCA 59.622 47.826 0.00 0.00 0.00 3.27
5848 9707 4.677584 GGATGACATGACTACACTCTCAC 58.322 47.826 0.00 0.00 0.00 3.51
5849 9708 4.158579 GGATGACATGACTACACTCTCACA 59.841 45.833 0.00 0.00 0.00 3.58
5850 9709 5.336770 GGATGACATGACTACACTCTCACAA 60.337 44.000 0.00 0.00 0.00 3.33
5851 9710 5.529581 TGACATGACTACACTCTCACAAA 57.470 39.130 0.00 0.00 0.00 2.83
5852 9711 5.532557 TGACATGACTACACTCTCACAAAG 58.467 41.667 0.00 0.00 0.00 2.77
5853 9712 5.301805 TGACATGACTACACTCTCACAAAGA 59.698 40.000 0.00 0.00 0.00 2.52
5854 9713 6.015095 TGACATGACTACACTCTCACAAAGAT 60.015 38.462 0.00 0.00 32.19 2.40
5855 9714 7.176690 TGACATGACTACACTCTCACAAAGATA 59.823 37.037 0.00 0.00 32.19 1.98
5856 9715 7.542890 ACATGACTACACTCTCACAAAGATAG 58.457 38.462 0.00 0.00 32.19 2.08
5857 9716 6.516739 TGACTACACTCTCACAAAGATAGG 57.483 41.667 0.00 0.00 32.19 2.57
5858 9717 6.246163 TGACTACACTCTCACAAAGATAGGA 58.754 40.000 0.00 0.00 32.19 2.94
5859 9718 6.892456 TGACTACACTCTCACAAAGATAGGAT 59.108 38.462 0.00 0.00 32.19 3.24
5860 9719 7.397476 TGACTACACTCTCACAAAGATAGGATT 59.603 37.037 0.00 0.00 32.19 3.01
5861 9720 8.824756 ACTACACTCTCACAAAGATAGGATTA 57.175 34.615 0.00 0.00 32.19 1.75
5862 9721 8.688151 ACTACACTCTCACAAAGATAGGATTAC 58.312 37.037 0.00 0.00 32.19 1.89
5863 9722 6.565234 ACACTCTCACAAAGATAGGATTACG 58.435 40.000 0.00 0.00 32.19 3.18
5864 9723 6.377429 ACACTCTCACAAAGATAGGATTACGA 59.623 38.462 0.00 0.00 32.19 3.43
5865 9724 7.068839 ACACTCTCACAAAGATAGGATTACGAT 59.931 37.037 0.00 0.00 32.19 3.73
5866 9725 7.380870 CACTCTCACAAAGATAGGATTACGATG 59.619 40.741 0.00 0.00 32.19 3.84
5867 9726 7.285629 ACTCTCACAAAGATAGGATTACGATGA 59.714 37.037 0.00 0.00 32.19 2.92
5868 9727 8.183104 TCTCACAAAGATAGGATTACGATGAT 57.817 34.615 0.00 0.00 0.00 2.45
5869 9728 9.297037 TCTCACAAAGATAGGATTACGATGATA 57.703 33.333 0.00 0.00 0.00 2.15
5870 9729 9.914131 CTCACAAAGATAGGATTACGATGATAA 57.086 33.333 0.00 0.00 0.00 1.75
5875 9734 9.712305 AAAGATAGGATTACGATGATAAACTGG 57.288 33.333 0.00 0.00 0.00 4.00
5876 9735 7.841956 AGATAGGATTACGATGATAAACTGGG 58.158 38.462 0.00 0.00 0.00 4.45
5877 9736 7.674348 AGATAGGATTACGATGATAAACTGGGA 59.326 37.037 0.00 0.00 0.00 4.37
5878 9737 5.855045 AGGATTACGATGATAAACTGGGAC 58.145 41.667 0.00 0.00 0.00 4.46
5879 9738 5.365605 AGGATTACGATGATAAACTGGGACA 59.634 40.000 0.00 0.00 0.00 4.02
5880 9739 6.043243 AGGATTACGATGATAAACTGGGACAT 59.957 38.462 0.00 0.00 38.20 3.06
5881 9740 6.710744 GGATTACGATGATAAACTGGGACATT 59.289 38.462 0.00 0.00 38.20 2.71
5882 9741 7.228706 GGATTACGATGATAAACTGGGACATTT 59.771 37.037 0.00 0.00 38.20 2.32
5883 9742 5.818136 ACGATGATAAACTGGGACATTTG 57.182 39.130 0.00 0.00 38.20 2.32
5884 9743 4.640201 ACGATGATAAACTGGGACATTTGG 59.360 41.667 0.00 0.00 38.20 3.28
5885 9744 4.640201 CGATGATAAACTGGGACATTTGGT 59.360 41.667 0.00 0.00 38.20 3.67
5886 9745 5.820423 CGATGATAAACTGGGACATTTGGTA 59.180 40.000 0.00 0.00 38.20 3.25
5887 9746 6.017934 CGATGATAAACTGGGACATTTGGTAG 60.018 42.308 0.00 0.00 38.20 3.18
5888 9747 4.947388 TGATAAACTGGGACATTTGGTAGC 59.053 41.667 0.00 0.00 38.20 3.58
5889 9748 2.969821 AACTGGGACATTTGGTAGCA 57.030 45.000 0.00 0.00 38.20 3.49
5890 9749 3.456380 AACTGGGACATTTGGTAGCAT 57.544 42.857 0.00 0.00 38.20 3.79
5891 9750 2.726821 ACTGGGACATTTGGTAGCATG 58.273 47.619 0.00 0.00 38.20 4.06
5892 9751 2.041620 ACTGGGACATTTGGTAGCATGT 59.958 45.455 0.90 0.90 38.20 3.21
5893 9752 3.265737 ACTGGGACATTTGGTAGCATGTA 59.734 43.478 1.31 0.00 38.20 2.29
5894 9753 4.079787 ACTGGGACATTTGGTAGCATGTAT 60.080 41.667 1.31 0.00 38.20 2.29
5895 9754 4.206375 TGGGACATTTGGTAGCATGTATG 58.794 43.478 1.31 6.04 33.62 2.39
5896 9755 3.569701 GGGACATTTGGTAGCATGTATGG 59.430 47.826 13.38 0.00 33.62 2.74
5897 9756 4.460263 GGACATTTGGTAGCATGTATGGA 58.540 43.478 13.38 0.00 33.62 3.41
5898 9757 4.275936 GGACATTTGGTAGCATGTATGGAC 59.724 45.833 13.38 8.70 33.62 4.02
5899 9758 4.207165 ACATTTGGTAGCATGTATGGACC 58.793 43.478 13.38 0.00 31.60 4.46
5900 9759 4.079787 ACATTTGGTAGCATGTATGGACCT 60.080 41.667 13.38 0.00 31.60 3.85
5901 9760 5.131977 ACATTTGGTAGCATGTATGGACCTA 59.868 40.000 13.38 0.00 31.60 3.08
5902 9761 5.702065 TTTGGTAGCATGTATGGACCTAA 57.298 39.130 0.00 0.00 0.00 2.69
5903 9762 4.682778 TGGTAGCATGTATGGACCTAAC 57.317 45.455 0.00 0.00 0.00 2.34
5904 9763 3.389983 TGGTAGCATGTATGGACCTAACC 59.610 47.826 0.00 0.00 0.00 2.85
5905 9764 3.646637 GGTAGCATGTATGGACCTAACCT 59.353 47.826 0.00 0.00 0.00 3.50
5906 9765 4.836736 GGTAGCATGTATGGACCTAACCTA 59.163 45.833 0.00 0.00 0.00 3.08
5907 9766 5.047235 GGTAGCATGTATGGACCTAACCTAG 60.047 48.000 0.00 0.00 0.00 3.02
5908 9767 4.557705 AGCATGTATGGACCTAACCTAGT 58.442 43.478 0.00 0.00 0.00 2.57
