Multiple sequence alignment - TraesCS5D01G019600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G019600 chr5D 100.000 7156 0 0 1 7156 12228674 12221519 0.000000e+00 13215.0
1 TraesCS5D01G019600 chr5D 91.814 1185 74 10 5567 6741 12174943 12173772 0.000000e+00 1629.0
2 TraesCS5D01G019600 chr5D 86.162 925 81 16 5288 6186 12164833 12163930 0.000000e+00 955.0
3 TraesCS5D01G019600 chr5D 84.561 421 45 16 3852 4264 12216016 12215608 4.020000e-107 399.0
4 TraesCS5D01G019600 chr5D 78.905 621 73 36 3440 4037 12166353 12165768 1.130000e-97 368.0
5 TraesCS5D01G019600 chr5D 86.047 301 28 6 4394 4682 12215429 12215131 1.940000e-80 311.0
6 TraesCS5D01G019600 chr5D 86.692 263 24 5 4456 4708 12165164 12164903 1.520000e-71 281.0
7 TraesCS5D01G019600 chr5D 93.333 105 5 2 6813 6916 12163653 12163550 3.460000e-33 154.0
8 TraesCS5D01G019600 chr5D 85.517 145 11 4 5067 5211 424122341 424122207 7.480000e-30 143.0
9 TraesCS5D01G019600 chr5A 93.072 3695 191 20 1405 5062 9615196 9611530 0.000000e+00 5345.0
10 TraesCS5D01G019600 chr5A 94.939 1225 47 10 5287 6510 9611535 9610325 0.000000e+00 1905.0
11 TraesCS5D01G019600 chr5A 94.627 1098 42 6 289 1378 9616449 9615361 0.000000e+00 1685.0
12 TraesCS5D01G019600 chr5A 96.018 653 24 2 6504 7156 9610225 9609575 0.000000e+00 1061.0
13 TraesCS5D01G019600 chr5A 89.220 872 61 15 5871 6737 9607590 9606747 0.000000e+00 1059.0
14 TraesCS5D01G019600 chr5A 86.860 449 40 9 6470 6916 9498671 9498240 1.080000e-132 484.0
15 TraesCS5D01G019600 chr5A 85.084 476 51 13 3804 4271 9608934 9608471 1.090000e-127 468.0
16 TraesCS5D01G019600 chr5A 90.114 263 23 1 5567 5829 9607855 9607596 8.890000e-89 339.0
17 TraesCS5D01G019600 chr5A 86.174 311 35 3 4394 4698 9608299 9607991 5.350000e-86 329.0
18 TraesCS5D01G019600 chr5A 80.876 251 33 8 4456 4702 9502213 9501974 4.410000e-42 183.0
19 TraesCS5D01G019600 chr5A 89.610 77 8 0 3612 3688 9507934 9507858 1.640000e-16 99.0
20 TraesCS5D01G019600 chr5B 94.226 2338 78 33 1433 3741 12572331 12574640 0.000000e+00 3517.0
21 TraesCS5D01G019600 chr5B 88.589 1481 114 17 5287 6752 12669086 12670526 0.000000e+00 1748.0
22 TraesCS5D01G019600 chr5B 95.547 1078 45 3 5434 6510 12576702 12577777 0.000000e+00 1722.0
23 TraesCS5D01G019600 chr5B 91.085 1290 70 17 126 1401 12570924 12572182 0.000000e+00 1703.0
24 TraesCS5D01G019600 chr5B 94.591 795 30 4 4280 5064 12575818 12576609 0.000000e+00 1218.0
25 TraesCS5D01G019600 chr5B 92.857 560 38 2 4507 5064 12668534 12669093 0.000000e+00 811.0
26 TraesCS5D01G019600 chr5B 91.280 539 33 6 3756 4281 12575019 12575556 0.000000e+00 723.0
27 TraesCS5D01G019600 chr5B 92.717 357 13 4 6504 6859 12577934 12578278 2.980000e-138 503.0
28 TraesCS5D01G019600 chr5B 87.302 441 53 3 5835 6273 12583913 12584352 1.070000e-137 501.0
29 TraesCS5D01G019600 chr5B 87.137 241 29 1 6918 7156 12649488 12649728 9.150000e-69 272.0
30 TraesCS5D01G019600 chr5B 92.935 184 13 0 6973 7156 12578330 12578513 1.180000e-67 268.0
31 TraesCS5D01G019600 chr5B 87.288 236 26 2 6918 7153 12671373 12671604 4.260000e-67 267.0
32 TraesCS5D01G019600 chr5B 95.050 101 5 0 5287 5387 12576602 12576702 7.430000e-35 159.0
33 TraesCS5D01G019600 chr5B 96.970 33 1 0 1399 1431 12572282 12572314 1.000000e-03 56.5
34 TraesCS5D01G019600 chr3A 87.970 1488 144 17 2121 3586 422915234 422913760 0.000000e+00 1724.0
35 TraesCS5D01G019600 chr3A 84.041 871 94 25 5319 6167 422910572 422909725 0.000000e+00 797.0
36 TraesCS5D01G019600 chr3A 83.578 682 91 15 1399 2071 422915980 422915311 2.840000e-173 619.0
37 TraesCS5D01G019600 chr3A 86.071 560 56 16 848 1400 422916620 422916076 3.720000e-162 582.0
38 TraesCS5D01G019600 chr3A 93.860 228 12 2 5064 5290 290447730 290447956 6.870000e-90 342.0
39 TraesCS5D01G019600 chr3A 92.965 199 14 0 4481 4679 422910924 422910726 2.530000e-74 291.0
40 TraesCS5D01G019600 chr3A 76.724 580 92 26 3897 4446 422911691 422911125 4.230000e-72 283.0
41 TraesCS5D01G019600 chr3D 87.871 1484 148 14 2121 3583 309913978 309915450 0.000000e+00 1714.0
42 TraesCS5D01G019600 chr3D 83.486 872 99 23 5318 6167 309917036 309917884 0.000000e+00 771.0
43 TraesCS5D01G019600 chr3D 83.626 684 87 19 1399 2071 309913136 309913805 2.840000e-173 619.0
44 TraesCS5D01G019600 chr3D 85.387 568 58 19 842 1400 309912489 309913040 3.750000e-157 566.0
45 TraesCS5D01G019600 chr3D 79.708 823 109 36 3897 4679 309915793 309916597 6.310000e-150 542.0
46 TraesCS5D01G019600 chr3B 87.693 1487 151 14 2121 3586 411425683 411424208 0.000000e+00 1703.0
47 TraesCS5D01G019600 chr3B 83.582 871 97 21 5320 6167 411422924 411422077 0.000000e+00 774.0
48 TraesCS5D01G019600 chr3B 83.602 683 89 17 1399 2071 411426525 411425856 2.840000e-173 619.0
49 TraesCS5D01G019600 chr3B 87.205 508 52 9 848 1353 411427165 411426669 3.750000e-157 566.0
50 TraesCS5D01G019600 chr3B 79.493 829 106 38 3897 4679 411423889 411423079 1.370000e-146 531.0
51 TraesCS5D01G019600 chr3B 92.079 101 5 3 5061 5159 42146612 42146513 9.680000e-29 139.0
52 TraesCS5D01G019600 chr4D 93.966 232 12 2 5064 5293 113153594 113153363 4.110000e-92 350.0
53 TraesCS5D01G019600 chr2B 94.323 229 11 2 5066 5293 296018079 296017852 4.110000e-92 350.0
54 TraesCS5D01G019600 chr2B 84.112 107 17 0 5068 5174 504480540 504480646 3.530000e-18 104.0
55 TraesCS5D01G019600 chr1D 90.086 232 20 3 5064 5293 160717126 160716896 1.510000e-76 298.0
56 TraesCS5D01G019600 chr7D 84.393 173 12 3 5066 5224 168771449 168771620 9.610000e-34 156.0
57 TraesCS5D01G019600 chr7D 91.045 67 5 1 5225 5290 168771943 168772009 9.890000e-14 89.8
58 TraesCS5D01G019600 chr2A 82.178 101 18 0 5080 5180 560688484 560688384 3.560000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G019600 chr5D 12221519 12228674 7155 True 13215.000000 13215 100.000000 1 7156 1 chr5D.!!$R2 7155
1 TraesCS5D01G019600 chr5D 12173772 12174943 1171 True 1629.000000 1629 91.814000 5567 6741 1 chr5D.!!$R1 1174
2 TraesCS5D01G019600 chr5D 12163550 12166353 2803 True 439.500000 955 86.273000 3440 6916 4 chr5D.!!$R4 3476
3 TraesCS5D01G019600 chr5D 12215131 12216016 885 True 355.000000 399 85.304000 3852 4682 2 chr5D.!!$R5 830
4 TraesCS5D01G019600 chr5A 9606747 9616449 9702 True 1523.875000 5345 91.156000 289 7156 8 chr5A.!!$R3 6867
5 TraesCS5D01G019600 chr5A 9498240 9502213 3973 True 333.500000 484 83.868000 4456 6916 2 chr5A.!!$R2 2460
6 TraesCS5D01G019600 chr5B 12570924 12578513 7589 False 1096.611111 3517 93.822333 126 7156 9 chr5B.!!$F3 7030
7 TraesCS5D01G019600 chr5B 12668534 12671604 3070 False 942.000000 1748 89.578000 4507 7153 3 chr5B.!!$F4 2646
8 TraesCS5D01G019600 chr3A 422909725 422916620 6895 True 716.000000 1724 85.224833 848 6167 6 chr3A.!!$R1 5319
9 TraesCS5D01G019600 chr3D 309912489 309917884 5395 False 842.400000 1714 84.015600 842 6167 5 chr3D.!!$F1 5325
10 TraesCS5D01G019600 chr3B 411422077 411427165 5088 True 838.600000 1703 84.315000 848 6167 5 chr3B.!!$R2 5319

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
243 244 0.037232 GTGGGAAACTCAGGACTCCG 60.037 60.000 0.00 0.00 0.00 4.63 F
730 743 0.469070 ATGAGCACTCAGGAGATGGC 59.531 55.000 6.50 4.09 43.61 4.40 F
1764 1946 0.255890 GGCCTGGAGGTTATCTGCAA 59.744 55.000 0.00 0.00 43.27 4.08 F
2119 2439 0.389025 TCATACGATGCCTCATGCGT 59.611 50.000 0.00 0.00 45.60 5.24 F
3081 3421 0.893447 AGGCAATTTCTGAAGGCTGC 59.107 50.000 10.29 10.29 35.41 5.25 F
3801 6284 1.452399 GTTCACTCTCGACGCTGTTTC 59.548 52.381 0.00 0.00 0.00 2.78 F
5213 8811 0.181350 GGATCACCAATCGGAGGCTT 59.819 55.000 0.00 0.00 34.99 4.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1463 1637 0.622665 AGAAAGGCACCAGCAGCTAT 59.377 50.0 0.0 0.0 44.61 2.97 R
2461 2781 0.396060 GGCCATTTTGTTCAGCCCAA 59.604 50.0 0.0 0.0 37.66 4.12 R
3608 3949 0.113972 TGATGGTGGCATTGGTGGAA 59.886 50.0 0.0 0.0 0.00 3.53 R
3609 3950 0.113972 TTGATGGTGGCATTGGTGGA 59.886 50.0 0.0 0.0 0.00 4.02 R
4390 7772 1.064003 TAACTCCTGCCCAGCAAGAA 58.936 50.0 0.0 0.0 38.41 2.52 R
5235 8833 0.034089 ATTAAAGCAGAGGCCGCCTT 60.034 50.0 14.7 0.0 42.56 4.35 R
7075 17986 1.168714 GCATGAGGAAGGGTGACAAC 58.831 55.0 0.0 0.0 0.00 3.32 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.423446 GCGGATCTGGGGTGCTAG 59.577 66.667 3.14 0.00 0.00 3.42
18 19 2.134287 GCGGATCTGGGGTGCTAGA 61.134 63.158 3.14 0.00 0.00 2.43
