Multiple sequence alignment - TraesCS5D01G015900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G015900 chr5D 100.000 3991 0 0 1 3991 9118402 9122392 0.000000e+00 7371.0
1 TraesCS5D01G015900 chr5D 89.873 79 6 1 1916 1994 5804064 5804140 2.540000e-17 100.0
2 TraesCS5D01G015900 chr5D 88.095 84 7 2 1911 1994 5804150 5804070 3.280000e-16 97.1
3 TraesCS5D01G015900 chr5D 85.263 95 13 1 1912 2005 324374994 324375088 3.280000e-16 97.1
4 TraesCS5D01G015900 chr5A 93.539 2012 103 15 1995 3990 7361168 7363168 0.000000e+00 2970.0
5 TraesCS5D01G015900 chr5A 88.610 878 64 18 730 1576 7359975 7360847 0.000000e+00 1035.0
6 TraesCS5D01G015900 chr5A 83.051 236 28 5 487 722 7359705 7359928 1.880000e-48 204.0
7 TraesCS5D01G015900 chr5B 91.342 1155 65 16 1995 3134 9262229 9263363 0.000000e+00 1546.0
8 TraesCS5D01G015900 chr5B 89.074 842 43 21 3164 3991 9263359 9264165 0.000000e+00 1000.0
9 TraesCS5D01G015900 chr5B 86.239 872 71 21 730 1573 9261031 9261881 0.000000e+00 900.0
10 TraesCS5D01G015900 chr5B 84.615 91 13 1 1916 2005 375800268 375800358 5.490000e-14 89.8
11 TraesCS5D01G015900 chr5B 79.412 136 19 3 588 723 9260864 9260990 1.980000e-13 87.9
12 TraesCS5D01G015900 chr6B 79.915 234 28 8 1085 1303 22743779 22744008 1.920000e-33 154.0
13 TraesCS5D01G015900 chr2B 93.243 74 5 0 1916 1989 247368622 247368549 4.220000e-20 110.0
14 TraesCS5D01G015900 chr1B 86.458 96 9 4 1907 1998 380693292 380693387 7.060000e-18 102.0
15 TraesCS5D01G015900 chrUn 88.095 84 10 0 1906 1989 96589107 96589190 2.540000e-17 100.0
16 TraesCS5D01G015900 chr7B 89.024 82 8 1 1907 1987 454616844 454616763 2.540000e-17 100.0
17 TraesCS5D01G015900 chr3B 87.805 82 9 1 1907 1987 503721596 503721677 1.180000e-15 95.3
18 TraesCS5D01G015900 chr3B 84.416 77 10 2 1929 2003 487045553 487045477 1.540000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G015900 chr5D 9118402 9122392 3990 False 7371.000 7371 100.00000 1 3991 1 chr5D.!!$F2 3990
1 TraesCS5D01G015900 chr5A 7359705 7363168 3463 False 1403.000 2970 88.40000 487 3990 3 chr5A.!!$F1 3503
2 TraesCS5D01G015900 chr5B 9260864 9264165 3301 False 883.475 1546 86.51675 588 3991 4 chr5B.!!$F2 3403

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
418 419 0.030908 GCAGACGGGTCTATTCCTCG 59.969 60.0 0.21 0.0 37.98 4.63 F
422 423 0.033796 ACGGGTCTATTCCTCGTCCA 60.034 55.0 0.00 0.0 32.20 4.02 F
460 461 0.035820 GTGGCCAACGATTACCTCCA 60.036 55.0 7.24 0.0 0.00 3.86 F
727 728 0.178975 AGCTAGATGGAGGAGGGTCG 60.179 60.0 0.00 0.0 0.00 4.79 F
1765 1884 0.043637 CCAGAACCCCTAGTACCCCA 59.956 60.0 0.00 0.0 0.00 4.96 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1390 1476 0.026285 CTTCCTAATTTGCGCGACGG 59.974 55.0 12.10 0.00 0.00 4.79 R
1420 1506 0.038744 ATGGGAGGCTGACAAGTTGG 59.961 55.0 7.96 0.00 0.00 3.77 R
1649 1766 0.173481 CAGTTTCCATCGAGGCGAGA 59.827 55.0 0.00 0.00 39.91 4.04 R
2618 2761 0.106268 TCAGCTGAAAAGGGGTGCAA 60.106 50.0 15.67 0.00 0.00 4.08 R
3037 3192 0.661187 AGAATTGCAAACGCAGCGTG 60.661 50.0 23.78 11.47 39.99 5.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.842462 TCATATCCGGGCAGCCGT 60.842 61.111 5.00 0.00 0.00 5.68
18 19 2.357517 CATATCCGGGCAGCCGTC 60.358 66.667 5.00 0.00 0.00 4.79
19 20 2.524394 ATATCCGGGCAGCCGTCT 60.524 61.111 5.00 0.00 0.00 4.18
20 21 2.872388 ATATCCGGGCAGCCGTCTG 61.872 63.158 5.00 0.00 43.16 3.51
28 29 2.743928 CAGCCGTCTGCACTTCCC 60.744 66.667 0.00 0.00 44.83 3.97
29 30 4.021925 AGCCGTCTGCACTTCCCC 62.022 66.667 0.00 0.00 44.83 4.81
30 31 4.329545 GCCGTCTGCACTTCCCCA 62.330 66.667 0.00 0.00 40.77 4.96
31 32 2.671070 CCGTCTGCACTTCCCCAT 59.329 61.111 0.00 0.00 0.00 4.00
32 33 1.450312 CCGTCTGCACTTCCCCATC 60.450 63.158 0.00 0.00 0.00 3.51
33 34 1.296392 CGTCTGCACTTCCCCATCA 59.704 57.895 0.00 0.00 0.00 3.07
34 35 0.321564 CGTCTGCACTTCCCCATCAA 60.322 55.000 0.00 0.00 0.00 2.57
35 36 1.881925 CGTCTGCACTTCCCCATCAAA 60.882 52.381 0.00 0.00 0.00 2.69
36 37 1.541588 GTCTGCACTTCCCCATCAAAC 59.458 52.381 0.00 0.00 0.00 2.93
37 38 1.144708 TCTGCACTTCCCCATCAAACA 59.855 47.619 0.00 0.00 0.00 2.83
38 39 2.173519 CTGCACTTCCCCATCAAACAT 58.826 47.619 0.00 0.00 0.00 2.71
39 40 2.165030 CTGCACTTCCCCATCAAACATC 59.835 50.000 0.00 0.00 0.00 3.06
40 41 1.478105 GCACTTCCCCATCAAACATCC 59.522 52.381 0.00 0.00 0.00 3.51
41 42 2.806434 CACTTCCCCATCAAACATCCA 58.194 47.619 0.00 0.00 0.00 3.41
42 43 2.756760 CACTTCCCCATCAAACATCCAG 59.243 50.000 0.00 0.00 0.00 3.86
43 44 1.753073 CTTCCCCATCAAACATCCAGC 59.247 52.381 0.00 0.00 0.00 4.85
44 45 0.033208 TCCCCATCAAACATCCAGCC 60.033 55.000 0.00 0.00 0.00 4.85
45 46 0.032813 CCCCATCAAACATCCAGCCT 60.033 55.000 0.00 0.00 0.00 4.58
46 47 1.215173 CCCCATCAAACATCCAGCCTA 59.785 52.381 0.00 0.00 0.00 3.93
47 48 2.358090 CCCCATCAAACATCCAGCCTAA 60.358 50.000 0.00 0.00 0.00 2.69
48 49 2.954318 CCCATCAAACATCCAGCCTAAG 59.046 50.000 0.00 0.00 0.00 2.18
49 50 2.954318 CCATCAAACATCCAGCCTAAGG 59.046 50.000 0.00 0.00 0.00 2.69
64 65 5.966742 GCCTAAGGCCCATCTTAAATAAG 57.033 43.478 0.00 0.00 44.06 1.73
65 66 4.767409 GCCTAAGGCCCATCTTAAATAAGG 59.233 45.833 0.00 0.00 44.06 2.69
66 67 5.325239 CCTAAGGCCCATCTTAAATAAGGG 58.675 45.833 0.00 0.00 42.55 3.95
74 75 7.454260 CCCATCTTAAATAAGGGCTCAATAC 57.546 40.000 0.62 0.00 34.14 1.89
75 76 7.004086 CCCATCTTAAATAAGGGCTCAATACA 58.996 38.462 0.62 0.00 34.14 2.29
76 77 7.671398 CCCATCTTAAATAAGGGCTCAATACAT 59.329 37.037 0.62 0.00 34.14 2.29
77 78 8.734386 CCATCTTAAATAAGGGCTCAATACATC 58.266 37.037 0.62 0.00 34.14 3.06
78 79 9.512588 CATCTTAAATAAGGGCTCAATACATCT 57.487 33.333 0.62 0.00 34.14 2.90
80 81 9.998106 TCTTAAATAAGGGCTCAATACATCTAC 57.002 33.333 0.62 0.00 34.14 2.59
81 82 9.778741 CTTAAATAAGGGCTCAATACATCTACA 57.221 33.333 0.00 0.00 0.00 2.74
84 85 9.726438 AAATAAGGGCTCAATACATCTACATAC 57.274 33.333 0.00 0.00 0.00 2.39
85 86 5.746990 AGGGCTCAATACATCTACATACC 57.253 43.478 0.00 0.00 0.00 2.73
86 87 5.407049 AGGGCTCAATACATCTACATACCT 58.593 41.667 0.00 0.00 0.00 3.08
87 88 6.562228 AGGGCTCAATACATCTACATACCTA 58.438 40.000 0.00 0.00 0.00 3.08
88 89 7.016914 AGGGCTCAATACATCTACATACCTAA 58.983 38.462 0.00 0.00 0.00 2.69
89 90 7.512746 AGGGCTCAATACATCTACATACCTAAA 59.487 37.037 0.00 0.00 0.00 1.85
90 91 8.154856 GGGCTCAATACATCTACATACCTAAAA 58.845 37.037 0.00 0.00 0.00 1.52
91 92 9.555727 GGCTCAATACATCTACATACCTAAAAA 57.444 33.333 0.00 0.00 0.00 1.94
142 143 9.442047 GAAGATAATGTCAACTCTATTATGGGG 57.558 37.037 0.00 0.00 29.67 4.96
143 144 8.511748 AGATAATGTCAACTCTATTATGGGGT 57.488 34.615 0.00 0.00 29.67 4.95
144 145 8.949421 AGATAATGTCAACTCTATTATGGGGTT 58.051 33.333 0.00 0.00 29.67 4.11
145 146 8.924511 ATAATGTCAACTCTATTATGGGGTTG 57.075 34.615 14.06 14.06 38.69 3.77
146 147 5.110814 TGTCAACTCTATTATGGGGTTGG 57.889 43.478 18.80 3.62 38.13 3.77
147 148 4.785914 TGTCAACTCTATTATGGGGTTGGA 59.214 41.667 18.80 5.84 38.13 3.53
148 149 5.431731 TGTCAACTCTATTATGGGGTTGGAT 59.568 40.000 18.80 0.00 38.13 3.41
149 150 6.617784 TGTCAACTCTATTATGGGGTTGGATA 59.382 38.462 18.80 5.52 38.13 2.59
150 151 7.162082 GTCAACTCTATTATGGGGTTGGATAG 58.838 42.308 18.80 0.00 38.13 2.08
151 152 6.272324 TCAACTCTATTATGGGGTTGGATAGG 59.728 42.308 18.80 0.00 38.13 2.57
152 153 5.101529 ACTCTATTATGGGGTTGGATAGGG 58.898 45.833 0.00 0.00 0.00 3.53
153 154 4.444611 TCTATTATGGGGTTGGATAGGGG 58.555 47.826 0.00 0.00 0.00 4.79
154 155 1.841334 TTATGGGGTTGGATAGGGGG 58.159 55.000 0.00 0.00 0.00 5.40
155 156 0.774491 TATGGGGTTGGATAGGGGGC 60.774 60.000 0.00 0.00 0.00 5.80
156 157 3.508685 GGGGTTGGATAGGGGGCC 61.509 72.222 0.00 0.00 0.00 5.80
157 158 2.698406 GGGTTGGATAGGGGGCCA 60.698 66.667 4.39 0.00 0.00 5.36
158 159 2.091283 GGGTTGGATAGGGGGCCAT 61.091 63.158 4.39 0.00 33.46 4.40
159 160 1.664956 GGGTTGGATAGGGGGCCATT 61.665 60.000 4.39 0.00 33.46 3.16
160 161 0.469892 GGTTGGATAGGGGGCCATTG 60.470 60.000 4.39 0.00 33.46 2.82
161 162 1.115326 GTTGGATAGGGGGCCATTGC 61.115 60.000 4.39 0.00 33.46 3.56
171 172 4.529731 GCCATTGCCCCCTCCCTC 62.530 72.222 0.00 0.00 0.00 4.30
172 173 4.195334 CCATTGCCCCCTCCCTCG 62.195 72.222 0.00 0.00 0.00 4.63
173 174 4.883354 CATTGCCCCCTCCCTCGC 62.883 72.222 0.00 0.00 0.00 5.03
178 179 3.787001 CCCCCTCCCTCGCACTTC 61.787 72.222 0.00 0.00 0.00 3.01
179 180 3.003173 CCCCTCCCTCGCACTTCA 61.003 66.667 0.00 0.00 0.00 3.02
180 181 2.266055 CCCTCCCTCGCACTTCAC 59.734 66.667 0.00 0.00 0.00 3.18
181 182 2.266055 CCTCCCTCGCACTTCACC 59.734 66.667 0.00 0.00 0.00 4.02
182 183 2.125912 CTCCCTCGCACTTCACCG 60.126 66.667 0.00 0.00 0.00 4.94
183 184 2.915659 TCCCTCGCACTTCACCGT 60.916 61.111 0.00 0.00 0.00 4.83
184 185 2.738521 CCCTCGCACTTCACCGTG 60.739 66.667 0.00 0.00 37.94 4.94
185 186 2.029073 CCTCGCACTTCACCGTGT 59.971 61.111 0.00 0.00 37.24 4.49
186 187 1.287815 CCTCGCACTTCACCGTGTA 59.712 57.895 0.00 0.00 37.24 2.90
187 188 0.108804 CCTCGCACTTCACCGTGTAT 60.109 55.000 0.00 0.00 37.24 2.29
188 189 1.133598 CCTCGCACTTCACCGTGTATA 59.866 52.381 0.00 0.00 37.24 1.47
189 190 2.223735 CCTCGCACTTCACCGTGTATAT 60.224 50.000 0.00 0.00 37.24 0.86
190 191 3.444916 CTCGCACTTCACCGTGTATATT 58.555 45.455 0.00 0.00 37.24 1.28
191 192 3.852286 TCGCACTTCACCGTGTATATTT 58.148 40.909 0.00 0.00 37.24 1.40
192 193 4.996344 TCGCACTTCACCGTGTATATTTA 58.004 39.130 0.00 0.00 37.24 1.40
193 194 5.593968 TCGCACTTCACCGTGTATATTTAT 58.406 37.500 0.00 0.00 37.24 1.40
194 195 6.044046 TCGCACTTCACCGTGTATATTTATT 58.956 36.000 0.00 0.00 37.24 1.40
195 196 6.535865 TCGCACTTCACCGTGTATATTTATTT 59.464 34.615 0.00 0.00 37.24 1.40
196 197 7.705752 TCGCACTTCACCGTGTATATTTATTTA 59.294 33.333 0.00 0.00 37.24 1.40
197 198 8.329583 CGCACTTCACCGTGTATATTTATTTAA 58.670 33.333 0.00 0.00 37.24 1.52
227 228 8.967664 TGTTTATGGTTAAGTACATGTATCCC 57.032 34.615 9.18 5.70 0.00 3.85
228 229 7.711772 TGTTTATGGTTAAGTACATGTATCCCG 59.288 37.037 9.18 0.00 0.00 5.14
229 230 4.675976 TGGTTAAGTACATGTATCCCGG 57.324 45.455 9.18 0.00 0.00 5.73
230 231 3.388676 TGGTTAAGTACATGTATCCCGGG 59.611 47.826 16.85 16.85 0.00 5.73
231 232 3.642848 GGTTAAGTACATGTATCCCGGGA 59.357 47.826 29.18 29.18 0.00 5.14
232 233 4.502087 GGTTAAGTACATGTATCCCGGGAC 60.502 50.000 29.69 16.36 0.00 4.46
233 234 2.464796 AGTACATGTATCCCGGGACA 57.535 50.000 29.69 22.34 0.00 4.02
234 235 2.754465 AGTACATGTATCCCGGGACAA 58.246 47.619 29.69 15.27 0.00 3.18