5909 9768 4.969359 AGCATGTATGGACCTAACCTAGTT 59.031 41.667 0.00 0.00 0.00 2.24
5910 9769 5.057149 GCATGTATGGACCTAACCTAGTTG 58.943 45.833 0.00 0.00 0.00 3.16
5911 9770 5.396436 GCATGTATGGACCTAACCTAGTTGT 60.396 44.000 0.00 0.00 0.00 3.32
5912 9771 6.650120 CATGTATGGACCTAACCTAGTTGTT 58.350 40.000 0.00 0.00 0.00 2.83
5913 9772 6.290294 TGTATGGACCTAACCTAGTTGTTC 57.710 41.667 0.00 0.00 0.00 3.18
5914 9773 6.021030 TGTATGGACCTAACCTAGTTGTTCT 58.979 40.000 0.00 0.00 0.00 3.01
5915 9774 5.678955 ATGGACCTAACCTAGTTGTTCTC 57.321 43.478 0.00 0.00 0.00 2.87
5916 9775 3.836562 TGGACCTAACCTAGTTGTTCTCC 59.163 47.826 0.00 0.00 0.00 3.71
5917 9776 4.095211 GGACCTAACCTAGTTGTTCTCCT 58.905 47.826 0.00 0.00 0.00 3.69
5918 9777 4.160065 GGACCTAACCTAGTTGTTCTCCTC 59.840 50.000 0.00 0.00 0.00 3.71
5919 9778 5.013258 ACCTAACCTAGTTGTTCTCCTCT 57.987 43.478 0.00 0.00 0.00 3.69
5920 9779 5.018149 ACCTAACCTAGTTGTTCTCCTCTC 58.982 45.833 0.00 0.00 0.00 3.20
5921 9780 5.017490 CCTAACCTAGTTGTTCTCCTCTCA 58.983 45.833 0.00 0.00 0.00 3.27
5922 9781 5.659079 CCTAACCTAGTTGTTCTCCTCTCAT 59.341 44.000 0.00 0.00 0.00 2.90
5923 9782 6.834451 CCTAACCTAGTTGTTCTCCTCTCATA 59.166 42.308 0.00 0.00 0.00 2.15
5924 9783 6.532988 AACCTAGTTGTTCTCCTCTCATAC 57.467 41.667 0.00 0.00 0.00 2.39
5925 9784 5.580998 ACCTAGTTGTTCTCCTCTCATACA 58.419 41.667 0.00 0.00 0.00 2.29
5926 9785 6.198639 ACCTAGTTGTTCTCCTCTCATACAT 58.801 40.000 0.00 0.00 0.00 2.29
5927 9786 6.097554 ACCTAGTTGTTCTCCTCTCATACATG 59.902 42.308 0.00 0.00 0.00 3.21
5928 9787 4.764172 AGTTGTTCTCCTCTCATACATGC 58.236 43.478 0.00 0.00 0.00 4.06
5929 9788 4.469227 AGTTGTTCTCCTCTCATACATGCT 59.531 41.667 0.00 0.00 0.00 3.79
5930 9789 4.397481 TGTTCTCCTCTCATACATGCTG 57.603 45.455 0.00 0.00 0.00 4.41
5931 9790 4.026052 TGTTCTCCTCTCATACATGCTGA 58.974 43.478 0.00 0.00 0.00 4.26
5932 9791 4.099113 TGTTCTCCTCTCATACATGCTGAG 59.901 45.833 16.21 16.21 41.23 3.35
5933 9792 3.908476 TCTCCTCTCATACATGCTGAGT 58.092 45.455 19.75 0.00 40.79 3.41
5934 9793 3.888323 TCTCCTCTCATACATGCTGAGTC 59.112 47.826 19.75 0.00 40.79 3.36
5935 9794 2.961741 TCCTCTCATACATGCTGAGTCC 59.038 50.000 19.75 0.00 40.79 3.85
5936 9795 2.697229 CCTCTCATACATGCTGAGTCCA 59.303 50.000 19.75 5.95 40.79 4.02
5937 9796 3.324268 CCTCTCATACATGCTGAGTCCAT 59.676 47.826 19.75 0.00 40.79 3.41
5938 9797 4.308265 CTCTCATACATGCTGAGTCCATG 58.692 47.826 19.75 7.58 44.28 3.66
5939 9798 2.806818 CTCATACATGCTGAGTCCATGC 59.193 50.000 14.75 1.97 42.89 4.06
5940 9799 2.171027 TCATACATGCTGAGTCCATGCA 59.829 45.455 8.73 7.05 42.89 3.96
5941 9800 3.146847 CATACATGCTGAGTCCATGCAT 58.853 45.455 8.73 8.79 46.74 3.96
5942 9801 2.139323 ACATGCTGAGTCCATGCATT 57.861 45.000 0.00 0.00 43.85 3.56
5943 9802 2.453521 ACATGCTGAGTCCATGCATTT 58.546 42.857 0.00 4.75 43.85 2.32
5944 9803 2.165641 ACATGCTGAGTCCATGCATTTG 59.834 45.455 0.00 7.08 43.85 2.32
5945 9804 1.913778 TGCTGAGTCCATGCATTTGT 58.086 45.000 0.00 0.00 0.00 2.83
5946 9805 2.241160 TGCTGAGTCCATGCATTTGTT 58.759 42.857 0.00 0.00 0.00 2.83
5947 9806 2.029739 TGCTGAGTCCATGCATTTGTTG 60.030 45.455 0.00 0.00 0.00 3.33
5948 9807 2.029649 GCTGAGTCCATGCATTTGTTGT 60.030 45.455 0.00 0.00 0.00 3.32
5949 9808 3.553508 GCTGAGTCCATGCATTTGTTGTT 60.554 43.478 0.00 0.00 0.00 2.83
5950 9809 3.979948 TGAGTCCATGCATTTGTTGTTG 58.020 40.909 0.00 0.00 0.00 3.33
5951 9810 3.384146 TGAGTCCATGCATTTGTTGTTGT 59.616 39.130 0.00 0.00 0.00 3.32
5952 9811 4.141981 TGAGTCCATGCATTTGTTGTTGTT 60.142 37.500 0.00 0.00 0.00 2.83
5953 9812 4.768583 AGTCCATGCATTTGTTGTTGTTT 58.231 34.783 0.00 0.00 0.00 2.83
5954 9813 4.571580 AGTCCATGCATTTGTTGTTGTTTG 59.428 37.500 0.00 0.00 0.00 2.93
5955 9814 3.875727 TCCATGCATTTGTTGTTGTTTGG 59.124 39.130 0.00 0.00 0.00 3.28
5956 9815 3.548415 CCATGCATTTGTTGTTGTTTGGC 60.548 43.478 0.00 0.00 0.00 4.52
5957 9816 2.703416 TGCATTTGTTGTTGTTTGGCA 58.297 38.095 0.00 0.00 0.00 4.92
5958 9817 2.676839 TGCATTTGTTGTTGTTTGGCAG 59.323 40.909 0.00 0.00 0.00 4.85
5959 9818 2.539344 GCATTTGTTGTTGTTTGGCAGC 60.539 45.455 0.00 0.00 0.00 5.25
5960 9819 1.354040 TTTGTTGTTGTTTGGCAGCG 58.646 45.000 0.00 0.00 0.00 5.18
5961 9820 0.459237 TTGTTGTTGTTTGGCAGCGG 60.459 50.000 0.00 0.00 0.00 5.52
5962 9821 1.140804 GTTGTTGTTTGGCAGCGGT 59.859 52.632 0.00 0.00 0.00 5.68
5963 9822 1.140589 TTGTTGTTTGGCAGCGGTG 59.859 52.632 10.98 10.98 0.00 4.94
5964 9823 1.599606 TTGTTGTTTGGCAGCGGTGT 61.600 50.000 17.07 0.00 0.00 4.16
5965 9824 0.748367 TGTTGTTTGGCAGCGGTGTA 60.748 50.000 17.07 2.90 0.00 2.90
5966 9825 0.596082 GTTGTTTGGCAGCGGTGTAT 59.404 50.000 17.07 0.00 0.00 2.29
5967 9826 0.595588 TTGTTTGGCAGCGGTGTATG 59.404 50.000 17.07 0.00 0.00 2.39