19 20 1.476007 GCGGATCTGGGGTGCTAGAT 61.476 60.000 3.14 0.00 36.41 1.98
20 21 1.051812 CGGATCTGGGGTGCTAGATT 58.948 55.000 0.00 0.00 33.97 2.40
21 22 1.417890 CGGATCTGGGGTGCTAGATTT 59.582 52.381 0.00 0.00 33.97 2.17
22 23 2.158755 CGGATCTGGGGTGCTAGATTTT 60.159 50.000 0.00 0.00 33.97 1.82
23 24 3.217626 GGATCTGGGGTGCTAGATTTTG 58.782 50.000 0.00 0.00 33.97 2.44
24 25 3.372025 GGATCTGGGGTGCTAGATTTTGT 60.372 47.826 0.00 0.00 33.97 2.83
25 26 3.071874 TCTGGGGTGCTAGATTTTGTG 57.928 47.619 0.00 0.00 0.00 3.33
26 27 1.474077 CTGGGGTGCTAGATTTTGTGC 59.526 52.381 0.00 0.00 0.00 4.57
27 28 1.075374 TGGGGTGCTAGATTTTGTGCT 59.925 47.619 0.00 0.00 0.00 4.40
28 29 1.745653 GGGGTGCTAGATTTTGTGCTC 59.254 52.381 0.00 0.00 0.00 4.26
29 30 1.745653 GGGTGCTAGATTTTGTGCTCC 59.254 52.381 0.00 0.00 38.07 4.70
30 31 2.436417 GGTGCTAGATTTTGTGCTCCA 58.564 47.619 0.00 0.00 38.49 3.86
31 32 2.421424 GGTGCTAGATTTTGTGCTCCAG 59.579 50.000 0.00 0.00 38.49 3.86
32 33 3.077359 GTGCTAGATTTTGTGCTCCAGT 58.923 45.455 0.00 0.00 0.00 4.00
33 34 3.076621 TGCTAGATTTTGTGCTCCAGTG 58.923 45.455 0.00 0.00 0.00 3.66
34 35 2.421424 GCTAGATTTTGTGCTCCAGTGG 59.579 50.000 1.40 1.40 0.00 4.00
35 36 2.957402 AGATTTTGTGCTCCAGTGGA 57.043 45.000 12.40 12.40 0.00 4.02
36 37 3.446442 AGATTTTGTGCTCCAGTGGAT 57.554 42.857 13.56 0.00 0.00 3.41
37 38 3.087031 AGATTTTGTGCTCCAGTGGATG 58.913 45.455 13.56 8.24 0.00 3.51
38 39 2.655090 TTTTGTGCTCCAGTGGATGA 57.345 45.000 13.56 0.00 0.00 2.92
39 40 2.885135 TTTGTGCTCCAGTGGATGAT 57.115 45.000 13.56 0.00 0.00 2.45
40 41 2.885135 TTGTGCTCCAGTGGATGATT 57.115 45.000 13.56 0.00 0.00 2.57
41 42 2.885135 TGTGCTCCAGTGGATGATTT 57.115 45.000 13.56 0.00 0.00 2.17
42 43 2.715046 TGTGCTCCAGTGGATGATTTC 58.285 47.619 13.56 1.56 0.00 2.17
43 44 2.306805 TGTGCTCCAGTGGATGATTTCT 59.693 45.455 13.56 0.00 0.00 2.52
44 45 2.941720 GTGCTCCAGTGGATGATTTCTC 59.058 50.000 13.56 0.00 0.00 2.87
45 46 2.208431 GCTCCAGTGGATGATTTCTCG 58.792 52.381 13.56 0.00 0.00 4.04
46 47 2.419297 GCTCCAGTGGATGATTTCTCGT 60.419 50.000 13.56 0.00 0.00 4.18
47 48 3.452474 CTCCAGTGGATGATTTCTCGTC 58.548 50.000 13.56 0.00 36.79 4.20
48 49 2.159240 TCCAGTGGATGATTTCTCGTCG 60.159 50.000 8.12 0.00 38.16 5.12
49 50 2.159240 CCAGTGGATGATTTCTCGTCGA 60.159 50.000 1.68 0.00 38.16 4.20
50 51 3.511699 CAGTGGATGATTTCTCGTCGAA 58.488 45.455 0.00 0.00 38.16 3.71
51 52 3.549471 CAGTGGATGATTTCTCGTCGAAG 59.451 47.826 0.00 0.00 38.16 3.79
52 53 3.193691 AGTGGATGATTTCTCGTCGAAGT 59.806 43.478 0.00 0.00 38.16 3.01
53 54 3.927142 GTGGATGATTTCTCGTCGAAGTT 59.073 43.478 0.00 0.00 38.16 2.66
54 55 4.389077 GTGGATGATTTCTCGTCGAAGTTT 59.611 41.667 0.00 0.00 38.16 2.66
55 56 5.575606 GTGGATGATTTCTCGTCGAAGTTTA 59.424 40.000 0.00 0.00 38.16 2.01
56 57 5.805486 TGGATGATTTCTCGTCGAAGTTTAG 59.195 40.000 0.00 0.00 38.16 1.85
57 58 6.034591 GGATGATTTCTCGTCGAAGTTTAGA 58.965 40.000 0.00 0.00 38.16 2.10
58 59 6.530534 GGATGATTTCTCGTCGAAGTTTAGAA 59.469 38.462 0.00 0.00 38.16 2.10
59 60 6.686130 TGATTTCTCGTCGAAGTTTAGAAC 57.314 37.500 0.00 0.00 32.21 3.01
60 61 5.632347 TGATTTCTCGTCGAAGTTTAGAACC 59.368 40.000 0.00 0.00 32.21 3.62
61 62 4.572985 TTCTCGTCGAAGTTTAGAACCA 57.427 40.909 0.00 0.00 0.00 3.67
62 63 4.156664 TCTCGTCGAAGTTTAGAACCAG 57.843 45.455 0.00 0.00 0.00 4.00
63 64 3.057736 TCTCGTCGAAGTTTAGAACCAGG 60.058 47.826 0.00 0.00 0.00 4.45
64 65 2.624838 TCGTCGAAGTTTAGAACCAGGT 59.375 45.455 0.00 0.00 0.00 4.00
65 66 3.820467 TCGTCGAAGTTTAGAACCAGGTA 59.180 43.478 0.00 0.00 0.00 3.08
66 67 4.460382 TCGTCGAAGTTTAGAACCAGGTAT 59.540 41.667 0.00 0.00 0.00 2.73
67 68 4.797349 CGTCGAAGTTTAGAACCAGGTATC 59.203 45.833 0.00 0.00 0.00 2.24
68 69 5.620654 CGTCGAAGTTTAGAACCAGGTATCA 60.621 44.000 0.00 0.00 0.00 2.15
69 70 5.805994 GTCGAAGTTTAGAACCAGGTATCAG 59.194 44.000 0.00 0.00 0.00 2.90
70 71 5.479375 TCGAAGTTTAGAACCAGGTATCAGT 59.521 40.000 0.00 0.00 0.00 3.41
71 72 6.660521 TCGAAGTTTAGAACCAGGTATCAGTA 59.339 38.462 0.00 0.00 0.00 2.74
72 73 6.973474 CGAAGTTTAGAACCAGGTATCAGTAG 59.027 42.308 0.00 0.00 0.00 2.57
73 74 7.148120 CGAAGTTTAGAACCAGGTATCAGTAGA 60.148 40.741 0.00 0.00 0.00 2.59
74 75 8.611051 AAGTTTAGAACCAGGTATCAGTAGAT 57.389 34.615 0.00 0.00 38.29 1.98
75 76 9.710818 AAGTTTAGAACCAGGTATCAGTAGATA 57.289 33.333 0.00 0.00 35.67 1.98
76 77 9.884814 AGTTTAGAACCAGGTATCAGTAGATAT 57.115 33.333 0.00 0.00 38.88 1.63
79 80 7.455641 AGAACCAGGTATCAGTAGATATTCG 57.544 40.000 0.00 0.00 38.88 3.34
80 81 5.646577 ACCAGGTATCAGTAGATATTCGC 57.353 43.478 0.00 0.00 38.88 4.70
81 82 5.326069 ACCAGGTATCAGTAGATATTCGCT 58.674 41.667 0.00 0.00 38.88 4.93
82 83 5.416326 ACCAGGTATCAGTAGATATTCGCTC 59.584 44.000 0.00 0.00 38.88 5.03
83 84 5.650266 CCAGGTATCAGTAGATATTCGCTCT 59.350 44.000 0.00 0.00 38.88 4.09
84 85 6.183360 CCAGGTATCAGTAGATATTCGCTCTC 60.183 46.154 0.00 0.00 38.88 3.20
85 86 5.583061 AGGTATCAGTAGATATTCGCTCTCG 59.417 44.000 0.00 0.00 38.88 4.04
86 87 5.581479 GGTATCAGTAGATATTCGCTCTCGA 59.419 44.000 0.00 0.00 39.45 4.04
87 88 6.092396 GGTATCAGTAGATATTCGCTCTCGAA 59.908 42.308 2.54 2.54 45.23 3.71
88 89 7.361031 GGTATCAGTAGATATTCGCTCTCGAAA 60.361 40.741 4.21 0.00 44.81 3.46
89 90 8.016229 GTATCAGTAGATATTCGCTCTCGAAAA 58.984 37.037 4.21 0.00 44.81 2.29
90 91 8.565416 TATCAGTAGATATTCGCTCTCGAAAAA 58.435 33.333 4.21 0.00 44.81 1.94
114 115 9.886132 AAAAAGATATCAGTAGATGTTACGGTT 57.114 29.630 5.32 0.00 35.67 4.44
115 116 8.873215 AAAGATATCAGTAGATGTTACGGTTG 57.127 34.615 5.32 0.00 35.67 3.77
116 117 7.818997 AGATATCAGTAGATGTTACGGTTGA 57.181 36.000 5.32 0.00 35.67 3.18
117 118 8.234136 AGATATCAGTAGATGTTACGGTTGAA 57.766 34.615 5.32 0.00 35.67 2.69
118 119 8.353684 AGATATCAGTAGATGTTACGGTTGAAG 58.646 37.037 5.32 0.00 35.67 3.02
119 120 5.970317 TCAGTAGATGTTACGGTTGAAGA 57.030 39.130 0.00 0.00 0.00 2.87
120 121 6.335471 TCAGTAGATGTTACGGTTGAAGAA 57.665 37.500 0.00 0.00 0.00 2.52
121 122 6.931838 TCAGTAGATGTTACGGTTGAAGAAT 58.068 36.000 0.00 0.00 0.00 2.40
122 123 7.033791 TCAGTAGATGTTACGGTTGAAGAATC 58.966 38.462 0.00 0.00 0.00 2.52
123 124 6.811665 CAGTAGATGTTACGGTTGAAGAATCA 59.188 38.462 0.00 0.00 0.00 2.57
124 125 7.330946 CAGTAGATGTTACGGTTGAAGAATCAA 59.669 37.037 0.00 0.00 43.18 2.57
137 138 6.448369 TGAAGAATCAACTCCTAAGGGAAA 57.552 37.500 0.00 0.00 35.22 3.13
139 140 6.715264 TGAAGAATCAACTCCTAAGGGAAAAC 59.285 38.462 0.00 0.00 35.22 2.43
147 148 7.829211 TCAACTCCTAAGGGAAAACTATTCATG 59.171 37.037 0.00 0.00 41.69 3.07
164 165 8.598041 ACTATTCATGATACAAATCCTAGGACC 58.402 37.037 15.42 0.00 0.00 4.46
181 182 8.720537 TCCTAGGACCTTCTTTTTCTAGAAAAA 58.279 33.333 31.43 31.43 44.98 1.94
182 183 8.784994 CCTAGGACCTTCTTTTTCTAGAAAAAC 58.215 37.037 30.56 21.75 43.08 2.43
183 184 9.338622 CTAGGACCTTCTTTTTCTAGAAAAACA 57.661 33.333 30.56 22.04 43.08 2.83
184 185 7.997482 AGGACCTTCTTTTTCTAGAAAAACAC 58.003 34.615 30.56 19.42 43.08 3.32
185 186 7.834681 AGGACCTTCTTTTTCTAGAAAAACACT 59.165 33.333 30.56 19.52 43.08 3.55
186 187 7.915923 GGACCTTCTTTTTCTAGAAAAACACTG 59.084 37.037 30.56 22.87 43.08 3.66
203 204 8.831715 AAAACACTGAATGGATTTTATGGTTC 57.168 30.769 0.00 0.00 0.00 3.62
219 220 8.980143 TTTATGGTTCCTCAAAATTCGAAATC 57.020 30.769 0.00 0.00 0.00 2.17
221 222 6.254281 TGGTTCCTCAAAATTCGAAATCTC 57.746 37.500 0.00 0.00 0.00 2.75
231 232 6.648879 AAATTCGAAATCTCAAGTGGGAAA 57.351 33.333 0.00 0.00 0.00 3.13
243 244 0.037232 GTGGGAAACTCAGGACTCCG 60.037 60.000 0.00 0.00 0.00 4.63
248 249 2.957006 GGAAACTCAGGACTCCGCTATA 59.043 50.000 0.00 0.00 0.00 1.31
252 253 4.434545 ACTCAGGACTCCGCTATACTAA 57.565 45.455 0.00 0.00 0.00 2.24
257 258 6.776744 TCAGGACTCCGCTATACTAATTCTA 58.223 40.000 0.00 0.00 0.00 2.10
258 259 6.879993 TCAGGACTCCGCTATACTAATTCTAG 59.120 42.308 0.00 0.00 0.00 2.43
321 322 7.466746 TCTAAGAAAACCCAGAATTTCATGG 57.533 36.000 0.00 3.96 37.87 3.66
327 329 7.611855 AGAAAACCCAGAATTTCATGGTACTAG 59.388 37.037 9.47 0.00 37.87 2.57
468 470 1.305046 AGTGTACTCTGGGTCCCGG 60.305 63.158 10.99 10.99 0.00 5.73
558 562 0.845337 TACCAAACGGACCCCAGTTT 59.155 50.000 0.00 0.00 40.74 2.66
627 640 9.310449 AGTTCAGAACTCCTACTTCATTTAGTA 57.690 33.333 10.27 0.00 37.02 1.82
650 663 1.065491 ACATGTTATCGCCTGCCAGAA 60.065 47.619 0.00 0.00 0.00 3.02
667 680 3.529533 CAGAAGATGAGATGGACCACAC 58.470 50.000 0.00 0.00 0.00 3.82
