Multiple sequence alignment - TraesCS5D01G019800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G019800 chr5D 100.000 3805 0 0 2615 6419 12598180 12601984 0.000000e+00 7027.0
1 TraesCS5D01G019800 chr5D 100.000 2287 0 0 1 2287 12595566 12597852 0.000000e+00 4224.0
2 TraesCS5D01G019800 chr5D 87.527 1844 173 36 2796 4610 12925552 12927367 0.000000e+00 2078.0
3 TraesCS5D01G019800 chr5D 82.130 554 77 16 4650 5192 12927445 12927987 7.590000e-124 455.0
4 TraesCS5D01G019800 chr5D 85.652 230 17 11 920 1145 12923519 12923736 1.800000e-55 228.0
5 TraesCS5D01G019800 chr5D 79.661 295 17 20 5323 5579 12928192 12928481 8.560000e-39 172.0
6 TraesCS5D01G019800 chr5B 89.880 3093 221 49 2615 5674 12327385 12324352 0.000000e+00 3893.0
7 TraesCS5D01G019800 chr5B 86.776 1830 175 40 2796 4596 12263391 12261600 0.000000e+00 1977.0
8 TraesCS5D01G019800 chr5B 91.202 682 41 10 1619 2287 12328089 12327414 0.000000e+00 909.0
9 TraesCS5D01G019800 chr5B 80.801 1073 98 56 488 1531 12329121 12328128 0.000000e+00 741.0
10 TraesCS5D01G019800 chr5B 84.110 472 57 15 4671 5132 12261512 12261049 2.120000e-119 440.0
11 TraesCS5D01G019800 chr5B 86.982 338 16 13 159 470 12330366 12330031 7.920000e-94 355.0
12 TraesCS5D01G019800 chr5B 88.339 283 28 2 6137 6419 12323291 12323014 1.030000e-87 335.0
13 TraesCS5D01G019800 chr5B 98.780 82 1 0 1 82 12330543 12330462 5.190000e-31 147.0
14 TraesCS5D01G019800 chr5B 75.419 358 56 18 6020 6368 515380240 515380574 1.870000e-30 145.0
15 TraesCS5D01G019800 chr5B 95.062 81 4 0 5715 5795 12324351 12324271 1.880000e-25 128.0
16 TraesCS5D01G019800 chr5B 85.981 107 8 3 6032 6131 12323623 12323517 2.450000e-19 108.0
17 TraesCS5D01G019800 chr5A 86.285 1852 191 34 2796 4616 9832299 9834118 0.000000e+00 1954.0
18 TraesCS5D01G019800 chr5A 91.713 1074 68 11 2713 3785 9657046 9658099 0.000000e+00 1471.0
19 TraesCS5D01G019800 chr5A 90.409 1126 84 16 3835 4956 9658115 9659220 0.000000e+00 1459.0
20 TraesCS5D01G019800 chr5A 89.148 728 53 15 5020 5725 9659267 9659990 0.000000e+00 883.0
21 TraesCS5D01G019800 chr5A 91.928 607 34 10 1652 2250 9656210 9656809 0.000000e+00 835.0
22 TraesCS5D01G019800 chr5A 82.143 560 80 15 4650 5198 9834191 9834741 4.530000e-126 462.0
23 TraesCS5D01G019800 chr5A 77.425 567 57 31 162 715 9654536 9655044 8.200000e-69 272.0
24 TraesCS5D01G019800 chr5A 78.218 404 32 29 773 1167 9655059 9655415 2.350000e-49 207.0
25 TraesCS5D01G019800 chr5A 80.903 288 15 19 5323 5579 9834934 9835212 2.360000e-44 191.0
26 TraesCS5D01G019800 chr5A 88.435 147 8 2 1 138 9654332 9654478 1.110000e-37 169.0
27 TraesCS5D01G019800 chr5A 74.194 310 60 10 6063 6368 540261592 540261885 1.890000e-20 111.0
28 TraesCS5D01G019800 chr6B 82.536 418 50 15 4102 4517 444305768 444305372 4.760000e-91 346.0
29 TraesCS5D01G019800 chr6B 83.828 303 35 9 3718 4016 444306055 444305763 6.340000e-70 276.0
30 TraesCS5D01G019800 chr6B 78.528 326 56 8 6050 6371 164395319 164395634 1.090000e-47 202.0
31 TraesCS5D01G019800 chr6D 82.185 421 55 13 4100 4517 283456165 283455762 1.710000e-90 344.0
32 TraesCS5D01G019800 chr6D 92.929 99 6 1 3918 4016 283456255 283456158 6.710000e-30 143.0
33 TraesCS5D01G019800 chr6D 83.459 133 14 4 3718 3850 283456405 283456281 4.070000e-22 117.0
34 TraesCS5D01G019800 chr2D 89.219 269 21 6 1740 2006 250922287 250922025 4.800000e-86 329.0
35 TraesCS5D01G019800 chr2D 88.848 269 22 6 1740 2006 629237878 629237616 2.230000e-84 324.0
36 TraesCS5D01G019800 chr2D 88.476 269 23 6 1740 2006 487755159 487755421 1.040000e-82 318.0
37 TraesCS5D01G019800 chr3D 88.848 269 22 6 1740 2006 257151427 257151165 2.230000e-84 324.0
38 TraesCS5D01G019800 chr1D 88.476 269 23 6 1740 2006 949054 949316 1.040000e-82 318.0
39 TraesCS5D01G019800 chr1D 79.083 349 36 19 931 1262 493261676 493261348 8.440000e-49 206.0
40 TraesCS5D01G019800 chr7D 88.679 265 22 6 1744 2006 624547444 624547186 3.740000e-82 316.0
41 TraesCS5D01G019800 chr7D 88.433 268 23 6 1741 2006 624689569 624689308 3.740000e-82 316.0
42 TraesCS5D01G019800 chr7D 78.409 352 62 8 6029 6372 68806900 68807245 3.900000e-52 217.0
43 TraesCS5D01G019800 chr7D 77.032 283 56 5 6067 6345 615940000 615940277 3.100000e-33 154.0
44 TraesCS5D01G019800 chr4A 77.004 474 51 28 420 870 730991270 730991708 1.080000e-52 219.0
45 TraesCS5D01G019800 chr4A 92.063 63 1 2 274 332 730991154 730991216 1.150000e-12 86.1
46 TraesCS5D01G019800 chr4A 100.000 36 0 0 47 82 730990987 730991022 4.150000e-07 67.6
47 TraesCS5D01G019800 chr4B 87.931 174 19 2 972 1145 320751587 320751758 3.030000e-48 204.0
48 TraesCS5D01G019800 chr3A 87.356 174 19 3 972 1145 33531639 33531469 5.080000e-46 196.0
49 TraesCS5D01G019800 chr3A 86.782 174 19 3 972 1145 738883333 738883502 2.360000e-44 191.0
50 TraesCS5D01G019800 chr2A 87.356 174 19 3 972 1145 21602937 21602767 5.080000e-46 196.0
51 TraesCS5D01G019800 chr2A 76.487 353 60 15 6029 6371 42338903 42338564 3.080000e-38 171.0
52 TraesCS5D01G019800 chr2A 77.674 215 42 4 6135 6349 22247472 22247680 6.760000e-25 126.0
53 TraesCS5D01G019800 chr6A 86.932 176 19 3 970 1145 72732047 72731876 1.830000e-45 195.0
54 TraesCS5D01G019800 chr1A 86.782 174 20 3 972 1145 561069409 561069239 2.360000e-44 191.0
55 TraesCS5D01G019800 chr7B 77.778 261 50 5 6085 6345 709045861 709046113 3.100000e-33 154.0
56 TraesCS5D01G019800 chr7B 92.405 79 5 1 1680 1757 659009352 659009430 1.890000e-20 111.0
57 TraesCS5D01G019800 chrUn 94.667 75 3 1 5322 5395 15452699 15452625 1.460000e-21 115.0
58 TraesCS5D01G019800 chrUn 94.667 75 3 1 5322 5395 343925971 343925897 1.460000e-21 115.0
59 TraesCS5D01G019800 chrUn 94.667 75 3 1 5322 5395 343930855 343930781 1.460000e-21 115.0
60 TraesCS5D01G019800 chrUn 94.667 75 3 1 5322 5395 367905529 367905455 1.460000e-21 115.0
61 TraesCS5D01G019800 chrUn 94.667 75 3 1 5322 5395 439242410 439242484 1.460000e-21 115.0
62 TraesCS5D01G019800 chr7A 88.636 88 10 0 4100 4187 41440534 41440447 2.450000e-19 108.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G019800 chr5D 12595566 12601984 6418 False 5625.500000 7027 100.000000 1 6419 2 chr5D.!!$F1 6418
1 TraesCS5D01G019800 chr5D 12923519 12928481 4962 False 733.250000 2078 83.742500 920 5579 4 chr5D.!!$F2 4659
2 TraesCS5D01G019800 chr5B 12261049 12263391 2342 True 1208.500000 1977 85.443000 2796 5132 2 chr5B.!!$R1 2336
3 TraesCS5D01G019800 chr5B 12323014 12330543 7529 True 827.000000 3893 89.628375 1 6419 8 chr5B.!!$R2 6418
4 TraesCS5D01G019800 chr5A 9832299 9835212 2913 False 869.000000 1954 83.110333 2796 5579 3 chr5A.!!$F3 2783
5 TraesCS5D01G019800 chr5A 9654332 9659990 5658 False 756.571429 1471 86.753714 1 5725 7 chr5A.!!$F2 5724
6 TraesCS5D01G019800 chr6B 444305372 444306055 683 True 311.000000 346 83.182000 3718 4517 2 chr6B.!!$R1 799
7 TraesCS5D01G019800 chr6D 283455762 283456405 643 True 201.333333 344 86.191000 3718 4517 3 chr6D.!!$R1 799

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
338 395 0.243095 CTTTTGCTTCCTGCCTGCTC 59.757 55.0 0.00 0.0 42.00 4.26 F
1283 2308 0.247736 CAGCAGAGCGTAGGGTTTCT 59.752 55.0 0.00 0.0 0.00 2.52 F
1615 3023 0.250553 CCTTGTGGTTTGGCGTCCTA 60.251 55.0 0.00 0.0 0.00 2.94 F
2168 4123 0.464373 ATGTTCCCTGCGGCTGTATG 60.464 55.0 0.00 0.0 0.00 2.39 F
2269 4225 1.028868 GTTCCCTGTCTCTGCATGGC 61.029 60.0 0.00 0.0 0.00 4.40 F
2270 4226 1.491274 TTCCCTGTCTCTGCATGGCA 61.491 55.0 0.00 0.0 36.92 4.92 F
3819 5814 0.319297 CTGCAGTTCCTTGCTTTGGC 60.319 55.0 5.25 0.0 44.38 4.52 F
4360 6367 0.037697 TTGTGTCGATTGAGGACCCG 60.038 55.0 0.00 0.0 33.46 5.28 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1600 3008 0.034337 TCACTAGGACGCCAAACCAC 59.966 55.000 0.00 0.00 0.00 4.16 R
2154 4109 1.806623 GTAAGTCATACAGCCGCAGGG 60.807 57.143 0.00 0.00 40.73 4.45 R
3477 5462 0.310543 TGCGGAAACAACATGACAGC 59.689 50.000 0.00 0.00 0.00 4.40 R
3799 5794 1.035139 CCAAAGCAAGGAACTGCAGT 58.965 50.000 15.25 15.25 40.86 4.40 R
3818 5813 1.202510 TGTCAAAACACCAAGGCATGC 60.203 47.619 9.90 9.90 0.00 4.06 R
3942 5941 1.203440 AGGCCCTCCTTGTTCTCCTAA 60.203 52.381 0.00 0.00 40.66 2.69 R
5297 7465 0.165944 CCGTTAGTTTGGCTTCGCAG 59.834 55.000 0.00 0.00 0.00 5.18 R