5968 9827 1.154035 GTTTGGCAGCGGTGTATGC 60.154 57.895 17.07 0.69 41.80 3.14
5969 9828 2.685829 TTTGGCAGCGGTGTATGCG 61.686 57.895 17.07 0.00 43.49 4.73
5974 9833 2.202797 AGCGGTGTATGCGCTGAG 60.203 61.111 9.73 0.00 37.60 3.35
5975 9834 2.202743 GCGGTGTATGCGCTGAGA 60.203 61.111 9.73 0.00 33.49 3.27
5976 9835 2.517450 GCGGTGTATGCGCTGAGAC 61.517 63.158 9.73 4.81 33.49 3.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
882 974 3.403968 GTCTTTCTTGGAAGTGACCTCC 58.596 50.000 0.00 0.00 0.00 4.30
1416 1508 2.100197 CATACCGAGGACTCCACAAGA 58.900 52.381 0.00 0.00 0.00 3.02
1449 1541 2.093181 TGCAAAGCCCATCACGTAGTAT 60.093 45.455 0.00 0.00 41.61 2.12
1574 1847 6.149640 GGTGAGTAAGGAAGAAAGCTAAAAGG 59.850 42.308 0.00 0.00 0.00 3.11
1819 2190 1.970640 CAGATCCACCATGGTCGGATA 59.029 52.381 31.91 17.49 39.03 2.59
1884 2313 9.057089 TCCAGCTTAGAAGAAACTAAAAGAAAG 57.943 33.333 0.00 0.00 32.95 2.62
1927 2681 2.567169 TCACCTTGACACCACTAGGATG 59.433 50.000 0.00 0.00 38.69 3.51
2018 2788 2.074729 ATAGCCTCGCCTACTGTTCT 57.925 50.000 0.00 0.00 0.00 3.01
2201 3018 3.285484 CCTTGCTCACTAAGGCATCAAT 58.715 45.455 0.00 0.00 38.38 2.57
2528 3512 6.053650 AGTTTATGCCCTCCTAAAACGATAC 58.946 40.000 0.00 0.00 35.67 2.24
2736 3756 2.173356 CCTGCCAGGACATCCATTAGAA 59.827 50.000 4.15 0.00 37.67 2.10
2970 3995 9.944376 GAATCTAAAACATGGCTGGACTATATA 57.056 33.333 0.00 0.00 0.00 0.86
3041 4067 3.619038 GGGCGAAGATTAGTCTGAAACAG 59.381 47.826 0.00 0.00 34.13 3.16
3271 4317 2.279935 ACTGTATTTTTCACCGCCCA 57.720 45.000 0.00 0.00 0.00 5.36
3361 4407 7.068348 GTGTAGAGAGAGAGAGAGAGAGAGTAA 59.932 44.444 0.00 0.00 0.00 2.24
3604 7218 9.965824 TTTCCAAGTTAAATCTTCAATGACTTC 57.034 29.630 0.00 0.00 0.00 3.01
4208 7887 7.388638 TCCCAACTATAGAAAAAGGATAGGG 57.611 40.000 6.78 0.00 0.00 3.53
4611 8409 0.037697 TGTACATCACCTCCACGCAC 60.038 55.000 0.00 0.00 0.00 5.34
4839 8637 1.171308 TCGTAACGAGGAACCCAGAG 58.829 55.000 0.00 0.00 0.00 3.35
4907 8718 1.983224 ACCTCACCTCGGTCAATGG 59.017 57.895 0.00 0.00 0.00 3.16
4994 8818 3.703001 CCATATATGGTCCAGGACACC 57.297 52.381 21.85 6.13 43.05 4.16
5058 8882 3.083997 GGAGCTCCCACCGGTGAT 61.084 66.667 36.07 15.40 34.14 3.06
5073 8900 0.179004 AATTGCTTCACCACCACGGA 60.179 50.000 0.00 0.00 38.63 4.69
5162 8989 2.568623 ACACCAAGAAGAAGCCGATT 57.431 45.000 0.00 0.00 0.00 3.34
5338 9196 7.127955 ACAATAATAATGGTAAAAATGGGGCCA 59.872 33.333 4.39 0.00 0.00 5.36
5381 9239 8.966868 AGACCAAAAATGAACGTTTCCATATAT 58.033 29.630 0.46 0.00 0.00 0.86
5382 9240 8.240682 CAGACCAAAAATGAACGTTTCCATATA 58.759 33.333 0.46 0.00 0.00 0.86
5383 9241 7.090173 CAGACCAAAAATGAACGTTTCCATAT 58.910 34.615 0.46 0.00 0.00 1.78
5384 9242 6.039941 ACAGACCAAAAATGAACGTTTCCATA 59.960 34.615 0.46 0.00 0.00 2.74
5385 9243 5.163457 ACAGACCAAAAATGAACGTTTCCAT 60.163 36.000 0.46 0.00 0.00 3.41
5386 9244 4.158764 ACAGACCAAAAATGAACGTTTCCA 59.841 37.500 0.46 0.00 0.00 3.53
5483 9342 3.742433 AATCCGCTTCCAGTGAGATAG 57.258 47.619 0.00 0.00 0.00 2.08
5516 9375 5.317808 TGAATCCCGTGAAGGAATTAACAA 58.682 37.500 0.00 0.00 45.00 2.83
5552 9411 2.698803 GGCAAATTGAATTGACCCACC 58.301 47.619 0.00 0.00 31.85 4.61
5569 9428 0.326595 TTCATTCCTAGTTGGCGGCA 59.673 50.000 7.97 7.97 35.26 5.69
5570 9429 1.459450 TTTCATTCCTAGTTGGCGGC 58.541 50.000 0.00 0.00 35.26 6.53
5571 9430 3.016736 ACATTTCATTCCTAGTTGGCGG 58.983 45.455 0.00 0.00 35.26 6.13
5572 9431 4.876107 AGTACATTTCATTCCTAGTTGGCG 59.124 41.667 0.00 0.00 35.26 5.69
5573 9432 5.297029 GGAGTACATTTCATTCCTAGTTGGC 59.703 44.000 0.00 0.00 35.26 4.52
5574 9433 5.823045 GGGAGTACATTTCATTCCTAGTTGG 59.177 44.000 0.00 0.00 37.10 3.77
5575 9434 6.653989 AGGGAGTACATTTCATTCCTAGTTG 58.346 40.000 0.00 0.00 0.00 3.16
5576 9435 6.126739 GGAGGGAGTACATTTCATTCCTAGTT 60.127 42.308 0.00 0.00 0.00 2.24
5577 9436 5.367060 GGAGGGAGTACATTTCATTCCTAGT 59.633 44.000 0.00 0.00 0.00 2.57
5578 9437 5.509840 CGGAGGGAGTACATTTCATTCCTAG 60.510 48.000 0.00 0.00 0.00 3.02
5579 9438 4.344102 CGGAGGGAGTACATTTCATTCCTA 59.656 45.833 0.00 0.00 0.00 2.94
5580 9439 3.134804 CGGAGGGAGTACATTTCATTCCT 59.865 47.826 0.00 0.00 0.00 3.36
5581 9440 3.118371 ACGGAGGGAGTACATTTCATTCC 60.118 47.826 0.00 0.00 0.00 3.01
5582 9441 4.138487 ACGGAGGGAGTACATTTCATTC 57.862 45.455 0.00 0.00 0.00 2.67
5583 9442 4.514401 GAACGGAGGGAGTACATTTCATT 58.486 43.478 0.00 0.00 0.00 2.57
5584 9443 3.118371 GGAACGGAGGGAGTACATTTCAT 60.118 47.826 0.00 0.00 0.00 2.57
5585 9444 2.235402 GGAACGGAGGGAGTACATTTCA 59.765 50.000 0.00 0.00 0.00 2.69
5586 9445 2.500504 AGGAACGGAGGGAGTACATTTC 59.499 50.000 0.00 0.00 0.00 2.17
5587 9446 2.547990 AGGAACGGAGGGAGTACATTT 58.452 47.619 0.00 0.00 0.00 2.32