688 701 4.334759 CACATCAGTCAGATCCACCAAATC 59.665 45.833 0.00 0.00 33.72 2.17
730 743 0.469070 ATGAGCACTCAGGAGATGGC 59.531 55.000 6.50 4.09 43.61 4.40
1353 1373 3.749609 TCGAAAGGCTAAAAGCAAGGTAC 59.250 43.478 0.78 0.00 44.75 3.34
1389 1442 8.547173 ACTTCTCCTGAATTAGTCATCAGAAAT 58.453 33.333 4.43 0.00 44.64 2.17
1390 1443 8.954950 TTCTCCTGAATTAGTCATCAGAAATC 57.045 34.615 4.43 0.00 44.64 2.17
1392 1445 7.346698 TCTCCTGAATTAGTCATCAGAAATCCT 59.653 37.037 4.43 0.00 44.64 3.24
1393 1446 7.278135 TCCTGAATTAGTCATCAGAAATCCTG 58.722 38.462 4.43 0.00 44.64 3.86
1431 1590 8.611654 TGAAGTTATTTTCCTACTTGTACCAC 57.388 34.615 0.00 0.00 32.58 4.16
1476 1650 2.082231 CCATCATATAGCTGCTGGTGC 58.918 52.381 13.43 0.00 40.20 5.01
1490 1664 2.162408 GCTGGTGCCTTTCTGTATGTTC 59.838 50.000 0.00 0.00 0.00 3.18
1596 1777 9.459640 CTCAATGGCATAATTTGAAGTCTTATG 57.540 33.333 0.00 0.00 36.42 1.90
1640 1822 9.692325 ATCAATAAGAAAGTAGATTCTGCCTTT 57.308 29.630 10.98 10.98 39.54 3.11
1659 1841 0.684535 TCACGCTCATGAAGTTGGGA 59.315 50.000 0.00 0.00 0.00 4.37
1695 1877 1.084289 GATTTGGCAGGTACGGTGAC 58.916 55.000 0.00 0.00 0.00 3.67
1764 1946 0.255890 GGCCTGGAGGTTATCTGCAA 59.744 55.000 0.00 0.00 43.27 4.08
2028 2210 4.201851 CCACCTCGCTCTAAAATGTCATTG 60.202 45.833 0.00 0.00 0.00 2.82
2029 2211 3.941483 ACCTCGCTCTAAAATGTCATTGG 59.059 43.478 0.00 0.00 0.00 3.16
2108 2428 8.861086 ACTACTATGTTCAATTCCTCATACGAT 58.139 33.333 0.00 0.00 0.00 3.73
2109 2429 7.953158 ACTATGTTCAATTCCTCATACGATG 57.047 36.000 0.00 0.00 0.00 3.84
2110 2430 5.679734 ATGTTCAATTCCTCATACGATGC 57.320 39.130 0.00 0.00 0.00 3.91
2111 2431 3.876914 TGTTCAATTCCTCATACGATGCC 59.123 43.478 0.00 0.00 0.00 4.40
2112 2432 4.130118 GTTCAATTCCTCATACGATGCCT 58.870 43.478 0.00 0.00 0.00 4.75
2113 2433 3.995199 TCAATTCCTCATACGATGCCTC 58.005 45.455 0.00 0.00 0.00 4.70
2114 2434 3.387699 TCAATTCCTCATACGATGCCTCA 59.612 43.478 0.00 0.00 0.00 3.86
2115 2435 4.040829 TCAATTCCTCATACGATGCCTCAT 59.959 41.667 0.00 0.00 0.00 2.90
2116 2436 3.391506 TTCCTCATACGATGCCTCATG 57.608 47.619 0.00 0.00 0.00 3.07
2117 2437 1.001293 TCCTCATACGATGCCTCATGC 59.999 52.381 0.00 0.00 41.77 4.06
2118 2438 1.066136 CTCATACGATGCCTCATGCG 58.934 55.000 0.00 0.00 45.60 4.73
2119 2439 0.389025 TCATACGATGCCTCATGCGT 59.611 50.000 0.00 0.00 45.60 5.24
2380 2700 6.314896 CAGTTGGAAGTTTTAATTGGTTTGCA 59.685 34.615 0.00 0.00 0.00 4.08
2461 2781 1.470098 GCTGCACGTTTCATGGAAGAT 59.530 47.619 0.00 0.00 0.00 2.40
2566 2898 8.062536 AGAGTCTCTACAATAATACCAGAACCT 58.937 37.037 0.00 0.00 0.00 3.50
2619 2958 6.436218 TGCCTTGTATATATAGTGTGTCGGAT 59.564 38.462 0.00 0.00 0.00 4.18
2770 3110 3.146066 AGGCGCATTAGAAACACTCAAA 58.854 40.909 10.83 0.00 0.00 2.69
2772 3112 3.914364 GGCGCATTAGAAACACTCAAAAG 59.086 43.478 10.83 0.00 0.00 2.27
2904 3244 3.009723 CAGCACGTGTAATGGGAAGAAT 58.990 45.455 18.38 0.00 0.00 2.40
3052 3392 1.925185 GAGTTCGAAAGTACCCGCATC 59.075 52.381 0.00 0.00 31.02 3.91
3058 3398 2.639065 GAAAGTACCCGCATCATTGGA 58.361 47.619 0.00 0.00 0.00 3.53
3081 3421 0.893447 AGGCAATTTCTGAAGGCTGC 59.107 50.000 10.29 10.29 35.41 5.25
3122 3462 5.334182 GCTTCGGAAGAACTACAAGGAAAAG 60.334 44.000 21.45 0.00 46.92 2.27
3160 3500 6.929606 ACACTTACTTAGATTTCTCGCAACTT 59.070 34.615 0.00 0.00 0.00 2.66
3566 3907 8.656849 GTCGCTTTCTCTGAAATGTCTTAATTA 58.343 33.333 0.00 0.00 0.00 1.40
3588 3929 9.793252 AATTACAATTTCACTTAATAGCTGCTG 57.207 29.630 13.43 0.00 0.00 4.41
3589 3930 5.644644 ACAATTTCACTTAATAGCTGCTGC 58.355 37.500 13.43 7.62 40.05 5.25
3590 3931 5.183713 ACAATTTCACTTAATAGCTGCTGCA 59.816 36.000 18.42 0.88 42.74 4.41
3591 3932 6.127535 ACAATTTCACTTAATAGCTGCTGCAT 60.128 34.615 18.42 6.53 42.74 3.96
3592 3933 5.490139 TTTCACTTAATAGCTGCTGCATC 57.510 39.130 18.42 0.00 42.74 3.91
3593 3934 4.141233 TCACTTAATAGCTGCTGCATCA 57.859 40.909 18.42 2.74 42.74 3.07
3594 3935 4.711399 TCACTTAATAGCTGCTGCATCAT 58.289 39.130 18.42 5.05 42.74 2.45
3595 3936 4.753610 TCACTTAATAGCTGCTGCATCATC 59.246 41.667 18.42 0.00 42.74 2.92
3596 3937 4.514066 CACTTAATAGCTGCTGCATCATCA 59.486 41.667 18.42 0.00 42.74 3.07
3597 3938 5.008316 CACTTAATAGCTGCTGCATCATCAA 59.992 40.000 18.42 3.27 42.74 2.57
3598 3939 5.768662 ACTTAATAGCTGCTGCATCATCAAT 59.231 36.000 18.42 0.00 42.74 2.57
3599 3940 6.938596 ACTTAATAGCTGCTGCATCATCAATA 59.061 34.615 18.42 0.00 42.74 1.90
3600 3941 7.446319 ACTTAATAGCTGCTGCATCATCAATAA 59.554 33.333 18.42 4.85 42.74 1.40
3601 3942 5.881777 ATAGCTGCTGCATCATCAATAAG 57.118 39.130 18.42 0.00 42.74 1.73
3602 3943 2.885266 AGCTGCTGCATCATCAATAAGG 59.115 45.455 18.42 0.00 42.74 2.69
3603 3944 2.882761 GCTGCTGCATCATCAATAAGGA 59.117 45.455 11.11 0.00 39.41 3.36
3604 3945 3.304525 GCTGCTGCATCATCAATAAGGAC 60.305 47.826 11.11 0.00 39.41 3.85
3605 3946 3.216800 TGCTGCATCATCAATAAGGACC 58.783 45.455 0.00 0.00 0.00 4.46
3606 3947 3.216800 GCTGCATCATCAATAAGGACCA 58.783 45.455 0.00 0.00 0.00 4.02
3607 3948 3.633525 GCTGCATCATCAATAAGGACCAA 59.366 43.478 0.00 0.00 0.00 3.67
3608 3949 4.280174 GCTGCATCATCAATAAGGACCAAT 59.720 41.667 0.00 0.00 0.00 3.16
3609 3950 5.221382 GCTGCATCATCAATAAGGACCAATT 60.221 40.000 0.00 0.00 0.00 2.32
3610 3951 6.395426 TGCATCATCAATAAGGACCAATTC 57.605 37.500 0.00 0.00 0.00 2.17
3672 5744 3.118298 TCAAATCAGCACTGCATAGGCTA 60.118 43.478 3.30 0.00 41.91 3.93
3801 6284 1.452399 GTTCACTCTCGACGCTGTTTC 59.548 52.381 0.00 0.00 0.00 2.78
3825 6310 3.199946 TGGTAGAGGTGATGGGATCAAAC 59.800 47.826 0.00 0.00 41.69 2.93
3960 6524 5.576563 TTTCCTGGTCTTATTGACTTCCA 57.423 39.130 0.00 0.00 44.74 3.53
4059 7104 4.715297 AGGTATATTCCAGTTCGTCAACCT 59.285 41.667 0.78 0.00 32.22 3.50
4098 7146 2.618442 AAGTGCATGTGGGGTTTTTG 57.382 45.000 0.00 0.00 0.00 2.44
4107 7155 5.510520 GCATGTGGGGTTTTTGTCTATCAAA 60.511 40.000 0.00 0.00 43.24 2.69
4121 7180 2.572191 ATCAAAACATGGCATGCTCG 57.428 45.000 26.70 13.06 0.00 5.03
4209 7271 2.656947 TCCCACTTTGCTTTGCTAGT 57.343 45.000 0.00 0.00 0.00 2.57
4390 7772 1.630369 TGAGCTCTGCCAAACACCTAT 59.370 47.619 16.19 0.00 0.00 2.57
4397 7779 2.821969 CTGCCAAACACCTATTCTTGCT 59.178 45.455 0.00 0.00 0.00 3.91
4410 7792 1.289160 TCTTGCTGGGCAGGAGTTAT 58.711 50.000 0.30 0.00 39.64 1.89
4605 8170 2.546778 TCCAACACTCACGTTGTTCTC 58.453 47.619 1.15 0.00 43.89 2.87
4845 8422 2.509052 TGAGTGAACTTCGTGAGTGG 57.491 50.000 0.00 0.00 39.00 4.00
5056 8654 1.352083 TCTAGTCCATATGCCCCTGC 58.648 55.000 0.00 0.00 38.26 4.85
5057 8655 0.326264 CTAGTCCATATGCCCCTGCC 59.674 60.000 0.00 0.00 36.33 4.85
5058 8656 1.133809 TAGTCCATATGCCCCTGCCC 61.134 60.000 0.00 0.00 36.33 5.36
5059 8657 3.185203 TCCATATGCCCCTGCCCC 61.185 66.667 0.00 0.00 36.33 5.80
5060 8658 3.510633 CCATATGCCCCTGCCCCA 61.511 66.667 0.00 0.00 36.33 4.96
5061 8659 2.856360 CATATGCCCCTGCCCCAT 59.144 61.111 0.00 0.00 36.33 4.00
5062 8660 1.304713 CATATGCCCCTGCCCCATC 60.305 63.158 0.00 0.00 36.33 3.51
5063 8661 1.466788 ATATGCCCCTGCCCCATCT 60.467 57.895 0.00 0.00 36.33 2.90
5064 8662 1.076095 ATATGCCCCTGCCCCATCTT 61.076 55.000 0.00 0.00 36.33 2.40
5065 8663 1.295915 TATGCCCCTGCCCCATCTTT 61.296 55.000 0.00 0.00 36.33 2.52
5066 8664 2.039462 GCCCCTGCCCCATCTTTT 59.961 61.111 0.00 0.00 0.00 2.27
5067 8665 1.613332 GCCCCTGCCCCATCTTTTT 60.613 57.895 0.00 0.00 0.00 1.94
5089 8687 4.712122 TTTTCGAGAAAACACAAAGGCT 57.288 36.364 6.89 0.00 35.57 4.58
5090 8688 4.712122 TTTCGAGAAAACACAAAGGCTT 57.288 36.364 0.00 0.00 0.00 4.35
5091 8689 4.712122 TTCGAGAAAACACAAAGGCTTT 57.288 36.364 6.68 6.68 0.00 3.51
5092 8690 4.027572 TCGAGAAAACACAAAGGCTTTG 57.972 40.909 32.52 32.52 45.95 2.77
5093 8691 2.535574 CGAGAAAACACAAAGGCTTTGC 59.464 45.455 33.69 19.25 44.39 3.68
5094 8692 2.535574 GAGAAAACACAAAGGCTTTGCG 59.464 45.455 33.69 28.17 44.39 4.85
5095 8693 2.094234 AGAAAACACAAAGGCTTTGCGT 60.094 40.909 33.69 28.80 44.39 5.24
5096 8694 2.378445 AAACACAAAGGCTTTGCGTT 57.622 40.000 30.51 30.51 44.94 4.84
5097 8695 2.378445 AACACAAAGGCTTTGCGTTT 57.622 40.000 30.51 21.71 41.58 3.60
5098 8696 1.921243 ACACAAAGGCTTTGCGTTTC 58.079 45.000 33.69 0.00 43.26 2.78
5099 8697 1.476488 ACACAAAGGCTTTGCGTTTCT 59.524 42.857 33.69 15.04 43.26 2.52
5100 8698 2.094234 ACACAAAGGCTTTGCGTTTCTT 60.094 40.909 33.69 14.36 43.26 2.52
5101 8699 2.929398 CACAAAGGCTTTGCGTTTCTTT 59.071 40.909 33.69 13.68 43.26 2.52
5102 8700 3.370672 CACAAAGGCTTTGCGTTTCTTTT 59.629 39.130 33.69 13.01 43.26 2.27