235 236 3.109151 AGTACATGTATCCCGGGACAAA 58.891 45.455 29.69 10.95 0.00 2.83
236 237 2.710096 ACATGTATCCCGGGACAAAG 57.290 50.000 29.69 19.21 0.00 2.77
237 238 1.308998 CATGTATCCCGGGACAAAGC 58.691 55.000 29.69 14.63 0.00 3.51
238 239 0.916086 ATGTATCCCGGGACAAAGCA 59.084 50.000 29.69 19.86 0.00 3.91
239 240 0.035820 TGTATCCCGGGACAAAGCAC 60.036 55.000 29.69 16.69 0.00 4.40
240 241 0.746923 GTATCCCGGGACAAAGCACC 60.747 60.000 29.69 0.00 0.00 5.01
241 242 1.917336 TATCCCGGGACAAAGCACCC 61.917 60.000 29.69 0.00 42.43 4.61
242 243 4.278513 CCCGGGACAAAGCACCCA 62.279 66.667 18.48 0.00 45.83 4.51
243 244 2.983592 CCGGGACAAAGCACCCAC 60.984 66.667 0.00 0.00 45.83 4.61
244 245 2.113139 CGGGACAAAGCACCCACT 59.887 61.111 0.00 0.00 45.83 4.00
245 246 1.373435 CGGGACAAAGCACCCACTA 59.627 57.895 0.00 0.00 45.83 2.74
246 247 0.953960 CGGGACAAAGCACCCACTAC 60.954 60.000 0.00 0.00 45.83 2.73
247 248 0.953960 GGGACAAAGCACCCACTACG 60.954 60.000 0.00 0.00 44.96 3.51
248 249 1.574702 GGACAAAGCACCCACTACGC 61.575 60.000 0.00 0.00 0.00 4.42
249 250 0.602905 GACAAAGCACCCACTACGCT 60.603 55.000 0.00 0.00 37.68 5.07
250 251 0.682852 ACAAAGCACCCACTACGCTA 59.317 50.000 0.00 0.00 34.11 4.26
251 252 1.076332 CAAAGCACCCACTACGCTAC 58.924 55.000 0.00 0.00 34.11 3.58
252 253 0.974383 AAAGCACCCACTACGCTACT 59.026 50.000 0.00 0.00 34.11 2.57
253 254 0.974383 AAGCACCCACTACGCTACTT 59.026 50.000 0.00 0.00 34.11 2.24
254 255 0.246635 AGCACCCACTACGCTACTTG 59.753 55.000 0.00 0.00 33.25 3.16
255 256 1.359459 GCACCCACTACGCTACTTGC 61.359 60.000 0.00 0.00 38.57 4.01
256 257 0.037697 CACCCACTACGCTACTTGCA 60.038 55.000 0.00 0.00 43.06 4.08
257 258 0.682852 ACCCACTACGCTACTTGCAA 59.317 50.000 0.00 0.00 43.06 4.08
258 259 1.076332 CCCACTACGCTACTTGCAAC 58.924 55.000 0.00 0.00 43.06 4.17
259 260 1.337823 CCCACTACGCTACTTGCAACT 60.338 52.381 0.00 0.00 43.06 3.16
260 261 2.094390 CCCACTACGCTACTTGCAACTA 60.094 50.000 0.00 0.00 43.06 2.24
261 262 2.921754 CCACTACGCTACTTGCAACTAC 59.078 50.000 0.00 0.00 43.06 2.73
262 263 3.571571 CACTACGCTACTTGCAACTACA 58.428 45.455 0.00 0.00 43.06 2.74
263 264 3.985279 CACTACGCTACTTGCAACTACAA 59.015 43.478 0.00 0.00 43.06 2.41
264 265 4.446385 CACTACGCTACTTGCAACTACAAA 59.554 41.667 0.00 0.00 43.06 2.83
265 266 5.120208 CACTACGCTACTTGCAACTACAAAT 59.880 40.000 0.00 0.00 43.06 2.32
266 267 6.309494 CACTACGCTACTTGCAACTACAAATA 59.691 38.462 0.00 0.00 43.06 1.40
267 268 6.869913 ACTACGCTACTTGCAACTACAAATAA 59.130 34.615 0.00 0.00 43.06 1.40
268 269 6.548441 ACGCTACTTGCAACTACAAATAAA 57.452 33.333 0.00 0.00 43.06 1.40
269 270 6.961576 ACGCTACTTGCAACTACAAATAAAA 58.038 32.000 0.00 0.00 43.06 1.52
270 271 7.590279 ACGCTACTTGCAACTACAAATAAAAT 58.410 30.769 0.00 0.00 43.06 1.82
271 272 7.749126 ACGCTACTTGCAACTACAAATAAAATC 59.251 33.333 0.00 0.00 43.06 2.17
272 273 7.748683 CGCTACTTGCAACTACAAATAAAATCA 59.251 33.333 0.00 0.00 43.06 2.57
273 274 9.573133 GCTACTTGCAACTACAAATAAAATCAT 57.427 29.630 0.00 0.00 42.31 2.45
275 276 8.986477 ACTTGCAACTACAAATAAAATCATCC 57.014 30.769 0.00 0.00 0.00 3.51
276 277 8.584157 ACTTGCAACTACAAATAAAATCATCCA 58.416 29.630 0.00 0.00 0.00 3.41
277 278 8.755696 TTGCAACTACAAATAAAATCATCCAC 57.244 30.769 0.00 0.00 0.00 4.02
278 279 7.319646 TGCAACTACAAATAAAATCATCCACC 58.680 34.615 0.00 0.00 0.00 4.61
279 280 7.039434 TGCAACTACAAATAAAATCATCCACCA 60.039 33.333 0.00 0.00 0.00 4.17
280 281 7.816995 GCAACTACAAATAAAATCATCCACCAA 59.183 33.333 0.00 0.00 0.00 3.67
281 282 9.357652 CAACTACAAATAAAATCATCCACCAAG 57.642 33.333 0.00 0.00 0.00 3.61
282 283 7.547227 ACTACAAATAAAATCATCCACCAAGC 58.453 34.615 0.00 0.00 0.00 4.01
283 284 6.610075 ACAAATAAAATCATCCACCAAGCT 57.390 33.333 0.00 0.00 0.00 3.74
284 285 7.008021 ACAAATAAAATCATCCACCAAGCTT 57.992 32.000 0.00 0.00 0.00 3.74
285 286 6.875195 ACAAATAAAATCATCCACCAAGCTTG 59.125 34.615 19.93 19.93 0.00 4.01
286 287 6.855763 AATAAAATCATCCACCAAGCTTGA 57.144 33.333 28.05 8.10 0.00 3.02
287 288 4.525912 AAAATCATCCACCAAGCTTGAC 57.474 40.909 28.05 0.00 0.00 3.18
288 289 2.885135 ATCATCCACCAAGCTTGACA 57.115 45.000 28.05 8.42 0.00 3.58
289 290 2.189594 TCATCCACCAAGCTTGACAG 57.810 50.000 28.05 13.52 0.00 3.51
290 291 1.421268 TCATCCACCAAGCTTGACAGT 59.579 47.619 28.05 14.20 0.00 3.55
291 292 2.637382 TCATCCACCAAGCTTGACAGTA 59.363 45.455 28.05 9.24 0.00 2.74
292 293 3.264193 TCATCCACCAAGCTTGACAGTAT 59.736 43.478 28.05 11.08 0.00 2.12
293 294 3.334583 TCCACCAAGCTTGACAGTATC 57.665 47.619 28.05 0.00 0.00 2.24
294 295 2.637382 TCCACCAAGCTTGACAGTATCA 59.363 45.455 28.05 2.09 34.65 2.15
295 296 2.744202 CCACCAAGCTTGACAGTATCAC 59.256 50.000 28.05 0.00 36.92 3.06
296 297 3.557898 CCACCAAGCTTGACAGTATCACT 60.558 47.826 28.05 0.00 36.92 3.41
297 298 4.322725 CCACCAAGCTTGACAGTATCACTA 60.323 45.833 28.05 0.00 36.92 2.74
298 299 5.237815 CACCAAGCTTGACAGTATCACTAA 58.762 41.667 28.05 0.00 36.92 2.24
299 300 5.877012 CACCAAGCTTGACAGTATCACTAAT 59.123 40.000 28.05 0.00 36.92 1.73
300 301 6.036517 CACCAAGCTTGACAGTATCACTAATC 59.963 42.308 28.05 0.00 36.92 1.75
301 302 5.525378 CCAAGCTTGACAGTATCACTAATCC 59.475 44.000 28.05 0.00 36.92 3.01
302 303 5.939764 AGCTTGACAGTATCACTAATCCA 57.060 39.130 0.00 0.00 36.92 3.41
303 304 5.665459 AGCTTGACAGTATCACTAATCCAC 58.335 41.667 0.00 0.00 36.92 4.02
304 305 5.423610 AGCTTGACAGTATCACTAATCCACT 59.576 40.000 0.00 0.00 36.92 4.00
305 306 5.521735 GCTTGACAGTATCACTAATCCACTG 59.478 44.000 0.00 0.00 41.83 3.66
306 307 6.628175 GCTTGACAGTATCACTAATCCACTGA 60.628 42.308 7.01 0.00 39.13 3.41
307 308 7.423844 TTGACAGTATCACTAATCCACTGAT 57.576 36.000 7.01 0.00 39.13 2.90
308 309 7.043961 TGACAGTATCACTAATCCACTGATC 57.956 40.000 7.01 0.00 39.13 2.92
309 310 6.836007 TGACAGTATCACTAATCCACTGATCT 59.164 38.462 7.01 0.00 39.13 2.75
310 311 7.343057 TGACAGTATCACTAATCCACTGATCTT 59.657 37.037 7.01 0.00 39.13 2.40
311 312 7.721402 ACAGTATCACTAATCCACTGATCTTC 58.279 38.462 7.01 0.00 39.13 2.87
312 313 7.563188 ACAGTATCACTAATCCACTGATCTTCT 59.437 37.037 7.01 0.00 39.13 2.85
313 314 7.866898 CAGTATCACTAATCCACTGATCTTCTG 59.133 40.741 0.00 0.00 39.13 3.02
314 315 7.782168 AGTATCACTAATCCACTGATCTTCTGA 59.218 37.037 0.00 0.00 0.00 3.27
315 316 6.214191 TCACTAATCCACTGATCTTCTGAC 57.786 41.667 0.00 0.00 0.00 3.51
316 317 5.716703 TCACTAATCCACTGATCTTCTGACA 59.283 40.000 0.00 0.00 0.00 3.58
317 318 6.382282 TCACTAATCCACTGATCTTCTGACAT 59.618 38.462 0.00 0.00 0.00 3.06
318 319 7.561356 TCACTAATCCACTGATCTTCTGACATA 59.439 37.037 0.00 0.00 0.00 2.29
319 320 8.366401 CACTAATCCACTGATCTTCTGACATAT 58.634 37.037 0.00 0.00 0.00 1.78
320 321 8.584157 ACTAATCCACTGATCTTCTGACATATC 58.416 37.037 0.00 0.00 0.00 1.63
321 322 5.798125 TCCACTGATCTTCTGACATATCC 57.202 43.478 0.00 0.00 0.00 2.59
322 323 5.211201 TCCACTGATCTTCTGACATATCCA 58.789 41.667 0.00 0.00 0.00 3.41
323 324 5.069648 TCCACTGATCTTCTGACATATCCAC 59.930 44.000 0.00 0.00 0.00 4.02
324 325 5.070180 CCACTGATCTTCTGACATATCCACT 59.930 44.000 0.00 0.00 0.00 4.00
325 326 5.984323 CACTGATCTTCTGACATATCCACTG 59.016 44.000 0.00 0.00 0.00 3.66
326 327 5.896106 ACTGATCTTCTGACATATCCACTGA 59.104 40.000 0.00 0.00 0.00 3.41
327 328 6.554228 ACTGATCTTCTGACATATCCACTGAT 59.446 38.462 0.00 0.00 34.87 2.90
328 329 6.990798 TGATCTTCTGACATATCCACTGATC 58.009 40.000 0.00 0.00 32.18 2.92
329 330 6.781507 TGATCTTCTGACATATCCACTGATCT 59.218 38.462 0.00 0.00 32.18 2.75
330 331 6.402456 TCTTCTGACATATCCACTGATCTG 57.598 41.667 0.00 0.00 32.78 2.90
331 332 6.131961 TCTTCTGACATATCCACTGATCTGA 58.868 40.000 6.60 0.00 31.42 3.27
332 333 6.781507 TCTTCTGACATATCCACTGATCTGAT 59.218 38.462 6.60 0.00 31.42 2.90
333 334 6.342338 TCTGACATATCCACTGATCTGATG 57.658 41.667 6.60 2.10 31.42 3.07
334 335 4.891260 TGACATATCCACTGATCTGATGC 58.109 43.478 6.60 0.00 31.42 3.91
335 336 4.345837 TGACATATCCACTGATCTGATGCA 59.654 41.667 6.60 0.00 31.42 3.96
336 337 5.163280 TGACATATCCACTGATCTGATGCAA 60.163 40.000 6.60 0.00 31.42 4.08
337 338 5.687780 ACATATCCACTGATCTGATGCAAA 58.312 37.500 6.60 0.00 31.42 3.68
338 339 6.124340 ACATATCCACTGATCTGATGCAAAA 58.876 36.000 6.60 0.00 31.42 2.44
339 340 4.978083 ATCCACTGATCTGATGCAAAAC 57.022 40.909 6.60 0.00 0.00 2.43
340 341 4.025040 TCCACTGATCTGATGCAAAACT 57.975 40.909 6.60 0.00 0.00 2.66
341 342 3.754850 TCCACTGATCTGATGCAAAACTG 59.245 43.478 6.60 0.00 0.00 3.16
342 343 3.119602 CCACTGATCTGATGCAAAACTGG 60.120 47.826 6.60 0.00 0.00 4.00
343 344 2.490903 ACTGATCTGATGCAAAACTGGC 59.509 45.455 6.60 0.00 0.00 4.85
344 345 2.753452 CTGATCTGATGCAAAACTGGCT 59.247 45.455 0.00 0.00 0.00 4.75
345 346 2.490509 TGATCTGATGCAAAACTGGCTG 59.509 45.455 0.00 0.00 0.00 4.85
346 347 0.599558 TCTGATGCAAAACTGGCTGC 59.400 50.000 0.00 0.00 39.09 5.25
347 348 0.601558 CTGATGCAAAACTGGCTGCT 59.398 50.000 0.00 0.00 39.38 4.24
348 349 1.814394 CTGATGCAAAACTGGCTGCTA 59.186 47.619 0.00 0.00 39.38 3.49
349 350 2.229543 CTGATGCAAAACTGGCTGCTAA 59.770 45.455 0.00 0.00 39.38 3.09
350 351 2.627221 TGATGCAAAACTGGCTGCTAAA 59.373 40.909 0.00 0.00 39.38 1.85
351 352 3.258872 TGATGCAAAACTGGCTGCTAAAT 59.741 39.130 0.00 0.00 39.38 1.40
352 353 3.302365 TGCAAAACTGGCTGCTAAATC 57.698 42.857 0.00 0.00 39.38 2.17
353 354 2.029110 TGCAAAACTGGCTGCTAAATCC 60.029 45.455 0.00 0.00 39.38 3.01
354 355 2.029110 GCAAAACTGGCTGCTAAATCCA 60.029 45.455 0.00 0.00 35.62 3.41
355 356 3.578688 CAAAACTGGCTGCTAAATCCAC 58.421 45.455 0.00 0.00 0.00 4.02
356 357 2.887151 AACTGGCTGCTAAATCCACT 57.113 45.000 0.00 0.00 0.00 4.00
357 358 2.119801 ACTGGCTGCTAAATCCACTG 57.880 50.000 0.00 0.00 0.00 3.66
358 359 1.630369 ACTGGCTGCTAAATCCACTGA 59.370 47.619 0.00 0.00 0.00 3.41
359 360 2.012673 CTGGCTGCTAAATCCACTGAC 58.987 52.381 0.00 0.00 0.00 3.51
360 361 1.340017 TGGCTGCTAAATCCACTGACC 60.340 52.381 0.00 0.00 0.00 4.02
361 362 1.065126 GGCTGCTAAATCCACTGACCT 60.065 52.381 0.00 0.00 0.00 3.85
362 363 2.012673 GCTGCTAAATCCACTGACCTG 58.987 52.381 0.00 0.00 0.00 4.00
363 364 2.355108 GCTGCTAAATCCACTGACCTGA 60.355 50.000 0.00 0.00 0.00 3.86
364 365 3.683847 GCTGCTAAATCCACTGACCTGAT 60.684 47.826 0.00 0.00 0.00 2.90
365 366 3.875727 CTGCTAAATCCACTGACCTGATG 59.124 47.826 0.00 0.00 0.00 3.07
366 367 3.264193 TGCTAAATCCACTGACCTGATGT 59.736 43.478 0.00 0.00 0.00 3.06
367 368 3.624861 GCTAAATCCACTGACCTGATGTG 59.375 47.826 0.00 0.00 0.00 3.21