5588 9447 2.249309 AGGAACGGAGGGAGTACATT 57.751 50.000 0.00 0.00 0.00 2.71
5589 9448 3.393426 TTAGGAACGGAGGGAGTACAT 57.607 47.619 0.00 0.00 0.00 2.29
5590 9449 2.905415 TTAGGAACGGAGGGAGTACA 57.095 50.000 0.00 0.00 0.00 2.90
5591 9450 7.232330 ACTTATATTTAGGAACGGAGGGAGTAC 59.768 40.741 0.00 0.00 0.00 2.73
5592 9451 7.300658 ACTTATATTTAGGAACGGAGGGAGTA 58.699 38.462 0.00 0.00 0.00 2.59
5593 9452 6.141790 ACTTATATTTAGGAACGGAGGGAGT 58.858 40.000 0.00 0.00 0.00 3.85
5594 9453 6.494146 AGACTTATATTTAGGAACGGAGGGAG 59.506 42.308 0.00 0.00 0.00 4.30
5595 9454 6.379579 AGACTTATATTTAGGAACGGAGGGA 58.620 40.000 0.00 0.00 0.00 4.20
5596 9455 6.667558 AGACTTATATTTAGGAACGGAGGG 57.332 41.667 0.00 0.00 0.00 4.30
5597 9456 8.959705 AAAAGACTTATATTTAGGAACGGAGG 57.040 34.615 0.00 0.00 0.00 4.30
5614 9473 9.847224 TTTGTAGTGGAATCTCTAAAAAGACTT 57.153 29.630 0.00 0.00 28.58 3.01
5615 9474 9.274206 GTTTGTAGTGGAATCTCTAAAAAGACT 57.726 33.333 3.22 0.00 30.99 3.24
5616 9475 9.052759 TGTTTGTAGTGGAATCTCTAAAAAGAC 57.947 33.333 3.22 0.00 30.99 3.01
5617 9476 9.621629 TTGTTTGTAGTGGAATCTCTAAAAAGA 57.378 29.630 3.22 0.86 30.99 2.52
5618 9477 9.665264 GTTGTTTGTAGTGGAATCTCTAAAAAG 57.335 33.333 3.22 0.00 30.99 2.27
5619 9478 9.179909 TGTTGTTTGTAGTGGAATCTCTAAAAA 57.820 29.630 0.00 0.00 0.00 1.94
5620 9479 8.740123 TGTTGTTTGTAGTGGAATCTCTAAAA 57.260 30.769 0.00 0.00 0.00 1.52
5621 9480 8.918202 ATGTTGTTTGTAGTGGAATCTCTAAA 57.082 30.769 0.00 0.00 0.00 1.85
5622 9481 9.431887 GTATGTTGTTTGTAGTGGAATCTCTAA 57.568 33.333 0.00 0.00 0.00 2.10
5623 9482 7.758076 CGTATGTTGTTTGTAGTGGAATCTCTA 59.242 37.037 0.00 0.00 0.00 2.43
5624 9483 6.590292 CGTATGTTGTTTGTAGTGGAATCTCT 59.410 38.462 0.00 0.00 0.00 3.10
5625 9484 6.183360 CCGTATGTTGTTTGTAGTGGAATCTC 60.183 42.308 0.00 0.00 0.00 2.75
5626 9485 5.642063 CCGTATGTTGTTTGTAGTGGAATCT 59.358 40.000 0.00 0.00 0.00 2.40
5627 9486 5.640357 TCCGTATGTTGTTTGTAGTGGAATC 59.360 40.000 0.00 0.00 0.00 2.52
5628 9487 5.553123 TCCGTATGTTGTTTGTAGTGGAAT 58.447 37.500 0.00 0.00 0.00 3.01
5629 9488 4.958509 TCCGTATGTTGTTTGTAGTGGAA 58.041 39.130 0.00 0.00 0.00 3.53
5630 9489 4.603989 TCCGTATGTTGTTTGTAGTGGA 57.396 40.909 0.00 0.00 0.00 4.02
5631 9490 4.693566 ACATCCGTATGTTGTTTGTAGTGG 59.306 41.667 0.00 0.00 44.07 4.00
5632 9491 5.856126 ACATCCGTATGTTGTTTGTAGTG 57.144 39.130 0.00 0.00 44.07 2.74
5673 9532 5.499334 CGAAGCGAAATGAGTGAATCTACAC 60.499 44.000 0.00 0.00 40.60 2.90
5674 9533 4.562789 CGAAGCGAAATGAGTGAATCTACA 59.437 41.667 0.00 0.00 0.00 2.74
5675 9534 4.563184 ACGAAGCGAAATGAGTGAATCTAC 59.437 41.667 0.00 0.00 0.00 2.59
5676 9535 4.744570 ACGAAGCGAAATGAGTGAATCTA 58.255 39.130 0.00 0.00 0.00 1.98
5677 9536 3.589988 ACGAAGCGAAATGAGTGAATCT 58.410 40.909 0.00 0.00 0.00 2.40
5678 9537 3.999229 ACGAAGCGAAATGAGTGAATC 57.001 42.857 0.00 0.00 0.00 2.52
5679 9538 4.870426 ACATACGAAGCGAAATGAGTGAAT 59.130 37.500 11.59 0.00 31.99 2.57
5680 9539 4.242475 ACATACGAAGCGAAATGAGTGAA 58.758 39.130 11.59 0.00 31.99 3.18
5681 9540 3.845178 ACATACGAAGCGAAATGAGTGA 58.155 40.909 11.59 0.00 31.99 3.41
5682 9541 4.798907 ACTACATACGAAGCGAAATGAGTG 59.201 41.667 11.59 0.00 31.99 3.51
5683 9542 4.995124 ACTACATACGAAGCGAAATGAGT 58.005 39.130 11.59 8.65 31.99 3.41
5684 9543 4.441415 GGACTACATACGAAGCGAAATGAG 59.559 45.833 11.59 8.24 31.99 2.90
5685 9544 4.142337 TGGACTACATACGAAGCGAAATGA 60.142 41.667 11.59 0.06 31.99 2.57
5686 9545 4.109766 TGGACTACATACGAAGCGAAATG 58.890 43.478 0.00 0.00 33.06 2.32
5687 9546 4.380841 TGGACTACATACGAAGCGAAAT 57.619 40.909 0.00 0.00 0.00 2.17
5688 9547 3.853831 TGGACTACATACGAAGCGAAA 57.146 42.857 0.00 0.00 0.00 3.46
5689 9548 4.577693 ACTATGGACTACATACGAAGCGAA 59.422 41.667 0.00 0.00 41.03 4.70
5690 9549 4.024302 CACTATGGACTACATACGAAGCGA 60.024 45.833 0.00 0.00 41.03 4.93
5691 9550 4.024302 TCACTATGGACTACATACGAAGCG 60.024 45.833 0.00 0.00 41.03 4.68
5692 9551 5.434352 TCACTATGGACTACATACGAAGC 57.566 43.478 0.00 0.00 41.03 3.86
5693 9552 8.353684 AGATTTCACTATGGACTACATACGAAG 58.646 37.037 0.00 0.00 41.03 3.79
5694 9553 8.234136 AGATTTCACTATGGACTACATACGAA 57.766 34.615 0.00 0.00 41.03 3.85
5695 9554 7.720074 AGAGATTTCACTATGGACTACATACGA 59.280 37.037 0.00 0.00 41.03 3.43
5696 9555 7.877003 AGAGATTTCACTATGGACTACATACG 58.123 38.462 0.00 0.00 41.03 3.06
5700 9559 8.696374 CCTTTAGAGATTTCACTATGGACTACA 58.304 37.037 0.00 0.00 0.00 2.74
5701 9560 8.145122 CCCTTTAGAGATTTCACTATGGACTAC 58.855 40.741 0.00 0.00 0.00 2.73
5702 9561 8.065627 TCCCTTTAGAGATTTCACTATGGACTA 58.934 37.037 0.00 0.00 0.00 2.59
5703 9562 6.903534 TCCCTTTAGAGATTTCACTATGGACT 59.096 38.462 0.00 0.00 0.00 3.85
5704 9563 6.987404 GTCCCTTTAGAGATTTCACTATGGAC 59.013 42.308 0.00 0.00 32.05 4.02