5103 8701 3.616821 ACAAAGGCTTTGCGTTTCTTTTC 59.383 39.130 33.69 0.00 43.26 2.29
5104 8702 3.518634 AAGGCTTTGCGTTTCTTTTCA 57.481 38.095 0.00 0.00 32.59 2.69
5105 8703 3.733443 AGGCTTTGCGTTTCTTTTCAT 57.267 38.095 0.00 0.00 0.00 2.57
5106 8704 4.058721 AGGCTTTGCGTTTCTTTTCATT 57.941 36.364 0.00 0.00 0.00 2.57
5107 8705 3.803778 AGGCTTTGCGTTTCTTTTCATTG 59.196 39.130 0.00 0.00 0.00 2.82
5108 8706 3.801594 GGCTTTGCGTTTCTTTTCATTGA 59.198 39.130 0.00 0.00 0.00 2.57
5109 8707 4.084900 GGCTTTGCGTTTCTTTTCATTGAG 60.085 41.667 0.00 0.00 0.00 3.02
5110 8708 4.739716 GCTTTGCGTTTCTTTTCATTGAGA 59.260 37.500 0.00 0.00 0.00 3.27
5111 8709 5.231991 GCTTTGCGTTTCTTTTCATTGAGAA 59.768 36.000 0.00 0.00 0.00 2.87
5112 8710 6.560983 GCTTTGCGTTTCTTTTCATTGAGAAG 60.561 38.462 10.01 10.01 37.57 2.85
5113 8711 5.499139 TGCGTTTCTTTTCATTGAGAAGT 57.501 34.783 14.55 0.00 37.57 3.01
5114 8712 5.273170 TGCGTTTCTTTTCATTGAGAAGTG 58.727 37.500 14.55 6.78 37.57 3.16
5115 8713 4.676924 GCGTTTCTTTTCATTGAGAAGTGG 59.323 41.667 14.55 6.11 37.57 4.00
5116 8714 5.215160 CGTTTCTTTTCATTGAGAAGTGGG 58.785 41.667 14.55 2.74 37.57 4.61
5117 8715 5.532557 GTTTCTTTTCATTGAGAAGTGGGG 58.467 41.667 14.55 0.00 37.57 4.96
5118 8716 3.766545 TCTTTTCATTGAGAAGTGGGGG 58.233 45.455 14.55 0.00 37.57 5.40
5119 8717 3.397618 TCTTTTCATTGAGAAGTGGGGGA 59.602 43.478 14.55 0.00 37.57 4.81
5120 8718 3.893753 TTTCATTGAGAAGTGGGGGAA 57.106 42.857 0.00 0.00 37.57 3.97
5121 8719 2.879103 TCATTGAGAAGTGGGGGAAC 57.121 50.000 0.00 0.00 0.00 3.62
5122 8720 2.061848 TCATTGAGAAGTGGGGGAACA 58.938 47.619 0.00 0.00 0.00 3.18
5123 8721 2.445145 TCATTGAGAAGTGGGGGAACAA 59.555 45.455 0.00 0.00 0.00 2.83
5124 8722 2.656947 TTGAGAAGTGGGGGAACAAG 57.343 50.000 0.00 0.00 0.00 3.16
5125 8723 1.518367 TGAGAAGTGGGGGAACAAGT 58.482 50.000 0.00 0.00 0.00 3.16
5126 8724 1.850345 TGAGAAGTGGGGGAACAAGTT 59.150 47.619 0.00 0.00 0.00 2.66
5127 8725 3.050089 TGAGAAGTGGGGGAACAAGTTA 58.950 45.455 0.00 0.00 0.00 2.24
5128 8726 3.181448 TGAGAAGTGGGGGAACAAGTTAC 60.181 47.826 0.00 0.00 0.00 2.50
5129 8727 2.781174 AGAAGTGGGGGAACAAGTTACA 59.219 45.455 0.00 0.00 0.00 2.41
5130 8728 3.397955 AGAAGTGGGGGAACAAGTTACAT 59.602 43.478 0.00 0.00 0.00 2.29
5131 8729 3.154827 AGTGGGGGAACAAGTTACATG 57.845 47.619 0.00 0.00 0.00 3.21
5132 8730 1.544246 GTGGGGGAACAAGTTACATGC 59.456 52.381 0.00 0.00 0.00 4.06
5133 8731 1.182667 GGGGGAACAAGTTACATGCC 58.817 55.000 0.00 0.00 0.00 4.40
5134 8732 1.272480 GGGGGAACAAGTTACATGCCT 60.272 52.381 0.00 0.00 0.00 4.75
5135 8733 2.092323 GGGGAACAAGTTACATGCCTC 58.908 52.381 0.00 0.00 0.00 4.70
5136 8734 2.092323 GGGAACAAGTTACATGCCTCC 58.908 52.381 0.00 2.00 0.00 4.30
5137 8735 2.290960 GGGAACAAGTTACATGCCTCCT 60.291 50.000 8.51 0.00 0.00 3.69
5138 8736 3.054655 GGGAACAAGTTACATGCCTCCTA 60.055 47.826 8.51 0.00 0.00 2.94
5139 8737 4.192317 GGAACAAGTTACATGCCTCCTAG 58.808 47.826 0.00 0.00 0.00 3.02
5140 8738 3.914426 ACAAGTTACATGCCTCCTAGG 57.086 47.619 0.82 0.82 38.80 3.02
5141 8739 3.450904 ACAAGTTACATGCCTCCTAGGA 58.549 45.455 11.98 11.98 37.67 2.94
5142 8740 3.452627 ACAAGTTACATGCCTCCTAGGAG 59.547 47.826 29.27 29.27 37.67 3.69
5151 8749 3.863407 CTCCTAGGAGGTGGTTTGC 57.137 57.895 28.68 0.00 38.51 3.68
5152 8750 0.984230 CTCCTAGGAGGTGGTTTGCA 59.016 55.000 28.68 0.00 38.51 4.08
5153 8751 0.984230 TCCTAGGAGGTGGTTTGCAG 59.016 55.000 7.62 0.00 36.53 4.41
5154 8752 0.693049 CCTAGGAGGTGGTTTGCAGT 59.307 55.000 1.05 0.00 0.00 4.40
5155 8753 1.073923 CCTAGGAGGTGGTTTGCAGTT 59.926 52.381 1.05 0.00 0.00 3.16
5156 8754 2.489073 CCTAGGAGGTGGTTTGCAGTTT 60.489 50.000 1.05 0.00 0.00 2.66
5157 8755 3.244770 CCTAGGAGGTGGTTTGCAGTTTA 60.245 47.826 1.05 0.00 0.00 2.01
5158 8756 3.525800 AGGAGGTGGTTTGCAGTTTAT 57.474 42.857 0.00 0.00 0.00 1.40
5159 8757 3.157087 AGGAGGTGGTTTGCAGTTTATG 58.843 45.455 0.00 0.00 0.00 1.90
5160 8758 2.890945 GGAGGTGGTTTGCAGTTTATGT 59.109 45.455 0.00 0.00 0.00 2.29
5161 8759 3.320826 GGAGGTGGTTTGCAGTTTATGTT 59.679 43.478 0.00 0.00 0.00 2.71
5162 8760 4.521256 GGAGGTGGTTTGCAGTTTATGTTA 59.479 41.667 0.00 0.00 0.00 2.41
5163 8761 5.447624 AGGTGGTTTGCAGTTTATGTTAC 57.552 39.130 0.00 0.00 0.00 2.50
5164 8762 4.890581 AGGTGGTTTGCAGTTTATGTTACA 59.109 37.500 0.00 0.00 0.00 2.41
5165 8763 5.361285 AGGTGGTTTGCAGTTTATGTTACAA 59.639 36.000 0.00 0.00 0.00 2.41
5166 8764 6.041523 AGGTGGTTTGCAGTTTATGTTACAAT 59.958 34.615 0.00 0.00 0.00 2.71
5167 8765 6.145371 GGTGGTTTGCAGTTTATGTTACAATG 59.855 38.462 0.00 0.00 0.00 2.82
5168 8766 6.920758 GTGGTTTGCAGTTTATGTTACAATGA 59.079 34.615 0.00 0.00 0.00 2.57
5169 8767 7.598493 GTGGTTTGCAGTTTATGTTACAATGAT 59.402 33.333 0.00 0.00 0.00 2.45
5170 8768 7.812191 TGGTTTGCAGTTTATGTTACAATGATC 59.188 33.333 0.00 0.00 0.00 2.92
5171 8769 8.028938 GGTTTGCAGTTTATGTTACAATGATCT 58.971 33.333 0.00 0.00 0.00 2.75
5172 8770 9.410556 GTTTGCAGTTTATGTTACAATGATCTT 57.589 29.630 0.00 0.00 0.00 2.40
5175 8773 9.448438 TGCAGTTTATGTTACAATGATCTTAGT 57.552 29.630 0.00 0.00 0.00 2.24
5176 8774 9.708222 GCAGTTTATGTTACAATGATCTTAGTG 57.292 33.333 0.00 0.00 0.00 2.74
5180 8778 9.952030 TTTATGTTACAATGATCTTAGTGGACA 57.048 29.630 0.00 0.98 0.00 4.02
5182 8780 8.668510 ATGTTACAATGATCTTAGTGGACATC 57.331 34.615 0.00 0.00 27.93 3.06
5183 8781 7.047891 TGTTACAATGATCTTAGTGGACATCC 58.952 38.462 0.00 0.00 0.00 3.51
5184 8782 5.041191 ACAATGATCTTAGTGGACATCCC 57.959 43.478 0.00 0.00 34.29 3.85
5185 8783 4.474651 ACAATGATCTTAGTGGACATCCCA 59.525 41.667 0.00 0.00 44.25 4.37
5192 8790 4.908333 TGGACATCCCAGGTGCTA 57.092 55.556 0.00 0.00 40.82 3.49
5193 8791 2.607811 TGGACATCCCAGGTGCTAG 58.392 57.895 0.00 0.00 40.82 3.42
5194 8792 0.982852 TGGACATCCCAGGTGCTAGG 60.983 60.000 0.00 0.00 40.82 3.02
5195 8793 1.700042 GGACATCCCAGGTGCTAGGG 61.700 65.000 0.00 0.00 46.90 3.53
5206 8804 1.871080 GTGCTAGGGATCACCAATCG 58.129 55.000 0.00 0.00 43.89 3.34
5207 8805 0.758734 TGCTAGGGATCACCAATCGG 59.241 55.000 0.00 0.00 43.89 4.18
5208 8806 1.048601 GCTAGGGATCACCAATCGGA 58.951 55.000 0.00 0.00 43.89 4.55
5209 8807 1.001406 GCTAGGGATCACCAATCGGAG 59.999 57.143 0.00 0.00 43.89 4.63
5210 8808 1.620819 CTAGGGATCACCAATCGGAGG 59.379 57.143 0.00 0.00 43.89 4.30
5211 8809 1.227973 GGGATCACCAATCGGAGGC 60.228 63.158 0.00 0.00 39.85 4.70
5212 8810 1.700042 GGGATCACCAATCGGAGGCT 61.700 60.000 0.00 0.00 39.85 4.58
5213 8811 0.181350 GGATCACCAATCGGAGGCTT 59.819 55.000 0.00 0.00 34.99 4.35
5214 8812 1.303309 GATCACCAATCGGAGGCTTG 58.697 55.000 0.00 0.00 35.59 4.01
5215 8813 0.911769 ATCACCAATCGGAGGCTTGA 59.088 50.000 0.00 0.00 35.59 3.02
5216 8814 0.690192 TCACCAATCGGAGGCTTGAA 59.310 50.000 0.00 0.00 35.59 2.69
5217 8815 1.089920 CACCAATCGGAGGCTTGAAG 58.910 55.000 0.00 0.00 35.59 3.02
5218 8816 0.678048 ACCAATCGGAGGCTTGAAGC 60.678 55.000 9.04 9.04 36.85 3.86
5247 8845 2.111878 CCCATAAGGCGGCCTCTG 59.888 66.667 24.08 21.24 30.89 3.35
5248 8846 2.592861 CCATAAGGCGGCCTCTGC 60.593 66.667 24.08 0.00 30.89 4.26
5249 8847 2.507944 CATAAGGCGGCCTCTGCT 59.492 61.111 24.08 9.29 37.74 4.24
5250 8848 1.153086 CATAAGGCGGCCTCTGCTT 60.153 57.895 24.08 8.87 37.74 3.91
5251 8849 0.749454 CATAAGGCGGCCTCTGCTTT 60.749 55.000 24.08 8.04 37.74 3.51
5252 8850 0.837272 ATAAGGCGGCCTCTGCTTTA 59.163 50.000 24.08 10.27 38.11 1.85
5253 8851 0.616371 TAAGGCGGCCTCTGCTTTAA 59.384 50.000 24.08 0.00 37.74 1.52
5254 8852 0.034089 AAGGCGGCCTCTGCTTTAAT 60.034 50.000 24.08 0.00 37.74 1.40
5255 8853 0.034089 AGGCGGCCTCTGCTTTAATT 60.034 50.000 17.69 0.00 37.74 1.40
5256 8854 0.382158 GGCGGCCTCTGCTTTAATTC 59.618 55.000 12.87 0.00 37.74 2.17
5257 8855 1.383523 GCGGCCTCTGCTTTAATTCT 58.616 50.000 0.00 0.00 37.74 2.40
5258 8856 1.332065 GCGGCCTCTGCTTTAATTCTC 59.668 52.381 0.00 0.00 37.74 2.87
5259 8857 2.911484 CGGCCTCTGCTTTAATTCTCT 58.089 47.619 0.00 0.00 37.74 3.10
5260 8858 2.869192 CGGCCTCTGCTTTAATTCTCTC 59.131 50.000 0.00 0.00 37.74 3.20
5261 8859 3.431486 CGGCCTCTGCTTTAATTCTCTCT 60.431 47.826 0.00 0.00 37.74 3.10
5262 8860 3.876320 GGCCTCTGCTTTAATTCTCTCTG 59.124 47.826 0.00 0.00 37.74 3.35
5263 8861 4.512484 GCCTCTGCTTTAATTCTCTCTGT 58.488 43.478 0.00 0.00 33.53 3.41
5264 8862 4.940654 GCCTCTGCTTTAATTCTCTCTGTT 59.059 41.667 0.00 0.00 33.53 3.16
5265 8863 6.109359 GCCTCTGCTTTAATTCTCTCTGTTA 58.891 40.000 0.00 0.00 33.53 2.41