368 369 4.623886 GCTAAATCCACTGACCTGATGTGA 60.624 45.833 0.00 0.00 33.95 3.58
369 370 4.371624 AAATCCACTGACCTGATGTGAA 57.628 40.909 0.00 0.00 33.95 3.18
370 371 4.371624 AATCCACTGACCTGATGTGAAA 57.628 40.909 0.00 0.00 33.95 2.69
371 372 3.126001 TCCACTGACCTGATGTGAAAC 57.874 47.619 0.00 0.00 33.95 2.78
372 373 2.154462 CCACTGACCTGATGTGAAACC 58.846 52.381 0.00 0.00 34.36 3.27
373 374 2.224621 CCACTGACCTGATGTGAAACCT 60.225 50.000 0.00 0.00 34.36 3.50
374 375 3.070018 CACTGACCTGATGTGAAACCTC 58.930 50.000 0.00 0.00 34.36 3.85
375 376 2.975489 ACTGACCTGATGTGAAACCTCT 59.025 45.455 0.00 0.00 34.36 3.69
376 377 3.244353 ACTGACCTGATGTGAAACCTCTG 60.244 47.826 0.00 0.00 34.36 3.35
377 378 2.705658 TGACCTGATGTGAAACCTCTGT 59.294 45.455 0.00 0.00 34.36 3.41
378 379 3.136443 TGACCTGATGTGAAACCTCTGTT 59.864 43.478 0.00 0.00 34.36 3.16
379 380 3.744660 ACCTGATGTGAAACCTCTGTTC 58.255 45.455 0.00 0.00 34.36 3.18
380 381 3.077359 CCTGATGTGAAACCTCTGTTCC 58.923 50.000 0.00 0.00 34.36 3.62
381 382 3.244700 CCTGATGTGAAACCTCTGTTCCT 60.245 47.826 0.00 0.00 34.36 3.36
382 383 3.999663 CTGATGTGAAACCTCTGTTCCTC 59.000 47.826 0.00 0.00 34.36 3.71
383 384 2.930826 TGTGAAACCTCTGTTCCTCC 57.069 50.000 0.00 0.00 34.36 4.30
384 385 2.123589 TGTGAAACCTCTGTTCCTCCA 58.876 47.619 0.00 0.00 34.36 3.86
385 386 2.104792 TGTGAAACCTCTGTTCCTCCAG 59.895 50.000 0.00 0.00 34.36 3.86
386 387 2.104963 GTGAAACCTCTGTTCCTCCAGT 59.895 50.000 0.00 0.00 32.15 4.00
387 388 2.368875 TGAAACCTCTGTTCCTCCAGTC 59.631 50.000 0.00 0.00 32.15 3.51
388 389 2.407340 AACCTCTGTTCCTCCAGTCT 57.593 50.000 0.00 0.00 34.02 3.24
389 390 1.638529 ACCTCTGTTCCTCCAGTCTG 58.361 55.000 0.00 0.00 34.02 3.51
390 391 0.248843 CCTCTGTTCCTCCAGTCTGC 59.751 60.000 0.00 0.00 34.02 4.26
391 392 0.972134 CTCTGTTCCTCCAGTCTGCA 59.028 55.000 0.00 0.00 34.02 4.41
392 393 0.972134 TCTGTTCCTCCAGTCTGCAG 59.028 55.000 7.63 7.63 34.02 4.41
393 394 0.972134 CTGTTCCTCCAGTCTGCAGA 59.028 55.000 13.74 13.74 0.00 4.26
394 395 0.681733 TGTTCCTCCAGTCTGCAGAC 59.318 55.000 34.82 34.82 45.08 3.51
405 406 2.029518 TGCAGACACCAGCAGACG 59.970 61.111 0.00 0.00 35.51 4.18
406 407 2.740055 GCAGACACCAGCAGACGG 60.740 66.667 0.00 0.00 0.00 4.79
407 408 2.047844 CAGACACCAGCAGACGGG 60.048 66.667 0.00 0.00 37.14 5.28
408 409 2.524394 AGACACCAGCAGACGGGT 60.524 61.111 0.00 0.00 46.26 5.28
409 410 2.048127 GACACCAGCAGACGGGTC 60.048 66.667 0.00 0.00 43.13 4.46
410 411 2.524394 ACACCAGCAGACGGGTCT 60.524 61.111 0.00 0.00 43.13 3.85
411 412 1.228769 ACACCAGCAGACGGGTCTA 60.229 57.895 0.21 0.00 43.13 2.59
412 413 0.614979 ACACCAGCAGACGGGTCTAT 60.615 55.000 0.21 0.00 43.13 1.98
413 414 0.537188 CACCAGCAGACGGGTCTATT 59.463 55.000 0.21 0.00 43.13 1.73
414 415 0.824759 ACCAGCAGACGGGTCTATTC 59.175 55.000 0.21 0.00 40.81 1.75
415 416 0.105039 CCAGCAGACGGGTCTATTCC 59.895 60.000 0.21 0.00 37.98 3.01
416 417 1.115467 CAGCAGACGGGTCTATTCCT 58.885 55.000 0.21 0.00 37.98 3.36
417 418 1.067821 CAGCAGACGGGTCTATTCCTC 59.932 57.143 0.21 0.00 37.98 3.71
418 419 0.030908 GCAGACGGGTCTATTCCTCG 59.969 60.000 0.21 0.00 37.98 4.63
419 420 1.390565 CAGACGGGTCTATTCCTCGT 58.609 55.000 0.21 0.00 37.98 4.18
420 421 1.334243 CAGACGGGTCTATTCCTCGTC 59.666 57.143 4.74 4.74 43.94 4.20
421 422 0.667453 GACGGGTCTATTCCTCGTCC 59.333 60.000 1.52 0.00 41.07 4.79
422 423 0.033796 ACGGGTCTATTCCTCGTCCA 60.034 55.000 0.00 0.00 32.20 4.02
423 424 0.384669 CGGGTCTATTCCTCGTCCAC 59.615 60.000 0.00 0.00 0.00 4.02
424 425 1.481871 GGGTCTATTCCTCGTCCACA 58.518 55.000 0.00 0.00 0.00 4.17
425 426 2.040178 GGGTCTATTCCTCGTCCACAT 58.960 52.381 0.00 0.00 0.00 3.21
426 427 2.224066 GGGTCTATTCCTCGTCCACATG 60.224 54.545 0.00 0.00 0.00 3.21
427 428 2.693591 GGTCTATTCCTCGTCCACATGA 59.306 50.000 0.00 0.00 0.00 3.07
428 429 3.132289 GGTCTATTCCTCGTCCACATGAA 59.868 47.826 0.00 0.00 0.00 2.57
429 430 4.113354 GTCTATTCCTCGTCCACATGAAC 58.887 47.826 0.00 0.00 0.00 3.18
430 431 3.767131 TCTATTCCTCGTCCACATGAACA 59.233 43.478 0.00 0.00 0.00 3.18
431 432 3.634397 ATTCCTCGTCCACATGAACAT 57.366 42.857 0.00 0.00 0.00 2.71
432 433 3.417069 TTCCTCGTCCACATGAACATT 57.583 42.857 0.00 0.00 0.00 2.71
433 434 2.698803 TCCTCGTCCACATGAACATTG 58.301 47.619 0.00 0.00 0.00 2.82
434 435 1.131126 CCTCGTCCACATGAACATTGC 59.869 52.381 0.00 0.00 0.00 3.56
435 436 1.131126 CTCGTCCACATGAACATTGCC 59.869 52.381 0.00 0.00 0.00 4.52
436 437 0.880441 CGTCCACATGAACATTGCCA 59.120 50.000 0.00 0.00 0.00 4.92
437 438 1.135603 CGTCCACATGAACATTGCCAG 60.136 52.381 0.00 0.00 0.00 4.85
438 439 1.203052 GTCCACATGAACATTGCCAGG 59.797 52.381 0.00 0.00 0.00 4.45
439 440 0.108520 CCACATGAACATTGCCAGGC 60.109 55.000 3.66 3.66 0.00 4.85
440 441 0.604073 CACATGAACATTGCCAGGCA 59.396 50.000 11.22 11.22 36.47 4.75
441 442 0.892755 ACATGAACATTGCCAGGCAG 59.107 50.000 15.50 6.69 40.61 4.85
442 443 0.892755 CATGAACATTGCCAGGCAGT 59.107 50.000 15.50 9.39 40.61 4.40
456 457 1.800681 GCAGTGGCCAACGATTACC 59.199 57.895 7.24 0.00 0.00 2.85
457 458 0.676782 GCAGTGGCCAACGATTACCT 60.677 55.000 7.24 0.00 0.00 3.08
458 459 1.369625 CAGTGGCCAACGATTACCTC 58.630 55.000 7.24 0.00 0.00 3.85
459 460 0.252197 AGTGGCCAACGATTACCTCC 59.748 55.000 7.24 0.00 0.00 4.30
460 461 0.035820 GTGGCCAACGATTACCTCCA 60.036 55.000 7.24 0.00 0.00 3.86
461 462 0.693622 TGGCCAACGATTACCTCCAA 59.306 50.000 0.61 0.00 0.00 3.53
462 463 1.092348 GGCCAACGATTACCTCCAAC 58.908 55.000 0.00 0.00 0.00 3.77
463 464 1.092348 GCCAACGATTACCTCCAACC 58.908 55.000 0.00 0.00 0.00 3.77
464 465 1.365699 CCAACGATTACCTCCAACCG 58.634 55.000 0.00 0.00 0.00 4.44
465 466 0.725117 CAACGATTACCTCCAACCGC 59.275 55.000 0.00 0.00 0.00 5.68
466 467 0.738412 AACGATTACCTCCAACCGCG 60.738 55.000 0.00 0.00 0.00 6.46
467 468 2.522638 CGATTACCTCCAACCGCGC 61.523 63.158 0.00 0.00 0.00 6.86
468 469 2.124860 ATTACCTCCAACCGCGCC 60.125 61.111 0.00 0.00 0.00 6.53
469 470 3.692370 ATTACCTCCAACCGCGCCC 62.692 63.158 0.00 0.00 0.00 6.13
479 480 4.473520 CCGCGCCCTGTCTCCAAT 62.474 66.667 0.00 0.00 0.00 3.16
480 481 3.197790 CGCGCCCTGTCTCCAATG 61.198 66.667 0.00 0.00 0.00 2.82
481 482 3.512516 GCGCCCTGTCTCCAATGC 61.513 66.667 0.00 0.00 0.00 3.56
482 483 2.825836 CGCCCTGTCTCCAATGCC 60.826 66.667 0.00 0.00 0.00 4.40
483 484 2.440980 GCCCTGTCTCCAATGCCC 60.441 66.667 0.00 0.00 0.00 5.36
484 485 2.276740 CCCTGTCTCCAATGCCCC 59.723 66.667 0.00 0.00 0.00 5.80
485 486 2.615465 CCCTGTCTCCAATGCCCCA 61.615 63.158 0.00 0.00 0.00 4.96
492 493 1.903877 CTCCAATGCCCCAGACGACT 61.904 60.000 0.00 0.00 0.00 4.18
493 494 1.450312 CCAATGCCCCAGACGACTC 60.450 63.158 0.00 0.00 0.00 3.36
494 495 1.811266 CAATGCCCCAGACGACTCG 60.811 63.158 0.00 0.00 0.00 4.18
527 528 2.439507 ACCTCCTTGAAGAAGCAGAACA 59.560 45.455 0.00 0.00 0.00 3.18
529 530 3.470709 CTCCTTGAAGAAGCAGAACACA 58.529 45.455 0.00 0.00 0.00 3.72
532 533 3.004106 CCTTGAAGAAGCAGAACACAAGG 59.996 47.826 0.00 0.00 43.89 3.61
536 537 2.050144 AGAAGCAGAACACAAGGAGGA 58.950 47.619 0.00 0.00 0.00 3.71
537 538 2.038295 AGAAGCAGAACACAAGGAGGAG 59.962 50.000 0.00 0.00 0.00 3.69
538 539 0.689623 AGCAGAACACAAGGAGGAGG 59.310 55.000 0.00 0.00 0.00 4.30
539 540 0.687354 GCAGAACACAAGGAGGAGGA 59.313 55.000 0.00 0.00 0.00 3.71
540 541 1.338579 GCAGAACACAAGGAGGAGGAG 60.339 57.143 0.00 0.00 0.00 3.69
593 594 3.601443 AGATCTCGAAACCCTTCACAG 57.399 47.619 0.00 0.00 0.00 3.66
605 606 1.280133 CCTTCACAGCCTTCTCCATGA 59.720 52.381 0.00 0.00 0.00 3.07
613 614 2.128035 GCCTTCTCCATGACGTAATCG 58.872 52.381 0.00 0.00 43.34 3.34
627 628 4.461992 CGTAATCGTTGGCGGATATTTT 57.538 40.909 0.00 0.00 38.89 1.82
656 657 3.917760 GTGGAGGCGGAGGGATCG 61.918 72.222 0.00 0.00 0.00 3.69
657 658 4.137615 TGGAGGCGGAGGGATCGA 62.138 66.667 0.00 0.00 0.00 3.59
658 659 3.299190 GGAGGCGGAGGGATCGAG 61.299 72.222 0.00 0.00 0.00 4.04
694 695 4.240103 TCGTGGCACTGCTGCAGT 62.240 61.111 28.49 28.49 46.51 4.40
696 697 2.333938 GTGGCACTGCTGCAGTTG 59.666 61.111 31.20 24.87 42.59 3.16
701 702 1.947013 CACTGCTGCAGTTGTGGAG 59.053 57.895 31.20 15.92 42.59 3.86
723 724 1.886222 CGGAGAGCTAGATGGAGGAGG 60.886 61.905 0.00 0.00 0.00 4.30
724 725 1.549950 GGAGAGCTAGATGGAGGAGGG 60.550 61.905 0.00 0.00 0.00 4.30
725 726 1.146982 GAGAGCTAGATGGAGGAGGGT 59.853 57.143 0.00 0.00 0.00 4.34
727 728 0.178975 AGCTAGATGGAGGAGGGTCG 60.179 60.000 0.00 0.00 0.00 4.79
728 729 0.468400 GCTAGATGGAGGAGGGTCGT 60.468 60.000 0.00 0.00 0.00 4.34
754 795 1.978542 CTCTATATTCGCCCGTTCGG 58.021 55.000 4.08 4.08 0.00 4.30
763 804 1.521616 GCCCGTTCGGGTGGTTATA 59.478 57.895 27.49 0.00 46.85 0.98
780 821 1.405872 ATATCCCACAGCGAACGGTA 58.594 50.000 0.00 0.00 0.00 4.02
806 850 4.340097 TCGAAGTTGAGGTTGTAGAGAACA 59.660 41.667 0.00 0.00 35.88 3.18
866 911 2.676839 TGTGTTCGCTGGAAAAACGTTA 59.323 40.909 0.00 0.00 33.05 3.18
891 936 4.661993 TGAACGTCAGCACAATAACATC 57.338 40.909 0.00 0.00 0.00 3.06
963 1013 2.133858 TCTTTTCCCTCCCACTCCTT 57.866 50.000 0.00 0.00 0.00 3.36
1272 1357 2.104451 AGATGGCAAGGTATCTGAGCTG 59.896 50.000 0.00 0.00 35.56 4.24
1276 1361 1.809651 GCAAGGTATCTGAGCTGCTCC 60.810 57.143 25.61 10.75 35.56 4.70
1290 1375 2.355193 GCTCCGGCCTCTCTGACTT 61.355 63.158 0.00 0.00 0.00 3.01
1327 1413 6.252599 TGGTGAATGGTATCTTGATAGCTT 57.747 37.500 17.20 10.50 0.00 3.74
1376 1462 4.765339 AGGTTACAGTTTTGTTCATAGGGC 59.235 41.667 0.00 0.00 38.76 5.19
1377 1463 4.379082 GGTTACAGTTTTGTTCATAGGGCG 60.379 45.833 0.00 0.00 38.76 6.13
1385 1471 0.179108 GTTCATAGGGCGCGAGTCTT 60.179 55.000 12.10 0.00 34.89 3.01
1390 1476 1.654954 TAGGGCGCGAGTCTTGAGTC 61.655 60.000 12.10 0.00 34.89 3.36
1420 1506 5.410924 GCAAATTAGGAAGGGATGTTTGTC 58.589 41.667 0.00 0.00 0.00 3.18
1527 1614 6.799926 AAATTTGAGCTGTGTGTTTGTTTT 57.200 29.167 0.00 0.00 0.00 2.43
1545 1635 2.783828 TTGTTGGGTTGTACATTGCG 57.216 45.000 0.00 0.00 0.00 4.85
1580 1697 1.430632 CATGAGTGCGGACAATGGC 59.569 57.895 10.52 0.00 0.00 4.40
1584 1701 1.915614 GAGTGCGGACAATGGCTGTG 61.916 60.000 10.52 0.00 38.84 3.66
1590 1707 1.620822 GGACAATGGCTGTGGAACTT 58.379 50.000 0.00 0.00 38.84 2.66
1607 1724 1.922447 ACTTCCCATGGCCAATCACTA 59.078 47.619 10.96 0.00 0.00 2.74
1638 1755 3.141398 GCCACACATTCAGAAAGACAGA 58.859 45.455 0.00 0.00 0.00 3.41
1642 1759 5.335426 CCACACATTCAGAAAGACAGATTGG 60.335 44.000 0.00 0.00 0.00 3.16
1643 1760 4.217118 ACACATTCAGAAAGACAGATTGGC 59.783 41.667 0.00 0.00 0.00 4.52