5705 9564 6.903534 AGTCCCTTTAGAGATTTCACTATGGA 59.096 38.462 0.00 0.00 0.00 3.41
5706 9565 7.130681 AGTCCCTTTAGAGATTTCACTATGG 57.869 40.000 0.00 0.00 0.00 2.74
5715 9574 9.676129 TCCTGAATATAAGTCCCTTTAGAGATT 57.324 33.333 0.00 0.00 0.00 2.40
5716 9575 9.676129 TTCCTGAATATAAGTCCCTTTAGAGAT 57.324 33.333 0.00 0.00 0.00 2.75
5717 9576 8.925338 GTTCCTGAATATAAGTCCCTTTAGAGA 58.075 37.037 0.00 0.00 0.00 3.10
5718 9577 8.705594 TGTTCCTGAATATAAGTCCCTTTAGAG 58.294 37.037 0.00 0.00 0.00 2.43
5719 9578 8.618240 TGTTCCTGAATATAAGTCCCTTTAGA 57.382 34.615 0.00 0.00 0.00 2.10
5720 9579 8.705594 TCTGTTCCTGAATATAAGTCCCTTTAG 58.294 37.037 0.00 0.00 0.00 1.85
5721 9580 8.618240 TCTGTTCCTGAATATAAGTCCCTTTA 57.382 34.615 0.00 0.00 0.00 1.85
5722 9581 7.366011 CCTCTGTTCCTGAATATAAGTCCCTTT 60.366 40.741 0.00 0.00 0.00 3.11
5723 9582 6.100424 CCTCTGTTCCTGAATATAAGTCCCTT 59.900 42.308 0.00 0.00 0.00 3.95
5724 9583 5.604650 CCTCTGTTCCTGAATATAAGTCCCT 59.395 44.000 0.00 0.00 0.00 4.20
5725 9584 5.221742 CCCTCTGTTCCTGAATATAAGTCCC 60.222 48.000 0.00 0.00 0.00 4.46
5726 9585 5.602978 TCCCTCTGTTCCTGAATATAAGTCC 59.397 44.000 0.00 0.00 0.00 3.85
5727 9586 6.325286 ACTCCCTCTGTTCCTGAATATAAGTC 59.675 42.308 0.00 0.00 0.00 3.01
5728 9587 6.206042 ACTCCCTCTGTTCCTGAATATAAGT 58.794 40.000 0.00 0.00 0.00 2.24
5729 9588 6.739331 ACTCCCTCTGTTCCTGAATATAAG 57.261 41.667 0.00 0.00 0.00 1.73
5730 9589 9.892444 TTATACTCCCTCTGTTCCTGAATATAA 57.108 33.333 0.00 0.00 0.00 0.98
5732 9591 8.980832 ATTATACTCCCTCTGTTCCTGAATAT 57.019 34.615 0.00 0.00 0.00 1.28
5733 9592 7.176865 CGATTATACTCCCTCTGTTCCTGAATA 59.823 40.741 0.00 0.00 0.00 1.75
5734 9593 6.015010 CGATTATACTCCCTCTGTTCCTGAAT 60.015 42.308 0.00 0.00 0.00 2.57
5735 9594 5.302059 CGATTATACTCCCTCTGTTCCTGAA 59.698 44.000 0.00 0.00 0.00 3.02
5736 9595 4.827835 CGATTATACTCCCTCTGTTCCTGA 59.172 45.833 0.00 0.00 0.00 3.86
5737 9596 4.827835 TCGATTATACTCCCTCTGTTCCTG 59.172 45.833 0.00 0.00 0.00 3.86
5738 9597 5.063017 TCGATTATACTCCCTCTGTTCCT 57.937 43.478 0.00 0.00 0.00 3.36
5739 9598 5.477291 TGATCGATTATACTCCCTCTGTTCC 59.523 44.000 0.00 0.00 0.00 3.62
5740 9599 6.576662 TGATCGATTATACTCCCTCTGTTC 57.423 41.667 0.00 0.00 0.00 3.18
5741 9600 6.015010 CCTTGATCGATTATACTCCCTCTGTT 60.015 42.308 0.00 0.00 0.00 3.16
5742 9601 5.478679 CCTTGATCGATTATACTCCCTCTGT 59.521 44.000 0.00 0.00 0.00 3.41
5743 9602 5.105554 CCCTTGATCGATTATACTCCCTCTG 60.106 48.000 0.00 0.00 0.00 3.35
5744 9603 5.020132 CCCTTGATCGATTATACTCCCTCT 58.980 45.833 0.00 0.00 0.00 3.69
5745 9604 5.017490 TCCCTTGATCGATTATACTCCCTC 58.983 45.833 0.00 0.00 0.00 4.30
5746 9605 5.011982 TCCCTTGATCGATTATACTCCCT 57.988 43.478 0.00 0.00 0.00 4.20
5747 9606 5.480205 GTTCCCTTGATCGATTATACTCCC 58.520 45.833 0.00 0.00 0.00 4.30
5748 9607 5.011738 TGGTTCCCTTGATCGATTATACTCC 59.988 44.000 0.00 0.00 0.00 3.85
5749 9608 6.097915 TGGTTCCCTTGATCGATTATACTC 57.902 41.667 0.00 0.00 0.00 2.59
5750 9609 6.688073 ATGGTTCCCTTGATCGATTATACT 57.312 37.500 0.00 0.00 0.00 2.12
5751 9610 6.934645 TGAATGGTTCCCTTGATCGATTATAC 59.065 38.462 0.00 0.00 0.00 1.47
5752 9611 7.073457 TGAATGGTTCCCTTGATCGATTATA 57.927 36.000 0.00 0.00 0.00 0.98
5753 9612 5.940617 TGAATGGTTCCCTTGATCGATTAT 58.059 37.500 0.00 0.00 0.00 1.28
5754 9613 5.366482 TGAATGGTTCCCTTGATCGATTA 57.634 39.130 0.00 0.00 0.00 1.75
5755 9614 4.235079 TGAATGGTTCCCTTGATCGATT 57.765 40.909 0.00 0.00 0.00 3.34
5756 9615 3.931907 TGAATGGTTCCCTTGATCGAT 57.068 42.857 0.00 0.00 0.00 3.59
5757 9616 3.712016 TTGAATGGTTCCCTTGATCGA 57.288 42.857 0.00 0.00 0.00 3.59
5758 9617 3.947196 TGATTGAATGGTTCCCTTGATCG 59.053 43.478 0.00 0.00 0.00 3.69
5759 9618 4.098501 GGTGATTGAATGGTTCCCTTGATC 59.901 45.833 0.00 0.00 0.00 2.92
5760 9619 4.026052 GGTGATTGAATGGTTCCCTTGAT 58.974 43.478 0.00 0.00 0.00 2.57
5761 9620 3.075882 AGGTGATTGAATGGTTCCCTTGA 59.924 43.478 0.00 0.00 0.00 3.02
5762 9621 3.434309 AGGTGATTGAATGGTTCCCTTG 58.566 45.455 0.00 0.00 0.00 3.61
5763 9622 3.701664 GAGGTGATTGAATGGTTCCCTT 58.298 45.455 0.00 0.00 0.00 3.95
5764 9623 2.356125 CGAGGTGATTGAATGGTTCCCT 60.356 50.000 0.00 0.00 0.00 4.20
5765 9624 2.017049 CGAGGTGATTGAATGGTTCCC 58.983 52.381 0.00 0.00 0.00 3.97
5766 9625 2.017049 CCGAGGTGATTGAATGGTTCC 58.983 52.381 0.00 0.00 0.00 3.62
5767 9626 2.678336 GACCGAGGTGATTGAATGGTTC 59.322 50.000 0.00 0.00 0.00 3.62
5768 9627 2.305927 AGACCGAGGTGATTGAATGGTT 59.694 45.455 0.00 0.00 0.00 3.67
5769 9628 1.909302 AGACCGAGGTGATTGAATGGT 59.091 47.619 0.00 0.00 0.00 3.55
5770 9629 2.698855 AGACCGAGGTGATTGAATGG 57.301 50.000 0.00 0.00 0.00 3.16
5771 9630 3.426695 GCAAAGACCGAGGTGATTGAATG 60.427 47.826 16.29 3.18 0.00 2.67