5266 8864 6.257630 GCCTCTGCTTTAATTCTCTCTGTTAG 59.742 42.308 0.00 0.00 33.53 2.34
5267 8865 6.257630 CCTCTGCTTTAATTCTCTCTGTTAGC 59.742 42.308 0.00 0.00 0.00 3.09
5268 8866 6.940739 TCTGCTTTAATTCTCTCTGTTAGCT 58.059 36.000 0.00 0.00 0.00 3.32
5269 8867 6.815641 TCTGCTTTAATTCTCTCTGTTAGCTG 59.184 38.462 0.00 0.00 0.00 4.24
5270 8868 5.877012 TGCTTTAATTCTCTCTGTTAGCTGG 59.123 40.000 0.00 0.00 0.00 4.85
5271 8869 5.877564 GCTTTAATTCTCTCTGTTAGCTGGT 59.122 40.000 0.00 0.00 0.00 4.00
5272 8870 6.183360 GCTTTAATTCTCTCTGTTAGCTGGTG 60.183 42.308 0.00 0.00 0.00 4.17
5273 8871 3.902881 ATTCTCTCTGTTAGCTGGTGG 57.097 47.619 0.00 0.00 0.00 4.61
5274 8872 2.604912 TCTCTCTGTTAGCTGGTGGA 57.395 50.000 0.00 0.00 0.00 4.02
5275 8873 2.171840 TCTCTCTGTTAGCTGGTGGAC 58.828 52.381 0.00 0.00 0.00 4.02
5276 8874 2.175202 CTCTCTGTTAGCTGGTGGACT 58.825 52.381 0.00 0.00 0.00 3.85
5277 8875 1.895798 TCTCTGTTAGCTGGTGGACTG 59.104 52.381 0.00 0.00 0.00 3.51
5278 8876 1.895798 CTCTGTTAGCTGGTGGACTGA 59.104 52.381 0.00 0.00 0.00 3.41
5279 8877 2.499289 CTCTGTTAGCTGGTGGACTGAT 59.501 50.000 0.00 0.00 0.00 2.90
5280 8878 2.234661 TCTGTTAGCTGGTGGACTGATG 59.765 50.000 0.00 0.00 0.00 3.07
5281 8879 1.278985 TGTTAGCTGGTGGACTGATGG 59.721 52.381 0.00 0.00 0.00 3.51
5282 8880 1.279271 GTTAGCTGGTGGACTGATGGT 59.721 52.381 0.00 0.00 0.00 3.55
5283 8881 1.656587 TAGCTGGTGGACTGATGGTT 58.343 50.000 0.00 0.00 0.00 3.67
5284 8882 0.037303 AGCTGGTGGACTGATGGTTG 59.963 55.000 0.00 0.00 0.00 3.77
5285 8883 0.036732 GCTGGTGGACTGATGGTTGA 59.963 55.000 0.00 0.00 0.00 3.18
5597 9490 7.639039 TGAATAATTCGTTGGAGTGAATATGC 58.361 34.615 0.00 0.00 33.85 3.14
5675 9569 5.360714 TCAAGAATTTCAGAAACTTGCCACT 59.639 36.000 16.37 1.18 35.35 4.00
6122 16092 4.380531 TGATAGGGTCGATTGAGCATTTC 58.619 43.478 14.02 11.52 44.47 2.17
6249 16227 6.826741 AGCGTGTACATTAGGGAAAATACATT 59.173 34.615 0.00 0.00 30.03 2.71
6448 16437 2.833943 GGATTGGGCAAATTTGGACTCT 59.166 45.455 19.47 0.00 0.00 3.24
6601 16754 1.012086 CTGTTCGCATCATGTGAGGG 58.988 55.000 0.21 0.00 38.23 4.30
6614 16767 0.958876 GTGAGGGTTACCGCCTTTGG 60.959 60.000 0.00 0.00 43.47 3.28
6630 16784 2.434359 GGGTGCTGGCTACGTGAC 60.434 66.667 0.00 0.00 0.00 3.67
6682 16836 5.599656 ACTGACATAATTCATGGGAAATGGG 59.400 40.000 0.00 0.00 39.13 4.00
6687 16841 8.795899 ACATAATTCATGGGAAATGGGAAATA 57.204 30.769 0.00 0.00 39.13 1.40
6717 16876 0.537188 GCCTGGCACTAGAGTAGCAA 59.463 55.000 15.17 0.00 0.00 3.91
6727 16886 5.447010 GCACTAGAGTAGCAATTTCAAGCAG 60.447 44.000 0.00 0.00 0.00 4.24
6769 17501 4.520492 AGAGTAGCATTTCAAACACAAGGG 59.480 41.667 0.00 0.00 0.00 3.95
6850 17611 5.573282 CGTGTTGTTAAGTCATCTGGTAGAG 59.427 44.000 0.00 0.00 0.00 2.43
6851 17612 6.569801 CGTGTTGTTAAGTCATCTGGTAGAGA 60.570 42.308 0.00 0.00 34.25 3.10
6852 17613 6.586844 GTGTTGTTAAGTCATCTGGTAGAGAC 59.413 42.308 0.00 0.00 31.75 3.36
6853 17614 6.266786 TGTTGTTAAGTCATCTGGTAGAGACA 59.733 38.462 0.00 0.00 31.75 3.41
6854 17615 6.268825 TGTTAAGTCATCTGGTAGAGACAC 57.731 41.667 0.00 0.00 31.75 3.67
6855 17616 6.010850 TGTTAAGTCATCTGGTAGAGACACT 58.989 40.000 0.00 0.00 31.75 3.55
6856 17617 6.493802 TGTTAAGTCATCTGGTAGAGACACTT 59.506 38.462 0.00 0.00 39.22 3.16
6857 17618 7.015292 TGTTAAGTCATCTGGTAGAGACACTTT 59.985 37.037 0.00 0.00 37.88 2.66
6858 17619 6.426646 AAGTCATCTGGTAGAGACACTTTT 57.573 37.500 0.00 0.00 35.13 2.27
6859 17620 5.788450 AGTCATCTGGTAGAGACACTTTTG 58.212 41.667 0.00 0.00 31.75 2.44
6860 17621 5.305644 AGTCATCTGGTAGAGACACTTTTGT 59.694 40.000 0.00 0.00 39.32 2.83
6874 17635 6.875948 ACACTTTTGTCATGCATACTTACA 57.124 33.333 0.00 0.00 0.00 2.41
6875 17636 7.452880 ACACTTTTGTCATGCATACTTACAT 57.547 32.000 0.00 0.00 0.00 2.29
6876 17637 7.307694 ACACTTTTGTCATGCATACTTACATG 58.692 34.615 0.00 0.00 44.05 3.21
6884 17645 7.486802 TCATGCATACTTACATGATGAACTG 57.513 36.000 0.00 0.00 45.79 3.16
6885 17646 7.274447 TCATGCATACTTACATGATGAACTGA 58.726 34.615 0.00 0.00 45.79 3.41
6907 17703 8.043710 ACTGAGACACTATTTTCCTCCTTTATG 58.956 37.037 0.00 0.00 0.00 1.90
6954 17865 4.871933 GGAAATTTCCACCACTCATGTT 57.128 40.909 28.76 0.00 46.76 2.71
6969 17880 3.916761 TCATGTTTGCTCATCTTTTGGC 58.083 40.909 0.00 0.00 0.00 4.52
7035 17946 2.744202 GTGAATCGCAAGTCCTGAATGT 59.256 45.455 0.00 0.00 39.48 2.71
7088 17999 3.253432 GTCAATGAAGTTGTCACCCTTCC 59.747 47.826 8.33 0.00 39.72 3.46
7132 18043 3.925913 CCCATTTCATGCAGTTTTAACCG 59.074 43.478 0.00 0.00 0.00 4.44
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.476007 ATCTAGCACCCCAGATCCGC 61.476 60.000 0.00 0.00 0.00 5.54
1 2 1.051812 AATCTAGCACCCCAGATCCG 58.948 55.000 0.00 0.00 31.10 4.18
2 3 3.217626 CAAAATCTAGCACCCCAGATCC 58.782 50.000 0.00 0.00 31.10 3.36
3 4 3.629398 CACAAAATCTAGCACCCCAGATC 59.371 47.826 0.00 0.00 31.10 2.75
4 5 3.624777 CACAAAATCTAGCACCCCAGAT 58.375 45.455 0.00 0.00 32.85 2.90
5 6 2.879756 GCACAAAATCTAGCACCCCAGA 60.880 50.000 0.00 0.00 0.00 3.86
7 8 1.075374 AGCACAAAATCTAGCACCCCA 59.925 47.619 0.00 0.00 0.00 4.96
8 9 1.745653 GAGCACAAAATCTAGCACCCC 59.254 52.381 0.00 0.00 0.00 4.95
9 10 1.745653 GGAGCACAAAATCTAGCACCC 59.254 52.381 0.00 0.00 32.56 4.61
10 11 2.421424 CTGGAGCACAAAATCTAGCACC 59.579 50.000 0.00 0.00 38.08 5.01
11 12 3.077359 ACTGGAGCACAAAATCTAGCAC 58.923 45.455 0.00 0.00 0.00 4.40
12 13 3.076621 CACTGGAGCACAAAATCTAGCA 58.923 45.455 0.00 0.00 0.00 3.49
13 14 2.421424 CCACTGGAGCACAAAATCTAGC 59.579 50.000 0.00 0.00 0.00 3.42
14 15 3.942829 TCCACTGGAGCACAAAATCTAG 58.057 45.455 0.00 0.00 0.00 2.43
15 16 4.019411 TCATCCACTGGAGCACAAAATCTA 60.019 41.667 3.62 0.00 34.05 1.98
16 17 2.957402 TCCACTGGAGCACAAAATCT 57.043 45.000 0.00 0.00 0.00 2.40
17 18 3.084039 TCATCCACTGGAGCACAAAATC 58.916 45.455 3.62 0.00 34.05 2.17
18 19 3.159213 TCATCCACTGGAGCACAAAAT 57.841 42.857 3.62 0.00 34.05 1.82
19 20 2.655090 TCATCCACTGGAGCACAAAA 57.345 45.000 3.62 0.00 34.05 2.44
20 21 2.885135 ATCATCCACTGGAGCACAAA 57.115 45.000 3.62 0.00 34.05 2.83
21 22 2.885135 AATCATCCACTGGAGCACAA 57.115 45.000 3.62 0.00 34.05 3.33
22 23 2.306805 AGAAATCATCCACTGGAGCACA 59.693 45.455 3.62 0.00 34.05 4.57
23 24 2.941720 GAGAAATCATCCACTGGAGCAC 59.058 50.000 3.62 0.00 34.05 4.40
24 25 2.419159 CGAGAAATCATCCACTGGAGCA 60.419 50.000 3.62 0.00 34.05 4.26
25 26 2.208431 CGAGAAATCATCCACTGGAGC 58.792 52.381 3.62 0.00 34.05 4.70
26 27 3.452474 GACGAGAAATCATCCACTGGAG 58.548 50.000 3.62 0.00 34.05 3.86
27 28 2.159240 CGACGAGAAATCATCCACTGGA 60.159 50.000 0.00 0.00 35.55 3.86
28 29 2.159240 TCGACGAGAAATCATCCACTGG 60.159 50.000 0.00 0.00 0.00 4.00
29 30 3.150848 TCGACGAGAAATCATCCACTG 57.849 47.619 0.00 0.00 0.00 3.66
30 31 3.193691 ACTTCGACGAGAAATCATCCACT 59.806 43.478 0.00 0.00 38.57 4.00
31 32 3.512680 ACTTCGACGAGAAATCATCCAC 58.487 45.455 0.00 0.00 38.57 4.02
32 33 3.868757 ACTTCGACGAGAAATCATCCA 57.131 42.857 0.00 0.00 38.57 3.41
33 34 6.034591 TCTAAACTTCGACGAGAAATCATCC 58.965 40.000 0.00 0.00 38.57 3.51
34 35 7.384886 GTTCTAAACTTCGACGAGAAATCATC 58.615 38.462 0.00 0.00 38.57 2.92
35 36 6.310711 GGTTCTAAACTTCGACGAGAAATCAT 59.689 38.462 0.00 0.00 38.57 2.45
36 37 5.632347 GGTTCTAAACTTCGACGAGAAATCA 59.368 40.000 0.00 0.00 38.57 2.57
37 38 5.632347 TGGTTCTAAACTTCGACGAGAAATC 59.368 40.000 0.00 0.00 38.57 2.17
38 39 5.535333 TGGTTCTAAACTTCGACGAGAAAT 58.465 37.500 0.00 0.00 38.57 2.17
39 40 4.935702 TGGTTCTAAACTTCGACGAGAAA 58.064 39.130 0.00 0.00 38.57 2.52
40 41 4.543692 CTGGTTCTAAACTTCGACGAGAA 58.456 43.478 0.00 0.00 37.31 2.87
41 42 3.057736 CCTGGTTCTAAACTTCGACGAGA 60.058 47.826 0.00 0.00 0.00 4.04
42 43 3.243336 CCTGGTTCTAAACTTCGACGAG 58.757 50.000 0.00 0.00 0.00 4.18
43 44 2.624838 ACCTGGTTCTAAACTTCGACGA 59.375 45.455 0.00 0.00 0.00 4.20
44 45 3.022607 ACCTGGTTCTAAACTTCGACG 57.977 47.619 0.00 0.00 0.00 5.12
45 46 5.717119 TGATACCTGGTTCTAAACTTCGAC 58.283 41.667 3.84 0.00 0.00 4.20
46 47 5.479375 ACTGATACCTGGTTCTAAACTTCGA 59.521 40.000 3.84 0.00 0.00 3.71
47 48 5.721232 ACTGATACCTGGTTCTAAACTTCG 58.279 41.667 3.84 0.00 0.00 3.79
48 49 8.064336 TCTACTGATACCTGGTTCTAAACTTC 57.936 38.462 3.84 0.00 0.00 3.01
49 50 8.611051 ATCTACTGATACCTGGTTCTAAACTT 57.389 34.615 3.84 0.00 0.00 2.66
50 51 9.884814 ATATCTACTGATACCTGGTTCTAAACT 57.115 33.333 3.84 0.00 37.92 2.66
53 54 9.011095 CGAATATCTACTGATACCTGGTTCTAA 57.989 37.037 3.84 0.00 37.92 2.10