1644 1761 4.458295 CACATTCAGAAAGACAGATTGGCT 59.542 41.667 0.00 0.00 37.28 4.75
1645 1762 4.699257 ACATTCAGAAAGACAGATTGGCTC 59.301 41.667 0.00 0.00 31.94 4.70
1646 1763 2.964740 TCAGAAAGACAGATTGGCTCG 58.035 47.619 0.00 0.00 31.94 5.03
1647 1764 2.562738 TCAGAAAGACAGATTGGCTCGA 59.437 45.455 0.00 0.00 31.94 4.04
1648 1765 2.928757 CAGAAAGACAGATTGGCTCGAG 59.071 50.000 8.45 8.45 31.94 4.04
1649 1766 2.564947 AGAAAGACAGATTGGCTCGAGT 59.435 45.455 15.13 0.00 31.94 4.18
1650 1767 2.663826 AAGACAGATTGGCTCGAGTC 57.336 50.000 10.89 10.89 31.94 3.36
1654 1773 0.869454 CAGATTGGCTCGAGTCTCGC 60.869 60.000 19.37 7.02 40.21 5.03
1670 1789 0.108804 TCGCCTCGATGGAAACTGAC 60.109 55.000 5.24 0.00 38.35 3.51
1672 1791 0.744771 GCCTCGATGGAAACTGACCC 60.745 60.000 5.24 0.00 38.35 4.46
1690 1809 4.717280 TGACCCTGTTTTATTTTGGTTGGT 59.283 37.500 0.00 0.00 0.00 3.67
1700 1819 9.709600 GTTTTATTTTGGTTGGTTTGTATGTTG 57.290 29.630 0.00 0.00 0.00 3.33
1702 1821 4.471904 TTTGGTTGGTTTGTATGTTGCA 57.528 36.364 0.00 0.00 0.00 4.08
1706 1825 3.740321 GGTTGGTTTGTATGTTGCACATG 59.260 43.478 10.77 0.00 39.53 3.21
1712 1831 6.155827 GGTTTGTATGTTGCACATGTACAAT 58.844 36.000 14.44 2.74 39.53 2.71
1733 1852 6.710744 ACAATGAATTCCACGAAGTTAAGACT 59.289 34.615 2.27 0.00 41.61 3.24
1735 1854 5.607477 TGAATTCCACGAAGTTAAGACTGT 58.393 37.500 2.27 0.00 41.61 3.55
1736 1855 5.465390 TGAATTCCACGAAGTTAAGACTGTG 59.535 40.000 2.27 0.00 41.61 3.66
1754 1873 4.003648 CTGTGAAGTTATGACCAGAACCC 58.996 47.826 4.14 0.00 33.31 4.11
1758 1877 4.469945 TGAAGTTATGACCAGAACCCCTAG 59.530 45.833 4.14 0.00 33.31 3.02
1762 1881 2.242882 TGACCAGAACCCCTAGTACC 57.757 55.000 0.00 0.00 0.00 3.34
1763 1882 1.273438 TGACCAGAACCCCTAGTACCC 60.273 57.143 0.00 0.00 0.00 3.69
1764 1883 0.043788 ACCAGAACCCCTAGTACCCC 59.956 60.000 0.00 0.00 0.00 4.95
1765 1884 0.043637 CCAGAACCCCTAGTACCCCA 59.956 60.000 0.00 0.00 0.00 4.96
1766 1885 1.497161 CAGAACCCCTAGTACCCCAG 58.503 60.000 0.00 0.00 0.00 4.45
1767 1886 0.326332 AGAACCCCTAGTACCCCAGC 60.326 60.000 0.00 0.00 0.00 4.85
1768 1887 1.683418 GAACCCCTAGTACCCCAGCG 61.683 65.000 0.00 0.00 0.00 5.18
1769 1888 2.842936 CCCCTAGTACCCCAGCGG 60.843 72.222 0.00 0.00 37.81 5.52
1791 1910 4.141642 GGCCCAGCCTCAAAATGAAATTAT 60.142 41.667 0.00 0.00 46.69 1.28
1794 1913 5.129155 CCCAGCCTCAAAATGAAATTATCCA 59.871 40.000 0.00 0.00 33.67 3.41
1797 1916 6.532657 CAGCCTCAAAATGAAATTATCCACAC 59.467 38.462 0.00 0.00 33.67 3.82
1798 1917 5.812127 GCCTCAAAATGAAATTATCCACACC 59.188 40.000 0.00 0.00 33.67 4.16
1799 1918 6.035843 CCTCAAAATGAAATTATCCACACCG 58.964 40.000 0.00 0.00 33.67 4.94
1800 1919 6.127758 CCTCAAAATGAAATTATCCACACCGA 60.128 38.462 0.00 0.00 33.67 4.69
1801 1920 6.616947 TCAAAATGAAATTATCCACACCGAC 58.383 36.000 0.00 0.00 33.67 4.79
1802 1921 5.576447 AAATGAAATTATCCACACCGACC 57.424 39.130 0.00 0.00 33.67 4.79
1803 1922 2.993937 TGAAATTATCCACACCGACCC 58.006 47.619 0.00 0.00 0.00 4.46
1804 1923 1.937899 GAAATTATCCACACCGACCCG 59.062 52.381 0.00 0.00 0.00 5.28
1805 1924 0.906775 AATTATCCACACCGACCCGT 59.093 50.000 0.00 0.00 0.00 5.28
1806 1925 0.177141 ATTATCCACACCGACCCGTG 59.823 55.000 0.00 0.00 39.75 4.94
1807 1926 2.510064 TTATCCACACCGACCCGTGC 62.510 60.000 0.00 0.00 37.25 5.34
1821 1940 4.717313 GTGCAGGACCCCGAACCC 62.717 72.222 0.00 0.00 0.00 4.11
1824 1943 2.681064 CAGGACCCCGAACCCGTA 60.681 66.667 0.00 0.00 0.00 4.02
1825 1944 2.062177 CAGGACCCCGAACCCGTAT 61.062 63.158 0.00 0.00 0.00 3.06
1826 1945 1.759692 AGGACCCCGAACCCGTATC 60.760 63.158 0.00 0.00 0.00 2.24
1827 1946 2.800541 GGACCCCGAACCCGTATCC 61.801 68.421 0.00 0.00 0.00 2.59
1828 1947 3.142820 GACCCCGAACCCGTATCCG 62.143 68.421 0.00 0.00 0.00 4.18
1829 1948 4.597215 CCCCGAACCCGTATCCGC 62.597 72.222 0.00 0.00 0.00 5.54
1830 1949 4.936823 CCCGAACCCGTATCCGCG 62.937 72.222 0.00 0.00 0.00 6.46
1832 1951 4.564116 CGAACCCGTATCCGCGCT 62.564 66.667 5.56 0.00 0.00 5.92
1833 1952 2.657620 GAACCCGTATCCGCGCTC 60.658 66.667 5.56 0.00 0.00 5.03
1834 1953 4.217159 AACCCGTATCCGCGCTCC 62.217 66.667 5.56 0.00 0.00 4.70
1846 1986 3.753434 CGCTCCAGCACCGAGACT 61.753 66.667 0.00 0.00 42.21 3.24
1848 1988 2.936912 GCTCCAGCACCGAGACTGT 61.937 63.158 0.00 0.00 41.59 3.55
1864 2004 5.234466 AGACTGTCTTGGTTTGATTAGCT 57.766 39.130 4.06 0.00 0.00 3.32
1865 2005 5.625150 AGACTGTCTTGGTTTGATTAGCTT 58.375 37.500 4.06 0.00 0.00 3.74
1879 2019 5.178797 TGATTAGCTTGTTACTCTCCTTGC 58.821 41.667 0.00 0.00 0.00 4.01
1880 2020 4.617253 TTAGCTTGTTACTCTCCTTGCA 57.383 40.909 0.00 0.00 0.00 4.08
1884 2024 2.462456 TGTTACTCTCCTTGCAGCAG 57.538 50.000 0.00 0.00 0.00 4.24
1888 2028 0.906756 ACTCTCCTTGCAGCAGCCTA 60.907 55.000 0.00 0.00 41.13 3.93
1902 2042 1.072331 CAGCCTACTGGTTGTTGGACT 59.928 52.381 0.83 0.00 42.85 3.85
1911 2051 4.202419 ACTGGTTGTTGGACTGCTGTTATA 60.202 41.667 0.00 0.00 0.00 0.98
1915 2055 6.113411 GGTTGTTGGACTGCTGTTATATACT 58.887 40.000 0.00 0.00 0.00 2.12
1916 2056 7.093245 TGGTTGTTGGACTGCTGTTATATACTA 60.093 37.037 0.00 0.00 0.00 1.82
1917 2057 7.224167 GGTTGTTGGACTGCTGTTATATACTAC 59.776 40.741 0.00 0.92 0.00 2.73
1918 2058 7.655521 TGTTGGACTGCTGTTATATACTACT 57.344 36.000 0.00 0.00 0.00 2.57
1919 2059 8.756486 TGTTGGACTGCTGTTATATACTACTA 57.244 34.615 0.00 0.00 0.00 1.82
1920 2060 8.627403 TGTTGGACTGCTGTTATATACTACTAC 58.373 37.037 0.00 0.00 0.00 2.73
1921 2061 7.756395 TGGACTGCTGTTATATACTACTACC 57.244 40.000 0.00 0.00 0.00 3.18
1922 2062 7.524290 TGGACTGCTGTTATATACTACTACCT 58.476 38.462 0.00 0.00 0.00 3.08
1923 2063 7.664731 TGGACTGCTGTTATATACTACTACCTC 59.335 40.741 0.00 0.00 0.00 3.85
1924 2064 7.884354 GGACTGCTGTTATATACTACTACCTCT 59.116 40.741 0.00 0.00 0.00 3.69
1925 2065 8.624367 ACTGCTGTTATATACTACTACCTCTG 57.376 38.462 0.00 0.00 0.00 3.35
1926 2066 8.219178 ACTGCTGTTATATACTACTACCTCTGT 58.781 37.037 0.00 0.00 0.00 3.41
1927 2067 9.722184 CTGCTGTTATATACTACTACCTCTGTA 57.278 37.037 0.00 0.00 0.00 2.74
1928 2068 9.499479 TGCTGTTATATACTACTACCTCTGTAC 57.501 37.037 0.00 0.00 0.00 2.90
1929 2069 8.945057 GCTGTTATATACTACTACCTCTGTACC 58.055 40.741 0.00 0.00 0.00 3.34
1936 2076 6.930068 ACTACTACCTCTGTACCAAAATGT 57.070 37.500 0.00 0.00 0.00 2.71
1937 2077 9.705103 ATACTACTACCTCTGTACCAAAATGTA 57.295 33.333 0.00 0.00 0.00 2.29
1938 2078 8.426569 ACTACTACCTCTGTACCAAAATGTAA 57.573 34.615 0.00 0.00 0.00 2.41
1939 2079 8.529476 ACTACTACCTCTGTACCAAAATGTAAG 58.471 37.037 0.00 0.00 0.00 2.34
1940 2080 7.549147 ACTACCTCTGTACCAAAATGTAAGA 57.451 36.000 0.00 0.00 0.00 2.10
1941 2081 7.384477 ACTACCTCTGTACCAAAATGTAAGAC 58.616 38.462 0.00 0.00 0.00 3.01
1942 2082 5.235516 ACCTCTGTACCAAAATGTAAGACG 58.764 41.667 0.00 0.00 0.00 4.18
1943 2083 5.221581 ACCTCTGTACCAAAATGTAAGACGT 60.222 40.000 0.00 0.00 0.00 4.34
1944 2084 5.699458 CCTCTGTACCAAAATGTAAGACGTT 59.301 40.000 0.00 0.00 0.00 3.99
1945 2085 6.204108 CCTCTGTACCAAAATGTAAGACGTTT 59.796 38.462 0.00 0.00 38.84 3.60
1946 2086 7.255001 CCTCTGTACCAAAATGTAAGACGTTTT 60.255 37.037 4.14 4.14 45.25 2.43
1947 2087 7.987649 TCTGTACCAAAATGTAAGACGTTTTT 58.012 30.769 6.77 0.00 42.72 1.94
1948 2088 7.911205 TCTGTACCAAAATGTAAGACGTTTTTG 59.089 33.333 11.96 11.96 42.72 2.44
1949 2089 5.959652 ACCAAAATGTAAGACGTTTTTGC 57.040 34.783 13.03 5.44 42.72 3.68
1950 2090 5.411781 ACCAAAATGTAAGACGTTTTTGCA 58.588 33.333 13.03 10.07 42.72 4.08
1951 2091 5.518487 ACCAAAATGTAAGACGTTTTTGCAG 59.482 36.000 13.03 5.81 42.72 4.41
1952 2092 5.518487 CCAAAATGTAAGACGTTTTTGCAGT 59.482 36.000 13.03 7.03 42.72 4.40
1953 2093 6.035542 CCAAAATGTAAGACGTTTTTGCAGTT 59.964 34.615 13.03 11.54 42.72 3.16
1954 2094 6.806120 AAATGTAAGACGTTTTTGCAGTTC 57.194 33.333 10.13 0.00 33.87 3.01
1955 2095 4.948608 TGTAAGACGTTTTTGCAGTTCA 57.051 36.364 0.00 0.00 0.00 3.18
1956 2096 5.298197 TGTAAGACGTTTTTGCAGTTCAA 57.702 34.783 0.00 0.00 0.00 2.69
1957 2097 5.885881 TGTAAGACGTTTTTGCAGTTCAAT 58.114 33.333 0.00 0.00 34.12 2.57
1958 2098 6.326375 TGTAAGACGTTTTTGCAGTTCAATT 58.674 32.000 0.00 0.00 34.12 2.32
1959 2099 6.809196 TGTAAGACGTTTTTGCAGTTCAATTT 59.191 30.769 0.00 0.00 34.12 1.82
1960 2100 5.701029 AGACGTTTTTGCAGTTCAATTTG 57.299 34.783 0.00 0.00 34.12 2.32
1961 2101 5.406649 AGACGTTTTTGCAGTTCAATTTGA 58.593 33.333 0.00 0.00 34.12 2.69
1962 2102 5.866633 AGACGTTTTTGCAGTTCAATTTGAA 59.133 32.000 7.74 7.74 34.12 2.69
1977 2117 3.502191 TTTGAACTGCAAAAGCGTCTT 57.498 38.095 0.00 0.00 43.18 3.01
1978 2118 2.473530 TGAACTGCAAAAGCGTCTTG 57.526 45.000 0.00 0.00 0.00 3.02
1991 2131 3.122937 GCGTCTTGCATTTTGGTAGAG 57.877 47.619 0.00 0.00 45.45 2.43
1992 2132 2.742053 GCGTCTTGCATTTTGGTAGAGA 59.258 45.455 0.00 0.00 45.45 3.10
1993 2133 3.181516 GCGTCTTGCATTTTGGTAGAGAG 60.182 47.826 0.00 0.00 45.45 3.20
1999 2139 7.489757 GTCTTGCATTTTGGTAGAGAGTACTAG 59.510 40.741 0.00 0.00 0.00 2.57
2188 2328 7.544804 TCATGCAGTCTAGGTATGATAATGT 57.455 36.000 0.00 0.00 33.36 2.71
2231 2371 1.134037 AGTAACAAAACGGCTGGGACA 60.134 47.619 0.00 0.00 0.00 4.02
2232 2372 1.677052 GTAACAAAACGGCTGGGACAA 59.323 47.619 0.00 0.00 38.70 3.18
2263 2403 1.263217 GCGTTCCGTGAACATGAAAGT 59.737 47.619 14.43 0.00 42.05 2.66
2394 2537 5.598417 AGGTTTCATAACTGGTCTGCTTTTT 59.402 36.000 0.00 0.00 34.59 1.94
2553 2696 5.396750 TTTTGTTTCAAATTAACAGCCGC 57.603 34.783 0.00 0.00 36.89 6.53
2618 2761 9.436957 CTATTTCTGGACTGTAATGTTACTTGT 57.563 33.333 4.71 3.90 34.77 3.16
2741 2887 2.430465 CTGTCTACCTGCATTGCAACT 58.570 47.619 13.18 3.01 38.41 3.16
2765 2919 1.196581 TGCGTGCATGTGTGTGTAATC 59.803 47.619 7.93 0.00 0.00 1.75
2870 3024 4.118410 CCGATGAGGAAGATTCTGAAGTG 58.882 47.826 0.00 0.00 45.00 3.16
2888 3042 4.785346 AGTGGATGATGCTATGGAAACT 57.215 40.909 0.00 0.00 0.00 2.66
2911 3065 1.280457 GACAAGGGGACTGATGAGGT 58.720 55.000 0.00 0.00 42.68 3.85
2939 3093 1.153449 GGTCGACGATGCCATGGAA 60.153 57.895 18.40 4.87 0.00 3.53
3031 3186 7.120923 TGAACTCTGGTTTCTAGTAACTGTT 57.879 36.000 11.46 10.84 35.58 3.16
3032 3187 7.562135 TGAACTCTGGTTTCTAGTAACTGTTT 58.438 34.615 11.46 4.59 35.58 2.83
3033 3188 7.494625 TGAACTCTGGTTTCTAGTAACTGTTTG 59.505 37.037 11.46 2.96 35.58 2.93
3034 3189 7.120923 ACTCTGGTTTCTAGTAACTGTTTGA 57.879 36.000 11.46 3.74 0.00 2.69
3035 3190 7.210873 ACTCTGGTTTCTAGTAACTGTTTGAG 58.789 38.462 11.46 12.46 0.00 3.02
3037 3192 7.208080 TCTGGTTTCTAGTAACTGTTTGAGAC 58.792 38.462 11.46 0.00 0.00 3.36