5772 9631 2.749621 GCAAAGACCGAGGTGATTGAAT 59.250 45.455 16.29 0.00 0.00 2.57
5773 9632 2.151202 GCAAAGACCGAGGTGATTGAA 58.849 47.619 16.29 0.00 0.00 2.69
5774 9633 1.347707 AGCAAAGACCGAGGTGATTGA 59.652 47.619 16.29 0.00 0.00 2.57
5775 9634 1.813513 AGCAAAGACCGAGGTGATTG 58.186 50.000 0.00 5.93 0.00 2.67
5776 9635 2.301870 TGTAGCAAAGACCGAGGTGATT 59.698 45.455 0.00 0.00 0.00 2.57
5777 9636 1.899814 TGTAGCAAAGACCGAGGTGAT 59.100 47.619 0.00 0.00 0.00 3.06
5778 9637 1.334160 TGTAGCAAAGACCGAGGTGA 58.666 50.000 0.00 0.00 0.00 4.02
5779 9638 1.798813 GTTGTAGCAAAGACCGAGGTG 59.201 52.381 0.00 0.00 0.00 4.00
5780 9639 1.414919 TGTTGTAGCAAAGACCGAGGT 59.585 47.619 0.00 0.00 0.00 3.85
5781 9640 2.163818 TGTTGTAGCAAAGACCGAGG 57.836 50.000 0.00 0.00 0.00 4.63
5782 9641 3.390135 TCTTGTTGTAGCAAAGACCGAG 58.610 45.455 0.00 0.00 0.00 4.63
5783 9642 3.462483 TCTTGTTGTAGCAAAGACCGA 57.538 42.857 0.00 0.00 0.00 4.69
5784 9643 3.807622 TCTTCTTGTTGTAGCAAAGACCG 59.192 43.478 0.00 0.00 0.00 4.79
5785 9644 4.816925 ACTCTTCTTGTTGTAGCAAAGACC 59.183 41.667 0.00 0.00 0.00 3.85
5786 9645 5.277538 CCACTCTTCTTGTTGTAGCAAAGAC 60.278 44.000 0.00 0.00 0.00 3.01
5787 9646 4.816385 CCACTCTTCTTGTTGTAGCAAAGA 59.184 41.667 0.00 0.00 0.00 2.52
5788 9647 4.576463 ACCACTCTTCTTGTTGTAGCAAAG 59.424 41.667 0.00 0.00 0.00 2.77
5789 9648 4.523083 ACCACTCTTCTTGTTGTAGCAAA 58.477 39.130 0.00 0.00 0.00 3.68
5790 9649 4.150897 ACCACTCTTCTTGTTGTAGCAA 57.849 40.909 0.00 0.00 0.00 3.91
5791 9650 3.838244 ACCACTCTTCTTGTTGTAGCA 57.162 42.857 0.00 0.00 0.00 3.49
5792 9651 4.381411 AGAACCACTCTTCTTGTTGTAGC 58.619 43.478 0.00 0.00 0.00 3.58
5793 9652 5.629849 CGTAGAACCACTCTTCTTGTTGTAG 59.370 44.000 0.00 0.00 35.41 2.74
5794 9653 5.068198 ACGTAGAACCACTCTTCTTGTTGTA 59.932 40.000 0.00 0.00 35.41 2.41
5795 9654 4.142004 ACGTAGAACCACTCTTCTTGTTGT 60.142 41.667 0.00 0.00 35.41 3.32
5796 9655 4.369182 ACGTAGAACCACTCTTCTTGTTG 58.631 43.478 0.00 0.00 35.41 3.33
5797 9656 4.667519 ACGTAGAACCACTCTTCTTGTT 57.332 40.909 0.00 0.00 35.41 2.83
5798 9657 4.581824 TGTACGTAGAACCACTCTTCTTGT 59.418 41.667 0.00 0.00 35.41 3.16
5799 9658 5.117355 TGTACGTAGAACCACTCTTCTTG 57.883 43.478 0.00 0.00 35.41 3.02
5800 9659 5.105837 GGATGTACGTAGAACCACTCTTCTT 60.106 44.000 13.34 0.00 35.41 2.52
5801 9660 4.398673 GGATGTACGTAGAACCACTCTTCT 59.601 45.833 13.34 0.00 35.41 2.85
5802 9661 4.439837 GGGATGTACGTAGAACCACTCTTC 60.440 50.000 18.77 0.01 35.41 2.87
5803 9662 3.446516 GGGATGTACGTAGAACCACTCTT 59.553 47.826 18.77 0.00 35.41 2.85
5804 9663 3.022406 GGGATGTACGTAGAACCACTCT 58.978 50.000 18.77 0.00 38.28 3.24
5805 9664 2.223433 CGGGATGTACGTAGAACCACTC 60.223 54.545 18.77 2.03 0.00 3.51
5806 9665 1.747355 CGGGATGTACGTAGAACCACT 59.253 52.381 18.77 0.00 0.00 4.00
5807 9666 1.202336 CCGGGATGTACGTAGAACCAC 60.202 57.143 18.77 8.77 0.00 4.16
5808 9667 1.105457 CCGGGATGTACGTAGAACCA 58.895 55.000 18.77 3.89 0.00 3.67
5809 9668 1.392589 TCCGGGATGTACGTAGAACC 58.607 55.000 10.21 10.21 0.00 3.62
5810 9669 2.620115 TCATCCGGGATGTACGTAGAAC 59.380 50.000 30.70 0.00 40.55 3.01
5811 9670 2.620115 GTCATCCGGGATGTACGTAGAA 59.380 50.000 30.70 11.11 40.55 2.10
5812 9671 2.224606 GTCATCCGGGATGTACGTAGA 58.775 52.381 30.70 11.79 40.55 2.59
5813 9672 1.951602 TGTCATCCGGGATGTACGTAG 59.048 52.381 30.70 9.10 40.55 3.51
5814 9673 2.055684 TGTCATCCGGGATGTACGTA 57.944 50.000 30.70 13.14 40.55 3.57
5815 9674 1.068588 CATGTCATCCGGGATGTACGT 59.931 52.381 30.70 24.44 40.55 3.57
5816 9675 1.339929 TCATGTCATCCGGGATGTACG 59.660 52.381 30.70 19.53 40.55 3.67
5817 9676 2.365617 AGTCATGTCATCCGGGATGTAC 59.634 50.000 30.70 25.86 40.55 2.90
5818 9677 2.677914 AGTCATGTCATCCGGGATGTA 58.322 47.619 30.70 22.57 40.55 2.29
5819 9678 1.500474 AGTCATGTCATCCGGGATGT 58.500 50.000 30.70 13.83 40.55 3.06
5820 9679 2.365293 TGTAGTCATGTCATCCGGGATG 59.635 50.000 27.60 27.60 41.00 3.51
5821 9680 2.365617 GTGTAGTCATGTCATCCGGGAT 59.634 50.000 2.97 2.97 0.00 3.85
5822 9681 1.754803 GTGTAGTCATGTCATCCGGGA 59.245 52.381 0.00 0.00 0.00 5.14
5823 9682 1.757118 AGTGTAGTCATGTCATCCGGG 59.243 52.381 0.00 0.00 0.00 5.73
5824 9683 2.690497 AGAGTGTAGTCATGTCATCCGG 59.310 50.000 0.00 0.00 0.00 5.14
5825 9684 3.378427 TGAGAGTGTAGTCATGTCATCCG 59.622 47.826 0.00 0.00 0.00 4.18
5826 9685 4.158579 TGTGAGAGTGTAGTCATGTCATCC 59.841 45.833 0.00 0.00 0.00 3.51
5827 9686 5.316327 TGTGAGAGTGTAGTCATGTCATC 57.684 43.478 0.00 0.00 0.00 2.92
5828 9687 5.728637 TTGTGAGAGTGTAGTCATGTCAT 57.271 39.130 0.00 0.00 0.00 3.06
5829 9688 5.301805 TCTTTGTGAGAGTGTAGTCATGTCA 59.698 40.000 0.00 0.00 0.00 3.58
5830 9689 5.773575 TCTTTGTGAGAGTGTAGTCATGTC 58.226 41.667 0.00 0.00 0.00 3.06