6030 8720 0.032540 GTCCAGGCTTTTGTGGCAAG 59.967 55.000 0.00 0.00 33.43 4.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
89 90 0.607112 TTGAGAGGTCTGCAGCTGAG 59.393 55.000 20.43 12.20 0.00 3.35
90 91 1.153588 GAGAGGTCTGCAGCTGAGC 60.154 63.158 20.43 20.58 0.00 4.26
91 92 1.886253 GAGAGGTCTGCAGCTGAGCA 61.886 60.000 27.24 8.44 43.35 4.26
139 149 0.749649 TTTGCTTGTGTCGCCCAATT 59.250 45.000 0.00 0.00 0.00 2.32
141 151 1.610363 TGCTTGTGTCGCCCAATTTA 58.390 45.000 0.00 0.00 0.00 1.40
144 154 2.923020 GCTTGTGTCGCCCAATTTAATG 59.077 45.455 0.00 0.00 0.00 1.90
147 157 3.906998 TGTGTCGCCCAATTTAATGTTG 58.093 40.909 0.00 0.00 0.00 3.33
149 159 2.267426 GTCGCCCAATTTAATGTTGCC 58.733 47.619 0.00 0.00 0.00 4.52
151 161 2.564947 TCGCCCAATTTAATGTTGCCTT 59.435 40.909 0.00 0.00 0.00 4.35
152 162 2.672381 CGCCCAATTTAATGTTGCCTTG 59.328 45.455 0.00 0.00 0.00 3.61
153 163 3.673902 GCCCAATTTAATGTTGCCTTGT 58.326 40.909 0.00 0.00 0.00 3.16
154 164 3.684305 GCCCAATTTAATGTTGCCTTGTC 59.316 43.478 0.00 0.00 0.00 3.18
155 165 3.925913 CCCAATTTAATGTTGCCTTGTCG 59.074 43.478 0.00 0.00 0.00 4.35
156 166 3.367630 CCAATTTAATGTTGCCTTGTCGC 59.632 43.478 0.00 0.00 0.00 5.19
224 268 3.706373 ATCCACAAGGGCGTCGCT 61.706 61.111 18.11 0.00 36.21 4.93
255 305 6.581171 ACAAGTGAAGATGGGAAGAAAATC 57.419 37.500 0.00 0.00 0.00 2.17
257 307 5.527026 AGTGAAGATGGGAAGAAAATCCT 57.473 39.130 0.00 0.00 39.57 3.24
258 308 6.642733 AGTGAAGATGGGAAGAAAATCCTA 57.357 37.500 0.00 0.00 39.57 2.94
259 309 6.657875 AGTGAAGATGGGAAGAAAATCCTAG 58.342 40.000 0.00 0.00 39.57 3.02
260 310 5.298026 GTGAAGATGGGAAGAAAATCCTAGC 59.702 44.000 0.00 0.00 39.57 3.42
262 312 4.786425 AGATGGGAAGAAAATCCTAGCAC 58.214 43.478 0.00 0.00 38.67 4.40
263 313 2.985896 TGGGAAGAAAATCCTAGCACG 58.014 47.619 0.00 0.00 39.57 5.34
264 314 1.671328 GGGAAGAAAATCCTAGCACGC 59.329 52.381 0.00 0.00 39.57 5.34
265 315 2.356135 GGAAGAAAATCCTAGCACGCA 58.644 47.619 0.00 0.00 36.50 5.24
266 316 2.352960 GGAAGAAAATCCTAGCACGCAG 59.647 50.000 0.00 0.00 36.50 5.18
284 336 1.065273 GCTCCGTATCTTTCGCCGA 59.935 57.895 0.00 0.00 0.00 5.54
286 338 1.917273 CTCCGTATCTTTCGCCGAAA 58.083 50.000 12.25 12.25 0.00 3.46
287 339 2.470821 CTCCGTATCTTTCGCCGAAAT 58.529 47.619 13.29 1.62 30.85 2.17
289 341 1.332904 CCGTATCTTTCGCCGAAATGC 60.333 52.381 13.29 2.04 30.85 3.56
290 342 1.593006 CGTATCTTTCGCCGAAATGCT 59.407 47.619 13.29 3.60 30.85 3.79
291 343 2.347661 CGTATCTTTCGCCGAAATGCTC 60.348 50.000 13.29 4.19 30.85 4.26
292 344 1.017387 ATCTTTCGCCGAAATGCTCC 58.983 50.000 13.29 0.00 30.85 4.70
293 345 0.321210 TCTTTCGCCGAAATGCTCCA 60.321 50.000 13.29 0.00 30.85 3.86
294 346 0.521291 CTTTCGCCGAAATGCTCCAA 59.479 50.000 13.29 0.00 30.85 3.53
295 347 0.521291 TTTCGCCGAAATGCTCCAAG 59.479 50.000 8.43 0.00 0.00 3.61
296 348 1.305219 TTCGCCGAAATGCTCCAAGG 61.305 55.000 0.00 0.00 0.00 3.61
336 393 1.291272 CCTTTTGCTTCCTGCCTGC 59.709 57.895 0.00 0.00 42.00 4.85
337 394 1.183676 CCTTTTGCTTCCTGCCTGCT 61.184 55.000 0.00 0.00 42.00 4.24
338 395 0.243095 CTTTTGCTTCCTGCCTGCTC 59.757 55.000 0.00 0.00 42.00 4.26
358 423 2.360475 GCCTGGGAGCAACAGTCC 60.360 66.667 0.00 0.00 34.16 3.85
392 457 7.047891 TGTGATGTAAATCTCCCTGTCATAAC 58.952 38.462 0.00 0.00 0.00 1.89
395 460 8.274322 TGATGTAAATCTCCCTGTCATAACAAT 58.726 33.333 0.00 0.00 34.24 2.71
396 461 9.778741 GATGTAAATCTCCCTGTCATAACAATA 57.221 33.333 0.00 0.00 34.24 1.90
449 518 1.741706 CCGGTATATACGATGCGGACT 59.258 52.381 18.20 0.00 31.72 3.85
477 546 8.025243 CCGATGTTTACGGCTGTATAATAAAT 57.975 34.615 6.15 0.00 43.74 1.40
552 1528 3.420839 ACAAAAGTTCAAGTTGGCTCG 57.579 42.857 2.34 0.00 0.00 5.03
567 1545 1.086696 GCTCGCTCTTGTGCCATTTA 58.913 50.000 0.00 0.00 0.00 1.40
625 1606 1.303236 CCCAATGGGCAGACGACAA 60.303 57.895 4.89 0.00 35.35 3.18
643 1624 1.134280 CAAGTGTCCCCATCAGCCTAG 60.134 57.143 0.00 0.00 0.00 3.02
648 1629 2.773918 CCCATCAGCCTAGCCCCA 60.774 66.667 0.00 0.00 0.00 4.96
714 1700 0.798776 CAGTTGTTCCATCTCCGTGC 59.201 55.000 0.00 0.00 0.00 5.34
822 1813 2.540769 CCGTGTGCTCGTCAAAAACAAT 60.541 45.455 0.00 0.00 0.00 2.71
823 1814 3.303461 CCGTGTGCTCGTCAAAAACAATA 60.303 43.478 0.00 0.00 0.00 1.90
916 1919 4.060038 ACCCGTACAGCGAACCCG 62.060 66.667 0.00 0.00 44.77 5.28
941 1944 2.128853 CTCTCGCTCTCCGCTCCATC 62.129 65.000 0.00 0.00 36.73 3.51
942 1945 2.124109 TCGCTCTCCGCTCCATCT 60.124 61.111 0.00 0.00 36.73 2.90
944 1947 2.420890 GCTCTCCGCTCCATCTGG 59.579 66.667 0.00 0.00 35.14 3.86
946 1949 1.739049 CTCTCCGCTCCATCTGGTC 59.261 63.158 0.00 0.00 36.34 4.02
950 1953 2.502492 CCGCTCCATCTGGTCCGAT 61.502 63.158 11.05 0.00 36.34 4.18
951 1954 1.443407 CGCTCCATCTGGTCCGATT 59.557 57.895 0.00 0.00 36.34 3.34
952 1955 0.598680 CGCTCCATCTGGTCCGATTC 60.599 60.000 0.00 0.00 36.34 2.52
953 1956 0.598680 GCTCCATCTGGTCCGATTCG 60.599 60.000 0.00 0.00 36.34 3.34
1141 2166 1.586564 CCGGTTCGACTCGATCTGC 60.587 63.158 11.42 0.30 35.23 4.26
1150 2175 1.602851 GACTCGATCTGCTAGCGGTAA 59.397 52.381 22.76 5.37 37.65 2.85
1164 2189 2.588034 GTAAGGGGTGCCGCGATC 60.588 66.667 8.23 0.00 0.00 3.69
1165 2190 4.215742 TAAGGGGTGCCGCGATCG 62.216 66.667 11.69 11.69 0.00 3.69
1216 2241 1.442017 GGCTTTTTCGATTGCGCGT 60.442 52.632 8.43 0.00 37.46 6.01
1283 2308 0.247736 CAGCAGAGCGTAGGGTTTCT 59.752 55.000 0.00 0.00 0.00 2.52
1287 2312 0.526662 AGAGCGTAGGGTTTCTGACG 59.473 55.000 0.00 0.00 38.32 4.35
1288 2313 0.458025 GAGCGTAGGGTTTCTGACGG 60.458 60.000 0.00 0.00 35.87 4.79
1289 2314 0.896940 AGCGTAGGGTTTCTGACGGA 60.897 55.000 0.00 0.00 35.87 4.69
1290 2315 0.735287 GCGTAGGGTTTCTGACGGAC 60.735 60.000 0.00 0.00 35.87 4.79
1333 2711 1.785353 TTTGGGTAGGTGGGTGAGCC 61.785 60.000 0.00 0.00 0.00 4.70
1336 2714 1.612442 GGTAGGTGGGTGAGCCTGA 60.612 63.158 1.06 0.00 36.38 3.86
1337 2715 1.617947 GGTAGGTGGGTGAGCCTGAG 61.618 65.000 1.06 0.00 36.38 3.35
1338 2716 1.990060 TAGGTGGGTGAGCCTGAGC 60.990 63.158 1.06 0.00 36.38 4.26
1339 2717 4.416738 GGTGGGTGAGCCTGAGCC 62.417 72.222 1.06 0.00 41.25 4.70
1341 2719 3.324930 TGGGTGAGCCTGAGCCAG 61.325 66.667 0.00 0.00 41.25 4.85
1342 2720 4.792804 GGGTGAGCCTGAGCCAGC 62.793 72.222 0.00 0.00 41.25 4.85
1343 2721 4.025858 GGTGAGCCTGAGCCAGCA 62.026 66.667 0.00 0.00 41.25 4.41
1367 2745 4.688770 TTTTTGAGTTGGGCGGGT 57.311 50.000 0.00 0.00 0.00 5.28
1368 2746 2.903404 TTTTTGAGTTGGGCGGGTT 58.097 47.368 0.00 0.00 0.00 4.11
1369 2747 0.461961 TTTTTGAGTTGGGCGGGTTG 59.538 50.000 0.00 0.00 0.00 3.77
1370 2748 1.395826 TTTTGAGTTGGGCGGGTTGG 61.396 55.000 0.00 0.00 0.00 3.77
1371 2749 3.801068 TTGAGTTGGGCGGGTTGGG 62.801 63.158 0.00 0.00 0.00 4.12
1373 2751 3.802852 GAGTTGGGCGGGTTGGGTT 62.803 63.158 0.00 0.00 0.00 4.11
1374 2752 2.115695 GTTGGGCGGGTTGGGTTA 59.884 61.111 0.00 0.00 0.00 2.85
1375 2753 1.304630 GTTGGGCGGGTTGGGTTAT 60.305 57.895 0.00 0.00 0.00 1.89
1377 2755 3.144871 GGGCGGGTTGGGTTATGC 61.145 66.667 0.00 0.00 0.00 3.14
1386 2780 3.139077 GGTTGGGTTATGCTAGATTCGG 58.861 50.000 0.00 0.00 0.00 4.30
1387 2781 2.543777 TGGGTTATGCTAGATTCGGC 57.456 50.000 0.00 0.00 0.00 5.54
1389 2783 0.790814 GGTTATGCTAGATTCGGCGC 59.209 55.000 0.00 0.00 0.00 6.53
1438 2832 1.982223 GCGCGTGCAATTTTCATGTTA 59.018 42.857 17.66 0.00 42.15 2.41
1453 2847 3.054875 TCATGTTAGCCTGCTTGTCATCT 60.055 43.478 0.00 0.00 0.00 2.90
1464 2868 6.458210 CCTGCTTGTCATCTATTTTTGGTTT 58.542 36.000 0.00 0.00 0.00 3.27
1484 2888 3.337694 TTATCCACGGATCGGTTTGTT 57.662 42.857 0.73 0.00 36.17 2.83
1485 2889 2.194201 ATCCACGGATCGGTTTGTTT 57.806 45.000 2.68 0.00 0.00 2.83
1501 2905 2.506444 TGTTTGTCATGCTCATGCTCA 58.494 42.857 5.04 4.69 38.65 4.26
1509 2913 1.241165 TGCTCATGCTCAGTTTGTGG 58.759 50.000 0.00 0.00 40.48 4.17
1515 2919 1.024271 TGCTCAGTTTGTGGTTGCTC 58.976 50.000 0.00 0.00 0.00 4.26
1519 2923 3.675775 GCTCAGTTTGTGGTTGCTCAAAA 60.676 43.478 0.00 0.00 35.73 2.44
1552 2956 0.591659 GGAAAAGCCCGATTATCGCC 59.408 55.000 9.34 2.40 38.82 5.54
1561 2965 0.939577 CGATTATCGCCGTCCACCTG 60.940 60.000 0.46 0.00 31.14 4.00
1562 2966 0.600255 GATTATCGCCGTCCACCTGG 60.600 60.000 0.00 0.00 0.00 4.45
1569 2973 4.415150 CGTCCACCTGGCTGCCAT 62.415 66.667 23.64 5.18 30.82 4.40
1570 2974 2.998097 GTCCACCTGGCTGCCATA 59.002 61.111 23.64 0.00 30.82 2.74
1571 2975 1.153086 GTCCACCTGGCTGCCATAG 60.153 63.158 23.64 18.71 30.82 2.23