3038 3193 6.880484 TGGTTTCTAGTAACTGTTTGAGACA 58.120 36.000 11.46 0.00 36.65 3.41
3039 3194 6.759827 TGGTTTCTAGTAACTGTTTGAGACAC 59.240 38.462 11.46 3.14 33.82 3.67
3078 3245 6.264832 TCTGTTTTGCTGTGTCATAAACAAG 58.735 36.000 0.00 0.00 40.31 3.16
3101 3269 7.307131 AGGAAGTTTTGATCATGGTGAAAAT 57.693 32.000 6.61 0.00 0.00 1.82
3111 3279 7.549839 TGATCATGGTGAAAATTCCTCAAATC 58.450 34.615 0.00 0.00 0.00 2.17
3147 3315 9.349713 TGTTGGTTATTATATCAGGAATCAACC 57.650 33.333 6.60 0.00 34.76 3.77
3148 3316 9.349713 GTTGGTTATTATATCAGGAATCAACCA 57.650 33.333 0.00 0.00 40.69 3.67
3172 3340 6.579666 TGCCATTCCAGCTAATCATATTTC 57.420 37.500 0.00 0.00 0.00 2.17
3203 3371 4.970662 AACAAATTCATCATCGGTCAGG 57.029 40.909 0.00 0.00 0.00 3.86
3226 3394 5.393027 GGTTAGATGGCATACACCAAACAAG 60.393 44.000 14.42 0.00 44.65 3.16
3384 3552 7.807977 AATATGTAAACGAGATGGCAGAAAT 57.192 32.000 0.00 0.00 0.00 2.17
3408 3576 6.472686 AGCCTGTCGAATTCTAACTAGATT 57.527 37.500 3.52 0.00 31.40 2.40
3411 3579 8.138712 AGCCTGTCGAATTCTAACTAGATTAAG 58.861 37.037 3.52 0.00 31.40 1.85
3453 3623 6.183360 ACGAAGAACCAAGTAAAAAGGGAAAG 60.183 38.462 0.00 0.00 0.00 2.62
3454 3624 6.038936 CGAAGAACCAAGTAAAAAGGGAAAGA 59.961 38.462 0.00 0.00 0.00 2.52
3459 3629 6.432581 ACCAAGTAAAAAGGGAAAGAACTCT 58.567 36.000 0.00 0.00 0.00 3.24
3505 3675 4.214971 GCACATCTTCAGCAATATACAGGG 59.785 45.833 0.00 0.00 0.00 4.45
3508 3678 4.712051 TCTTCAGCAATATACAGGGCAT 57.288 40.909 0.00 0.00 0.00 4.40
3671 3853 0.812811 CATGCTCCTGTCCACATCGG 60.813 60.000 0.00 0.00 0.00 4.18
3724 3906 4.602995 CGTAGAGGAATGTGTAGAAGAGC 58.397 47.826 0.00 0.00 0.00 4.09
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
11 12 2.743928 GGGAAGTGCAGACGGCTG 60.744 66.667 15.93 15.93 45.15 4.85
12 13 4.021925 GGGGAAGTGCAGACGGCT 62.022 66.667 0.00 0.00 45.15 5.52
13 14 3.628646 ATGGGGAAGTGCAGACGGC 62.629 63.158 0.00 0.00 45.13 5.68
14 15 1.450312 GATGGGGAAGTGCAGACGG 60.450 63.158 0.00 0.00 0.00 4.79
15 16 0.321564 TTGATGGGGAAGTGCAGACG 60.322 55.000 0.00 0.00 0.00 4.18
16 17 1.541588 GTTTGATGGGGAAGTGCAGAC 59.458 52.381 0.00 0.00 0.00 3.51
17 18 1.144708 TGTTTGATGGGGAAGTGCAGA 59.855 47.619 0.00 0.00 0.00 4.26
18 19 1.619654 TGTTTGATGGGGAAGTGCAG 58.380 50.000 0.00 0.00 0.00 4.41
19 20 2.170166 GATGTTTGATGGGGAAGTGCA 58.830 47.619 0.00 0.00 0.00 4.57
20 21 1.478105 GGATGTTTGATGGGGAAGTGC 59.522 52.381 0.00 0.00 0.00 4.40
21 22 2.756760 CTGGATGTTTGATGGGGAAGTG 59.243 50.000 0.00 0.00 0.00 3.16
22 23 2.885554 GCTGGATGTTTGATGGGGAAGT 60.886 50.000 0.00 0.00 0.00 3.01
23 24 1.753073 GCTGGATGTTTGATGGGGAAG 59.247 52.381 0.00 0.00 0.00 3.46
24 25 1.619432 GGCTGGATGTTTGATGGGGAA 60.619 52.381 0.00 0.00 0.00 3.97
25 26 0.033208 GGCTGGATGTTTGATGGGGA 60.033 55.000 0.00 0.00 0.00 4.81
26 27 0.032813 AGGCTGGATGTTTGATGGGG 60.033 55.000 0.00 0.00 0.00 4.96
27 28 2.734755 TAGGCTGGATGTTTGATGGG 57.265 50.000 0.00 0.00 0.00 4.00
28 29 2.954318 CCTTAGGCTGGATGTTTGATGG 59.046 50.000 0.00 0.00 0.00 3.51
29 30 2.360165 GCCTTAGGCTGGATGTTTGATG 59.640 50.000 17.16 0.00 46.69 3.07
30 31 2.659428 GCCTTAGGCTGGATGTTTGAT 58.341 47.619 17.16 0.00 46.69 2.57
31 32 2.128771 GCCTTAGGCTGGATGTTTGA 57.871 50.000 17.16 0.00 46.69 2.69
38 39 9.548109 CTTATTTAAGATGGGCCTTAGGCTGGA 62.548 44.444 23.50 7.51 41.12 3.86
39 40 7.471876 CTTATTTAAGATGGGCCTTAGGCTGG 61.472 46.154 23.50 0.00 41.12 4.85
40 41 5.474876 CTTATTTAAGATGGGCCTTAGGCTG 59.525 44.000 23.50 0.00 41.12 4.85
41 42 5.458215 CCTTATTTAAGATGGGCCTTAGGCT 60.458 44.000 23.50 2.68 41.12 4.58
42 43 4.767409 CCTTATTTAAGATGGGCCTTAGGC 59.233 45.833 16.07 16.07 40.84 3.93
43 44 5.325239 CCCTTATTTAAGATGGGCCTTAGG 58.675 45.833 4.53 0.00 35.33 2.69
50 51 7.004086 TGTATTGAGCCCTTATTTAAGATGGG 58.996 38.462 6.22 6.22 40.74 4.00
51 52 8.641498 ATGTATTGAGCCCTTATTTAAGATGG 57.359 34.615 0.00 0.00 35.33 3.51
52 53 9.512588 AGATGTATTGAGCCCTTATTTAAGATG 57.487 33.333 0.00 0.00 35.33 2.90
54 55 9.998106 GTAGATGTATTGAGCCCTTATTTAAGA 57.002 33.333 0.00 0.00 35.33 2.10
55 56 9.778741 TGTAGATGTATTGAGCCCTTATTTAAG 57.221 33.333 0.00 0.00 0.00 1.85
58 59 9.726438 GTATGTAGATGTATTGAGCCCTTATTT 57.274 33.333 0.00 0.00 0.00 1.40
59 60 8.322091 GGTATGTAGATGTATTGAGCCCTTATT 58.678 37.037 0.00 0.00 0.00 1.40
60 61 7.680310 AGGTATGTAGATGTATTGAGCCCTTAT 59.320 37.037 0.00 0.00 0.00 1.73
61 62 7.016914 AGGTATGTAGATGTATTGAGCCCTTA 58.983 38.462 0.00 0.00 0.00 2.69
62 63 5.846714 AGGTATGTAGATGTATTGAGCCCTT 59.153 40.000 0.00 0.00 0.00 3.95
63 64 5.407049 AGGTATGTAGATGTATTGAGCCCT 58.593 41.667 0.00 0.00 0.00 5.19
64 65 5.746990 AGGTATGTAGATGTATTGAGCCC 57.253 43.478 0.00 0.00 0.00 5.19
65 66 9.555727 TTTTTAGGTATGTAGATGTATTGAGCC 57.444 33.333 0.00 0.00 0.00 4.70
116 117 9.442047 CCCCATAATAGAGTTGACATTATCTTC 57.558 37.037 0.00 0.00 0.00 2.87
117 118 8.949421 ACCCCATAATAGAGTTGACATTATCTT 58.051 33.333 0.00 0.00 0.00 2.40
118 119 8.511748 ACCCCATAATAGAGTTGACATTATCT 57.488 34.615 0.00 0.00 0.00 1.98
119 120 9.003658 CAACCCCATAATAGAGTTGACATTATC 57.996 37.037 0.00 0.00 40.12 1.75
120 121 7.944554 CCAACCCCATAATAGAGTTGACATTAT 59.055 37.037 2.91 0.00 40.12 1.28
121 122 7.128109 TCCAACCCCATAATAGAGTTGACATTA 59.872 37.037 2.91 0.00 40.12 1.90
122 123 6.069088 TCCAACCCCATAATAGAGTTGACATT 60.069 38.462 2.91 0.00 40.12 2.71
123 124 5.431731 TCCAACCCCATAATAGAGTTGACAT 59.568 40.000 2.91 0.00 40.12 3.06
124 125 4.785914 TCCAACCCCATAATAGAGTTGACA 59.214 41.667 2.91 0.00 40.12 3.58
125 126 5.367945 TCCAACCCCATAATAGAGTTGAC 57.632 43.478 2.91 0.00 40.12 3.18
126 127 6.272324 CCTATCCAACCCCATAATAGAGTTGA 59.728 42.308 2.91 0.00 40.12 3.18
127 128 6.476378 CCTATCCAACCCCATAATAGAGTTG 58.524 44.000 0.00 0.00 38.00 3.16
128 129 5.551977 CCCTATCCAACCCCATAATAGAGTT 59.448 44.000 0.00 0.00 0.00 3.01
129 130 5.101529 CCCTATCCAACCCCATAATAGAGT 58.898 45.833 0.00 0.00 0.00 3.24
130 131 4.475016 CCCCTATCCAACCCCATAATAGAG 59.525 50.000 0.00 0.00 0.00 2.43
131 132 4.444611 CCCCTATCCAACCCCATAATAGA 58.555 47.826 0.00 0.00 0.00 1.98
132 133 3.527665 CCCCCTATCCAACCCCATAATAG 59.472 52.174 0.00 0.00 0.00 1.73
133 134 3.547903 CCCCCTATCCAACCCCATAATA 58.452 50.000 0.00 0.00 0.00 0.98
134 135 2.368170 CCCCCTATCCAACCCCATAAT 58.632 52.381 0.00 0.00 0.00 1.28
135 136 1.841334 CCCCCTATCCAACCCCATAA 58.159 55.000 0.00 0.00 0.00 1.90
136 137 0.774491 GCCCCCTATCCAACCCCATA 60.774 60.000 0.00 0.00 0.00 2.74
137 138 2.091283 GCCCCCTATCCAACCCCAT 61.091 63.158 0.00 0.00 0.00 4.00
138 139 2.698406 GCCCCCTATCCAACCCCA 60.698 66.667 0.00 0.00 0.00 4.96
139 140 3.508685 GGCCCCCTATCCAACCCC 61.509 72.222 0.00 0.00 0.00 4.95
140 141 1.664956 AATGGCCCCCTATCCAACCC 61.665 60.000 0.00 0.00 35.75 4.11
141 142 0.469892 CAATGGCCCCCTATCCAACC 60.470 60.000 0.00 0.00 35.75 3.77
142 143 1.115326 GCAATGGCCCCCTATCCAAC 61.115 60.000 0.00 0.00 35.75 3.77
143 144 1.232792 GCAATGGCCCCCTATCCAA 59.767 57.895 0.00 0.00 35.75 3.53
144 145 2.934369 GCAATGGCCCCCTATCCA 59.066 61.111 0.00 0.00 36.70 3.41
154 155 4.529731 GAGGGAGGGGGCAATGGC 62.530 72.222 0.00 0.00 40.13 4.40
155 156 4.195334 CGAGGGAGGGGGCAATGG 62.195 72.222 0.00 0.00 0.00 3.16
156 157 4.883354 GCGAGGGAGGGGGCAATG 62.883 72.222 0.00 0.00 0.00 2.82
161 162 3.787001 GAAGTGCGAGGGAGGGGG 61.787 72.222 0.00 0.00 0.00 5.40
162 163 3.003173 TGAAGTGCGAGGGAGGGG 61.003 66.667 0.00 0.00 0.00 4.79
163 164 2.266055 GTGAAGTGCGAGGGAGGG 59.734 66.667 0.00 0.00 0.00 4.30
164 165 2.266055 GGTGAAGTGCGAGGGAGG 59.734 66.667 0.00 0.00 0.00 4.30
165 166 2.125912 CGGTGAAGTGCGAGGGAG 60.126 66.667 0.00 0.00 0.00 4.30
166 167 2.915659 ACGGTGAAGTGCGAGGGA 60.916 61.111 0.00 0.00 0.00 4.20
167 168 2.149803 TACACGGTGAAGTGCGAGGG 62.150 60.000 16.29 0.00 45.45 4.30
168 169 0.108804 ATACACGGTGAAGTGCGAGG 60.109 55.000 16.29 0.00 45.45 4.63
169 170 2.554806 TATACACGGTGAAGTGCGAG 57.445 50.000 16.29 0.00 45.45 5.03
170 171 3.513680 AATATACACGGTGAAGTGCGA 57.486 42.857 16.29 0.00 45.45 5.10
171 172 5.900339 ATAAATATACACGGTGAAGTGCG 57.100 39.130 16.29 0.00 45.45 5.34
201 202 9.398538 GGGATACATGTACTTAACCATAAACAA 57.601 33.333 7.96 0.00 39.74 2.83
202 203 7.711772 CGGGATACATGTACTTAACCATAAACA 59.288 37.037 7.96 0.00 39.74 2.83
203 204 7.172019 CCGGGATACATGTACTTAACCATAAAC 59.828 40.741 7.96 0.00 39.74 2.01
204 205 7.218614 CCGGGATACATGTACTTAACCATAAA 58.781 38.462 7.96 0.00 39.74 1.40
205 206 6.239657 CCCGGGATACATGTACTTAACCATAA 60.240 42.308 18.48 0.00 39.74 1.90
206 207 5.246656 CCCGGGATACATGTACTTAACCATA 59.753 44.000 18.48 0.00 39.74 2.74
207 208 4.041198 CCCGGGATACATGTACTTAACCAT 59.959 45.833 18.48 0.00 39.74 3.55
208 209 3.388676 CCCGGGATACATGTACTTAACCA 59.611 47.826 18.48 0.00 39.74 3.67
209 210 3.642848 TCCCGGGATACATGTACTTAACC 59.357 47.826 22.63 6.96 39.74 2.85
210 211 4.099881 TGTCCCGGGATACATGTACTTAAC 59.900 45.833 29.73 9.52 39.74 2.01
211 212 4.288398 TGTCCCGGGATACATGTACTTAA 58.712 43.478 29.73 0.00 39.74 1.85
212 213 3.913509 TGTCCCGGGATACATGTACTTA 58.086 45.455 29.73 0.00 39.74 2.24
213 214 2.754465 TGTCCCGGGATACATGTACTT 58.246 47.619 29.73 0.00 39.74 2.24
214 215 2.464796 TGTCCCGGGATACATGTACT 57.535 50.000 29.73 0.00 39.74 2.73
215 216 3.463944 CTTTGTCCCGGGATACATGTAC 58.536 50.000 29.73 12.49 39.74 2.90
216 217 2.158871 GCTTTGTCCCGGGATACATGTA 60.159 50.000 29.73 8.27 39.74 2.29
217 218 1.408266 GCTTTGTCCCGGGATACATGT 60.408 52.381 29.73 2.69 39.74 3.21
218 219 1.308998 GCTTTGTCCCGGGATACATG 58.691 55.000 29.73 16.76 39.74 3.21
219 220 0.916086 TGCTTTGTCCCGGGATACAT 59.084 50.000 29.73 0.00 39.74 2.29
220 221 0.035820 GTGCTTTGTCCCGGGATACA 60.036 55.000 29.73 19.57 39.74 2.29
221 222 0.746923 GGTGCTTTGTCCCGGGATAC 60.747 60.000 29.73 16.72 0.00 2.24
222 223 1.605453 GGTGCTTTGTCCCGGGATA 59.395 57.895 29.73 23.44 0.00 2.59
223 224 2.355115 GGTGCTTTGTCCCGGGAT 59.645 61.111 29.73 0.00 0.00 3.85
224 225 3.961414 GGGTGCTTTGTCCCGGGA 61.961 66.667 22.63 22.63 33.97 5.14
225 226 4.278513 TGGGTGCTTTGTCCCGGG 62.279 66.667 16.85 16.85 46.13 5.73
226 227 2.119484 TAGTGGGTGCTTTGTCCCGG 62.119 60.000 0.00 0.00 46.13 5.73
227 228 0.953960 GTAGTGGGTGCTTTGTCCCG 60.954 60.000 0.00 0.00 46.13 5.14
228 229 0.953960 CGTAGTGGGTGCTTTGTCCC 60.954 60.000 0.00 0.00 43.67 4.46
229 230 1.574702 GCGTAGTGGGTGCTTTGTCC 61.575 60.000 0.00 0.00 0.00 4.02
230 231 0.602905 AGCGTAGTGGGTGCTTTGTC 60.603 55.000 0.00 0.00 34.80 3.18