54 55 7.120873 GCGAATATCTACTGATACCTGGTTCTA 59.879 40.741 3.84 0.00 37.92 2.10
55 56 6.071840 GCGAATATCTACTGATACCTGGTTCT 60.072 42.308 3.84 0.00 37.92 3.01
56 57 6.071840 AGCGAATATCTACTGATACCTGGTTC 60.072 42.308 3.84 3.37 37.92 3.62
57 58 5.775701 AGCGAATATCTACTGATACCTGGTT 59.224 40.000 3.84 0.00 37.92 3.67
58 59 5.326069 AGCGAATATCTACTGATACCTGGT 58.674 41.667 4.05 4.05 37.92 4.00
59 60 5.650266 AGAGCGAATATCTACTGATACCTGG 59.350 44.000 0.00 0.00 37.92 4.45
60 61 6.456315 CGAGAGCGAATATCTACTGATACCTG 60.456 46.154 0.00 0.00 37.57 4.00
61 62 5.583061 CGAGAGCGAATATCTACTGATACCT 59.417 44.000 0.00 0.00 37.57 3.08
62 63 5.581479 TCGAGAGCGAATATCTACTGATACC 59.419 44.000 0.00 0.00 44.78 2.73
63 64 6.650239 TCGAGAGCGAATATCTACTGATAC 57.350 41.667 0.00 0.00 44.78 2.24
88 89 9.886132 AACCGTAACATCTACTGATATCTTTTT 57.114 29.630 3.98 0.00 0.00 1.94
89 90 9.314321 CAACCGTAACATCTACTGATATCTTTT 57.686 33.333 3.98 0.00 0.00 2.27
90 91 8.692710 TCAACCGTAACATCTACTGATATCTTT 58.307 33.333 3.98 0.00 0.00 2.52
91 92 8.234136 TCAACCGTAACATCTACTGATATCTT 57.766 34.615 3.98 0.00 0.00 2.40
92 93 7.818997 TCAACCGTAACATCTACTGATATCT 57.181 36.000 3.98 0.00 0.00 1.98
93 94 8.350722 TCTTCAACCGTAACATCTACTGATATC 58.649 37.037 0.00 0.00 0.00 1.63
94 95 8.234136 TCTTCAACCGTAACATCTACTGATAT 57.766 34.615 0.00 0.00 0.00 1.63
95 96 7.634671 TCTTCAACCGTAACATCTACTGATA 57.365 36.000 0.00 0.00 0.00 2.15
96 97 6.525578 TCTTCAACCGTAACATCTACTGAT 57.474 37.500 0.00 0.00 0.00 2.90
97 98 5.970317 TCTTCAACCGTAACATCTACTGA 57.030 39.130 0.00 0.00 0.00 3.41
98 99 6.811665 TGATTCTTCAACCGTAACATCTACTG 59.188 38.462 0.00 0.00 0.00 2.74
99 100 6.931838 TGATTCTTCAACCGTAACATCTACT 58.068 36.000 0.00 0.00 0.00 2.57
100 101 7.591006 TTGATTCTTCAACCGTAACATCTAC 57.409 36.000 0.00 0.00 36.94 2.59
113 114 6.448369 TTCCCTTAGGAGTTGATTCTTCAA 57.552 37.500 0.00 0.00 45.19 2.69
114 115 6.448369 TTTCCCTTAGGAGTTGATTCTTCA 57.552 37.500 0.00 0.00 45.19 3.02
115 116 6.943146 AGTTTTCCCTTAGGAGTTGATTCTTC 59.057 38.462 0.00 0.00 45.19 2.87
116 117 6.853490 AGTTTTCCCTTAGGAGTTGATTCTT 58.147 36.000 0.00 0.00 45.19 2.52
117 118 6.455690 AGTTTTCCCTTAGGAGTTGATTCT 57.544 37.500 0.00 0.00 45.19 2.40
118 119 8.809468 AATAGTTTTCCCTTAGGAGTTGATTC 57.191 34.615 0.00 0.00 45.19 2.52
119 120 8.390921 TGAATAGTTTTCCCTTAGGAGTTGATT 58.609 33.333 0.00 0.00 45.19 2.57
120 121 7.928873 TGAATAGTTTTCCCTTAGGAGTTGAT 58.071 34.615 0.00 0.00 45.19 2.57
121 122 7.324388 TGAATAGTTTTCCCTTAGGAGTTGA 57.676 36.000 0.00 0.00 45.19 3.18
122 123 7.829211 TCATGAATAGTTTTCCCTTAGGAGTTG 59.171 37.037 0.00 0.00 45.19 3.16
123 124 7.928873 TCATGAATAGTTTTCCCTTAGGAGTT 58.071 34.615 0.00 0.00 45.19 3.01
124 125 7.510675 TCATGAATAGTTTTCCCTTAGGAGT 57.489 36.000 0.00 0.00 45.19 3.85
127 128 9.627123 TTGTATCATGAATAGTTTTCCCTTAGG 57.373 33.333 0.00 0.00 0.00 2.69
139 140 8.820831 AGGTCCTAGGATTTGTATCATGAATAG 58.179 37.037 16.27 0.00 32.09 1.73
147 148 8.809468 AAAAAGAAGGTCCTAGGATTTGTATC 57.191 34.615 16.27 8.11 0.00 2.24
181 182 6.256053 AGGAACCATAAAATCCATTCAGTGT 58.744 36.000 0.00 0.00 35.62 3.55
182 183 6.377996 TGAGGAACCATAAAATCCATTCAGTG 59.622 38.462 0.00 0.00 35.62 3.66
183 184 6.493166 TGAGGAACCATAAAATCCATTCAGT 58.507 36.000 0.00 0.00 35.62 3.41
184 185 7.408756 TTGAGGAACCATAAAATCCATTCAG 57.591 36.000 0.00 0.00 35.62 3.02
185 186 7.789202 TTTGAGGAACCATAAAATCCATTCA 57.211 32.000 0.00 0.00 35.62 2.57
186 187 9.671279 AATTTTGAGGAACCATAAAATCCATTC 57.329 29.630 13.88 0.00 35.62 2.67
196 197 7.609918 TGAGATTTCGAATTTTGAGGAACCATA 59.390 33.333 0.00 0.00 0.00 2.74
203 204 6.088824 CCACTTGAGATTTCGAATTTTGAGG 58.911 40.000 0.00 0.00 0.00 3.86
219 220 2.370189 AGTCCTGAGTTTCCCACTTGAG 59.630 50.000 0.00 0.00 35.01 3.02
221 222 2.551071 GGAGTCCTGAGTTTCCCACTTG 60.551 54.545 0.41 0.00 35.01 3.16
231 232 4.434545 TTAGTATAGCGGAGTCCTGAGT 57.565 45.455 7.77 0.00 0.00 3.41
356 358 8.508875 GGAAAAATCATGAAATTTGCTCAATGT 58.491 29.630 15.98 0.00 0.00 2.71
468 470 1.374343 GGACGGGAATTTTCGGCTCC 61.374 60.000 7.08 2.53 34.37 4.70
474 476 5.278315 GCACCTATAATGGACGGGAATTTTC 60.278 44.000 0.00 0.00 0.00 2.29
558 562 5.936187 TCTGTACGGGTTTATGGTTGATA 57.064 39.130 0.85 0.00 0.00 2.15
627 640 2.164219 CTGGCAGGCGATAACATGTTTT 59.836 45.455 17.78 9.08 0.00 2.43
650 663 3.109928 TGATGTGTGGTCCATCTCATCT 58.890 45.455 22.71 3.20 39.54 2.90
667 680 3.558829 CGATTTGGTGGATCTGACTGATG 59.441 47.826 0.00 0.00 35.14 3.07
688 701 0.531532 CCAGCTGAGGTATGGCTTCG 60.532 60.000 17.39 0.00 33.74 3.79
955 974 8.073768 TGAAGTTGTTAATTAACTAGTGCAAGC 58.926 33.333 24.81 8.57 37.39 4.01
1018 1038 2.447887 CGCAGACTTGGTAGCGCAG 61.448 63.158 11.47 0.00 43.80 5.18
1431 1590 7.481798 GGCTTAACATAATCAAGAGAACAAACG 59.518 37.037 0.00 0.00 0.00 3.60
1463 1637 0.622665 AGAAAGGCACCAGCAGCTAT 59.377 50.000 0.00 0.00 44.61 2.97
1490 1664 7.119407 CAGCACCTCAGATCATATAATCCAAAG 59.881 40.741 0.00 0.00 0.00 2.77
1640 1822 0.684535 TCCCAACTTCATGAGCGTGA 59.315 50.000 0.00 0.00 0.00 4.35
1659 1841 4.159135 CCAAATCAAGGCTTGCTAAGTCAT 59.841 41.667 22.31 5.96 34.95 3.06
1695 1877 7.730364 AGCCACGTTATTCTCATTATAAAGG 57.270 36.000 0.00 0.00 0.00 3.11
1782 1964 3.810941 GACGAACAAACCCAAGTGATGTA 59.189 43.478 0.00 0.00 0.00 2.29
1991 2173 2.067013 GAGGTGGAAGACGCTACAAAC 58.933 52.381 0.00 0.00 0.00 2.93
2028 2210 7.982919 AGTAACATTTAAACCAAACTGAAACCC 59.017 33.333 0.00 0.00 0.00 4.11
2029 2211 8.936070 AGTAACATTTAAACCAAACTGAAACC 57.064 30.769 0.00 0.00 0.00 3.27
2081 2266 8.692710 TCGTATGAGGAATTGAACATAGTAGTT 58.307 33.333 0.00 0.00 0.00 2.24
2108 2428 1.745115 GTAGGCAACGCATGAGGCA 60.745 57.895 0.00 0.00 45.17 4.75
2109 2429 1.026718 AAGTAGGCAACGCATGAGGC 61.027 55.000 0.00 0.00 46.39 4.70
2110 2430 1.453155 AAAGTAGGCAACGCATGAGG 58.547 50.000 0.00 0.00 46.39 3.86
2111 2431 3.559238 AAAAAGTAGGCAACGCATGAG 57.441 42.857 0.00 0.00 46.39 2.90
2380 2700 3.997021 GACTCATTGATGTTCCGTGAGTT 59.003 43.478 7.63 0.00 46.73 3.01
2461 2781 0.396060 GGCCATTTTGTTCAGCCCAA 59.604 50.000 0.00 0.00 37.66 4.12
2539 2871 8.354426 GGTTCTGGTATTATTGTAGAGACTCTC 58.646 40.741 8.64 0.00 0.00 3.20
2666 3006 4.651994 CATTAAGTCATCCGCTGAACAAC 58.348 43.478 0.00 0.00 35.07 3.32
2770 3110 5.007528 CGGAAACAAATTTGGCATTGTTCTT 59.992 36.000 21.74 4.18 46.09 2.52
2772 3112 4.771360 CGGAAACAAATTTGGCATTGTTC 58.229 39.130 21.74 13.33 46.09 3.18
2904 3244 2.935238 GCCTCGTCCATAGCAAAGTTCA 60.935 50.000 0.00 0.00 0.00 3.18
3058 3398 4.382362 GCAGCCTTCAGAAATTGCCTATTT 60.382 41.667 3.03 0.00 39.15 1.40
3081 3421 4.210120 CCGAAGCCGAATTAAAGAGATCTG 59.790 45.833 0.00 0.00 38.22 2.90
3160 3500 6.365839 CGTACTCGTAGAAACACTAACTTCA 58.634 40.000 0.00 0.00 34.09 3.02
3566 3907 5.183713 TGCAGCAGCTATTAAGTGAAATTGT 59.816 36.000 1.76 0.00 42.74 2.71
3586 3927 6.401047 AATTGGTCCTTATTGATGATGCAG 57.599 37.500 0.00 0.00 0.00 4.41
3587 3928 5.302568 GGAATTGGTCCTTATTGATGATGCA 59.697 40.000 0.00 0.00 43.98 3.96
3588 3929 5.776744 GGAATTGGTCCTTATTGATGATGC 58.223 41.667 0.00 0.00 43.98 3.91
3602 3943 1.066929 GTGGCATTGGTGGAATTGGTC 60.067 52.381 0.00 0.00 0.00 4.02
3603 3944 0.975887 GTGGCATTGGTGGAATTGGT 59.024 50.000 0.00 0.00 0.00 3.67
3604 3945 0.249955 GGTGGCATTGGTGGAATTGG 59.750 55.000 0.00 0.00 0.00 3.16
3605 3946 0.975135 TGGTGGCATTGGTGGAATTG 59.025 50.000 0.00 0.00 0.00 2.32
3606 3947 1.832998 GATGGTGGCATTGGTGGAATT 59.167 47.619 0.00 0.00 0.00 2.17
3607 3948 1.273154 TGATGGTGGCATTGGTGGAAT 60.273 47.619 0.00 0.00 0.00 3.01
3608 3949 0.113972 TGATGGTGGCATTGGTGGAA 59.886 50.000 0.00 0.00 0.00 3.53
3609 3950 0.113972 TTGATGGTGGCATTGGTGGA 59.886 50.000 0.00 0.00 0.00 4.02
3610 3951 1.196911 ATTGATGGTGGCATTGGTGG 58.803 50.000 0.00 0.00 0.00 4.61
3801 6284 3.041211 TGATCCCATCACCTCTACCAAG 58.959 50.000 0.00 0.00 33.59 3.61
3825 6310 3.183574 TGCAGTTCACAAATAACGACTCG 59.816 43.478 0.00 0.00 32.00 4.18
3960 6524 2.368439 TCGCAGGCTGCAAAAGATTAT 58.632 42.857 35.94 0.00 45.36 1.28
4059 7104 7.880713 TGCACTTTAACTGGACAGACATAATAA 59.119 33.333 6.29 0.00 0.00 1.40
4098 7146 4.604976 GAGCATGCCATGTTTTGATAGAC 58.395 43.478 15.66 0.00 0.00 2.59
4107 7155 1.819928 TAACACGAGCATGCCATGTT 58.180 45.000 25.86 25.86 37.30 2.71
4113 7172 2.355756 ACATTGGATAACACGAGCATGC 59.644 45.455 10.51 10.51 0.00 4.06
4121 7180 8.349983 ACAGTAACTCAAAACATTGGATAACAC 58.650 33.333 0.00 0.00 0.00 3.32