1572 2976 1.616327 TCCACCTGGCTGCCATAGT 60.616 57.895 23.64 19.39 30.82 2.12
1573 2977 1.452651 CCACCTGGCTGCCATAGTG 60.453 63.158 30.54 30.54 37.40 2.74
1574 2978 1.300963 CACCTGGCTGCCATAGTGT 59.699 57.895 29.74 19.72 34.80 3.55
1575 2979 0.745845 CACCTGGCTGCCATAGTGTC 60.746 60.000 29.74 3.19 34.80 3.67
1576 2980 0.911525 ACCTGGCTGCCATAGTGTCT 60.912 55.000 23.64 0.00 30.82 3.41
1577 2981 1.123077 CCTGGCTGCCATAGTGTCTA 58.877 55.000 23.64 0.00 30.82 2.59
1580 2984 2.103771 CTGGCTGCCATAGTGTCTATGT 59.896 50.000 23.64 0.00 30.82 2.29
1581 2985 3.304829 TGGCTGCCATAGTGTCTATGTA 58.695 45.455 19.30 0.00 0.00 2.29
1582 2986 3.321968 TGGCTGCCATAGTGTCTATGTAG 59.678 47.826 19.30 11.99 0.00 2.74
1583 2987 3.321497 GCTGCCATAGTGTCTATGTAGC 58.679 50.000 18.10 18.10 0.00 3.58
1584 2988 3.006323 GCTGCCATAGTGTCTATGTAGCT 59.994 47.826 21.72 0.00 33.89 3.32
1591 2999 8.740906 GCCATAGTGTCTATGTAGCTTATCTTA 58.259 37.037 13.41 0.00 0.00 2.10
1609 3017 6.715347 ATCTTATAATCCTTGTGGTTTGGC 57.285 37.500 0.00 0.00 34.23 4.52
1615 3023 0.250553 CCTTGTGGTTTGGCGTCCTA 60.251 55.000 0.00 0.00 0.00 2.94
1640 3069 4.746115 TGATGCTCTGATTTTGTTGTTTGC 59.254 37.500 0.00 0.00 0.00 3.68
1648 3125 2.270275 TTTGTTGTTTGCTGTGACGG 57.730 45.000 0.00 0.00 0.00 4.79
1669 3499 4.201851 CGGAAATGTAAGATGAGGTTGCTG 60.202 45.833 0.00 0.00 0.00 4.41
1678 3508 2.533266 TGAGGTTGCTGACTTCACTC 57.467 50.000 2.38 0.00 39.20 3.51
1681 3511 2.805099 GAGGTTGCTGACTTCACTCTTG 59.195 50.000 0.00 0.00 34.67 3.02
1683 3513 2.945668 GGTTGCTGACTTCACTCTTGTT 59.054 45.455 0.00 0.00 0.00 2.83
1684 3514 3.242870 GGTTGCTGACTTCACTCTTGTTG 60.243 47.826 0.00 0.00 0.00 3.33
1771 3601 3.244181 GCATCAACTGGTGGGTCATTTTT 60.244 43.478 0.00 0.00 0.00 1.94
1772 3602 4.309099 CATCAACTGGTGGGTCATTTTTG 58.691 43.478 0.00 0.00 0.00 2.44
1778 3610 5.852827 ACTGGTGGGTCATTTTTGTTATTG 58.147 37.500 0.00 0.00 0.00 1.90
1784 3616 5.931146 TGGGTCATTTTTGTTATTGCATCAC 59.069 36.000 0.00 0.00 0.00 3.06
1996 3857 5.127491 TCCAAGGTTTACATTCGTTTGACT 58.873 37.500 0.00 0.00 0.00 3.41
2040 3901 3.764885 AATCTATGTTGCGGTTCTTGC 57.235 42.857 0.00 0.00 0.00 4.01
2090 3953 7.285566 ACTCACATTCTGTAAATCTATGCCAT 58.714 34.615 0.00 0.00 0.00 4.40
2160 4115 1.213537 CCAAGCAATGTTCCCTGCG 59.786 57.895 0.00 0.00 43.51 5.18
2168 4123 0.464373 ATGTTCCCTGCGGCTGTATG 60.464 55.000 0.00 0.00 0.00 2.39
2269 4225 1.028868 GTTCCCTGTCTCTGCATGGC 61.029 60.000 0.00 0.00 0.00 4.40
2270 4226 1.491274 TTCCCTGTCTCTGCATGGCA 61.491 55.000 0.00 0.00 36.92 4.92
2706 4667 2.485479 CGGGGGATCATTTAGTGGACTG 60.485 54.545 0.00 0.00 0.00 3.51
2728 4693 6.828273 ACTGTAGAATAACTGCATTTATGGCA 59.172 34.615 9.80 0.00 40.17 4.92
2793 4758 9.325198 CTACTGCAGTTGACATTATATTACCAA 57.675 33.333 27.06 0.00 0.00 3.67
2794 4759 7.985476 ACTGCAGTTGACATTATATTACCAAC 58.015 34.615 15.25 0.00 35.46 3.77
3104 5081 8.934023 ACCCATGATGACTTTTACTTTTAGAA 57.066 30.769 0.00 0.00 0.00 2.10
3316 5299 5.534654 TGTGTTTGCTTTTAGCTATCCTGTT 59.465 36.000 0.00 0.00 42.97 3.16
3475 5460 5.645067 TGCTCTGAACTAAGATTTCCACATG 59.355 40.000 0.00 0.00 0.00 3.21
3477 5462 6.402983 GCTCTGAACTAAGATTTCCACATGTG 60.403 42.308 19.31 19.31 0.00 3.21
3478 5463 5.412594 TCTGAACTAAGATTTCCACATGTGC 59.587 40.000 20.81 6.31 0.00 4.57
3560 5548 3.973472 TGATCCTTCCTACTGGAGCTA 57.027 47.619 0.00 0.00 44.24 3.32
3777 5772 7.775053 TTTGCTCCTAACATTCAGGTATTTT 57.225 32.000 0.00 0.00 34.56 1.82
3781 5776 6.603599 GCTCCTAACATTCAGGTATTTTCCTT 59.396 38.462 0.00 0.00 35.37 3.36
3782 5777 7.415653 GCTCCTAACATTCAGGTATTTTCCTTG 60.416 40.741 0.00 0.00 35.37 3.61
3784 5779 7.947890 TCCTAACATTCAGGTATTTTCCTTGTT 59.052 33.333 0.00 0.00 38.65 2.83
3787 5782 8.887036 AACATTCAGGTATTTTCCTTGTTTTC 57.113 30.769 0.00 0.00 34.42 2.29
3788 5783 8.250143 ACATTCAGGTATTTTCCTTGTTTTCT 57.750 30.769 0.00 0.00 35.37 2.52
3789 5784 8.704668 ACATTCAGGTATTTTCCTTGTTTTCTT 58.295 29.630 0.00 0.00 35.37 2.52
3792 5787 8.404107 TCAGGTATTTTCCTTGTTTTCTTAGG 57.596 34.615 0.00 0.00 35.37 2.69
3801 5796 8.990163 TTCCTTGTTTTCTTAGGTTATGAACT 57.010 30.769 0.00 0.00 0.00 3.01
3803 5798 7.040686 TCCTTGTTTTCTTAGGTTATGAACTGC 60.041 37.037 0.00 0.00 0.00 4.40
3804 5799 7.255451 CCTTGTTTTCTTAGGTTATGAACTGCA 60.255 37.037 0.00 0.00 0.00 4.41
3805 5800 7.202016 TGTTTTCTTAGGTTATGAACTGCAG 57.798 36.000 13.48 13.48 0.00 4.41
3818 5813 1.035139 ACTGCAGTTCCTTGCTTTGG 58.965 50.000 15.25 0.00 44.38 3.28
3819 5814 0.319297 CTGCAGTTCCTTGCTTTGGC 60.319 55.000 5.25 0.00 44.38 4.52
3844 5839 0.459489 TTGGTGTTTTGACAGCAGCC 59.541 50.000 10.72 0.00 46.70 4.85
3912 5911 3.981071 TTGAGAGTCAATGTAGGGTGG 57.019 47.619 0.00 0.00 30.26 4.61
3915 5914 2.838202 GAGAGTCAATGTAGGGTGGGAA 59.162 50.000 0.00 0.00 0.00 3.97
3923 5922 4.675063 ATGTAGGGTGGGAATTGAGTTT 57.325 40.909 0.00 0.00 0.00 2.66
3924 5923 3.761897 TGTAGGGTGGGAATTGAGTTTG 58.238 45.455 0.00 0.00 0.00 2.93
3942 5941 9.495572 TTGAGTTTGTTTTGTTTTCTGGTATTT 57.504 25.926 0.00 0.00 0.00 1.40
4026 6025 3.492011 GCAAGGTTTGTCTGCTTGAATTG 59.508 43.478 0.00 0.00 0.00 2.32
4034 6033 5.618056 TGTCTGCTTGAATTGATCTGTTC 57.382 39.130 0.00 0.00 0.00 3.18
4036 6035 5.766670 TGTCTGCTTGAATTGATCTGTTCTT 59.233 36.000 10.56 0.00 0.00 2.52
4048 6047 3.827008 TCTGTTCTTGTGCACTTCTCT 57.173 42.857 19.41 0.00 0.00 3.10
4051 6050 3.722147 TGTTCTTGTGCACTTCTCTCTC 58.278 45.455 19.41 2.11 0.00 3.20
4065 6065 7.011482 GCACTTCTCTCTCAAGTTTTAGTTTGA 59.989 37.037 0.00 0.00 31.40 2.69
4067 6067 9.103861 ACTTCTCTCTCAAGTTTTAGTTTGAAG 57.896 33.333 0.00 0.00 33.30 3.02
4070 6070 8.421784 TCTCTCTCAAGTTTTAGTTTGAAGCTA 58.578 33.333 0.00 0.00 33.30 3.32
4247 6253 8.246180 TCTCCTTTCATGAGCATTTTTAACATC 58.754 33.333 0.00 0.00 0.00 3.06
4259 6266 6.295292 GCATTTTTAACATCCCCTTCTCTTGT 60.295 38.462 0.00 0.00 0.00 3.16
4360 6367 0.037697 TTGTGTCGATTGAGGACCCG 60.038 55.000 0.00 0.00 33.46 5.28
4478 6487 3.397482 ACTGTGAGTGATTTGCTCTGTC 58.603 45.455 0.00 0.00 34.30 3.51
4589 6602 2.014857 TCATGCAATGCTCTTCTGCTC 58.985 47.619 6.82 0.00 46.21 4.26
4606 6625 8.758829 TCTTCTGCTCAAGGTATTATTCTGTTA 58.241 33.333 0.00 0.00 0.00 2.41
4644 6664 7.359849 GGTTCTTACTCGTTATTTTCCTGTGAC 60.360 40.741 0.00 0.00 0.00 3.67
4649 6669 5.375417 TCGTTATTTTCCTGTGACGAGTA 57.625 39.130 0.00 0.00 34.98 2.59
4653 6673 7.066163 TCGTTATTTTCCTGTGACGAGTATAGA 59.934 37.037 0.00 0.00 34.98 1.98
4691 6744 3.141398 TCTGACTGTTCATCCTTTGCAC 58.859 45.455 0.00 0.00 0.00 4.57
4816 6869 7.126421 ACATGATAGGAGATACTTCCTTGTTGT 59.874 37.037 0.00 0.00 45.35 3.32
4821 6874 3.589988 AGATACTTCCTTGTTGTGCGAG 58.410 45.455 0.00 0.00 0.00 5.03
4968 7030 5.663795 ATCTGCATAGTTAGCATTTGTCG 57.336 39.130 0.00 0.00 41.82 4.35
4991 7054 3.119955 GGGCAATTTTAACGAGACTGGTC 60.120 47.826 0.00 0.00 0.00 4.02
4997 7060 1.990799 TAACGAGACTGGTCGCAATG 58.009 50.000 5.45 0.00 44.06 2.82
5004 7067 2.093500 AGACTGGTCGCAATGCTCATAA 60.093 45.455 2.94 0.00 34.09 1.90
5005 7068 2.677836 GACTGGTCGCAATGCTCATAAA 59.322 45.455 2.94 0.00 0.00 1.40
5006 7069 2.420022 ACTGGTCGCAATGCTCATAAAC 59.580 45.455 2.94 0.00 0.00 2.01
5007 7070 1.742831 TGGTCGCAATGCTCATAAACC 59.257 47.619 2.94 2.16 0.00 3.27
5009 7072 2.423538 GGTCGCAATGCTCATAAACCTT 59.576 45.455 2.94 0.00 0.00 3.50
5010 7073 3.487544 GGTCGCAATGCTCATAAACCTTC 60.488 47.826 2.94 0.00 0.00 3.46
5011 7074 3.375299 GTCGCAATGCTCATAAACCTTCT 59.625 43.478 2.94 0.00 0.00 2.85
5033 7099 2.616842 GGGTGTAACTGACCAGTGTTTG 59.383 50.000 3.13 0.00 41.58 2.93
5036 7102 4.157105 GGTGTAACTGACCAGTGTTTGTTT 59.843 41.667 3.13 0.00 41.58 2.83
5137 7203 6.187727 TCTCCCTGTTTATTCTTGTTCTGT 57.812 37.500 0.00 0.00 0.00 3.41
5178 7244 1.686355 TGTTGGCCAACAGTACCTTG 58.314 50.000 40.89 0.00 45.42 3.61
5212 7365 9.865321 ACAAAAGAAATTTATGTGATCCTCATG 57.135 29.630 9.73 0.00 0.00 3.07
5221 7374 7.713764 TTATGTGATCCTCATGTGTTATTCG 57.286 36.000 9.73 0.00 0.00 3.34
5225 7381 7.100409 TGTGATCCTCATGTGTTATTCGTTTA 58.900 34.615 0.00 0.00 0.00 2.01
5247 7403 8.690840 GTTTATTAAGTGCTGTGTGTTCATTTC 58.309 33.333 0.00 0.00 0.00 2.17
5255 7416 4.149396 GCTGTGTGTTCATTTCTCATTTGC 59.851 41.667 0.00 0.00 0.00 3.68
5259 7420 5.174398 GTGTGTTCATTTCTCATTTGCTGTG 59.826 40.000 0.00 0.00 0.00 3.66