231 232 0.682852 TAGCGTAGTGGGTGCTTTGT 59.317 50.000 0.00 0.00 40.06 2.83
232 233 1.076332 GTAGCGTAGTGGGTGCTTTG 58.924 55.000 0.00 0.00 40.06 2.77
233 234 0.974383 AGTAGCGTAGTGGGTGCTTT 59.026 50.000 0.00 0.00 40.06 3.51
234 235 0.974383 AAGTAGCGTAGTGGGTGCTT 59.026 50.000 0.00 0.00 40.06 3.91
235 236 0.246635 CAAGTAGCGTAGTGGGTGCT 59.753 55.000 0.00 0.00 42.58 4.40
236 237 1.359459 GCAAGTAGCGTAGTGGGTGC 61.359 60.000 0.00 0.00 0.00 5.01
237 238 2.750815 GCAAGTAGCGTAGTGGGTG 58.249 57.895 0.00 0.00 0.00 4.61
247 248 8.964420 TGATTTTATTTGTAGTTGCAAGTAGC 57.036 30.769 14.34 9.87 45.96 3.58
250 251 8.584157 TGGATGATTTTATTTGTAGTTGCAAGT 58.416 29.630 12.28 12.28 0.00 3.16
251 252 8.863049 GTGGATGATTTTATTTGTAGTTGCAAG 58.137 33.333 0.00 0.00 0.00 4.01
252 253 7.816995 GGTGGATGATTTTATTTGTAGTTGCAA 59.183 33.333 0.00 0.00 0.00 4.08
253 254 7.039434 TGGTGGATGATTTTATTTGTAGTTGCA 60.039 33.333 0.00 0.00 0.00 4.08
254 255 7.319646 TGGTGGATGATTTTATTTGTAGTTGC 58.680 34.615 0.00 0.00 0.00 4.17
255 256 9.357652 CTTGGTGGATGATTTTATTTGTAGTTG 57.642 33.333 0.00 0.00 0.00 3.16
256 257 8.034804 GCTTGGTGGATGATTTTATTTGTAGTT 58.965 33.333 0.00 0.00 0.00 2.24
257 258 7.397192 AGCTTGGTGGATGATTTTATTTGTAGT 59.603 33.333 0.00 0.00 0.00 2.73
258 259 7.775120 AGCTTGGTGGATGATTTTATTTGTAG 58.225 34.615 0.00 0.00 0.00 2.74
259 260 7.716799 AGCTTGGTGGATGATTTTATTTGTA 57.283 32.000 0.00 0.00 0.00 2.41
260 261 6.610075 AGCTTGGTGGATGATTTTATTTGT 57.390 33.333 0.00 0.00 0.00 2.83
261 262 7.063780 GTCAAGCTTGGTGGATGATTTTATTTG 59.936 37.037 25.73 0.00 0.00 2.32
262 263 7.099120 GTCAAGCTTGGTGGATGATTTTATTT 58.901 34.615 25.73 0.00 0.00 1.40
263 264 6.211184 TGTCAAGCTTGGTGGATGATTTTATT 59.789 34.615 25.73 0.00 0.00 1.40
264 265 5.716228 TGTCAAGCTTGGTGGATGATTTTAT 59.284 36.000 25.73 0.00 0.00 1.40
265 266 5.076182 TGTCAAGCTTGGTGGATGATTTTA 58.924 37.500 25.73 0.00 0.00 1.52
266 267 3.896888 TGTCAAGCTTGGTGGATGATTTT 59.103 39.130 25.73 0.00 0.00 1.82
267 268 3.499338 TGTCAAGCTTGGTGGATGATTT 58.501 40.909 25.73 0.00 0.00 2.17
268 269 3.087031 CTGTCAAGCTTGGTGGATGATT 58.913 45.455 25.73 0.00 0.00 2.57
269 270 2.040813 ACTGTCAAGCTTGGTGGATGAT 59.959 45.455 25.73 1.84 0.00 2.45
270 271 1.421268 ACTGTCAAGCTTGGTGGATGA 59.579 47.619 25.73 1.88 0.00 2.92
271 272 1.901591 ACTGTCAAGCTTGGTGGATG 58.098 50.000 25.73 12.49 0.00 3.51
272 273 3.264193 TGATACTGTCAAGCTTGGTGGAT 59.736 43.478 25.73 17.00 32.78 3.41
273 274 2.637382 TGATACTGTCAAGCTTGGTGGA 59.363 45.455 25.73 13.19 32.78 4.02
274 275 2.744202 GTGATACTGTCAAGCTTGGTGG 59.256 50.000 25.73 16.86 38.90 4.61
275 276 3.668447 AGTGATACTGTCAAGCTTGGTG 58.332 45.455 25.73 17.26 38.90 4.17
276 277 5.483685 TTAGTGATACTGTCAAGCTTGGT 57.516 39.130 25.73 17.67 38.90 3.67
277 278 5.525378 GGATTAGTGATACTGTCAAGCTTGG 59.475 44.000 25.73 12.70 38.90 3.61
278 279 6.036517 GTGGATTAGTGATACTGTCAAGCTTG 59.963 42.308 20.81 20.81 38.90 4.01
279 280 6.070538 AGTGGATTAGTGATACTGTCAAGCTT 60.071 38.462 0.00 0.00 38.90 3.74
280 281 5.423610 AGTGGATTAGTGATACTGTCAAGCT 59.576 40.000 0.00 0.00 38.90 3.74
281 282 5.521735 CAGTGGATTAGTGATACTGTCAAGC 59.478 44.000 0.00 0.00 38.90 4.01
282 283 6.867550 TCAGTGGATTAGTGATACTGTCAAG 58.132 40.000 0.00 0.00 38.90 3.02
283 284 6.850752 TCAGTGGATTAGTGATACTGTCAA 57.149 37.500 0.00 0.00 38.90 3.18
284 285 6.836007 AGATCAGTGGATTAGTGATACTGTCA 59.164 38.462 0.00 0.00 46.88 3.58
285 286 7.283625 AGATCAGTGGATTAGTGATACTGTC 57.716 40.000 0.00 0.00 46.88 3.51
286 287 7.563188 AGAAGATCAGTGGATTAGTGATACTGT 59.437 37.037 0.00 0.00 46.88 3.55
287 288 7.866898 CAGAAGATCAGTGGATTAGTGATACTG 59.133 40.741 0.00 0.00 46.88 2.74
288 289 7.782168 TCAGAAGATCAGTGGATTAGTGATACT 59.218 37.037 0.00 0.00 46.88 2.12
289 290 7.865385 GTCAGAAGATCAGTGGATTAGTGATAC 59.135 40.741 0.00 0.00 46.88 2.24
290 291 7.561356 TGTCAGAAGATCAGTGGATTAGTGATA 59.439 37.037 0.00 0.00 46.88 2.15
292 293 5.716703 TGTCAGAAGATCAGTGGATTAGTGA 59.283 40.000 0.00 0.00 42.68 3.41
293 294 5.970592 TGTCAGAAGATCAGTGGATTAGTG 58.029 41.667 0.00 0.00 32.67 2.74
294 295 6.805016 ATGTCAGAAGATCAGTGGATTAGT 57.195 37.500 0.00 0.00 32.67 2.24
295 296 8.034215 GGATATGTCAGAAGATCAGTGGATTAG 58.966 40.741 0.00 0.00 32.67 1.73
296 297 7.510343 TGGATATGTCAGAAGATCAGTGGATTA 59.490 37.037 0.00 0.00 32.67 1.75
297 298 6.328410 TGGATATGTCAGAAGATCAGTGGATT 59.672 38.462 0.00 0.00 32.67 3.01
298 299 5.842874 TGGATATGTCAGAAGATCAGTGGAT 59.157 40.000 0.00 0.00 36.13 3.41
299 300 5.069648 GTGGATATGTCAGAAGATCAGTGGA 59.930 44.000 0.00 0.00 0.00 4.02
300 301 5.070180 AGTGGATATGTCAGAAGATCAGTGG 59.930 44.000 0.00 0.00 0.00 4.00
301 302 5.984323 CAGTGGATATGTCAGAAGATCAGTG 59.016 44.000 0.00 0.00 0.00 3.66
302 303 5.896106 TCAGTGGATATGTCAGAAGATCAGT 59.104 40.000 0.00 0.00 0.00 3.41
303 304 6.402456 TCAGTGGATATGTCAGAAGATCAG 57.598 41.667 0.00 0.00 0.00 2.90
304 305 6.781507 AGATCAGTGGATATGTCAGAAGATCA 59.218 38.462 12.89 0.00 32.67 2.92
305 306 7.039853 TCAGATCAGTGGATATGTCAGAAGATC 60.040 40.741 0.00 0.00 42.14 2.75
306 307 6.781507 TCAGATCAGTGGATATGTCAGAAGAT 59.218 38.462 0.00 0.00 42.14 2.40
307 308 6.131961 TCAGATCAGTGGATATGTCAGAAGA 58.868 40.000 0.00 0.00 42.14 2.87
308 309 6.402456 TCAGATCAGTGGATATGTCAGAAG 57.598 41.667 0.00 0.00 42.14 2.85
309 310 6.740681 GCATCAGATCAGTGGATATGTCAGAA 60.741 42.308 0.00 0.00 42.14 3.02
310 311 5.279356 GCATCAGATCAGTGGATATGTCAGA 60.279 44.000 0.00 0.00 42.14 3.27
311 312 4.930405 GCATCAGATCAGTGGATATGTCAG 59.070 45.833 0.00 0.00 42.14 3.51
312 313 4.345837 TGCATCAGATCAGTGGATATGTCA 59.654 41.667 0.00 0.00 42.14 3.58
313 314 4.891260 TGCATCAGATCAGTGGATATGTC 58.109 43.478 0.00 0.00 42.14 3.06
314 315 4.968971 TGCATCAGATCAGTGGATATGT 57.031 40.909 0.00 0.00 42.14 2.29
315 316 6.262496 AGTTTTGCATCAGATCAGTGGATATG 59.738 38.462 0.00 0.00 42.71 1.78
316 317 6.262496 CAGTTTTGCATCAGATCAGTGGATAT 59.738 38.462 0.00 0.00 32.67 1.63
317 318 5.587443 CAGTTTTGCATCAGATCAGTGGATA 59.413 40.000 0.00 0.00 32.67 2.59
318 319 4.398358 CAGTTTTGCATCAGATCAGTGGAT 59.602 41.667 0.00 0.00 36.13 3.41
319 320 3.754850 CAGTTTTGCATCAGATCAGTGGA 59.245 43.478 0.00 0.00 0.00 4.02
320 321 3.119602 CCAGTTTTGCATCAGATCAGTGG 60.120 47.826 0.00 0.00 0.00 4.00
321 322 3.672511 GCCAGTTTTGCATCAGATCAGTG 60.673 47.826 0.00 0.00 0.00 3.66
322 323 2.490903 GCCAGTTTTGCATCAGATCAGT 59.509 45.455 0.00 0.00 0.00 3.41
323 324 2.753452 AGCCAGTTTTGCATCAGATCAG 59.247 45.455 0.00 0.00 0.00 2.90
324 325 2.490509 CAGCCAGTTTTGCATCAGATCA 59.509 45.455 0.00 0.00 0.00 2.92
325 326 2.734492 GCAGCCAGTTTTGCATCAGATC 60.734 50.000 0.00 0.00 40.02 2.75
326 327 1.203994 GCAGCCAGTTTTGCATCAGAT 59.796 47.619 0.00 0.00 40.02 2.90
327 328 0.599558 GCAGCCAGTTTTGCATCAGA 59.400 50.000 0.00 0.00 40.02 3.27
328 329 0.601558 AGCAGCCAGTTTTGCATCAG 59.398 50.000 0.00 0.00 42.67 2.90
329 330 1.908344 TAGCAGCCAGTTTTGCATCA 58.092 45.000 0.00 0.00 42.67 3.07
330 331 3.302365 TTTAGCAGCCAGTTTTGCATC 57.698 42.857 0.00 0.00 42.67 3.91
331 332 3.368739 GGATTTAGCAGCCAGTTTTGCAT 60.369 43.478 0.00 0.00 42.67 3.96
332 333 2.029110 GGATTTAGCAGCCAGTTTTGCA 60.029 45.455 0.00 0.00 42.67 4.08
333 334 2.029110 TGGATTTAGCAGCCAGTTTTGC 60.029 45.455 0.00 0.00 40.57 3.68
334 335 3.256631 AGTGGATTTAGCAGCCAGTTTTG 59.743 43.478 0.00 0.00 31.45 2.44
335 336 3.256631 CAGTGGATTTAGCAGCCAGTTTT 59.743 43.478 0.00 0.00 33.19 2.43
336 337 2.821969 CAGTGGATTTAGCAGCCAGTTT 59.178 45.455 0.00 0.00 33.19 2.66
337 338 2.040278 TCAGTGGATTTAGCAGCCAGTT 59.960 45.455 0.00 0.00 33.19 3.16
338 339 1.630369 TCAGTGGATTTAGCAGCCAGT 59.370 47.619 0.00 0.00 35.79 4.00
339 340 2.012673 GTCAGTGGATTTAGCAGCCAG 58.987 52.381 0.00 0.00 31.18 4.85
340 341 1.340017 GGTCAGTGGATTTAGCAGCCA 60.340 52.381 0.00 0.00 0.00 4.75
341 342 1.065126 AGGTCAGTGGATTTAGCAGCC 60.065 52.381 0.00 0.00 0.00 4.85
342 343 2.012673 CAGGTCAGTGGATTTAGCAGC 58.987 52.381 0.00 0.00 0.00 5.25
343 344 3.616956 TCAGGTCAGTGGATTTAGCAG 57.383 47.619 0.00 0.00 0.00 4.24
344 345 3.264193 ACATCAGGTCAGTGGATTTAGCA 59.736 43.478 0.00 0.00 0.00 3.49
345 346 3.624861 CACATCAGGTCAGTGGATTTAGC 59.375 47.826 0.00 0.00 0.00 3.09
346 347 5.089970 TCACATCAGGTCAGTGGATTTAG 57.910 43.478 0.00 0.00 34.17 1.85
347 348 5.497464 TTCACATCAGGTCAGTGGATTTA 57.503 39.130 0.00 0.00 34.17 1.40
348 349 4.371624 TTCACATCAGGTCAGTGGATTT 57.628 40.909 0.00 0.00 34.17 2.17
349 350 4.074970 GTTTCACATCAGGTCAGTGGATT 58.925 43.478 0.00 0.00 34.17 3.01
350 351 3.560025 GGTTTCACATCAGGTCAGTGGAT 60.560 47.826 0.00 0.00 34.17 3.41
351 352 2.224523 GGTTTCACATCAGGTCAGTGGA 60.225 50.000 0.00 0.00 34.17 4.02
352 353 2.154462 GGTTTCACATCAGGTCAGTGG 58.846 52.381 0.00 0.00 34.17 4.00
353 354 3.070018 GAGGTTTCACATCAGGTCAGTG 58.930 50.000 0.00 0.00 34.67 3.66
354 355 2.975489 AGAGGTTTCACATCAGGTCAGT 59.025 45.455 0.00 0.00 30.12 3.41
355 356 3.244353 ACAGAGGTTTCACATCAGGTCAG 60.244 47.826 0.00 0.00 30.12 3.51
356 357 2.705658 ACAGAGGTTTCACATCAGGTCA 59.294 45.455 0.00 0.00 30.12 4.02
357 358 3.409026 ACAGAGGTTTCACATCAGGTC 57.591 47.619 0.00 0.00 30.12 3.85
358 359 3.496870 GGAACAGAGGTTTCACATCAGGT 60.497 47.826 0.00 0.00 37.36 4.00
359 360 3.077359 GGAACAGAGGTTTCACATCAGG 58.923 50.000 0.00 0.00 37.36 3.86
360 361 3.999663 GAGGAACAGAGGTTTCACATCAG 59.000 47.826 0.00 0.00 37.36 2.90
361 362 3.244561 GGAGGAACAGAGGTTTCACATCA 60.245 47.826 0.00 0.00 37.36 3.07
362 363 3.244561 TGGAGGAACAGAGGTTTCACATC 60.245 47.826 0.00 0.00 37.36 3.06
363 364 2.711009 TGGAGGAACAGAGGTTTCACAT 59.289 45.455 0.00 0.00 37.36 3.21
364 365 2.104792 CTGGAGGAACAGAGGTTTCACA 59.895 50.000 0.00 0.00 40.97 3.58
365 366 2.104963 ACTGGAGGAACAGAGGTTTCAC 59.895 50.000 0.00 0.00 40.97 3.18
366 367 2.368875 GACTGGAGGAACAGAGGTTTCA 59.631 50.000 0.00 0.00 40.97 2.69
367 368 2.635427 AGACTGGAGGAACAGAGGTTTC 59.365 50.000 0.00 0.00 40.97 2.78
368 369 2.370189 CAGACTGGAGGAACAGAGGTTT 59.630 50.000 0.00 0.00 40.97 3.27
369 370 1.974236 CAGACTGGAGGAACAGAGGTT 59.026 52.381 0.00 0.00 40.97 3.50
370 371 1.638529 CAGACTGGAGGAACAGAGGT 58.361 55.000 0.00 0.00 40.97 3.85
371 372 0.248843 GCAGACTGGAGGAACAGAGG 59.751 60.000 4.26 0.00 40.97 3.69
372 373 0.972134 TGCAGACTGGAGGAACAGAG 59.028 55.000 4.26 0.00 40.97 3.35
373 374 0.972134 CTGCAGACTGGAGGAACAGA 59.028 55.000 15.79 0.00 40.97 3.41
374 375 0.972134 TCTGCAGACTGGAGGAACAG 59.028 55.000 22.19 10.91 44.03 3.16