5831 9690 5.791336 TCTTTGTGAGAGTGTAGTCATGT 57.209 39.130 0.00 0.00 0.00 3.21
5832 9691 6.977502 CCTATCTTTGTGAGAGTGTAGTCATG 59.022 42.308 0.00 0.00 37.93 3.07
5833 9692 6.892456 TCCTATCTTTGTGAGAGTGTAGTCAT 59.108 38.462 0.00 0.00 37.93 3.06
5834 9693 6.246163 TCCTATCTTTGTGAGAGTGTAGTCA 58.754 40.000 0.00 0.00 37.93 3.41
5835 9694 6.761099 TCCTATCTTTGTGAGAGTGTAGTC 57.239 41.667 0.00 0.00 37.93 2.59
5836 9695 7.726033 AATCCTATCTTTGTGAGAGTGTAGT 57.274 36.000 0.00 0.00 37.93 2.73
5837 9696 7.858382 CGTAATCCTATCTTTGTGAGAGTGTAG 59.142 40.741 0.00 0.00 37.93 2.74
5838 9697 7.555195 TCGTAATCCTATCTTTGTGAGAGTGTA 59.445 37.037 0.00 0.00 37.93 2.90
5839 9698 6.377429 TCGTAATCCTATCTTTGTGAGAGTGT 59.623 38.462 0.00 0.00 37.93 3.55
5840 9699 6.796426 TCGTAATCCTATCTTTGTGAGAGTG 58.204 40.000 0.00 0.00 37.93 3.51
5841 9700 7.285629 TCATCGTAATCCTATCTTTGTGAGAGT 59.714 37.037 0.00 0.00 37.93 3.24
5842 9701 7.652727 TCATCGTAATCCTATCTTTGTGAGAG 58.347 38.462 0.00 0.00 37.93 3.20
5843 9702 7.582667 TCATCGTAATCCTATCTTTGTGAGA 57.417 36.000 0.00 0.00 39.13 3.27
5844 9703 9.914131 TTATCATCGTAATCCTATCTTTGTGAG 57.086 33.333 0.00 0.00 0.00 3.51
5849 9708 9.712305 CCAGTTTATCATCGTAATCCTATCTTT 57.288 33.333 0.00 0.00 0.00 2.52
5850 9709 8.314751 CCCAGTTTATCATCGTAATCCTATCTT 58.685 37.037 0.00 0.00 0.00 2.40
5851 9710 7.674348 TCCCAGTTTATCATCGTAATCCTATCT 59.326 37.037 0.00 0.00 0.00 1.98
5852 9711 7.760340 GTCCCAGTTTATCATCGTAATCCTATC 59.240 40.741 0.00 0.00 0.00 2.08
5853 9712 7.234782 TGTCCCAGTTTATCATCGTAATCCTAT 59.765 37.037 0.00 0.00 0.00 2.57
5854 9713 6.551975 TGTCCCAGTTTATCATCGTAATCCTA 59.448 38.462 0.00 0.00 0.00 2.94
5855 9714 5.365605 TGTCCCAGTTTATCATCGTAATCCT 59.634 40.000 0.00 0.00 0.00 3.24
5856 9715 5.607477 TGTCCCAGTTTATCATCGTAATCC 58.393 41.667 0.00 0.00 0.00 3.01
5857 9716 7.730364 AATGTCCCAGTTTATCATCGTAATC 57.270 36.000 0.00 0.00 0.00 1.75
5858 9717 7.013274 CCAAATGTCCCAGTTTATCATCGTAAT 59.987 37.037 0.00 0.00 0.00 1.89
5859 9718 6.317642 CCAAATGTCCCAGTTTATCATCGTAA 59.682 38.462 0.00 0.00 0.00 3.18
5860 9719 5.820423 CCAAATGTCCCAGTTTATCATCGTA 59.180 40.000 0.00 0.00 0.00 3.43
5861 9720 4.640201 CCAAATGTCCCAGTTTATCATCGT 59.360 41.667 0.00 0.00 0.00 3.73
5862 9721 4.640201 ACCAAATGTCCCAGTTTATCATCG 59.360 41.667 0.00 0.00 0.00 3.84
5863 9722 6.238759 GCTACCAAATGTCCCAGTTTATCATC 60.239 42.308 0.00 0.00 0.00 2.92
5864 9723 5.594317 GCTACCAAATGTCCCAGTTTATCAT 59.406 40.000 0.00 0.00 0.00 2.45
5865 9724 4.947388 GCTACCAAATGTCCCAGTTTATCA 59.053 41.667 0.00 0.00 0.00 2.15
5866 9725 4.947388 TGCTACCAAATGTCCCAGTTTATC 59.053 41.667 0.00 0.00 0.00 1.75
5867 9726 4.929479 TGCTACCAAATGTCCCAGTTTAT 58.071 39.130 0.00 0.00 0.00 1.40
5868 9727 4.374689 TGCTACCAAATGTCCCAGTTTA 57.625 40.909 0.00 0.00 0.00 2.01
5869 9728 3.237268 TGCTACCAAATGTCCCAGTTT 57.763 42.857 0.00 0.00 0.00 2.66
5870 9729 2.969821 TGCTACCAAATGTCCCAGTT 57.030 45.000 0.00 0.00 0.00 3.16
5871 9730 2.041620 ACATGCTACCAAATGTCCCAGT 59.958 45.455 0.00 0.00 31.33 4.00
5872 9731 2.726821 ACATGCTACCAAATGTCCCAG 58.273 47.619 0.00 0.00 31.33 4.45
5873 9732 2.897271 ACATGCTACCAAATGTCCCA 57.103 45.000 0.00 0.00 31.33 4.37
5874 9733 3.569701 CCATACATGCTACCAAATGTCCC 59.430 47.826 0.00 0.00 38.05 4.46
5875 9734 4.275936 GTCCATACATGCTACCAAATGTCC 59.724 45.833 0.00 0.00 38.05 4.02
5876 9735 4.275936 GGTCCATACATGCTACCAAATGTC 59.724 45.833 0.00 0.00 38.05 3.06
5877 9736 4.079787 AGGTCCATACATGCTACCAAATGT 60.080 41.667 12.05 0.00 40.13 2.71
5878 9737 4.464008 AGGTCCATACATGCTACCAAATG 58.536 43.478 12.05 0.00 35.78 2.32
5879 9738 4.796110 AGGTCCATACATGCTACCAAAT 57.204 40.909 12.05 0.00 35.78 2.32
5880 9739 5.433526 GTTAGGTCCATACATGCTACCAAA 58.566 41.667 12.05 1.34 35.78 3.28
5881 9740 4.141574 GGTTAGGTCCATACATGCTACCAA 60.142 45.833 12.05 4.82 35.78 3.67
5882 9741 3.389983 GGTTAGGTCCATACATGCTACCA 59.610 47.826 12.05 0.48 35.78 3.25
5883 9742 3.646637 AGGTTAGGTCCATACATGCTACC 59.353 47.826 0.00 4.58 34.41 3.18
5884 9743 4.957684 AGGTTAGGTCCATACATGCTAC 57.042 45.455 0.00 0.00 0.00 3.58
5885 9744 5.712752 ACTAGGTTAGGTCCATACATGCTA 58.287 41.667 0.00 0.00 0.00 3.49
5886 9745 4.557705 ACTAGGTTAGGTCCATACATGCT 58.442 43.478 0.00 0.00 0.00 3.79
5887 9746 4.957684 ACTAGGTTAGGTCCATACATGC 57.042 45.455 0.00 0.00 0.00 4.06
5888 9747 6.235231 ACAACTAGGTTAGGTCCATACATG 57.765 41.667 0.00 0.00 0.00 3.21
5889 9748 6.672657 AGAACAACTAGGTTAGGTCCATACAT 59.327 38.462 0.00 0.00 0.00 2.29
5890 9749 6.021030 AGAACAACTAGGTTAGGTCCATACA 58.979 40.000 0.00 0.00 0.00 2.29
5891 9750 6.406737 GGAGAACAACTAGGTTAGGTCCATAC 60.407 46.154 0.00 0.00 30.83 2.39