5297 7465 8.939929 TGTCTGATCTTGACAGTATTCATTTTC 58.060 33.333 14.90 0.00 39.23 2.29
5304 7472 6.169419 TGACAGTATTCATTTTCTGCGAAG 57.831 37.500 0.00 0.00 0.00 3.79
5643 7857 3.665745 AGTTTTTGGCGCATCATCTTT 57.334 38.095 10.83 0.00 0.00 2.52
5676 7895 7.147143 TGTGTTAGTTTACTTGTTGCAGAAA 57.853 32.000 0.00 0.00 0.00 2.52
5694 7919 4.215827 CAGAAAGCATGCTTCTGAGAAACT 59.784 41.667 33.38 19.56 35.36 2.66
5697 7922 2.228343 AGCATGCTTCTGAGAAACTTGC 59.772 45.455 21.65 21.65 0.00 4.01
5709 7934 6.319658 TCTGAGAAACTTGCTTTCATCTTTGT 59.680 34.615 0.44 0.00 40.88 2.83
5713 7938 5.723492 AACTTGCTTTCATCTTTGTTTGC 57.277 34.783 0.00 0.00 0.00 3.68
5752 7977 4.821260 GGTTTTCCATTGCCATCTGTTTTT 59.179 37.500 0.00 0.00 40.31 1.94
5762 7987 9.044150 CATTGCCATCTGTTTTTCTTTTAAAGA 57.956 29.630 2.94 2.94 35.26 2.52
5781 8006 5.841957 AAGAAACTTGCTTCTGTTGTCAT 57.158 34.783 0.00 0.00 35.79 3.06
5783 8008 5.585390 AGAAACTTGCTTCTGTTGTCATTG 58.415 37.500 0.00 0.00 34.31 2.82
5795 8020 1.224592 GTCATTGATGGGGCGTCCT 59.775 57.895 5.77 0.00 36.20 3.85
5796 8021 1.097547 GTCATTGATGGGGCGTCCTG 61.098 60.000 5.77 0.00 36.20 3.86
5797 8022 1.825191 CATTGATGGGGCGTCCTGG 60.825 63.158 5.77 0.00 36.20 4.45
5798 8023 2.308722 ATTGATGGGGCGTCCTGGT 61.309 57.895 5.77 0.00 36.20 4.00
5799 8024 1.863155 ATTGATGGGGCGTCCTGGTT 61.863 55.000 5.77 0.00 36.20 3.67
5801 8026 2.933287 ATGGGGCGTCCTGGTTGA 60.933 61.111 5.77 0.00 36.20 3.18
5802 8027 2.270874 GATGGGGCGTCCTGGTTGAT 62.271 60.000 5.77 0.00 36.20 2.57
5803 8028 1.863155 ATGGGGCGTCCTGGTTGATT 61.863 55.000 5.77 0.00 36.20 2.57
5804 8029 2.046285 GGGGCGTCCTGGTTGATTG 61.046 63.158 5.77 0.00 0.00 2.67
5807 8032 1.026718 GGCGTCCTGGTTGATTGGAG 61.027 60.000 0.00 0.00 0.00 3.86
5808 8033 0.036388 GCGTCCTGGTTGATTGGAGA 60.036 55.000 0.00 0.00 0.00 3.71
5809 8034 1.407437 GCGTCCTGGTTGATTGGAGAT 60.407 52.381 0.00 0.00 0.00 2.75
5810 8035 2.283298 CGTCCTGGTTGATTGGAGATG 58.717 52.381 0.00 0.00 0.00 2.90
5811 8036 2.093500 CGTCCTGGTTGATTGGAGATGA 60.093 50.000 0.00 0.00 0.00 2.92
5812 8037 3.539604 GTCCTGGTTGATTGGAGATGAG 58.460 50.000 0.00 0.00 0.00 2.90
5814 8039 4.162320 GTCCTGGTTGATTGGAGATGAGTA 59.838 45.833 0.00 0.00 0.00 2.59
5815 8040 4.162320 TCCTGGTTGATTGGAGATGAGTAC 59.838 45.833 0.00 0.00 0.00 2.73
5816 8041 4.163078 CCTGGTTGATTGGAGATGAGTACT 59.837 45.833 0.00 0.00 0.00 2.73
5818 8043 5.491070 TGGTTGATTGGAGATGAGTACTTG 58.509 41.667 0.00 0.00 0.00 3.16
5820 8045 6.173339 GGTTGATTGGAGATGAGTACTTGAA 58.827 40.000 0.00 0.00 0.00 2.69
5821 8046 6.314896 GGTTGATTGGAGATGAGTACTTGAAG 59.685 42.308 0.00 0.00 0.00 3.02
5822 8047 5.423015 TGATTGGAGATGAGTACTTGAAGC 58.577 41.667 0.00 0.00 0.00 3.86
5824 8049 4.193826 TGGAGATGAGTACTTGAAGCAC 57.806 45.455 0.00 0.00 0.00 4.40
5825 8050 3.182967 GGAGATGAGTACTTGAAGCACG 58.817 50.000 0.00 0.00 0.00 5.34
5826 8051 3.367498 GGAGATGAGTACTTGAAGCACGT 60.367 47.826 0.00 0.00 0.00 4.49
5827 8052 3.839293 AGATGAGTACTTGAAGCACGTC 58.161 45.455 0.00 0.00 0.00 4.34
5829 8054 3.660501 TGAGTACTTGAAGCACGTCAT 57.339 42.857 0.00 0.00 0.00 3.06
5830 8055 3.317150 TGAGTACTTGAAGCACGTCATG 58.683 45.455 0.00 0.00 0.00 3.07
5832 8057 4.177026 GAGTACTTGAAGCACGTCATGAT 58.823 43.478 0.00 0.00 0.00 2.45
5833 8058 4.569943 AGTACTTGAAGCACGTCATGATT 58.430 39.130 0.00 0.00 40.46 2.57
5834 8059 4.997395 AGTACTTGAAGCACGTCATGATTT 59.003 37.500 0.00 0.00 36.94 2.17
5835 8060 4.410492 ACTTGAAGCACGTCATGATTTC 57.590 40.909 0.00 0.00 36.94 2.17
5836 8061 3.120546 ACTTGAAGCACGTCATGATTTCG 60.121 43.478 0.00 0.00 36.94 3.46
5837 8062 1.731709 TGAAGCACGTCATGATTTCGG 59.268 47.619 0.00 0.00 36.94 4.30
5838 8063 1.999735 GAAGCACGTCATGATTTCGGA 59.000 47.619 0.00 0.00 36.94 4.55
5839 8064 1.645034 AGCACGTCATGATTTCGGAG 58.355 50.000 0.00 0.00 0.00 4.63
5840 8065 0.652592 GCACGTCATGATTTCGGAGG 59.347 55.000 0.00 0.00 0.00 4.30
5842 8067 2.346803 CACGTCATGATTTCGGAGGTT 58.653 47.619 0.00 0.00 0.00 3.50
5843 8068 2.742053 CACGTCATGATTTCGGAGGTTT 59.258 45.455 0.00 0.00 0.00 3.27
5844 8069 2.742053 ACGTCATGATTTCGGAGGTTTG 59.258 45.455 0.00 0.00 0.00 2.93
5845 8070 2.476185 CGTCATGATTTCGGAGGTTTGC 60.476 50.000 0.00 0.00 0.00 3.68
5846 8071 2.091541 TCATGATTTCGGAGGTTTGCC 58.908 47.619 0.00 0.00 0.00 4.52
5855 8080 4.809070 AGGTTTGCCTCTGACAGC 57.191 55.556 0.00 0.00 42.67 4.40
5856 8081 1.839191 AGGTTTGCCTCTGACAGCA 59.161 52.632 0.00 0.00 42.67 4.41
5857 8082 0.183492 AGGTTTGCCTCTGACAGCAA 59.817 50.000 6.32 6.32 46.74 3.91
5859 8084 4.047834 TTGCCTCTGACAGCAACG 57.952 55.556 6.32 0.00 43.74 4.10
5860 8085 1.597854 TTGCCTCTGACAGCAACGG 60.598 57.895 6.32 0.00 43.74 4.44
5861 8086 2.038814 TTGCCTCTGACAGCAACGGA 62.039 55.000 6.32 0.00 43.74 4.69
5863 8088 0.674895 GCCTCTGACAGCAACGGATT 60.675 55.000 0.00 0.00 0.00 3.01
5864 8089 1.813513 CCTCTGACAGCAACGGATTT 58.186 50.000 0.00 0.00 0.00 2.17
5866 8091 2.416747 CTCTGACAGCAACGGATTTCA 58.583 47.619 0.00 0.00 0.00 2.69
5867 8092 2.807967 CTCTGACAGCAACGGATTTCAA 59.192 45.455 0.00 0.00 0.00 2.69
5868 8093 2.548057 TCTGACAGCAACGGATTTCAAC 59.452 45.455 0.00 0.00 0.00 3.18
5869 8094 2.549754 CTGACAGCAACGGATTTCAACT 59.450 45.455 0.00 0.00 0.00 3.16
5870 8095 3.734463 TGACAGCAACGGATTTCAACTA 58.266 40.909 0.00 0.00 0.00 2.24
5871 8096 3.745975 TGACAGCAACGGATTTCAACTAG 59.254 43.478 0.00 0.00 0.00 2.57
5872 8097 3.994392 GACAGCAACGGATTTCAACTAGA 59.006 43.478 0.00 0.00 0.00 2.43
5888 8404 5.125739 TCAACTAGAAAAACTGGGCGAAAAA 59.874 36.000 0.00 0.00 0.00 1.94
5889 8405 4.928601 ACTAGAAAAACTGGGCGAAAAAC 58.071 39.130 0.00 0.00 0.00 2.43
5896 8412 2.582052 ACTGGGCGAAAAACAGATTGA 58.418 42.857 0.00 0.00 36.17 2.57
5897 8413 2.955660 ACTGGGCGAAAAACAGATTGAA 59.044 40.909 0.00 0.00 36.17 2.69
5898 8414 3.383185 ACTGGGCGAAAAACAGATTGAAA 59.617 39.130 0.00 0.00 36.17 2.69
5901 8417 3.493129 GGGCGAAAAACAGATTGAAAACC 59.507 43.478 0.00 0.00 0.00 3.27
5903 8419 3.181575 GCGAAAAACAGATTGAAAACCGG 59.818 43.478 0.00 0.00 0.00 5.28
5905 8421 4.368315 GAAAAACAGATTGAAAACCGGCT 58.632 39.130 0.00 0.00 0.00 5.52
5906 8422 3.369546 AAACAGATTGAAAACCGGCTG 57.630 42.857 0.00 0.00 0.00 4.85
5907 8423 2.270352 ACAGATTGAAAACCGGCTGA 57.730 45.000 0.00 0.00 0.00 4.26
5910 8426 3.383185 ACAGATTGAAAACCGGCTGAAAA 59.617 39.130 0.00 0.00 0.00 2.29
5911 8427 3.735746 CAGATTGAAAACCGGCTGAAAAC 59.264 43.478 0.00 0.00 0.00 2.43
5912 8428 2.588027 TTGAAAACCGGCTGAAAACC 57.412 45.000 0.00 0.00 0.00 3.27
5913 8429 1.475403 TGAAAACCGGCTGAAAACCA 58.525 45.000 0.00 0.00 0.00 3.67
5914 8430 2.035632 TGAAAACCGGCTGAAAACCAT 58.964 42.857 0.00 0.00 0.00 3.55
5915 8431 2.035321 TGAAAACCGGCTGAAAACCATC 59.965 45.455 0.00 0.00 0.00 3.51
5916 8432 1.698506 AAACCGGCTGAAAACCATCA 58.301 45.000 0.00 0.00 0.00 3.07
5917 8433 1.923356 AACCGGCTGAAAACCATCAT 58.077 45.000 0.00 0.00 0.00 2.45
5918 8434 2.799126 ACCGGCTGAAAACCATCATA 57.201 45.000 0.00 0.00 0.00 2.15
5919 8435 3.297134 ACCGGCTGAAAACCATCATAT 57.703 42.857 0.00 0.00 0.00 1.78
5920 8436 3.214328 ACCGGCTGAAAACCATCATATC 58.786 45.455 0.00 0.00 0.00 1.63
5921 8437 3.117888 ACCGGCTGAAAACCATCATATCT 60.118 43.478 0.00 0.00 0.00 1.98
5922 8438 3.251729 CCGGCTGAAAACCATCATATCTG 59.748 47.826 0.00 0.00 0.00 2.90
5924 8440 4.576053 CGGCTGAAAACCATCATATCTGAA 59.424 41.667 0.00 0.00 34.37 3.02
5926 8442 5.357878 GGCTGAAAACCATCATATCTGAACA 59.642 40.000 0.00 0.00 34.37 3.18
5928 8444 7.315142 GCTGAAAACCATCATATCTGAACAAA 58.685 34.615 0.00 0.00 34.37 2.83
5929 8445 7.977853 GCTGAAAACCATCATATCTGAACAAAT 59.022 33.333 0.00 0.00 34.37 2.32
5935 8451 8.682936 ACCATCATATCTGAACAAATTACTCC 57.317 34.615 0.00 0.00 34.37 3.85
5936 8452 8.274322 ACCATCATATCTGAACAAATTACTCCA 58.726 33.333 0.00 0.00 34.37 3.86
5937 8453 9.293404 CCATCATATCTGAACAAATTACTCCAT 57.707 33.333 0.00 0.00 34.37 3.41
5941 8457 9.784531 CATATCTGAACAAATTACTCCATAGGT 57.215 33.333 0.00 0.00 0.00 3.08
5942 8458 9.784531 ATATCTGAACAAATTACTCCATAGGTG 57.215 33.333 0.00 0.00 0.00 4.00
5943 8459 7.252612 TCTGAACAAATTACTCCATAGGTGA 57.747 36.000 0.00 0.00 0.00 4.02
5944 8460 7.861629 TCTGAACAAATTACTCCATAGGTGAT 58.138 34.615 0.00 0.00 0.00 3.06
5945 8461 8.328758 TCTGAACAAATTACTCCATAGGTGATT 58.671 33.333 0.00 0.00 0.00 2.57
5946 8462 8.279970 TGAACAAATTACTCCATAGGTGATTG 57.720 34.615 0.00 0.00 0.00 2.67