375 376 0.681733 GTCTGCAGACTGGAGGAACA 59.318 55.000 34.54 1.66 41.65 3.18
376 377 0.681733 TGTCTGCAGACTGGAGGAAC 59.318 55.000 38.81 17.16 44.99 3.62
377 378 0.681733 GTGTCTGCAGACTGGAGGAA 59.318 55.000 38.81 20.22 44.99 3.36
378 379 1.188219 GGTGTCTGCAGACTGGAGGA 61.188 60.000 38.81 20.91 44.99 3.71
379 380 1.294780 GGTGTCTGCAGACTGGAGG 59.705 63.158 38.81 3.59 44.99 4.30
380 381 0.037512 CTGGTGTCTGCAGACTGGAG 60.038 60.000 38.81 27.96 44.99 3.86
381 382 2.052779 CTGGTGTCTGCAGACTGGA 58.947 57.895 38.81 22.29 44.99 3.86
382 383 1.670406 GCTGGTGTCTGCAGACTGG 60.670 63.158 38.81 27.11 44.99 4.00
383 384 1.070275 TGCTGGTGTCTGCAGACTG 59.930 57.895 38.81 27.51 44.99 3.51
384 385 3.554716 TGCTGGTGTCTGCAGACT 58.445 55.556 38.81 0.00 44.99 3.24
388 389 2.029518 CGTCTGCTGGTGTCTGCA 59.970 61.111 0.00 0.00 43.86 4.41
389 390 2.740055 CCGTCTGCTGGTGTCTGC 60.740 66.667 0.00 0.00 38.18 4.26
390 391 2.047844 CCCGTCTGCTGGTGTCTG 60.048 66.667 0.00 0.00 0.00 3.51
391 392 2.524394 ACCCGTCTGCTGGTGTCT 60.524 61.111 0.00 0.00 30.74 3.41
392 393 1.248785 TAGACCCGTCTGCTGGTGTC 61.249 60.000 7.63 0.00 40.71 3.67
393 394 0.614979 ATAGACCCGTCTGCTGGTGT 60.615 55.000 7.63 0.00 40.71 4.16
394 395 0.537188 AATAGACCCGTCTGCTGGTG 59.463 55.000 7.63 0.00 40.71 4.17
395 396 0.824759 GAATAGACCCGTCTGCTGGT 59.175 55.000 7.63 0.00 40.71 4.00
396 397 0.105039 GGAATAGACCCGTCTGCTGG 59.895 60.000 7.63 0.00 40.71 4.85
397 398 1.067821 GAGGAATAGACCCGTCTGCTG 59.932 57.143 7.63 0.00 40.71 4.41
398 399 1.404843 GAGGAATAGACCCGTCTGCT 58.595 55.000 7.63 0.00 40.71 4.24
399 400 0.030908 CGAGGAATAGACCCGTCTGC 59.969 60.000 7.63 0.00 40.71 4.26
400 401 1.334243 GACGAGGAATAGACCCGTCTG 59.666 57.143 7.63 0.00 43.33 3.51
401 402 1.677942 GACGAGGAATAGACCCGTCT 58.322 55.000 15.62 2.41 43.33 4.18
402 403 0.667453 GGACGAGGAATAGACCCGTC 59.333 60.000 15.02 15.02 44.53 4.79
403 404 0.033796 TGGACGAGGAATAGACCCGT 60.034 55.000 0.00 0.00 38.66 5.28
404 405 0.384669 GTGGACGAGGAATAGACCCG 59.615 60.000 0.00 0.00 0.00 5.28
405 406 1.481871 TGTGGACGAGGAATAGACCC 58.518 55.000 0.00 0.00 0.00 4.46
406 407 2.693591 TCATGTGGACGAGGAATAGACC 59.306 50.000 0.00 0.00 0.00 3.85
407 408 4.113354 GTTCATGTGGACGAGGAATAGAC 58.887 47.826 0.00 0.00 0.00 2.59
408 409 3.767131 TGTTCATGTGGACGAGGAATAGA 59.233 43.478 0.00 0.00 0.00 1.98
409 410 4.123497 TGTTCATGTGGACGAGGAATAG 57.877 45.455 0.00 0.00 0.00 1.73
410 411 4.753516 ATGTTCATGTGGACGAGGAATA 57.246 40.909 0.00 0.00 0.00 1.75
411 412 3.634397 ATGTTCATGTGGACGAGGAAT 57.366 42.857 0.00 0.00 0.00 3.01
412 413 3.073678 CAATGTTCATGTGGACGAGGAA 58.926 45.455 0.00 0.00 0.00 3.36
413 414 2.698803 CAATGTTCATGTGGACGAGGA 58.301 47.619 0.00 0.00 0.00 3.71
414 415 1.131126 GCAATGTTCATGTGGACGAGG 59.869 52.381 0.00 0.00 0.00 4.63
415 416 1.131126 GGCAATGTTCATGTGGACGAG 59.869 52.381 0.00 0.00 0.00 4.18
416 417 1.164411 GGCAATGTTCATGTGGACGA 58.836 50.000 0.00 0.00 0.00 4.20
417 418 0.880441 TGGCAATGTTCATGTGGACG 59.120 50.000 0.00 0.00 0.00 4.79
418 419 1.203052 CCTGGCAATGTTCATGTGGAC 59.797 52.381 0.00 0.00 0.00 4.02
419 420 1.548081 CCTGGCAATGTTCATGTGGA 58.452 50.000 0.00 0.00 0.00 4.02
420 421 0.108520 GCCTGGCAATGTTCATGTGG 60.109 55.000 15.17 0.00 0.00 4.17
421 422 0.604073 TGCCTGGCAATGTTCATGTG 59.396 50.000 21.08 0.00 34.76 3.21
422 423 0.892755 CTGCCTGGCAATGTTCATGT 59.107 50.000 23.51 0.00 38.41 3.21
423 424 0.892755 ACTGCCTGGCAATGTTCATG 59.107 50.000 23.51 10.67 38.41 3.07
424 425 0.892755 CACTGCCTGGCAATGTTCAT 59.107 50.000 23.51 0.00 38.41 2.57
425 426 1.180456 CCACTGCCTGGCAATGTTCA 61.180 55.000 26.28 0.79 38.41 3.18
426 427 1.588082 CCACTGCCTGGCAATGTTC 59.412 57.895 26.28 0.00 38.41 3.18
427 428 3.781760 CCACTGCCTGGCAATGTT 58.218 55.556 26.28 7.57 38.41 2.71
438 439 0.676782 AGGTAATCGTTGGCCACTGC 60.677 55.000 3.88 0.00 0.00 4.40
439 440 1.369625 GAGGTAATCGTTGGCCACTG 58.630 55.000 3.88 0.00 0.00 3.66
440 441 0.252197 GGAGGTAATCGTTGGCCACT 59.748 55.000 3.88 0.00 0.00 4.00
441 442 0.035820 TGGAGGTAATCGTTGGCCAC 60.036 55.000 3.88 0.00 0.00 5.01
442 443 0.693622 TTGGAGGTAATCGTTGGCCA 59.306 50.000 0.00 0.00 0.00 5.36
443 444 1.092348 GTTGGAGGTAATCGTTGGCC 58.908 55.000 0.00 0.00 0.00 5.36
444 445 1.092348 GGTTGGAGGTAATCGTTGGC 58.908 55.000 0.00 0.00 0.00 4.52
445 446 1.365699 CGGTTGGAGGTAATCGTTGG 58.634 55.000 0.00 0.00 29.93 3.77
446 447 0.725117 GCGGTTGGAGGTAATCGTTG 59.275 55.000 0.00 0.00 36.58 4.10
447 448 0.738412 CGCGGTTGGAGGTAATCGTT 60.738 55.000 0.00 0.00 36.58 3.85
448 449 1.153706 CGCGGTTGGAGGTAATCGT 60.154 57.895 0.00 0.00 36.58 3.73
449 450 2.522638 GCGCGGTTGGAGGTAATCG 61.523 63.158 8.83 0.00 37.24 3.34
450 451 2.178235 GGCGCGGTTGGAGGTAATC 61.178 63.158 8.83 0.00 0.00 1.75
451 452 2.124860 GGCGCGGTTGGAGGTAAT 60.125 61.111 8.83 0.00 0.00 1.89
452 453 4.397832 GGGCGCGGTTGGAGGTAA 62.398 66.667 8.83 0.00 0.00 2.85
462 463 4.473520 ATTGGAGACAGGGCGCGG 62.474 66.667 8.83 0.00 44.54 6.46
463 464 3.197790 CATTGGAGACAGGGCGCG 61.198 66.667 0.00 0.00 44.54 6.86
464 465 3.512516 GCATTGGAGACAGGGCGC 61.513 66.667 0.00 0.00 44.54 6.53
465 466 2.825836 GGCATTGGAGACAGGGCG 60.826 66.667 0.00 0.00 44.54 6.13
466 467 2.440980 GGGCATTGGAGACAGGGC 60.441 66.667 0.00 0.00 44.54 5.19
467 468 2.276740 GGGGCATTGGAGACAGGG 59.723 66.667 0.00 0.00 44.54 4.45
468 469 1.077212 CTGGGGCATTGGAGACAGG 60.077 63.158 0.00 0.00 44.54 4.00
469 470 0.393537 GTCTGGGGCATTGGAGACAG 60.394 60.000 0.00 0.00 44.54 3.51
470 471 1.685224 GTCTGGGGCATTGGAGACA 59.315 57.895 0.00 0.00 35.82 3.41
471 472 1.450312 CGTCTGGGGCATTGGAGAC 60.450 63.158 0.00 0.00 32.99 3.36
472 473 1.612146 TCGTCTGGGGCATTGGAGA 60.612 57.895 0.00 0.00 0.00 3.71
473 474 1.450312 GTCGTCTGGGGCATTGGAG 60.450 63.158 0.00 0.00 0.00 3.86
474 475 1.899437 GAGTCGTCTGGGGCATTGGA 61.899 60.000 0.00 0.00 0.00 3.53
475 476 1.450312 GAGTCGTCTGGGGCATTGG 60.450 63.158 0.00 0.00 0.00 3.16
476 477 1.811266 CGAGTCGTCTGGGGCATTG 60.811 63.158 3.82 0.00 0.00 2.82
477 478 2.579201 CGAGTCGTCTGGGGCATT 59.421 61.111 3.82 0.00 0.00 3.56
478 479 4.148825 GCGAGTCGTCTGGGGCAT 62.149 66.667 15.08 0.00 0.00 4.40
481 482 3.649277 CTTGGCGAGTCGTCTGGGG 62.649 68.421 19.25 2.02 30.55 4.96
482 483 2.125912 CTTGGCGAGTCGTCTGGG 60.126 66.667 19.25 4.53 30.55 4.45
483 484 0.734253 CTTCTTGGCGAGTCGTCTGG 60.734 60.000 19.25 10.79 30.55 3.86
484 485 0.734253 CCTTCTTGGCGAGTCGTCTG 60.734 60.000 19.25 11.20 30.55 3.51
485 486 1.587054 CCTTCTTGGCGAGTCGTCT 59.413 57.895 19.25 0.00 30.55 4.18
506 507 2.439507 TGTTCTGCTTCTTCAAGGAGGT 59.560 45.455 0.00 0.00 45.79 3.85
509 510 3.558931 TGTGTTCTGCTTCTTCAAGGA 57.441 42.857 0.00 0.00 0.00 3.36
527 528 2.022625 TGATGATCCTCCTCCTCCTTGT 60.023 50.000 0.00 0.00 0.00 3.16
529 530 3.051496 TCTTGATGATCCTCCTCCTCCTT 60.051 47.826 0.00 0.00 0.00 3.36
532 533 4.806640 GATCTTGATGATCCTCCTCCTC 57.193 50.000 0.00 0.00 44.34 3.71
593 594 2.128035 CGATTACGTCATGGAGAAGGC 58.872 52.381 0.00 0.00 34.56 4.35
653 654 1.821936 CTGCAGCTTCCTCCTCGAT 59.178 57.895 0.00 0.00 0.00 3.59
656 657 1.449956 CTGCTGCAGCTTCCTCCTC 60.450 63.158 36.61 7.74 42.66 3.71
657 658 2.669849 CTGCTGCAGCTTCCTCCT 59.330 61.111 36.61 0.00 42.66 3.69
658 659 2.438075 CCTGCTGCAGCTTCCTCC 60.438 66.667 36.61 9.26 42.66 4.30
688 689 3.052082 CCGCCTCCACAACTGCAG 61.052 66.667 13.48 13.48 0.00 4.41
694 695 1.304962 TAGCTCTCCGCCTCCACAA 60.305 57.895 0.00 0.00 40.39 3.33
696 697 0.825840 ATCTAGCTCTCCGCCTCCAC 60.826 60.000 0.00 0.00 40.39 4.02
701 702 1.531739 CCTCCATCTAGCTCTCCGCC 61.532 65.000 0.00 0.00 40.39 6.13
712 713 1.381872 CCACGACCCTCCTCCATCT 60.382 63.158 0.00 0.00 0.00 2.90
763 804 1.515954 CTACCGTTCGCTGTGGGAT 59.484 57.895 0.00 0.00 0.00 3.85
780 821 2.891580 TCTACAACCTCAACTTCGAGCT 59.108 45.455 0.00 0.00 0.00 4.09
806 850 1.927210 CGCACGAATCTTAGCGCAT 59.073 52.632 11.47 0.00 43.80 4.73
866 911 1.896220 ATTGTGCTGACGTTCATGGT 58.104 45.000 0.00 0.00 0.00 3.55
891 936 4.202441 GCCCAGCCCATATATTATCACAG 58.798 47.826 0.00 0.00 0.00 3.66
943 992 2.367947 AGGAGTGGGAGGGAAAAGAT 57.632 50.000 0.00 0.00 0.00 2.40
989 1039 4.760047 GGTCCATCGTGCGCTGGT 62.760 66.667 9.73 0.00 33.51 4.00
992 1042 3.381983 TCTGGTCCATCGTGCGCT 61.382 61.111 9.73 0.00 0.00 5.92
995 1045 3.188786 GCGTCTGGTCCATCGTGC 61.189 66.667 14.94 4.64 0.00 5.34
996 1046 2.509336 GGCGTCTGGTCCATCGTG 60.509 66.667 14.94 0.00 0.00 4.35
997 1047 4.129737 CGGCGTCTGGTCCATCGT 62.130 66.667 14.94 0.00 0.00 3.73
1254 1339 0.107508 GCAGCTCAGATACCTTGCCA 60.108 55.000 0.00 0.00 0.00 4.92
1272 1357 2.291457 GAAGTCAGAGAGGCCGGAGC 62.291 65.000 5.05 0.00 38.76 4.70
1276 1361 1.066908 GATGAGAAGTCAGAGAGGCCG 59.933 57.143 0.00 0.00 35.66 6.13
1290 1375 1.278537 TCACCATGCCACAGATGAGA 58.721 50.000 0.00 0.00 0.00 3.27
1327 1413 0.179137 CGCTGACGATGAAGCTACCA 60.179 55.000 0.00 0.00 43.93 3.25
1334 1420 0.179113 TATGCTGCGCTGACGATGAA 60.179 50.000 19.32 0.00 43.93 2.57
1376 1462 1.512310 GACGGACTCAAGACTCGCG 60.512 63.158 0.00 0.00 0.00 5.87
1377 1463 1.512310 CGACGGACTCAAGACTCGC 60.512 63.158 0.00 0.00 0.00 5.03
1385 1471 0.388778 TAATTTGCGCGACGGACTCA 60.389 50.000 12.10 0.00 0.00 3.41
1390 1476 0.026285 CTTCCTAATTTGCGCGACGG 59.974 55.000 12.10 0.00 0.00 4.79
1420 1506 0.038744 ATGGGAGGCTGACAAGTTGG 59.961 55.000 7.96 0.00 0.00 3.77
1500 1586 7.698836 ACAAACACACAGCTCAAATTTAATC 57.301 32.000 0.00 0.00 0.00 1.75
1501 1587 8.491331 AAACAAACACACAGCTCAAATTTAAT 57.509 26.923 0.00 0.00 0.00 1.40
1527 1614 0.312416 GCGCAATGTACAACCCAACA 59.688 50.000 0.30 0.00 0.00 3.33
1545 1635 2.489971 CATGGAATTCATTGCCCATGC 58.510 47.619 7.93 0.00 46.26 4.06
1580 1697 0.967380 GGCCATGGGAAGTTCCACAG 60.967 60.000 23.33 11.33 39.97 3.66
1584 1701 1.114627 GATTGGCCATGGGAAGTTCC 58.885 55.000 15.13 13.99 35.23 3.62
1590 1707 2.948115 CAATAGTGATTGGCCATGGGA 58.052 47.619 15.13 0.00 39.10 4.37
1615 1732 4.040339 TCTGTCTTTCTGAATGTGTGGCTA 59.960 41.667 3.59 0.00 0.00 3.93
1618 1735 5.335426 CCAATCTGTCTTTCTGAATGTGTGG 60.335 44.000 3.59 0.00 0.00 4.17
1627 1744 2.928757 CTCGAGCCAATCTGTCTTTCTG 59.071 50.000 0.00 0.00 0.00 3.02
1630 1747 2.564947 AGACTCGAGCCAATCTGTCTTT 59.435 45.455 13.61 0.00 36.58 2.52
1646 1763 0.456221 TTTCCATCGAGGCGAGACTC 59.544 55.000 0.00 0.00 39.91 3.36
1647 1764 0.173708 GTTTCCATCGAGGCGAGACT 59.826 55.000 0.00 0.00 39.91 3.24