5892 9751 5.659971 GGAGAACAACTAGGTTAGGTCCATA 59.340 44.000 0.00 0.00 30.83 2.74
5893 9752 4.470304 GGAGAACAACTAGGTTAGGTCCAT 59.530 45.833 0.00 0.00 30.83 3.41
5894 9753 3.836562 GGAGAACAACTAGGTTAGGTCCA 59.163 47.826 0.00 0.00 30.83 4.02
5895 9754 4.095211 AGGAGAACAACTAGGTTAGGTCC 58.905 47.826 0.00 0.00 0.00 4.46
5896 9755 5.018149 AGAGGAGAACAACTAGGTTAGGTC 58.982 45.833 0.00 0.00 0.00 3.85
5897 9756 5.013258 AGAGGAGAACAACTAGGTTAGGT 57.987 43.478 0.00 0.00 0.00 3.08
5898 9757 5.017490 TGAGAGGAGAACAACTAGGTTAGG 58.983 45.833 0.00 0.00 0.00 2.69
5899 9758 6.783708 ATGAGAGGAGAACAACTAGGTTAG 57.216 41.667 0.00 0.00 0.00 2.34
5900 9759 7.179966 TGTATGAGAGGAGAACAACTAGGTTA 58.820 38.462 0.00 0.00 0.00 2.85
5901 9760 6.017192 TGTATGAGAGGAGAACAACTAGGTT 58.983 40.000 0.00 0.00 0.00 3.50
5902 9761 5.580998 TGTATGAGAGGAGAACAACTAGGT 58.419 41.667 0.00 0.00 0.00 3.08
5903 9762 6.511416 CATGTATGAGAGGAGAACAACTAGG 58.489 44.000 0.00 0.00 0.00 3.02
5904 9763 5.982516 GCATGTATGAGAGGAGAACAACTAG 59.017 44.000 0.00 0.00 0.00 2.57
5905 9764 5.658634 AGCATGTATGAGAGGAGAACAACTA 59.341 40.000 0.00 0.00 0.00 2.24
5906 9765 4.469227 AGCATGTATGAGAGGAGAACAACT 59.531 41.667 0.00 0.00 0.00 3.16
5907 9766 4.569966 CAGCATGTATGAGAGGAGAACAAC 59.430 45.833 0.00 0.00 0.00 3.32
5908 9767 4.467438 TCAGCATGTATGAGAGGAGAACAA 59.533 41.667 0.00 0.00 37.40 2.83
5909 9768 4.026052 TCAGCATGTATGAGAGGAGAACA 58.974 43.478 0.00 0.00 37.40 3.18
5910 9769 4.099266 ACTCAGCATGTATGAGAGGAGAAC 59.901 45.833 26.85 0.00 45.80 3.01
5911 9770 4.285020 ACTCAGCATGTATGAGAGGAGAA 58.715 43.478 26.85 0.00 45.80 2.87
5912 9771 3.888323 GACTCAGCATGTATGAGAGGAGA 59.112 47.826 26.85 0.00 45.80 3.71
5913 9772 3.005684 GGACTCAGCATGTATGAGAGGAG 59.994 52.174 26.85 11.57 45.80 3.69
5914 9773 2.961741 GGACTCAGCATGTATGAGAGGA 59.038 50.000 26.85 2.20 45.80 3.71
5915 9774 2.697229 TGGACTCAGCATGTATGAGAGG 59.303 50.000 26.85 10.18 45.80 3.69
5916 9775 4.308265 CATGGACTCAGCATGTATGAGAG 58.692 47.826 26.85 15.07 45.80 3.20
5917 9776 3.493873 GCATGGACTCAGCATGTATGAGA 60.494 47.826 26.85 12.27 45.80 3.27
5918 9777 5.042905 ATGCATGGACTCAGCATGTATGAG 61.043 45.833 21.49 21.49 46.34 2.90
5919 9778 2.171027 TGCATGGACTCAGCATGTATGA 59.829 45.455 0.00 0.00 37.40 2.15
5920 9779 2.567985 TGCATGGACTCAGCATGTATG 58.432 47.619 0.00 0.00 37.40 2.39
5921 9780 3.503800 ATGCATGGACTCAGCATGTAT 57.496 42.857 0.00 0.00 46.34 2.29
5923 9782 3.896854 ATGCATGGACTCAGCATGT 57.103 47.368 0.00 0.00 46.34 3.21
5926 9785 1.913778 ACAAATGCATGGACTCAGCA 58.086 45.000 0.00 0.00 43.14 4.41
5927 9786 2.029649 ACAACAAATGCATGGACTCAGC 60.030 45.455 0.00 0.00 0.00 4.26
5928 9787 3.928727 ACAACAAATGCATGGACTCAG 57.071 42.857 0.00 0.00 0.00 3.35
5929 9788 3.384146 ACAACAACAAATGCATGGACTCA 59.616 39.130 0.00 0.00 0.00 3.41
5930 9789 3.981211 ACAACAACAAATGCATGGACTC 58.019 40.909 0.00 0.00 0.00 3.36
5931 9790 4.405116 AACAACAACAAATGCATGGACT 57.595 36.364 0.00 0.00 0.00 3.85
5932 9791 4.260702 CCAAACAACAACAAATGCATGGAC 60.261 41.667 0.00 0.00 30.96 4.02
5933 9792 3.875727 CCAAACAACAACAAATGCATGGA 59.124 39.130 0.00 0.00 30.96 3.41
5934 9793 3.548415 GCCAAACAACAACAAATGCATGG 60.548 43.478 0.00 0.00 0.00 3.66
5935 9794 3.064958 TGCCAAACAACAACAAATGCATG 59.935 39.130 0.00 0.00 0.00 4.06
5936 9795 3.276857 TGCCAAACAACAACAAATGCAT 58.723 36.364 0.00 0.00 0.00 3.96
5937 9796 2.676839 CTGCCAAACAACAACAAATGCA 59.323 40.909 0.00 0.00 0.00 3.96
5938 9797 2.539344 GCTGCCAAACAACAACAAATGC 60.539 45.455 0.00 0.00 0.00 3.56
5939 9798 2.285718 CGCTGCCAAACAACAACAAATG 60.286 45.455 0.00 0.00 0.00 2.32
5940 9799 1.932511 CGCTGCCAAACAACAACAAAT 59.067 42.857 0.00 0.00 0.00 2.32
5941 9800 1.354040 CGCTGCCAAACAACAACAAA 58.646 45.000 0.00 0.00 0.00 2.83
5942 9801 0.459237 CCGCTGCCAAACAACAACAA 60.459 50.000 0.00 0.00 0.00 2.83
5943 9802 1.140589 CCGCTGCCAAACAACAACA 59.859 52.632 0.00 0.00 0.00 3.33
5944 9803 1.140804 ACCGCTGCCAAACAACAAC 59.859 52.632 0.00 0.00 0.00 3.32
5945 9804 1.140589 CACCGCTGCCAAACAACAA 59.859 52.632 0.00 0.00 0.00 2.83
5946 9805 0.748367 TACACCGCTGCCAAACAACA 60.748 50.000 0.00 0.00 0.00 3.33
5947 9806 0.596082 ATACACCGCTGCCAAACAAC 59.404 50.000 0.00 0.00 0.00 3.32
5948 9807 0.595588 CATACACCGCTGCCAAACAA 59.404 50.000 0.00 0.00 0.00 2.83
5949 9808 1.861542 GCATACACCGCTGCCAAACA 61.862 55.000 0.00 0.00 32.15 2.83
5950 9809 1.154035 GCATACACCGCTGCCAAAC 60.154 57.895 0.00 0.00 32.15 2.93
5951 9810 2.685829 CGCATACACCGCTGCCAAA 61.686 57.895 0.00 0.00 34.89 3.28
5952 9811 3.124270 CGCATACACCGCTGCCAA 61.124 61.111 0.00 0.00 34.89 4.52
5959 9818 3.693245 GTCTCAGCGCATACACCG 58.307 61.111 11.47 0.00 0.00 4.94


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.