5947 8463 7.888021 TGAACAAATTACTCCATAGGTGATTGT 59.112 33.333 0.00 0.00 0.00 2.71
5948 8464 7.865706 ACAAATTACTCCATAGGTGATTGTC 57.134 36.000 0.00 0.00 0.00 3.18
5949 8465 6.538742 ACAAATTACTCCATAGGTGATTGTCG 59.461 38.462 0.00 0.00 0.00 4.35
5950 8466 6.479972 AATTACTCCATAGGTGATTGTCGA 57.520 37.500 0.00 0.00 0.00 4.20
5951 8467 5.515797 TTACTCCATAGGTGATTGTCGAG 57.484 43.478 0.00 0.00 0.00 4.04
5952 8468 3.632333 ACTCCATAGGTGATTGTCGAGA 58.368 45.455 0.00 0.00 0.00 4.04
5953 8469 4.219115 ACTCCATAGGTGATTGTCGAGAT 58.781 43.478 0.00 0.00 0.00 2.75
5954 8470 5.386060 ACTCCATAGGTGATTGTCGAGATA 58.614 41.667 0.00 0.00 0.00 1.98
5955 8471 5.833667 ACTCCATAGGTGATTGTCGAGATAA 59.166 40.000 0.00 0.00 0.00 1.75
5956 8472 6.085555 TCCATAGGTGATTGTCGAGATAAC 57.914 41.667 0.00 0.00 0.00 1.89
5957 8473 5.010719 TCCATAGGTGATTGTCGAGATAACC 59.989 44.000 7.03 7.03 0.00 2.85
5958 8474 3.821421 AGGTGATTGTCGAGATAACCC 57.179 47.619 10.40 0.00 29.38 4.11
5959 8475 3.104512 AGGTGATTGTCGAGATAACCCA 58.895 45.455 10.40 0.00 29.38 4.51
5960 8476 3.118738 AGGTGATTGTCGAGATAACCCAC 60.119 47.826 10.40 7.02 29.38 4.61
5961 8477 3.369052 GGTGATTGTCGAGATAACCCACA 60.369 47.826 14.00 0.00 0.00 4.17
5962 8478 4.442706 GTGATTGTCGAGATAACCCACAT 58.557 43.478 0.00 0.00 0.00 3.21
5963 8479 4.876107 GTGATTGTCGAGATAACCCACATT 59.124 41.667 0.00 0.00 0.00 2.71
5964 8480 4.875536 TGATTGTCGAGATAACCCACATTG 59.124 41.667 0.00 0.00 0.00 2.82
5965 8481 3.973206 TGTCGAGATAACCCACATTGT 57.027 42.857 0.00 0.00 0.00 2.71
5966 8482 5.408880 TTGTCGAGATAACCCACATTGTA 57.591 39.130 0.00 0.00 0.00 2.41
5967 8483 5.006153 TGTCGAGATAACCCACATTGTAG 57.994 43.478 0.00 0.00 0.00 2.74
5968 8484 3.802685 GTCGAGATAACCCACATTGTAGC 59.197 47.826 0.00 0.00 0.00 3.58
5969 8485 2.794910 CGAGATAACCCACATTGTAGCG 59.205 50.000 0.00 0.00 0.00 4.26
5970 8486 3.131396 GAGATAACCCACATTGTAGCGG 58.869 50.000 0.00 0.00 0.00 5.52
5971 8487 2.769663 AGATAACCCACATTGTAGCGGA 59.230 45.455 4.28 0.00 0.00 5.54
5972 8488 2.389962 TAACCCACATTGTAGCGGAC 57.610 50.000 4.28 0.00 0.00 4.79
5973 8489 0.672401 AACCCACATTGTAGCGGACG 60.672 55.000 4.28 0.00 0.00 4.79
5974 8490 2.461110 CCCACATTGTAGCGGACGC 61.461 63.158 8.91 8.91 42.33 5.19
5985 8501 2.355363 CGGACGCGTGAAGGTGAA 60.355 61.111 20.70 0.00 0.00 3.18
5986 8502 1.736645 CGGACGCGTGAAGGTGAAT 60.737 57.895 20.70 0.00 0.00 2.57
5987 8503 1.787847 GGACGCGTGAAGGTGAATG 59.212 57.895 20.70 0.00 0.00 2.67
5988 8504 0.669318 GGACGCGTGAAGGTGAATGA 60.669 55.000 20.70 0.00 0.00 2.57
5996 8512 4.161333 CGTGAAGGTGAATGAAAATCTGC 58.839 43.478 0.00 0.00 0.00 4.26
5997 8513 4.320421 CGTGAAGGTGAATGAAAATCTGCA 60.320 41.667 0.00 0.00 0.00 4.41
6005 8521 6.258507 GGTGAATGAAAATCTGCACAAAAACT 59.741 34.615 0.00 0.00 0.00 2.66
6006 8522 7.201635 GGTGAATGAAAATCTGCACAAAAACTT 60.202 33.333 0.00 0.00 0.00 2.66
6013 8529 3.287222 TCTGCACAAAAACTTAGCCACT 58.713 40.909 0.00 0.00 0.00 4.00
6017 8533 3.779759 CACAAAAACTTAGCCACTTGCA 58.220 40.909 0.00 0.00 44.83 4.08
6024 8714 0.184933 TTAGCCACTTGCAACCACCT 59.815 50.000 0.00 0.00 44.83 4.00
6027 8717 1.391157 GCCACTTGCAACCACCTTCA 61.391 55.000 0.00 0.00 40.77 3.02
6028 8718 1.110442 CCACTTGCAACCACCTTCAA 58.890 50.000 0.00 0.00 0.00 2.69
6030 8720 2.288395 CCACTTGCAACCACCTTCAATC 60.288 50.000 0.00 0.00 0.00 2.67
6039 8729 1.962807 CCACCTTCAATCTTGCCACAA 59.037 47.619 0.00 0.00 0.00 3.33
6044 8734 2.818130 TCAATCTTGCCACAAAAGCC 57.182 45.000 0.00 0.00 0.00 4.35
6046 8736 2.036217 TCAATCTTGCCACAAAAGCCTG 59.964 45.455 0.00 0.00 0.00 4.85
6080 8773 0.981183 TAACCATCGGTCCTGCTTGT 59.019 50.000 0.00 0.00 33.12 3.16
6083 8776 1.079819 CATCGGTCCTGCTTGTCGT 60.080 57.895 0.00 0.00 0.00 4.34
6104 8801 0.918310 AGCTCCAAGATGAAGCCCCT 60.918 55.000 0.00 0.00 0.00 4.79
6105 8802 0.750911 GCTCCAAGATGAAGCCCCTG 60.751 60.000 0.00 0.00 0.00 4.45
6126 8823 1.165270 GAGGGAAAATGACACACCCG 58.835 55.000 0.00 0.00 44.57 5.28
6182 9099 2.315443 CCTTGAAGAGGGAGGCCAT 58.685 57.895 5.01 0.00 42.26 4.40
6186 9103 0.841961 TGAAGAGGGAGGCCATGATG 59.158 55.000 5.01 0.00 0.00 3.07
6197 9114 2.072487 CCATGATGGTCGGGTCCCT 61.072 63.158 6.29 0.00 31.35 4.20
6200 9117 3.399181 GATGGTCGGGTCCCTGCA 61.399 66.667 6.29 0.00 0.00 4.41
6213 9130 2.267006 CTGCAGGAGGTGTGCGAT 59.733 61.111 5.57 0.00 44.35 4.58
6215 9132 0.529337 CTGCAGGAGGTGTGCGATAG 60.529 60.000 5.57 0.00 44.35 2.08
6236 9153 2.290641 GCATAACACCGATGCCTAAAGG 59.709 50.000 0.00 0.00 43.24 3.11
6242 9159 1.633945 ACCGATGCCTAAAGGAAGGTT 59.366 47.619 0.00 0.00 39.02 3.50
6245 9162 3.877508 CCGATGCCTAAAGGAAGGTTAAG 59.122 47.826 0.00 0.00 39.02 1.85
6248 9165 4.296621 TGCCTAAAGGAAGGTTAAGGAC 57.703 45.455 0.00 0.00 39.02 3.85
6250 9167 3.055602 GCCTAAAGGAAGGTTAAGGACGA 60.056 47.826 0.00 0.00 39.02 4.20
6284 9201 2.224233 CCATTGTTGGTCATGGCACAAA 60.224 45.455 7.23 0.00 39.40 2.83
6294 9211 3.231734 TGGCACAAAGGTCGAGATG 57.768 52.632 0.00 0.00 31.92 2.90
6315 9232 1.492993 GGTCTTCACCCAAGCTCCCT 61.493 60.000 0.00 0.00 36.54 4.20
6316 9233 0.402121 GTCTTCACCCAAGCTCCCTT 59.598 55.000 0.00 0.00 31.26 3.95
6326 9243 1.265454 AAGCTCCCTTACCACCTCGG 61.265 60.000 0.00 0.00 42.50 4.63
6341 9258 2.961721 CGGTCGCACATCATCCCG 60.962 66.667 0.00 0.00 0.00 5.14
6344 9261 2.511373 TCGCACATCATCCCGCAC 60.511 61.111 0.00 0.00 0.00 5.34
6380 9297 1.745890 CCAACCACCGTCTCTCACA 59.254 57.895 0.00 0.00 0.00 3.58
6400 9317 0.323725 AACCATCATCCCACACTGGC 60.324 55.000 0.00 0.00 35.79 4.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
89 90 4.466370 TCCCTAGGCTATGTATGTATGTGC 59.534 45.833 2.05 0.00 0.00 4.57
90 91 6.351371 CCTTCCCTAGGCTATGTATGTATGTG 60.351 46.154 2.05 0.00 37.17 3.21
91 92 5.721960 CCTTCCCTAGGCTATGTATGTATGT 59.278 44.000 2.05 0.00 37.17 2.29
124 134 4.173036 ACATTAAATTGGGCGACACAAG 57.827 40.909 0.00 0.00 0.00 3.16
149 159 3.716006 CTGCACCACGGCGACAAG 61.716 66.667 16.62 1.37 36.28 3.16
224 268 2.293122 CCATCTTCACTTGTTGGCGAAA 59.707 45.455 0.00 0.00 0.00 3.46
259 309 1.084370 AAAGATACGGAGCTGCGTGC 61.084 55.000 38.74 29.44 43.29 5.34
260 310 0.924090 GAAAGATACGGAGCTGCGTG 59.076 55.000 38.74 11.16 0.00 5.34
262 312 1.812214 GCGAAAGATACGGAGCTGCG 61.812 60.000 26.95 26.95 0.00 5.18
263 313 1.491505 GGCGAAAGATACGGAGCTGC 61.492 60.000 0.00 0.00 0.00 5.25
264 314 1.209275 CGGCGAAAGATACGGAGCTG 61.209 60.000 0.00 0.00 0.00 4.24
265 315 1.065928 CGGCGAAAGATACGGAGCT 59.934 57.895 0.00 0.00 0.00 4.09
266 316 0.526954 TTCGGCGAAAGATACGGAGC 60.527 55.000 21.53 0.00 0.00 4.70
284 336 1.228956 TGCTGGCCTTGGAGCATTT 60.229 52.632 11.26 0.00 40.30 2.32
289 341 2.425143 TTTCTATGCTGGCCTTGGAG 57.575 50.000 3.32 0.00 0.00 3.86
290 342 2.511218 AGATTTCTATGCTGGCCTTGGA 59.489 45.455 3.32 0.00 0.00 3.53
291 343 2.621998 CAGATTTCTATGCTGGCCTTGG 59.378 50.000 3.32 0.00 0.00 3.61
292 344 3.548770 TCAGATTTCTATGCTGGCCTTG 58.451 45.455 3.32 0.00 0.00 3.61
293 345 3.457380 TCTCAGATTTCTATGCTGGCCTT 59.543 43.478 3.32 0.00 0.00 4.35
294 346 3.044156 TCTCAGATTTCTATGCTGGCCT 58.956 45.455 3.32 0.00 0.00 5.19
295 347 3.482156 TCTCAGATTTCTATGCTGGCC 57.518 47.619 0.00 0.00 0.00 5.36
296 348 3.188873 GCATCTCAGATTTCTATGCTGGC 59.811 47.826 6.57 0.00 39.80 4.85
354 419 0.250234 CATCACATCACACGGGGACT 59.750 55.000 0.00 0.00 0.00 3.85
358 423 4.191544 AGATTTACATCACATCACACGGG 58.808 43.478 0.00 0.00 0.00 5.28
418 487 7.756722 GCATCGTATATACCGGTACAAAATACT 59.243 37.037 18.55 0.19 0.00 2.12
425 494 2.419673 CCGCATCGTATATACCGGTACA 59.580 50.000 18.55 5.47 0.00 2.90
426 495 2.677836 TCCGCATCGTATATACCGGTAC 59.322 50.000 18.55 5.70 37.17 3.34
475 544 9.987272 TCAATCATCAGATCTGTCGTATTTATT 57.013 29.630 21.92 7.79 31.90 1.40
477 546 9.987272 AATCAATCATCAGATCTGTCGTATTTA 57.013 29.630 21.92 9.87 31.90 1.40
522 1498 8.012809 CCAACTTGAACTTTTGTTTTGTTTACC 58.987 33.333 0.00 0.00 43.66 2.85
523 1499 7.532546 GCCAACTTGAACTTTTGTTTTGTTTAC 59.467 33.333 0.00 0.00 43.66 2.01
524 1500 7.442666 AGCCAACTTGAACTTTTGTTTTGTTTA 59.557 29.630 0.00 0.00 43.66 2.01
530 1506 4.173256 CGAGCCAACTTGAACTTTTGTTT 58.827 39.130 0.00 0.00 43.66 2.83
567 1545 4.396166 CGGGTTAATCAGCAAGAGAACAAT 59.604 41.667 0.00 0.00 31.07 2.71
896 1899 2.433664 GTTCGCTGTACGGGTGGG 60.434 66.667 3.34 0.00 43.89 4.61