1648 1765 0.173708 AGTTTCCATCGAGGCGAGAC 59.826 55.000 0.00 0.00 39.91 3.36
1649 1766 0.173481 CAGTTTCCATCGAGGCGAGA 59.827 55.000 0.00 0.00 39.91 4.04
1650 1767 0.173481 TCAGTTTCCATCGAGGCGAG 59.827 55.000 0.00 0.00 39.91 5.03
1654 1773 0.905357 AGGGTCAGTTTCCATCGAGG 59.095 55.000 0.00 0.00 39.47 4.63
1670 1789 5.883115 ACAAACCAACCAAAATAAAACAGGG 59.117 36.000 0.00 0.00 0.00 4.45
1672 1791 9.103861 ACATACAAACCAACCAAAATAAAACAG 57.896 29.630 0.00 0.00 0.00 3.16
1700 1819 4.097714 CGTGGAATTCATTGTACATGTGC 58.902 43.478 9.11 8.01 0.00 4.57
1702 1821 5.705441 ACTTCGTGGAATTCATTGTACATGT 59.295 36.000 7.93 2.69 0.00 3.21
1706 1825 7.955864 GTCTTAACTTCGTGGAATTCATTGTAC 59.044 37.037 7.93 0.00 0.00 2.90
1712 1831 5.465390 CACAGTCTTAACTTCGTGGAATTCA 59.535 40.000 7.93 0.00 31.71 2.57
1733 1852 3.244770 GGGGTTCTGGTCATAACTTCACA 60.245 47.826 0.53 0.00 0.00 3.58
1735 1854 3.256704 AGGGGTTCTGGTCATAACTTCA 58.743 45.455 0.53 0.00 0.00 3.02
1736 1855 4.470304 ACTAGGGGTTCTGGTCATAACTTC 59.530 45.833 0.00 0.00 31.01 3.01
1754 1873 3.547513 GGCCGCTGGGGTACTAGG 61.548 72.222 12.70 0.00 38.44 3.02
1769 1888 3.339253 AATTTCATTTTGAGGCTGGGC 57.661 42.857 0.00 0.00 0.00 5.36
1774 1893 5.812127 GGTGTGGATAATTTCATTTTGAGGC 59.188 40.000 0.00 0.00 0.00 4.70
1777 1896 6.349777 GGTCGGTGTGGATAATTTCATTTTGA 60.350 38.462 0.00 0.00 0.00 2.69
1804 1923 4.717313 GGGTTCGGGGTCCTGCAC 62.717 72.222 0.00 0.00 0.00 4.57
1807 1926 2.024590 GATACGGGTTCGGGGTCCTG 62.025 65.000 0.00 0.00 41.39 3.86
1808 1927 1.759692 GATACGGGTTCGGGGTCCT 60.760 63.158 0.00 0.00 41.39 3.85
1809 1928 2.800541 GGATACGGGTTCGGGGTCC 61.801 68.421 0.00 0.00 41.39 4.46
1810 1929 2.817424 GGATACGGGTTCGGGGTC 59.183 66.667 0.00 0.00 41.39 4.46
1822 1941 2.962253 GTGCTGGAGCGCGGATAC 60.962 66.667 8.83 0.00 45.83 2.24
1830 1949 2.125753 CAGTCTCGGTGCTGGAGC 60.126 66.667 0.00 0.00 42.50 4.70
1831 1950 1.214062 GACAGTCTCGGTGCTGGAG 59.786 63.158 0.00 0.00 37.07 3.86
1832 1951 0.827925 AAGACAGTCTCGGTGCTGGA 60.828 55.000 2.72 0.00 37.07 3.86
1833 1952 0.668706 CAAGACAGTCTCGGTGCTGG 60.669 60.000 2.72 0.00 37.07 4.85
1834 1953 0.668706 CCAAGACAGTCTCGGTGCTG 60.669 60.000 2.72 0.00 38.58 4.41
1835 1954 1.115930 ACCAAGACAGTCTCGGTGCT 61.116 55.000 12.80 0.00 0.00 4.40
1842 1982 5.234466 AGCTAATCAAACCAAGACAGTCT 57.766 39.130 0.00 0.00 0.00 3.24
1843 1983 5.239525 ACAAGCTAATCAAACCAAGACAGTC 59.760 40.000 0.00 0.00 0.00 3.51
1846 1986 6.770785 AGTAACAAGCTAATCAAACCAAGACA 59.229 34.615 0.00 0.00 0.00 3.41
1848 1988 7.224297 AGAGTAACAAGCTAATCAAACCAAGA 58.776 34.615 0.00 0.00 0.00 3.02
1864 2004 2.928801 TGCTGCAAGGAGAGTAACAA 57.071 45.000 0.00 0.00 0.00 2.83
1879 2019 0.877071 CAACAACCAGTAGGCTGCTG 59.123 55.000 23.74 23.74 41.26 4.41
1880 2020 0.250901 CCAACAACCAGTAGGCTGCT 60.251 55.000 0.00 0.00 41.26 4.24
1884 2024 1.523758 CAGTCCAACAACCAGTAGGC 58.476 55.000 0.00 0.00 39.06 3.93
1888 2028 0.255890 ACAGCAGTCCAACAACCAGT 59.744 50.000 0.00 0.00 0.00 4.00
1895 2035 8.081025 GGTAGTAGTATATAACAGCAGTCCAAC 58.919 40.741 0.00 0.00 0.00 3.77
1898 2038 7.884354 AGAGGTAGTAGTATATAACAGCAGTCC 59.116 40.741 0.00 0.00 0.00 3.85
1902 2042 9.499479 GTACAGAGGTAGTAGTATATAACAGCA 57.501 37.037 0.00 0.00 0.00 4.41
1911 2051 8.605325 ACATTTTGGTACAGAGGTAGTAGTAT 57.395 34.615 0.00 0.00 42.39 2.12
1915 2055 8.526147 GTCTTACATTTTGGTACAGAGGTAGTA 58.474 37.037 0.00 0.00 42.39 1.82
1916 2056 7.384477 GTCTTACATTTTGGTACAGAGGTAGT 58.616 38.462 0.00 0.00 42.39 2.73
1917 2057 6.530534 CGTCTTACATTTTGGTACAGAGGTAG 59.469 42.308 0.00 0.00 42.39 3.18
1918 2058 6.015180 ACGTCTTACATTTTGGTACAGAGGTA 60.015 38.462 0.00 0.00 42.39 3.08
1919 2059 5.221581 ACGTCTTACATTTTGGTACAGAGGT 60.222 40.000 0.00 0.00 42.39 3.85
1920 2060 5.235516 ACGTCTTACATTTTGGTACAGAGG 58.764 41.667 0.00 0.00 42.39 3.69
1921 2061 6.780706 AACGTCTTACATTTTGGTACAGAG 57.219 37.500 0.00 0.00 42.39 3.35
1922 2062 7.556733 AAAACGTCTTACATTTTGGTACAGA 57.443 32.000 0.00 0.00 42.39 3.41
1923 2063 7.305763 GCAAAAACGTCTTACATTTTGGTACAG 60.306 37.037 17.78 0.00 42.39 2.74
1924 2064 6.472808 GCAAAAACGTCTTACATTTTGGTACA 59.527 34.615 17.78 0.00 41.02 2.90
1925 2065 6.472808 TGCAAAAACGTCTTACATTTTGGTAC 59.527 34.615 17.78 6.55 41.02 3.34
1926 2066 6.561614 TGCAAAAACGTCTTACATTTTGGTA 58.438 32.000 17.78 0.00 41.02 3.25
1927 2067 5.411781 TGCAAAAACGTCTTACATTTTGGT 58.588 33.333 17.78 0.00 41.02 3.67
1928 2068 5.518487 ACTGCAAAAACGTCTTACATTTTGG 59.482 36.000 17.78 8.43 41.02 3.28
1929 2069 6.567769 ACTGCAAAAACGTCTTACATTTTG 57.432 33.333 13.82 13.82 42.66 2.44
1930 2070 6.809196 TGAACTGCAAAAACGTCTTACATTTT 59.191 30.769 0.00 0.00 0.00 1.82
1931 2071 6.326375 TGAACTGCAAAAACGTCTTACATTT 58.674 32.000 0.00 0.00 0.00 2.32
1932 2072 5.885881 TGAACTGCAAAAACGTCTTACATT 58.114 33.333 0.00 0.00 0.00 2.71
1933 2073 5.493133 TGAACTGCAAAAACGTCTTACAT 57.507 34.783 0.00 0.00 0.00 2.29
1934 2074 4.948608 TGAACTGCAAAAACGTCTTACA 57.051 36.364 0.00 0.00 0.00 2.41
1935 2075 6.806120 AATTGAACTGCAAAAACGTCTTAC 57.194 33.333 0.00 0.00 40.48 2.34
1936 2076 7.030165 TCAAATTGAACTGCAAAAACGTCTTA 58.970 30.769 0.00 0.00 40.48 2.10
1937 2077 5.866633 TCAAATTGAACTGCAAAAACGTCTT 59.133 32.000 0.00 0.00 40.48 3.01
1938 2078 5.406649 TCAAATTGAACTGCAAAAACGTCT 58.593 33.333 0.00 0.00 40.48 4.18
1939 2079 5.694674 TCAAATTGAACTGCAAAAACGTC 57.305 34.783 0.00 0.00 40.48 4.34
1951 2091 4.032786 ACGCTTTTGCAGTTCAAATTGAAC 59.967 37.500 26.31 26.31 46.72 3.18
1965 2105 2.348779 CCAAAATGCAAGACGCTTTTGC 60.349 45.455 13.12 10.98 44.68 3.68
1966 2106 2.865551 ACCAAAATGCAAGACGCTTTTG 59.134 40.909 12.05 12.05 44.68 2.44
1967 2107 3.177997 ACCAAAATGCAAGACGCTTTT 57.822 38.095 0.00 0.00 46.70 2.27
1968 2108 2.888834 ACCAAAATGCAAGACGCTTT 57.111 40.000 0.00 0.00 43.06 3.51
1969 2109 3.146066 TCTACCAAAATGCAAGACGCTT 58.854 40.909 0.00 0.00 43.06 4.68
1970 2110 2.744202 CTCTACCAAAATGCAAGACGCT 59.256 45.455 0.00 0.00 43.06 5.07
1971 2111 2.742053 TCTCTACCAAAATGCAAGACGC 59.258 45.455 0.00 0.00 42.89 5.19
1972 2112 3.997021 ACTCTCTACCAAAATGCAAGACG 59.003 43.478 0.00 0.00 0.00 4.18
1973 2113 6.166982 AGTACTCTCTACCAAAATGCAAGAC 58.833 40.000 0.00 0.00 0.00 3.01
1974 2114 6.360370 AGTACTCTCTACCAAAATGCAAGA 57.640 37.500 0.00 0.00 0.00 3.02
1975 2115 7.324178 ACTAGTACTCTCTACCAAAATGCAAG 58.676 38.462 0.00 0.00 0.00 4.01
1976 2116 7.241042 ACTAGTACTCTCTACCAAAATGCAA 57.759 36.000 0.00 0.00 0.00 4.08
1977 2117 6.852420 ACTAGTACTCTCTACCAAAATGCA 57.148 37.500 0.00 0.00 0.00 3.96
1978 2118 9.085250 GTTTACTAGTACTCTCTACCAAAATGC 57.915 37.037 0.91 0.00 0.00 3.56
1983 2123 9.305555 ACAATGTTTACTAGTACTCTCTACCAA 57.694 33.333 0.91 0.00 0.00 3.67
1984 2124 8.737175 CACAATGTTTACTAGTACTCTCTACCA 58.263 37.037 0.91 0.00 0.00 3.25
1985 2125 8.954350 TCACAATGTTTACTAGTACTCTCTACC 58.046 37.037 0.91 0.00 0.00 3.18
1992 2132 9.862371 CAGAGATTCACAATGTTTACTAGTACT 57.138 33.333 0.91 0.00 0.00 2.73
1993 2133 9.856488 TCAGAGATTCACAATGTTTACTAGTAC 57.144 33.333 0.91 0.00 0.00 2.73
2188 2328 1.344065 TTGGCAGAGTACCTCGGAAA 58.656 50.000 0.00 0.00 35.36 3.13
2213 2353 2.054232 TTGTCCCAGCCGTTTTGTTA 57.946 45.000 0.00 0.00 0.00 2.41
2231 2371 2.094904 GGAACGCACGCCACATATT 58.905 52.632 0.00 0.00 0.00 1.28
2232 2372 3.808036 GGAACGCACGCCACATAT 58.192 55.556 0.00 0.00 0.00 1.78
2394 2537 2.258013 CCTGCCGAGGCGAAAACAA 61.258 57.895 9.78 0.00 45.51 2.83
2395 2538 2.668212 CCTGCCGAGGCGAAAACA 60.668 61.111 9.78 0.00 45.51 2.83
2592 2735 9.436957 ACAAGTAACATTACAGTCCAGAAATAG 57.563 33.333 4.67 0.00 36.12 1.73
2618 2761 0.106268 TCAGCTGAAAAGGGGTGCAA 60.106 50.000 15.67 0.00 0.00 4.08
2741 2887 2.176926 ACACACATGCACGCACGAA 61.177 52.632 0.00 0.00 0.00 3.85
2748 2894 3.825308 CTTGGATTACACACACATGCAC 58.175 45.455 0.00 0.00 0.00 4.57
2765 2919 5.123502 GCAGATCTGGAATATACATGCTTGG 59.876 44.000 23.89 0.00 0.00 3.61
2849 3003 4.118410 CCACTTCAGAATCTTCCTCATCG 58.882 47.826 0.00 0.00 0.00 3.84
2870 3024 4.070716 CCTCAGTTTCCATAGCATCATCC 58.929 47.826 0.00 0.00 0.00 3.51
2888 3042 1.203300 TCATCAGTCCCCTTGTCCTCA 60.203 52.381 0.00 0.00 0.00 3.86
2911 3065 1.871676 CATCGTCGACCTCGGAATCTA 59.128 52.381 10.58 0.00 40.29 1.98
2939 3093 2.635427 GTCAGTCCCCTTTCTCTCTGTT 59.365 50.000 0.00 0.00 0.00 3.16
3031 3186 1.641140 CAAACGCAGCGTGTCTCAA 59.359 52.632 23.78 0.00 39.99 3.02
3032 3187 2.881266 GCAAACGCAGCGTGTCTCA 61.881 57.895 23.78 0.00 39.99 3.27
3033 3188 2.127609 GCAAACGCAGCGTGTCTC 60.128 61.111 23.78 6.15 39.99 3.36
3034 3189 1.785041 ATTGCAAACGCAGCGTGTCT 61.785 50.000 23.78 2.17 39.99 3.41
3035 3190 0.934436 AATTGCAAACGCAGCGTGTC 60.934 50.000 23.78 13.89 39.99 3.67
3037 3192 0.661187 AGAATTGCAAACGCAGCGTG 60.661 50.000 23.78 11.47 39.99 5.34
3038 3193 0.661187 CAGAATTGCAAACGCAGCGT 60.661 50.000 16.61 16.61 43.97 5.07
3039 3194 0.661187 ACAGAATTGCAAACGCAGCG 60.661 50.000 14.82 14.82 41.34 5.18
3052 3219 6.804677 TGTTTATGACACAGCAAAACAGAAT 58.195 32.000 0.00 0.00 35.69 2.40
3057 3224 5.587289 TCCTTGTTTATGACACAGCAAAAC 58.413 37.500 0.00 0.00 38.18 2.43
3063 3230 7.479980 TCAAAACTTCCTTGTTTATGACACAG 58.520 34.615 0.00 0.00 38.98 3.66
3078 3245 7.118245 GGAATTTTCACCATGATCAAAACTTCC 59.882 37.037 16.70 16.70 0.00 3.46
3101 3269 5.913137 ACAAACAACACAGATTTGAGGAA 57.087 34.783 3.13 0.00 36.91 3.36
3146 3314 2.589720 TGATTAGCTGGAATGGCATGG 58.410 47.619 0.00 0.00 0.00 3.66
3147 3315 6.525578 AATATGATTAGCTGGAATGGCATG 57.474 37.500 0.00 0.00 0.00 4.06
3148 3316 6.154021 GGAAATATGATTAGCTGGAATGGCAT 59.846 38.462 0.00 0.00 0.00 4.40
3203 3371 5.414454 TCTTGTTTGGTGTATGCCATCTAAC 59.586 40.000 0.00 0.00 39.45 2.34
3384 3552 7.584122 AATCTAGTTAGAATTCGACAGGCTA 57.416 36.000 14.65 6.47 35.69 3.93
3411 3579 9.378597 GGTTCTTCGTTAAATACTTGTTCTTTC 57.621 33.333 0.00 0.00 0.00 2.62
3453 3623 6.017109 TGTTATGCTTCAGGAAACAAGAGTTC 60.017 38.462 0.00 0.00 36.84 3.01
3454 3624 5.827797 TGTTATGCTTCAGGAAACAAGAGTT 59.172 36.000 0.00 0.00 40.40 3.01
3459 3629 5.278463 GCTCTTGTTATGCTTCAGGAAACAA 60.278 40.000 0.00 0.00 37.62 2.83
3471 3641 4.730035 GCTGAAGATGTGCTCTTGTTATGC 60.730 45.833 0.00 0.00 44.42 3.14
3505 3675 2.484594 GGAGAGGAGGCTGAGTTTATGC 60.485 54.545 0.00 0.00 0.00 3.14
3508 3678 2.180276 GTGGAGAGGAGGCTGAGTTTA 58.820 52.381 0.00 0.00 0.00 2.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.