4228 7291 3.243002 GCTGCCTTGAGCTATTGATCAAC 60.243 47.826 11.07 0.00 42.72 3.18
4390 7772 1.064003 TAACTCCTGCCCAGCAAGAA 58.936 50.000 0.00 0.00 38.41 2.52
4397 7779 1.570857 CCCCACATAACTCCTGCCCA 61.571 60.000 0.00 0.00 0.00 5.36
4605 8170 4.025401 GTGTTTGTCAGCCCCGCG 62.025 66.667 0.00 0.00 0.00 6.46
4845 8422 3.056179 GGGTGGAGCTGATTAGAGATAGC 60.056 52.174 0.00 0.00 36.45 2.97
5067 8665 5.066968 AGCCTTTGTGTTTTCTCGAAAAA 57.933 34.783 6.41 0.00 41.37 1.94
5068 8666 4.712122 AGCCTTTGTGTTTTCTCGAAAA 57.288 36.364 0.93 0.93 37.90 2.29
5069 8667 4.712122 AAGCCTTTGTGTTTTCTCGAAA 57.288 36.364 0.00 0.00 0.00 3.46
5070 8668 4.420168 CAAAGCCTTTGTGTTTTCTCGAA 58.580 39.130 9.06 0.00 35.94 3.71
5071 8669 3.733684 GCAAAGCCTTTGTGTTTTCTCGA 60.734 43.478 17.88 0.00 42.56 4.04
5072 8670 2.535574 GCAAAGCCTTTGTGTTTTCTCG 59.464 45.455 17.88 0.00 42.56 4.04
5073 8671 2.535574 CGCAAAGCCTTTGTGTTTTCTC 59.464 45.455 19.98 0.67 44.04 2.87
5074 8672 2.539476 CGCAAAGCCTTTGTGTTTTCT 58.461 42.857 19.98 0.00 44.04 2.52
5075 8673 2.996691 CGCAAAGCCTTTGTGTTTTC 57.003 45.000 19.98 1.99 44.04 2.29
5081 8679 2.959507 AAGAAACGCAAAGCCTTTGT 57.040 40.000 17.88 0.00 42.56 2.83
5082 8680 3.616379 TGAAAAGAAACGCAAAGCCTTTG 59.384 39.130 12.87 12.87 43.44 2.77
5083 8681 3.855858 TGAAAAGAAACGCAAAGCCTTT 58.144 36.364 0.00 0.00 0.00 3.11
5084 8682 3.518634 TGAAAAGAAACGCAAAGCCTT 57.481 38.095 0.00 0.00 0.00 4.35
5085 8683 3.733443 ATGAAAAGAAACGCAAAGCCT 57.267 38.095 0.00 0.00 0.00 4.58
5086 8684 3.801594 TCAATGAAAAGAAACGCAAAGCC 59.198 39.130 0.00 0.00 0.00 4.35
5087 8685 4.739716 TCTCAATGAAAAGAAACGCAAAGC 59.260 37.500 0.00 0.00 0.00 3.51
5088 8686 6.473455 ACTTCTCAATGAAAAGAAACGCAAAG 59.527 34.615 2.99 0.00 33.79 2.77
5089 8687 6.253298 CACTTCTCAATGAAAAGAAACGCAAA 59.747 34.615 2.99 0.00 33.79 3.68
5090 8688 5.743398 CACTTCTCAATGAAAAGAAACGCAA 59.257 36.000 2.99 0.00 33.79 4.85
5091 8689 5.273170 CACTTCTCAATGAAAAGAAACGCA 58.727 37.500 2.99 0.00 33.79 5.24
5092 8690 4.676924 CCACTTCTCAATGAAAAGAAACGC 59.323 41.667 2.99 0.00 33.79 4.84
5093 8691 5.215160 CCCACTTCTCAATGAAAAGAAACG 58.785 41.667 2.99 0.00 33.79 3.60
5094 8692 5.509670 CCCCCACTTCTCAATGAAAAGAAAC 60.510 44.000 2.99 0.00 33.79 2.78
5095 8693 4.588528 CCCCCACTTCTCAATGAAAAGAAA 59.411 41.667 2.99 0.00 33.79 2.52
5096 8694 4.141041 TCCCCCACTTCTCAATGAAAAGAA 60.141 41.667 2.99 0.00 33.79 2.52
5097 8695 3.397618 TCCCCCACTTCTCAATGAAAAGA 59.602 43.478 2.99 0.00 33.79 2.52
5098 8696 3.766545 TCCCCCACTTCTCAATGAAAAG 58.233 45.455 0.00 0.00 33.79 2.27
5099 8697 3.893753 TCCCCCACTTCTCAATGAAAA 57.106 42.857 0.00 0.00 33.79 2.29
5100 8698 3.117322 TGTTCCCCCACTTCTCAATGAAA 60.117 43.478 0.00 0.00 33.79 2.69
5101 8699 2.445145 TGTTCCCCCACTTCTCAATGAA 59.555 45.455 0.00 0.00 0.00 2.57
5102 8700 2.061848 TGTTCCCCCACTTCTCAATGA 58.938 47.619 0.00 0.00 0.00 2.57
5103 8701 2.584835 TGTTCCCCCACTTCTCAATG 57.415 50.000 0.00 0.00 0.00 2.82
5104 8702 2.447047 ACTTGTTCCCCCACTTCTCAAT 59.553 45.455 0.00 0.00 0.00 2.57
5105 8703 1.850345 ACTTGTTCCCCCACTTCTCAA 59.150 47.619 0.00 0.00 0.00 3.02
5106 8704 1.518367 ACTTGTTCCCCCACTTCTCA 58.482 50.000 0.00 0.00 0.00 3.27
5107 8705 2.658807 AACTTGTTCCCCCACTTCTC 57.341 50.000 0.00 0.00 0.00 2.87
5108 8706 2.781174 TGTAACTTGTTCCCCCACTTCT 59.219 45.455 0.00 0.00 0.00 2.85
5109 8707 3.217681 TGTAACTTGTTCCCCCACTTC 57.782 47.619 0.00 0.00 0.00 3.01
5110 8708 3.496331 CATGTAACTTGTTCCCCCACTT 58.504 45.455 0.00 0.00 0.00 3.16
5111 8709 2.817839 GCATGTAACTTGTTCCCCCACT 60.818 50.000 0.00 0.00 0.00 4.00
5112 8710 1.544246 GCATGTAACTTGTTCCCCCAC 59.456 52.381 0.00 0.00 0.00 4.61
5113 8711 1.549037 GGCATGTAACTTGTTCCCCCA 60.549 52.381 0.00 0.00 0.00 4.96
5114 8712 1.182667 GGCATGTAACTTGTTCCCCC 58.817 55.000 0.00 0.00 0.00 5.40
5115 8713 2.092323 GAGGCATGTAACTTGTTCCCC 58.908 52.381 0.00 0.00 0.00 4.81
5116 8714 2.092323 GGAGGCATGTAACTTGTTCCC 58.908 52.381 0.00 0.00 0.00 3.97
5117 8715 3.073274 AGGAGGCATGTAACTTGTTCC 57.927 47.619 0.00 0.00 0.00 3.62
5118 8716 4.081087 TCCTAGGAGGCATGTAACTTGTTC 60.081 45.833 7.62 0.00 34.61 3.18
5119 8717 3.844211 TCCTAGGAGGCATGTAACTTGTT 59.156 43.478 7.62 0.00 34.61 2.83
5120 8718 3.450904 TCCTAGGAGGCATGTAACTTGT 58.549 45.455 7.62 0.00 34.61 3.16
5121 8719 4.065321 CTCCTAGGAGGCATGTAACTTG 57.935 50.000 28.68 1.14 38.51 3.16
5133 8731 0.984230 TGCAAACCACCTCCTAGGAG 59.016 55.000 29.27 29.27 37.67 3.69
5134 8732 0.984230 CTGCAAACCACCTCCTAGGA 59.016 55.000 11.98 11.98 37.67 2.94
5135 8733 0.693049 ACTGCAAACCACCTCCTAGG 59.307 55.000 0.82 0.82 42.49 3.02
5136 8734 2.568623 AACTGCAAACCACCTCCTAG 57.431 50.000 0.00 0.00 0.00 3.02
5137 8735 4.202524 ACATAAACTGCAAACCACCTCCTA 60.203 41.667 0.00 0.00 0.00 2.94
5138 8736 3.157087 CATAAACTGCAAACCACCTCCT 58.843 45.455 0.00 0.00 0.00 3.69
5139 8737 2.890945 ACATAAACTGCAAACCACCTCC 59.109 45.455 0.00 0.00 0.00 4.30
5140 8738 4.584327 AACATAAACTGCAAACCACCTC 57.416 40.909 0.00 0.00 0.00 3.85
5141 8739 4.890581 TGTAACATAAACTGCAAACCACCT 59.109 37.500 0.00 0.00 0.00 4.00
5142 8740 5.189659 TGTAACATAAACTGCAAACCACC 57.810 39.130 0.00 0.00 0.00 4.61
5143 8741 6.920758 TCATTGTAACATAAACTGCAAACCAC 59.079 34.615 0.00 0.00 0.00 4.16
5144 8742 7.043961 TCATTGTAACATAAACTGCAAACCA 57.956 32.000 0.00 0.00 0.00 3.67
5145 8743 8.028938 AGATCATTGTAACATAAACTGCAAACC 58.971 33.333 0.00 0.00 0.00 3.27
5146 8744 8.970691 AGATCATTGTAACATAAACTGCAAAC 57.029 30.769 0.00 0.00 0.00 2.93
5149 8747 9.448438 ACTAAGATCATTGTAACATAAACTGCA 57.552 29.630 0.00 0.00 0.00 4.41
5150 8748 9.708222 CACTAAGATCATTGTAACATAAACTGC 57.292 33.333 0.00 0.00 0.00 4.40
5154 8752 9.952030 TGTCCACTAAGATCATTGTAACATAAA 57.048 29.630 0.00 0.00 0.00 1.40
5156 8754 9.764363 GATGTCCACTAAGATCATTGTAACATA 57.236 33.333 10.42 0.00 0.00 2.29
5157 8755 7.716998 GGATGTCCACTAAGATCATTGTAACAT 59.283 37.037 10.31 10.31 35.64 2.71
5158 8756 7.047891 GGATGTCCACTAAGATCATTGTAACA 58.952 38.462 0.00 0.00 35.64 2.41
5159 8757 6.483640 GGGATGTCCACTAAGATCATTGTAAC 59.516 42.308 0.86 0.00 37.91 2.50
5160 8758 6.157820 TGGGATGTCCACTAAGATCATTGTAA 59.842 38.462 0.86 0.00 41.46 2.41
5161 8759 5.665360 TGGGATGTCCACTAAGATCATTGTA 59.335 40.000 0.86 0.00 41.46 2.41
5162 8760 4.474651 TGGGATGTCCACTAAGATCATTGT 59.525 41.667 0.86 0.00 41.46 2.71
5163 8761 5.039920 TGGGATGTCCACTAAGATCATTG 57.960 43.478 0.86 0.00 41.46 2.82
5164 8762 4.103785 CCTGGGATGTCCACTAAGATCATT 59.896 45.833 0.86 0.00 41.46 2.57
5165 8763 3.649981 CCTGGGATGTCCACTAAGATCAT 59.350 47.826 0.86 0.00 41.46 2.45
5166 8764 3.041211 CCTGGGATGTCCACTAAGATCA 58.959 50.000 0.86 0.00 41.46 2.92
5167 8765 3.041946 ACCTGGGATGTCCACTAAGATC 58.958 50.000 0.00 0.00 41.46 2.75
5168 8766 2.774234 CACCTGGGATGTCCACTAAGAT 59.226 50.000 0.00 0.00 41.46 2.40
5169 8767 2.187958 CACCTGGGATGTCCACTAAGA 58.812 52.381 0.00 0.00 41.46 2.10
5170 8768 1.407437 GCACCTGGGATGTCCACTAAG 60.407 57.143 0.00 0.00 41.46 2.18
5171 8769 0.618458 GCACCTGGGATGTCCACTAA 59.382 55.000 0.00 0.00 41.46 2.24
5172 8770 0.252696 AGCACCTGGGATGTCCACTA 60.253 55.000 0.00 0.00 41.46 2.74
5173 8771 0.252696 TAGCACCTGGGATGTCCACT 60.253 55.000 0.00 0.00 41.46 4.00
5174 8772 0.179000 CTAGCACCTGGGATGTCCAC 59.821 60.000 0.00 0.00 41.46 4.02
5175 8773 0.982852 CCTAGCACCTGGGATGTCCA 60.983 60.000 0.00 0.00 44.79 4.02
5176 8774 1.700042 CCCTAGCACCTGGGATGTCC 61.700 65.000 0.00 0.00 46.15 4.02
5177 8775 0.691078 TCCCTAGCACCTGGGATGTC 60.691 60.000 0.00 0.00 46.69 3.06
5178 8776 1.396185 TCCCTAGCACCTGGGATGT 59.604 57.895 0.00 0.00 46.69 3.06
5179 8777 4.399764 TCCCTAGCACCTGGGATG 57.600 61.111 0.00 0.00 46.69 3.51
5182 8780 1.832912 GTGATCCCTAGCACCTGGG 59.167 63.158 0.00 0.00 44.66 4.45
5187 8785 1.541233 CCGATTGGTGATCCCTAGCAC 60.541 57.143 0.00 0.00 41.38 4.40
5188 8786 0.758734 CCGATTGGTGATCCCTAGCA 59.241 55.000 0.00 0.00 0.00 3.49
5189 8787 1.001406 CTCCGATTGGTGATCCCTAGC 59.999 57.143 0.00 0.00 36.30 3.42
5190 8788 1.620819 CCTCCGATTGGTGATCCCTAG 59.379 57.143 2.37 0.00 36.30 3.02
5191 8789 1.717032 CCTCCGATTGGTGATCCCTA 58.283 55.000 2.37 0.00 36.30 3.53
5192 8790 1.700042 GCCTCCGATTGGTGATCCCT 61.700 60.000 2.37 0.00 36.30 4.20
5193 8791 1.227973 GCCTCCGATTGGTGATCCC 60.228 63.158 2.37 0.00 36.30 3.85
5194 8792 0.181350 AAGCCTCCGATTGGTGATCC 59.819 55.000 2.37 0.00 36.30 3.36