897 1900 2.433664 GGTTCGCTGTACGGGTGG 60.434 66.667 3.34 0.00 43.89 4.61
898 1901 2.433664 GGGTTCGCTGTACGGGTG 60.434 66.667 3.34 0.00 43.89 4.61
916 1919 3.844090 GGAGAGCGAGAGGGGTGC 61.844 72.222 0.00 0.00 0.00 5.01
941 1944 2.423926 ATCGAATCGAATCGGACCAG 57.576 50.000 21.78 0.00 42.92 4.00
942 1945 2.739292 GAATCGAATCGAATCGGACCA 58.261 47.619 21.78 3.78 42.92 4.02
952 1955 0.978385 GCCGAGATCGAATCGAATCG 59.022 55.000 26.08 26.08 43.51 3.34
953 1956 2.339728 AGCCGAGATCGAATCGAATC 57.660 50.000 21.00 10.12 42.76 2.52
1105 2129 0.602638 GGACCACAACGCACAGATCA 60.603 55.000 0.00 0.00 0.00 2.92
1141 2166 2.504519 GGCACCCCTTACCGCTAG 59.495 66.667 0.00 0.00 0.00 3.42
1162 2187 3.762992 CACGCACGCACGAACGAT 61.763 61.111 14.23 0.00 36.70 3.73
1171 2196 4.464043 CTACGAACGCACGCACGC 62.464 66.667 8.80 0.00 36.19 5.34
1197 2222 2.487967 CGCGCAATCGAAAAAGCCG 61.488 57.895 8.75 0.00 38.10 5.52
1264 2289 0.247736 AGAAACCCTACGCTCTGCTG 59.752 55.000 0.00 0.00 0.00 4.41
1270 2295 0.896940 TCCGTCAGAAACCCTACGCT 60.897 55.000 0.00 0.00 34.13 5.07
1333 2711 1.542492 AAAACATCCTGCTGGCTCAG 58.458 50.000 4.42 0.00 34.12 3.35
1356 2734 1.795951 ATAACCCAACCCGCCCAACT 61.796 55.000 0.00 0.00 0.00 3.16
1357 2735 1.304630 ATAACCCAACCCGCCCAAC 60.305 57.895 0.00 0.00 0.00 3.77
1358 2736 1.304547 CATAACCCAACCCGCCCAA 60.305 57.895 0.00 0.00 0.00 4.12
1359 2737 2.357056 CATAACCCAACCCGCCCA 59.643 61.111 0.00 0.00 0.00 5.36
1361 2739 0.818040 CTAGCATAACCCAACCCGCC 60.818 60.000 0.00 0.00 0.00 6.13
1363 2741 2.930826 ATCTAGCATAACCCAACCCG 57.069 50.000 0.00 0.00 0.00 5.28
1364 2742 3.139077 CGAATCTAGCATAACCCAACCC 58.861 50.000 0.00 0.00 0.00 4.11
1365 2743 3.139077 CCGAATCTAGCATAACCCAACC 58.861 50.000 0.00 0.00 0.00 3.77
1366 2744 2.548480 GCCGAATCTAGCATAACCCAAC 59.452 50.000 0.00 0.00 0.00 3.77
1367 2745 2.805295 CGCCGAATCTAGCATAACCCAA 60.805 50.000 0.00 0.00 0.00 4.12
1368 2746 1.270094 CGCCGAATCTAGCATAACCCA 60.270 52.381 0.00 0.00 0.00 4.51
1369 2747 1.429463 CGCCGAATCTAGCATAACCC 58.571 55.000 0.00 0.00 0.00 4.11
1370 2748 0.790814 GCGCCGAATCTAGCATAACC 59.209 55.000 0.00 0.00 0.00 2.85
1371 2749 0.435008 CGCGCCGAATCTAGCATAAC 59.565 55.000 0.00 0.00 0.00 1.89
1373 2751 0.109735 CTCGCGCCGAATCTAGCATA 60.110 55.000 0.00 0.00 34.74 3.14
1374 2752 1.372251 CTCGCGCCGAATCTAGCAT 60.372 57.895 0.00 0.00 34.74 3.79
1375 2753 2.026157 CTCGCGCCGAATCTAGCA 59.974 61.111 0.00 0.00 34.74 3.49
1377 2755 1.658717 CACCTCGCGCCGAATCTAG 60.659 63.158 0.00 0.00 34.74 2.43
1386 2780 2.251371 GAACAAACCACCTCGCGC 59.749 61.111 0.00 0.00 0.00 6.86
1387 2781 1.157870 ACTGAACAAACCACCTCGCG 61.158 55.000 0.00 0.00 0.00 5.87
1389 2783 1.867233 CTGACTGAACAAACCACCTCG 59.133 52.381 0.00 0.00 0.00 4.63
1438 2832 4.159135 CCAAAAATAGATGACAAGCAGGCT 59.841 41.667 0.00 0.00 0.00 4.58
1453 2847 6.183360 CCGATCCGTGGATAAAACCAAAAATA 60.183 38.462 0.33 0.00 41.87 1.40
1464 2868 3.337694 AACAAACCGATCCGTGGATAA 57.662 42.857 0.33 0.00 34.60 1.75
1484 2888 2.484742 ACTGAGCATGAGCATGACAA 57.515 45.000 14.27 0.00 45.49 3.18
1485 2889 2.484742 AACTGAGCATGAGCATGACA 57.515 45.000 14.27 11.27 45.49 3.58
1501 2905 2.233431 TGCTTTTGAGCAACCACAAACT 59.767 40.909 0.00 0.00 42.40 2.66
1523 2927 1.822506 GGGCTTTTCCGACTAGCTTT 58.177 50.000 0.00 0.00 35.30 3.51
1552 2956 2.930385 CTATGGCAGCCAGGTGGACG 62.930 65.000 21.51 0.00 36.75 4.79
1561 2965 2.918712 ACATAGACACTATGGCAGCC 57.081 50.000 18.69 3.66 0.00 4.85
1562 2966 3.006323 AGCTACATAGACACTATGGCAGC 59.994 47.826 23.88 23.88 37.37 5.25
1563 2967 4.862902 AGCTACATAGACACTATGGCAG 57.137 45.455 18.69 15.77 0.00 4.85
1564 2968 6.721668 AGATAAGCTACATAGACACTATGGCA 59.278 38.462 18.69 0.00 0.00 4.92
1577 2981 9.950496 CCACAAGGATTATAAGATAAGCTACAT 57.050 33.333 0.00 0.00 36.89 2.29
1581 2985 9.125026 CAAACCACAAGGATTATAAGATAAGCT 57.875 33.333 0.00 0.00 38.69 3.74
1582 2986 8.352942 CCAAACCACAAGGATTATAAGATAAGC 58.647 37.037 0.00 0.00 38.69 3.09
1583 2987 8.352942 GCCAAACCACAAGGATTATAAGATAAG 58.647 37.037 0.00 0.00 38.69 1.73
1584 2988 7.012894 CGCCAAACCACAAGGATTATAAGATAA 59.987 37.037 0.00 0.00 38.69 1.75
1591 2999 2.752903 GACGCCAAACCACAAGGATTAT 59.247 45.455 0.00 0.00 38.69 1.28
1594 3002 0.893727 GGACGCCAAACCACAAGGAT 60.894 55.000 0.00 0.00 38.69 3.24
1600 3008 0.034337 TCACTAGGACGCCAAACCAC 59.966 55.000 0.00 0.00 0.00 4.16
1609 3017 3.724508 AATCAGAGCATCACTAGGACG 57.275 47.619 0.00 0.00 37.82 4.79
1615 3023 5.779529 AACAACAAAATCAGAGCATCACT 57.220 34.783 0.00 0.00 37.82 3.41
1627 3056 3.119316 TCCGTCACAGCAAACAACAAAAT 60.119 39.130 0.00 0.00 0.00 1.82
1640 3069 4.568359 CCTCATCTTACATTTCCGTCACAG 59.432 45.833 0.00 0.00 0.00 3.66
1648 3125 5.645497 AGTCAGCAACCTCATCTTACATTTC 59.355 40.000 0.00 0.00 0.00 2.17
1669 3499 2.677836 TGCACACAACAAGAGTGAAGTC 59.322 45.455 0.00 0.00 40.74 3.01
1678 3508 2.358582 TCAACCTGATGCACACAACAAG 59.641 45.455 0.00 0.00 0.00 3.16
1681 3511 2.937591 CATCAACCTGATGCACACAAC 58.062 47.619 3.82 0.00 46.37 3.32
1771 3601 1.819928 ACAGCGGTGATGCAATAACA 58.180 45.000 23.44 0.00 37.31 2.41
1772 3602 2.919666 AACAGCGGTGATGCAATAAC 57.080 45.000 23.44 0.00 37.31 1.89
1778 3610 0.598065 AAGGAAAACAGCGGTGATGC 59.402 50.000 23.44 11.95 0.00 3.91
1784 3616 1.681264 AGGTTGAAAGGAAAACAGCGG 59.319 47.619 0.00 0.00 0.00 5.52
2040 3901 2.426024 AGCAGCAGCCACATTAAATCAG 59.574 45.455 0.00 0.00 43.56 2.90
2154 4109 1.806623 GTAAGTCATACAGCCGCAGGG 60.807 57.143 0.00 0.00 40.73 4.45
2160 4115 8.852135 AGAGTAGAAATAGTAAGTCATACAGCC 58.148 37.037 0.00 0.00 36.94 4.85
2168 4123 6.864342 TGGCACAGAGTAGAAATAGTAAGTC 58.136 40.000 0.00 0.00 0.00 3.01
2706 4667 7.874940 TCATGCCATAAATGCAGTTATTCTAC 58.125 34.615 16.32 7.31 42.92 2.59
2728 4693 8.743085 ATGCAGTTATTCTAGTGAAACATCAT 57.257 30.769 0.00 0.00 41.43 2.45
2793 4758 7.031372 CACAAGAACTAAATTATGCATGCAGT 58.969 34.615 26.69 13.42 0.00 4.40
2794 4759 7.252708 TCACAAGAACTAAATTATGCATGCAG 58.747 34.615 26.69 12.73 0.00 4.41
3316 5299 9.102757 GCAGTGAAGAATATCTCATGTTAGAAA 57.897 33.333 0.00 0.00 0.00 2.52
3475 5460 1.925946 GCGGAAACAACATGACAGCAC 60.926 52.381 0.00 0.00 0.00 4.40
3477 5462 0.310543 TGCGGAAACAACATGACAGC 59.689 50.000 0.00 0.00 0.00 4.40
3478 5463 1.333308 TGTGCGGAAACAACATGACAG 59.667 47.619 0.00 0.00 0.00 3.51
3647 5640 9.787532 CGGTGAATTTATGTTTTACAAGATGAT 57.212 29.630 0.00 0.00 0.00 2.45
3777 5772 7.040686 GCAGTTCATAACCTAAGAAAACAAGGA 60.041 37.037 0.00 0.00 34.34 3.36
3781 5776 6.770785 ACTGCAGTTCATAACCTAAGAAAACA 59.229 34.615 15.25 0.00 0.00 2.83
3782 5777 7.203255 ACTGCAGTTCATAACCTAAGAAAAC 57.797 36.000 15.25 0.00 0.00 2.43
3799 5794 1.035139 CCAAAGCAAGGAACTGCAGT 58.965 50.000 15.25 15.25 40.86 4.40
3801 5796 1.741525 GCCAAAGCAAGGAACTGCA 59.258 52.632 0.00 0.00 40.86 4.41
3818 5813 1.202510 TGTCAAAACACCAAGGCATGC 60.203 47.619 9.90 9.90 0.00 4.06
3819 5814 2.746269 CTGTCAAAACACCAAGGCATG 58.254 47.619 0.00 0.00 0.00 4.06
3889 5884 5.256474 CCACCCTACATTGACTCTCAATTT 58.744 41.667 0.00 0.00 44.03 1.82
3906 5905 3.328535 AACAAACTCAATTCCCACCCT 57.671 42.857 0.00 0.00 0.00 4.34
3912 5911 7.119116 ACCAGAAAACAAAACAAACTCAATTCC 59.881 33.333 0.00 0.00 0.00 3.01
3915 5914 9.665719 AATACCAGAAAACAAAACAAACTCAAT 57.334 25.926 0.00 0.00 0.00 2.57
3923 5922 9.191479 TCTCCTAAAATACCAGAAAACAAAACA 57.809 29.630 0.00 0.00 0.00 2.83
3942 5941 1.203440 AGGCCCTCCTTGTTCTCCTAA 60.203 52.381 0.00 0.00 40.66 2.69
4026 6025 4.314121 AGAGAAGTGCACAAGAACAGATC 58.686 43.478 21.04 3.70 0.00 2.75
4034 6033 3.726607 ACTTGAGAGAGAAGTGCACAAG 58.273 45.455 21.04 12.51 39.02 3.16
4036 6035 3.827008 AACTTGAGAGAGAAGTGCACA 57.173 42.857 21.04 0.00 33.85 4.57
4077 6077 6.378280 ACCTAGAATTTCCCATAGCAACAAAG 59.622 38.462 0.00 0.00 0.00 2.77
4087 6087 5.658190 CCAATGACAACCTAGAATTTCCCAT 59.342 40.000 0.00 0.00 0.00 4.00
4225 6230 6.536224 GGGGATGTTAAAAATGCTCATGAAAG 59.464 38.462 0.00 0.00 0.00 2.62
4247 6253 4.351874 TGTTCTACAACAAGAGAAGGGG 57.648 45.455 0.00 0.00 39.69 4.79
4478 6487 3.594603 ATGAAAGTGACCACCTACTCG 57.405 47.619 0.00 0.00 0.00 4.18
4644 6664 3.565902 TGCAGGACATCACTCTATACTCG 59.434 47.826 0.00 0.00 0.00 4.18
4649 6669 4.408270 AGAATGTGCAGGACATCACTCTAT 59.592 41.667 8.18 0.00 45.12 1.98
4653 6673 2.303890 TCAGAATGTGCAGGACATCACT 59.696 45.455 8.18 8.23 45.12 3.41
4691 6744 7.519328 CGGATCCAATTTGGTTAACCTATTACG 60.519 40.741 24.78 15.59 39.03 3.18
4816 6869 1.770294 AACAAAGGGGAAAACTCGCA 58.230 45.000 0.00 0.00 0.00 5.10
4821 6874 5.339008 ACAAGAGAAACAAAGGGGAAAAC 57.661 39.130 0.00 0.00 0.00 2.43
4968 7030 2.163613 CCAGTCTCGTTAAAATTGCCCC 59.836 50.000 0.00 0.00 0.00 5.80
4991 7054 3.488047 CCAGAAGGTTTATGAGCATTGCG 60.488 47.826 2.38 0.00 0.00 4.85
5006 7069 1.697432 TGGTCAGTTACACCCAGAAGG 59.303 52.381 0.00 0.00 43.78 3.46
5007 7070 2.368875 ACTGGTCAGTTACACCCAGAAG 59.631 50.000 17.57 0.39 45.97 2.85
5009 7072 1.691976 CACTGGTCAGTTACACCCAGA 59.308 52.381 17.57 0.00 45.97 3.86
5011 7074 1.502690 ACACTGGTCAGTTACACCCA 58.497 50.000 0.20 0.00 40.20 4.51
5015 7080 6.600032 ACATAAACAAACACTGGTCAGTTACA 59.400 34.615 0.20 0.00 40.20 2.41
5027 7093 3.801594 CCCTGTTGCACATAAACAAACAC 59.198 43.478 0.00 0.00 37.10 3.32
5033 7099 3.146066 TCTGACCCTGTTGCACATAAAC 58.854 45.455 0.00 0.00 0.00 2.01
5036 7102 3.719268 AATCTGACCCTGTTGCACATA 57.281 42.857 0.00 0.00 0.00 2.29
5137 7203 8.843262 CAACATAATATCAGGAGATTGCTTCAA 58.157 33.333 0.00 0.00 35.67 2.69
5172 7238 8.729805 AATTTCTTTTGTTTGATTGCAAGGTA 57.270 26.923 4.94 0.00 35.04 3.08
5212 7365 8.013378 ACACAGCACTTAATAAACGAATAACAC 58.987 33.333 0.00 0.00 0.00 3.32
5221 7374 8.574196 AAATGAACACACAGCACTTAATAAAC 57.426 30.769 0.00 0.00 0.00 2.01
5225 7381 6.262944 TGAGAAATGAACACACAGCACTTAAT 59.737 34.615 0.00 0.00 0.00 1.40
5247 7403 4.761235 AATGAGACACACAGCAAATGAG 57.239 40.909 0.00 0.00 0.00 2.90
5255 7416 4.122046 TCAGACACAAATGAGACACACAG 58.878 43.478 0.00 0.00 0.00 3.66
5259 7420 5.698089 TCAAGATCAGACACAAATGAGACAC 59.302 40.000 0.00 0.00 0.00 3.67
5297 7465 0.165944 CCGTTAGTTTGGCTTCGCAG 59.834 55.000 0.00 0.00 0.00 5.18
5327 7495 4.394300 CGATCCTCAGAAGCTGTTCAATTT 59.606 41.667 0.00 0.00 34.82 1.82
5330 7498 2.562738 TCGATCCTCAGAAGCTGTTCAA 59.437 45.455 0.00 0.00 34.82 2.69
5373 7543 1.741770 CTTGAGGCCAGCGTACACC 60.742 63.158 5.01 0.00 0.00 4.16
5643 7857 6.260493 ACAAGTAAACTAACACAATAACGGCA 59.740 34.615 0.00 0.00 0.00 5.69
5676 7895 2.228343 GCAAGTTTCTCAGAAGCATGCT 59.772 45.455 20.38 16.30 0.00 3.79
5694 7919 7.436118 AGAATAGCAAACAAAGATGAAAGCAA 58.564 30.769 0.00 0.00 0.00 3.91
5697 7922 9.467258 TTTGAGAATAGCAAACAAAGATGAAAG 57.533 29.630 0.00 0.00 30.87 2.62
5709 7934 6.463995 AACCAGTGTTTTGAGAATAGCAAA 57.536 33.333 0.00 0.00 33.76 3.68
5752 7977 8.303876 ACAACAGAAGCAAGTTTCTTTAAAAGA 58.696 29.630 0.00 0.00 35.28 2.52
5762 7987 5.581126 TCAATGACAACAGAAGCAAGTTT 57.419 34.783 0.00 0.00 0.00 2.66
5781 8006 2.534396 AACCAGGACGCCCCATCAA 61.534 57.895 0.00 0.00 37.41 2.57
5783 8008 2.270874 ATCAACCAGGACGCCCCATC 62.271 60.000 0.00 0.00 37.41 3.51
5795 8020 5.248248 TCAAGTACTCATCTCCAATCAACCA 59.752 40.000 0.00 0.00 0.00 3.67
5796 8021 5.734720 TCAAGTACTCATCTCCAATCAACC 58.265 41.667 0.00 0.00 0.00 3.77
5797 8022 6.183360 GCTTCAAGTACTCATCTCCAATCAAC 60.183 42.308 0.00 0.00 0.00 3.18
5798 8023 5.877012 GCTTCAAGTACTCATCTCCAATCAA 59.123 40.000 0.00 0.00 0.00 2.57
5799 8024 5.046376 TGCTTCAAGTACTCATCTCCAATCA 60.046 40.000 0.00 0.00 0.00 2.57
5801 8026 5.181748 GTGCTTCAAGTACTCATCTCCAAT 58.818 41.667 0.00 0.00 0.00 3.16
5802 8027 4.569943 GTGCTTCAAGTACTCATCTCCAA 58.430 43.478 0.00 0.00 0.00 3.53
5803 8028 3.367395 CGTGCTTCAAGTACTCATCTCCA 60.367 47.826 3.98 0.00 0.00 3.86
5804 8029 3.182967 CGTGCTTCAAGTACTCATCTCC 58.817 50.000 3.98 0.00 0.00 3.71
5807 8032 3.575630 TGACGTGCTTCAAGTACTCATC 58.424 45.455 3.98 0.10 0.00 2.92
5808 8033 3.660501 TGACGTGCTTCAAGTACTCAT 57.339 42.857 3.98 0.00 0.00 2.90
5809 8034 3.005367 TCATGACGTGCTTCAAGTACTCA 59.995 43.478 3.98 7.07 0.00 3.41
5810 8035 3.575630 TCATGACGTGCTTCAAGTACTC 58.424 45.455 3.98 1.84 0.00 2.59
5811 8036 3.660501 TCATGACGTGCTTCAAGTACT 57.339 42.857 3.98 0.00 0.00 2.73
5812 8037 4.928661 AATCATGACGTGCTTCAAGTAC 57.071 40.909 0.00 0.00 0.00 2.73
5814 8039 3.120546 CGAAATCATGACGTGCTTCAAGT 60.121 43.478 0.00 0.00 0.00 3.16
5815 8040 3.410850 CGAAATCATGACGTGCTTCAAG 58.589 45.455 0.00 0.00 0.00 3.02
5816 8041 2.159430 CCGAAATCATGACGTGCTTCAA 59.841 45.455 0.00 0.00 0.00 2.69
5818 8043 1.999735 TCCGAAATCATGACGTGCTTC 59.000 47.619 0.00 0.00 0.00 3.86
5820 8045 1.645034 CTCCGAAATCATGACGTGCT 58.355 50.000 0.00 0.00 0.00 4.40
5821 8046 0.652592 CCTCCGAAATCATGACGTGC 59.347 55.000 0.00 0.00 0.00 5.34
5822 8047 2.010145 ACCTCCGAAATCATGACGTG 57.990 50.000 0.00 0.00 0.00 4.49
5824 8049 2.476185 GCAAACCTCCGAAATCATGACG 60.476 50.000 0.00 0.00 0.00 4.35
5825 8050 2.159379 GGCAAACCTCCGAAATCATGAC 60.159 50.000 0.00 0.00 0.00 3.06
5826 8051 2.091541 GGCAAACCTCCGAAATCATGA 58.908 47.619 0.00 0.00 0.00 3.07
5827 8052 2.094675 AGGCAAACCTCCGAAATCATG 58.905 47.619 0.00 0.00 46.34 3.07
5839 8064 2.719376 TTGCTGTCAGAGGCAAACC 58.281 52.632 3.32 0.00 44.01 3.27
5842 8067 1.597854 CCGTTGCTGTCAGAGGCAA 60.598 57.895 3.32 6.63 44.64 4.52
5843 8068 1.830587 ATCCGTTGCTGTCAGAGGCA 61.831 55.000 3.32 0.00 36.62 4.75
5844 8069 0.674895 AATCCGTTGCTGTCAGAGGC 60.675 55.000 3.32 0.00 0.00 4.70
5845 8070 1.734465 GAAATCCGTTGCTGTCAGAGG 59.266 52.381 3.32 1.03 0.00 3.69
5846 8071 2.416747 TGAAATCCGTTGCTGTCAGAG 58.583 47.619 3.32 0.00 0.00 3.35
5848 8073 2.549754 AGTTGAAATCCGTTGCTGTCAG 59.450 45.455 0.00 0.00 0.00 3.51
5849 8074 2.571212 AGTTGAAATCCGTTGCTGTCA 58.429 42.857 0.00 0.00 0.00 3.58
5853 8078 6.039382 AGTTTTTCTAGTTGAAATCCGTTGCT 59.961 34.615 0.53 0.00 43.34 3.91
5854 8079 6.142320 CAGTTTTTCTAGTTGAAATCCGTTGC 59.858 38.462 0.53 0.00 43.34 4.17
5855 8080 6.636850 CCAGTTTTTCTAGTTGAAATCCGTTG 59.363 38.462 0.53 0.00 43.34 4.10
5856 8081 6.238925 CCCAGTTTTTCTAGTTGAAATCCGTT 60.239 38.462 0.53 0.00 43.34 4.44
5857 8082 5.240844 CCCAGTTTTTCTAGTTGAAATCCGT 59.759 40.000 0.53 0.00 43.34 4.69
5858 8083 5.699839 CCCAGTTTTTCTAGTTGAAATCCG 58.300 41.667 0.53 0.00 43.34 4.18
5859 8084 5.470368 GCCCAGTTTTTCTAGTTGAAATCC 58.530 41.667 0.53 0.00 43.34 3.01
5860 8085 5.048991 TCGCCCAGTTTTTCTAGTTGAAATC 60.049 40.000 0.53 0.00 43.34 2.17
5861 8086 4.825085 TCGCCCAGTTTTTCTAGTTGAAAT 59.175 37.500 0.53 0.00 43.34 2.17
5863 8088 3.811083 TCGCCCAGTTTTTCTAGTTGAA 58.189 40.909 0.00 0.00 0.00 2.69
5864 8089 3.478857 TCGCCCAGTTTTTCTAGTTGA 57.521 42.857 0.00 0.00 0.00 3.18
5866 8091 5.105675 TGTTTTTCGCCCAGTTTTTCTAGTT 60.106 36.000 0.00 0.00 0.00 2.24
5867 8092 4.399934 TGTTTTTCGCCCAGTTTTTCTAGT 59.600 37.500 0.00 0.00 0.00 2.57
5868 8093 4.927422 TGTTTTTCGCCCAGTTTTTCTAG 58.073 39.130 0.00 0.00 0.00 2.43
5869 8094 4.641094 TCTGTTTTTCGCCCAGTTTTTCTA 59.359 37.500 0.00 0.00 0.00 2.10
5870 8095 3.445805 TCTGTTTTTCGCCCAGTTTTTCT 59.554 39.130 0.00 0.00 0.00 2.52
5871 8096 3.776340 TCTGTTTTTCGCCCAGTTTTTC 58.224 40.909 0.00 0.00 0.00 2.29
5872 8097 3.878160 TCTGTTTTTCGCCCAGTTTTT 57.122 38.095 0.00 0.00 0.00 1.94
5880 8396 3.181575 CGGTTTTCAATCTGTTTTTCGCC 59.818 43.478 0.00 0.00 0.00 5.54
5888 8404 2.270352 TCAGCCGGTTTTCAATCTGT 57.730 45.000 1.90 0.00 0.00 3.41
5889 8405 3.641437 TTTCAGCCGGTTTTCAATCTG 57.359 42.857 1.90 0.00 0.00 2.90
5896 8412 2.035632 TGATGGTTTTCAGCCGGTTTT 58.964 42.857 1.90 0.00 0.00 2.43
5897 8413 1.698506 TGATGGTTTTCAGCCGGTTT 58.301 45.000 1.90 0.00 0.00 3.27
5898 8414 1.923356 ATGATGGTTTTCAGCCGGTT 58.077 45.000 1.90 0.00 0.00 4.44
5901 8417 4.129380 TCAGATATGATGGTTTTCAGCCG 58.871 43.478 0.00 0.00 0.00 5.52
5903 8419 6.441093 TGTTCAGATATGATGGTTTTCAGC 57.559 37.500 0.00 0.00 0.00 4.26
5910 8426 8.274322 TGGAGTAATTTGTTCAGATATGATGGT 58.726 33.333 0.00 0.00 0.00 3.55
5911 8427 8.681486 TGGAGTAATTTGTTCAGATATGATGG 57.319 34.615 0.00 0.00 0.00 3.51
5915 8431 9.784531 ACCTATGGAGTAATTTGTTCAGATATG 57.215 33.333 0.00 0.00 0.00 1.78
5916 8432 9.784531 CACCTATGGAGTAATTTGTTCAGATAT 57.215 33.333 0.00 0.00 0.00 1.63
5917 8433 8.988060 TCACCTATGGAGTAATTTGTTCAGATA 58.012 33.333 0.00 0.00 0.00 1.98
5918 8434 7.861629 TCACCTATGGAGTAATTTGTTCAGAT 58.138 34.615 0.00 0.00 0.00 2.90
5919 8435 7.252612 TCACCTATGGAGTAATTTGTTCAGA 57.747 36.000 0.00 0.00 0.00 3.27
5920 8436 8.400947 CAATCACCTATGGAGTAATTTGTTCAG 58.599 37.037 0.00 0.00 0.00 3.02
5921 8437 7.888021 ACAATCACCTATGGAGTAATTTGTTCA 59.112 33.333 0.00 0.00 0.00 3.18