5195 8793 1.134401 TCAAGCCTCCGATTGGTGATC 60.134 52.381 2.37 0.00 36.30 2.92
5196 8794 0.911769 TCAAGCCTCCGATTGGTGAT 59.088 50.000 2.37 0.00 36.30 3.06
5197 8795 0.690192 TTCAAGCCTCCGATTGGTGA 59.310 50.000 2.37 0.00 36.30 4.02
5198 8796 1.089920 CTTCAAGCCTCCGATTGGTG 58.910 55.000 0.00 0.00 36.30 4.17
5199 8797 0.678048 GCTTCAAGCCTCCGATTGGT 60.678 55.000 0.00 0.00 34.48 3.67
5200 8798 2.101700 GCTTCAAGCCTCCGATTGG 58.898 57.895 0.00 0.00 34.48 3.16
5230 8828 2.111878 CAGAGGCCGCCTTATGGG 59.888 66.667 14.70 0.00 31.76 4.00
5231 8829 2.592861 GCAGAGGCCGCCTTATGG 60.593 66.667 14.70 4.85 31.76 2.74
5232 8830 0.749454 AAAGCAGAGGCCGCCTTATG 60.749 55.000 14.70 16.33 42.56 1.90
5233 8831 0.837272 TAAAGCAGAGGCCGCCTTAT 59.163 50.000 14.70 2.45 42.56 1.73
5234 8832 0.616371 TTAAAGCAGAGGCCGCCTTA 59.384 50.000 14.70 0.00 42.56 2.69
5235 8833 0.034089 ATTAAAGCAGAGGCCGCCTT 60.034 50.000 14.70 0.00 42.56 4.35
5236 8834 0.034089 AATTAAAGCAGAGGCCGCCT 60.034 50.000 13.16 13.16 42.56 5.52
5237 8835 0.382158 GAATTAAAGCAGAGGCCGCC 59.618 55.000 1.49 0.00 42.56 6.13
5238 8836 1.332065 GAGAATTAAAGCAGAGGCCGC 59.668 52.381 0.00 0.00 42.56 6.53
5239 8837 2.869192 GAGAGAATTAAAGCAGAGGCCG 59.131 50.000 0.00 0.00 42.56 6.13
5240 8838 3.876320 CAGAGAGAATTAAAGCAGAGGCC 59.124 47.826 0.00 0.00 42.56 5.19
5241 8839 4.512484 ACAGAGAGAATTAAAGCAGAGGC 58.488 43.478 0.00 0.00 41.61 4.70
5242 8840 6.257630 GCTAACAGAGAGAATTAAAGCAGAGG 59.742 42.308 0.00 0.00 0.00 3.69
5243 8841 7.010367 CAGCTAACAGAGAGAATTAAAGCAGAG 59.990 40.741 0.00 0.00 0.00 3.35
5244 8842 6.815641 CAGCTAACAGAGAGAATTAAAGCAGA 59.184 38.462 0.00 0.00 0.00 4.26
5245 8843 6.036953 CCAGCTAACAGAGAGAATTAAAGCAG 59.963 42.308 0.00 0.00 0.00 4.24
5246 8844 5.877012 CCAGCTAACAGAGAGAATTAAAGCA 59.123 40.000 0.00 0.00 0.00 3.91
5247 8845 5.877564 ACCAGCTAACAGAGAGAATTAAAGC 59.122 40.000 0.00 0.00 0.00 3.51
5248 8846 6.314896 CCACCAGCTAACAGAGAGAATTAAAG 59.685 42.308 0.00 0.00 0.00 1.85
5249 8847 6.013725 TCCACCAGCTAACAGAGAGAATTAAA 60.014 38.462 0.00 0.00 0.00 1.52
5250 8848 5.483937 TCCACCAGCTAACAGAGAGAATTAA 59.516 40.000 0.00 0.00 0.00 1.40
5251 8849 5.023452 TCCACCAGCTAACAGAGAGAATTA 58.977 41.667 0.00 0.00 0.00 1.40
5252 8850 3.840666 TCCACCAGCTAACAGAGAGAATT 59.159 43.478 0.00 0.00 0.00 2.17
5253 8851 3.196685 GTCCACCAGCTAACAGAGAGAAT 59.803 47.826 0.00 0.00 0.00 2.40
5254 8852 2.563179 GTCCACCAGCTAACAGAGAGAA 59.437 50.000 0.00 0.00 0.00 2.87
5255 8853 2.171840 GTCCACCAGCTAACAGAGAGA 58.828 52.381 0.00 0.00 0.00 3.10
5256 8854 2.094286 CAGTCCACCAGCTAACAGAGAG 60.094 54.545 0.00 0.00 0.00 3.20
5257 8855 1.895798 CAGTCCACCAGCTAACAGAGA 59.104 52.381 0.00 0.00 0.00 3.10
5258 8856 1.895798 TCAGTCCACCAGCTAACAGAG 59.104 52.381 0.00 0.00 0.00 3.35
5259 8857 2.009681 TCAGTCCACCAGCTAACAGA 57.990 50.000 0.00 0.00 0.00 3.41
5260 8858 2.625737 CATCAGTCCACCAGCTAACAG 58.374 52.381 0.00 0.00 0.00 3.16
5261 8859 1.278985 CCATCAGTCCACCAGCTAACA 59.721 52.381 0.00 0.00 0.00 2.41
5262 8860 1.279271 ACCATCAGTCCACCAGCTAAC 59.721 52.381 0.00 0.00 0.00 2.34
5263 8861 1.656587 ACCATCAGTCCACCAGCTAA 58.343 50.000 0.00 0.00 0.00 3.09
5264 8862 1.278985 CAACCATCAGTCCACCAGCTA 59.721 52.381 0.00 0.00 0.00 3.32
5265 8863 0.037303 CAACCATCAGTCCACCAGCT 59.963 55.000 0.00 0.00 0.00 4.24
5266 8864 0.036732 TCAACCATCAGTCCACCAGC 59.963 55.000 0.00 0.00 0.00 4.85
5267 8865 1.611673 GGTCAACCATCAGTCCACCAG 60.612 57.143 0.00 0.00 32.49 4.00
5268 8866 0.400213 GGTCAACCATCAGTCCACCA 59.600 55.000 0.00 0.00 32.49 4.17
5269 8867 0.322546 GGGTCAACCATCAGTCCACC 60.323 60.000 0.89 0.00 39.85 4.61
5270 8868 0.322546 GGGGTCAACCATCAGTCCAC 60.323 60.000 0.89 0.00 42.91 4.02
5271 8869 0.770166 TGGGGTCAACCATCAGTCCA 60.770 55.000 0.89 0.00 42.91 4.02
5272 8870 2.074967 TGGGGTCAACCATCAGTCC 58.925 57.895 0.89 0.00 42.91 3.85
5279 8877 4.566837 ACATATCTAGATGGGGTCAACCA 58.433 43.478 15.79 0.00 46.24 3.67
5280 8878 4.593206 TGACATATCTAGATGGGGTCAACC 59.407 45.833 22.82 7.56 39.11 3.77
5281 8879 5.540337 TCTGACATATCTAGATGGGGTCAAC 59.460 44.000 24.03 8.98 0.00 3.18
5282 8880 5.715921 TCTGACATATCTAGATGGGGTCAA 58.284 41.667 24.03 16.88 0.00 3.18
5283 8881 5.339423 TCTGACATATCTAGATGGGGTCA 57.661 43.478 23.19 23.19 0.00 4.02
5284 8882 6.865834 ATTCTGACATATCTAGATGGGGTC 57.134 41.667 15.79 17.63 0.00 4.46
5285 8883 8.923838 AATATTCTGACATATCTAGATGGGGT 57.076 34.615 15.79 10.06 0.00 4.95
5316 9181 2.079158 TGCAAGCAAATCGAAGAGGAG 58.921 47.619 0.00 0.00 43.63 3.69
5437 9327 7.148239 CCAAACTGGTATAATTGTGGAGAGTTC 60.148 40.741 0.00 0.00 31.35 3.01
5597 9490 2.051345 GACGCACCCTGCAAAACG 60.051 61.111 0.00 0.00 45.36 3.60
5657 9551 2.961062 AGCAGTGGCAAGTTTCTGAAAT 59.039 40.909 6.06 0.00 44.61 2.17
5675 9569 2.557924 CTCCTTGTTTGCAACCATAGCA 59.442 45.455 0.00 0.00 40.85 3.49
6122 16092 2.202623 GCGCGAGAGGTACCTGTG 60.203 66.667 22.10 13.06 0.00 3.66
6249 16227 2.050836 AACATGCACCCGACAGTGGA 62.051 55.000 0.00 0.47 42.62 4.02
6255 16233 5.932303 AGTATAATATGAACATGCACCCGAC 59.068 40.000 0.00 0.00 0.00 4.79
6299 16287 1.405469 GCCTGCGCTATTGCAAAACG 61.405 55.000 9.73 9.03 45.74 3.60
6448 16437 4.104738 AGTCTCTCAAAGGGGAACAAATCA 59.895 41.667 0.00 0.00 0.00 2.57
6601 16754 1.602605 AGCACCCAAAGGCGGTAAC 60.603 57.895 0.00 0.00 36.11 2.50
6614 16767 2.434359 GGTCACGTAGCCAGCACC 60.434 66.667 0.00 0.00 0.00 5.01
6682 16836 2.421424 CCAGGCTGTGAACTGCTATTTC 59.579 50.000 14.43 0.00 40.16 2.17
6687 16841 2.282040 GCCAGGCTGTGAACTGCT 60.282 61.111 14.43 0.00 40.16 4.24
6851 17612 6.875948 TGTAAGTATGCATGACAAAAGTGT 57.124 33.333 10.16 0.00 42.10 3.55
6862 17623 7.440556 GTCTCAGTTCATCATGTAAGTATGCAT 59.559 37.037 3.79 3.79 31.41 3.96
6863 17624 6.758416 GTCTCAGTTCATCATGTAAGTATGCA 59.242 38.462 0.00 0.00 0.00 3.96
6864 17625 6.758416 TGTCTCAGTTCATCATGTAAGTATGC 59.242 38.462 0.00 0.00 0.00 3.14
6865 17626 7.978414 AGTGTCTCAGTTCATCATGTAAGTATG 59.022 37.037 0.00 0.00 0.00 2.39
6866 17627 8.072321 AGTGTCTCAGTTCATCATGTAAGTAT 57.928 34.615 0.00 0.00 0.00 2.12
6867 17628 7.468141 AGTGTCTCAGTTCATCATGTAAGTA 57.532 36.000 0.00 0.00 0.00 2.24
6868 17629 6.352016 AGTGTCTCAGTTCATCATGTAAGT 57.648 37.500 0.00 0.00 0.00 2.24
6869 17630 8.939201 AATAGTGTCTCAGTTCATCATGTAAG 57.061 34.615 0.00 0.00 0.00 2.34
6870 17631 9.725019 AAAATAGTGTCTCAGTTCATCATGTAA 57.275 29.630 0.00 0.00 0.00 2.41
6871 17632 9.371136 GAAAATAGTGTCTCAGTTCATCATGTA 57.629 33.333 0.00 0.00 0.00 2.29
6872 17633 7.335422 GGAAAATAGTGTCTCAGTTCATCATGT 59.665 37.037 0.00 0.00 0.00 3.21
6873 17634 7.551974 AGGAAAATAGTGTCTCAGTTCATCATG 59.448 37.037 0.00 0.00 0.00 3.07
6874 17635 7.628234 AGGAAAATAGTGTCTCAGTTCATCAT 58.372 34.615 0.00 0.00 0.00 2.45
6875 17636 7.009179 AGGAAAATAGTGTCTCAGTTCATCA 57.991 36.000 0.00 0.00 0.00 3.07
6876 17637 6.536941 GGAGGAAAATAGTGTCTCAGTTCATC 59.463 42.308 0.00 0.00 0.00 2.92
6877 17638 6.214412 AGGAGGAAAATAGTGTCTCAGTTCAT 59.786 38.462 0.00 0.00 0.00 2.57
6878 17639 5.544176 AGGAGGAAAATAGTGTCTCAGTTCA 59.456 40.000 0.00 0.00 0.00 3.18
6879 17640 6.043854 AGGAGGAAAATAGTGTCTCAGTTC 57.956 41.667 0.00 0.00 0.00 3.01
6880 17641 6.441088 AAGGAGGAAAATAGTGTCTCAGTT 57.559 37.500 0.00 0.00 0.00 3.16
6881 17642 6.441088 AAAGGAGGAAAATAGTGTCTCAGT 57.559 37.500 0.00 0.00 0.00 3.41
6882 17643 8.260818 TCATAAAGGAGGAAAATAGTGTCTCAG 58.739 37.037 0.00 0.00 0.00 3.35
6883 17644 8.146053 TCATAAAGGAGGAAAATAGTGTCTCA 57.854 34.615 0.00 0.00 0.00 3.27
6884 17645 9.267084 GATCATAAAGGAGGAAAATAGTGTCTC 57.733 37.037 0.00 0.00 0.00 3.36
6885 17646 8.997734 AGATCATAAAGGAGGAAAATAGTGTCT 58.002 33.333 0.00 0.00 0.00 3.41
6947 17858 3.924686 GCCAAAAGATGAGCAAACATGAG 59.075 43.478 0.00 0.00 0.00 2.90
6948 17859 3.575256 AGCCAAAAGATGAGCAAACATGA 59.425 39.130 0.00 0.00 0.00 3.07
6950 17861 4.562143 GGAAGCCAAAAGATGAGCAAACAT 60.562 41.667 0.00 0.00 0.00 2.71
6954 17865 2.821969 GAGGAAGCCAAAAGATGAGCAA 59.178 45.455 0.00 0.00 0.00 3.91
6969 17880 3.772025 ACAGTCTGGAATACTGGAGGAAG 59.228 47.826 4.53 0.00 46.97 3.46
7075 17986 1.168714 GCATGAGGAAGGGTGACAAC 58.831 55.000 0.00 0.00 0.00 3.32
7088 17999 3.770263 AACGGATGTCAAATGCATGAG 57.230 42.857 0.00 0.00 0.00 2.90
7132 18043 1.214367 TCGTTCCACTTGCGAAGAAC 58.786 50.000 3.37 2.88 36.19 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.