5922 8438 8.281212 ACAATCACCTATGGAGTAATTTGTTC 57.719 34.615 0.00 0.00 0.00 3.18
5924 8440 6.538742 CGACAATCACCTATGGAGTAATTTGT 59.461 38.462 0.00 0.00 0.00 2.83
5926 8442 6.884832 TCGACAATCACCTATGGAGTAATTT 58.115 36.000 0.00 0.00 0.00 1.82
5928 8444 5.833667 TCTCGACAATCACCTATGGAGTAAT 59.166 40.000 0.00 0.00 0.00 1.89
5929 8445 5.198207 TCTCGACAATCACCTATGGAGTAA 58.802 41.667 0.00 0.00 0.00 2.24
5931 8447 3.632333 TCTCGACAATCACCTATGGAGT 58.368 45.455 0.00 0.00 0.00 3.85
5932 8448 4.862902 ATCTCGACAATCACCTATGGAG 57.137 45.455 0.00 0.00 0.00 3.86
5933 8449 5.010719 GGTTATCTCGACAATCACCTATGGA 59.989 44.000 0.00 0.00 0.00 3.41
5934 8450 5.230942 GGTTATCTCGACAATCACCTATGG 58.769 45.833 0.00 0.00 0.00 2.74
5935 8451 5.221441 TGGGTTATCTCGACAATCACCTATG 60.221 44.000 6.43 0.00 0.00 2.23
5936 8452 4.899457 TGGGTTATCTCGACAATCACCTAT 59.101 41.667 6.43 0.00 0.00 2.57
5937 8453 4.098960 GTGGGTTATCTCGACAATCACCTA 59.901 45.833 6.43 0.00 0.00 3.08
5938 8454 3.104512 TGGGTTATCTCGACAATCACCT 58.895 45.455 6.43 0.00 0.00 4.00
5939 8455 3.195661 GTGGGTTATCTCGACAATCACC 58.804 50.000 0.00 0.00 0.00 4.02
5940 8456 3.857052 TGTGGGTTATCTCGACAATCAC 58.143 45.455 0.00 0.00 0.00 3.06
5941 8457 4.753516 ATGTGGGTTATCTCGACAATCA 57.246 40.909 0.00 0.00 0.00 2.57
5942 8458 4.876107 ACAATGTGGGTTATCTCGACAATC 59.124 41.667 0.00 0.00 0.00 2.67
5943 8459 4.843728 ACAATGTGGGTTATCTCGACAAT 58.156 39.130 0.00 0.00 0.00 2.71
5944 8460 4.280436 ACAATGTGGGTTATCTCGACAA 57.720 40.909 0.00 0.00 0.00 3.18
5945 8461 3.973206 ACAATGTGGGTTATCTCGACA 57.027 42.857 0.00 0.00 0.00 4.35
5946 8462 3.802685 GCTACAATGTGGGTTATCTCGAC 59.197 47.826 0.00 0.00 0.00 4.20
5947 8463 3.490249 CGCTACAATGTGGGTTATCTCGA 60.490 47.826 0.00 0.00 0.00 4.04
5948 8464 2.794910 CGCTACAATGTGGGTTATCTCG 59.205 50.000 0.00 0.00 0.00 4.04
5949 8465 3.131396 CCGCTACAATGTGGGTTATCTC 58.869 50.000 0.00 0.00 34.20 2.75
5950 8466 2.769663 TCCGCTACAATGTGGGTTATCT 59.230 45.455 0.00 0.00 38.11 1.98
5951 8467 2.870411 GTCCGCTACAATGTGGGTTATC 59.130 50.000 0.00 0.00 38.11 1.75
5952 8468 2.740580 CGTCCGCTACAATGTGGGTTAT 60.741 50.000 0.00 0.00 38.11 1.89
5953 8469 1.404449 CGTCCGCTACAATGTGGGTTA 60.404 52.381 0.00 0.00 38.11 2.85
5954 8470 0.672401 CGTCCGCTACAATGTGGGTT 60.672 55.000 0.00 0.00 38.11 4.11
5955 8471 1.079405 CGTCCGCTACAATGTGGGT 60.079 57.895 0.00 0.00 38.11 4.51
5956 8472 2.461110 GCGTCCGCTACAATGTGGG 61.461 63.158 4.10 0.00 38.11 4.61
5957 8473 2.798501 CGCGTCCGCTACAATGTGG 61.799 63.158 10.21 0.00 39.32 4.17
5958 8474 2.092291 ACGCGTCCGCTACAATGTG 61.092 57.895 5.58 0.00 39.32 3.21
5959 8475 2.092291 CACGCGTCCGCTACAATGT 61.092 57.895 9.86 0.00 39.32 2.71
5960 8476 1.348538 TTCACGCGTCCGCTACAATG 61.349 55.000 9.86 0.00 39.32 2.82
5961 8477 1.076533 CTTCACGCGTCCGCTACAAT 61.077 55.000 9.86 0.00 39.32 2.71
5962 8478 1.731613 CTTCACGCGTCCGCTACAA 60.732 57.895 9.86 0.00 39.32 2.41
5963 8479 2.126618 CTTCACGCGTCCGCTACA 60.127 61.111 9.86 0.00 39.32 2.74
5964 8480 2.879462 CCTTCACGCGTCCGCTAC 60.879 66.667 9.86 0.00 39.32 3.58
5965 8481 3.367743 ACCTTCACGCGTCCGCTA 61.368 61.111 9.86 0.00 39.32 4.26
5968 8484 1.736645 ATTCACCTTCACGCGTCCG 60.737 57.895 9.86 0.00 41.14 4.79
5969 8485 0.669318 TCATTCACCTTCACGCGTCC 60.669 55.000 9.86 0.00 0.00 4.79
5970 8486 1.144969 TTCATTCACCTTCACGCGTC 58.855 50.000 9.86 0.00 0.00 5.19
5971 8487 1.588674 TTTCATTCACCTTCACGCGT 58.411 45.000 5.58 5.58 0.00 6.01
5972 8488 2.679355 TTTTCATTCACCTTCACGCG 57.321 45.000 3.53 3.53 0.00 6.01
5973 8489 4.161333 CAGATTTTCATTCACCTTCACGC 58.839 43.478 0.00 0.00 0.00 5.34
5974 8490 4.161333 GCAGATTTTCATTCACCTTCACG 58.839 43.478 0.00 0.00 0.00 4.35
5975 8491 4.919754 GTGCAGATTTTCATTCACCTTCAC 59.080 41.667 0.00 0.00 0.00 3.18
5976 8492 4.583907 TGTGCAGATTTTCATTCACCTTCA 59.416 37.500 0.00 0.00 0.00 3.02
5977 8493 5.125100 TGTGCAGATTTTCATTCACCTTC 57.875 39.130 0.00 0.00 0.00 3.46
5978 8494 5.534207 TTGTGCAGATTTTCATTCACCTT 57.466 34.783 0.00 0.00 0.00 3.50
5979 8495 5.534207 TTTGTGCAGATTTTCATTCACCT 57.466 34.783 0.00 0.00 0.00 4.00
5980 8496 6.258507 AGTTTTTGTGCAGATTTTCATTCACC 59.741 34.615 0.00 0.00 0.00 4.02
5981 8497 7.237920 AGTTTTTGTGCAGATTTTCATTCAC 57.762 32.000 0.00 0.00 0.00 3.18
5982 8498 7.846644 AAGTTTTTGTGCAGATTTTCATTCA 57.153 28.000 0.00 0.00 0.00 2.57
5983 8499 8.006027 GCTAAGTTTTTGTGCAGATTTTCATTC 58.994 33.333 0.00 0.00 0.00 2.67
5984 8500 7.041848 GGCTAAGTTTTTGTGCAGATTTTCATT 60.042 33.333 0.00 0.00 0.00 2.57
5985 8501 6.424812 GGCTAAGTTTTTGTGCAGATTTTCAT 59.575 34.615 0.00 0.00 0.00 2.57
5986 8502 5.752955 GGCTAAGTTTTTGTGCAGATTTTCA 59.247 36.000 0.00 0.00 0.00 2.69
5987 8503 5.752955 TGGCTAAGTTTTTGTGCAGATTTTC 59.247 36.000 0.00 0.00 0.00 2.29
5988 8504 5.523552 GTGGCTAAGTTTTTGTGCAGATTTT 59.476 36.000 0.00 0.00 0.00 1.82
5996 8512 3.779759 TGCAAGTGGCTAAGTTTTTGTG 58.220 40.909 0.00 0.00 45.15 3.33
5997 8513 4.180817 GTTGCAAGTGGCTAAGTTTTTGT 58.819 39.130 0.00 0.00 45.15 2.83
6005 8521 0.184933 AGGTGGTTGCAAGTGGCTAA 59.815 50.000 0.00 0.00 45.15 3.09
6006 8522 0.184933 AAGGTGGTTGCAAGTGGCTA 59.815 50.000 0.00 0.00 45.15 3.93
6013 8529 2.224018 GCAAGATTGAAGGTGGTTGCAA 60.224 45.455 0.00 0.00 40.01 4.08
6017 8533 1.963515 GTGGCAAGATTGAAGGTGGTT 59.036 47.619 0.00 0.00 0.00 3.67
6024 8714 2.699846 AGGCTTTTGTGGCAAGATTGAA 59.300 40.909 0.00 0.00 34.73 2.69
6027 8717 1.345415 CCAGGCTTTTGTGGCAAGATT 59.655 47.619 0.00 0.00 34.73 2.40
6028 8718 0.971386 CCAGGCTTTTGTGGCAAGAT 59.029 50.000 0.00 0.00 34.73 2.40
6030 8720 0.032540 GTCCAGGCTTTTGTGGCAAG 59.967 55.000 0.00 0.00 33.43 4.01
6039 8729 1.152756 GTGGTGGTGTCCAGGCTTT 60.153 57.895 0.00 0.00 38.23 3.51
6044 8734 2.107041 TTAGCGGTGGTGGTGTCCAG 62.107 60.000 0.00 0.00 38.23 3.86
6046 8736 1.670083 GTTAGCGGTGGTGGTGTCC 60.670 63.158 0.00 0.00 0.00 4.02
6080 8773 1.404717 GCTTCATCTTGGAGCTCACGA 60.405 52.381 17.19 8.63 0.00 4.35
6083 8776 0.254178 GGGCTTCATCTTGGAGCTCA 59.746 55.000 17.19 0.00 0.00 4.26
6104 8801 2.224769 GGGTGTGTCATTTTCCCTCTCA 60.225 50.000 0.00 0.00 35.63 3.27
6105 8802 2.437413 GGGTGTGTCATTTTCCCTCTC 58.563 52.381 0.00 0.00 35.63 3.20
6117 8814 2.665185 GTGGCACTCGGGTGTGTC 60.665 66.667 18.43 9.36 44.65 3.67
6126 8823 0.460284 ATCGGACGATTGTGGCACTC 60.460 55.000 19.83 8.01 0.00 3.51
6131 8828 1.660607 CTTGTGATCGGACGATTGTGG 59.339 52.381 8.75 0.00 34.60 4.17
6132 8829 2.606108 TCTTGTGATCGGACGATTGTG 58.394 47.619 8.75 0.00 34.60 3.33
6133 8830 3.448686 GATCTTGTGATCGGACGATTGT 58.551 45.455 8.75 0.00 39.56 2.71
6166 9083 1.213678 CATCATGGCCTCCCTCTTCAA 59.786 52.381 3.32 0.00 0.00 2.69
6175 9092 2.111878 CCCGACCATCATGGCCTC 59.888 66.667 2.52 0.00 42.67 4.70
6176 9093 2.692368 ACCCGACCATCATGGCCT 60.692 61.111 2.52 0.00 42.67 5.19
6177 9094 2.203209 GACCCGACCATCATGGCC 60.203 66.667 2.52 0.00 42.67 5.36
6178 9095 2.203209 GGACCCGACCATCATGGC 60.203 66.667 2.52 0.00 42.67 4.40
6182 9099 3.399181 GCAGGGACCCGACCATCA 61.399 66.667 4.40 0.00 0.00 3.07
6197 9114 1.517361 CTATCGCACACCTCCTGCA 59.483 57.895 0.00 0.00 34.00 4.41
6200 9117 4.034246 TGCTATCGCACACCTCCT 57.966 55.556 0.00 0.00 42.25 3.69
6218 9135 3.370103 CCTTCCTTTAGGCATCGGTGTTA 60.370 47.826 0.00 0.00 34.44 2.41
6233 9150 2.038164 GTGGTCGTCCTTAACCTTCCTT 59.962 50.000 0.00 0.00 36.47 3.36
6236 9153 2.804527 GTTGTGGTCGTCCTTAACCTTC 59.195 50.000 0.00 0.00 36.47 3.46
6242 9159 1.005867 GCGGTTGTGGTCGTCCTTA 60.006 57.895 0.00 0.00 34.23 2.69
6245 9162 2.589442 TTGCGGTTGTGGTCGTCC 60.589 61.111 0.00 0.00 0.00 4.79
6248 9165 1.791103 AATGGTTGCGGTTGTGGTCG 61.791 55.000 0.00 0.00 0.00 4.79
6250 9167 1.040339 ACAATGGTTGCGGTTGTGGT 61.040 50.000 0.00 0.00 34.98 4.16
6284 9201 0.041238 TGAAGACCCCATCTCGACCT 59.959 55.000 0.00 0.00 36.27 3.85
6287 9204 2.591915 GGTGAAGACCCCATCTCGA 58.408 57.895 0.00 0.00 36.27 4.04
6326 9243 2.511373 TGCGGGATGATGTGCGAC 60.511 61.111 0.00 0.00 0.00 5.19
6328 9245 2.512286 AGTGCGGGATGATGTGCG 60.512 61.111 0.00 0.00 0.00 5.34
6361 9278 1.668151 GTGAGAGACGGTGGTTGGC 60.668 63.158 0.00 0.00 0.00 4.52
6380 9297 1.892329 GCCAGTGTGGGATGATGGTTT 60.892 52.381 0.00 0.00 38.19 3.27
6400 9317 1.448540 AGAAGAGACATTGCCGGCG 60.449 57.895 23.90 10.49 0.00 6.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.