Multiple sequence alignment - TraesCS5D01G013300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G013300 chr5D 100.000 6873 0 0 1 6873 7416304 7409432 0.000000e+00 12693.0
1 TraesCS5D01G013300 chr5D 85.381 643 65 16 6022 6640 55533915 55534552 2.090000e-179 640.0
2 TraesCS5D01G013300 chr5D 83.333 240 35 4 5090 5328 7718391 7718156 4.170000e-52 217.0
3 TraesCS5D01G013300 chr5D 82.143 168 17 6 4361 4528 7571282 7571128 1.560000e-26 132.0
4 TraesCS5D01G013300 chr5D 84.733 131 12 6 4103 4233 7571455 7571333 2.600000e-24 124.0
5 TraesCS5D01G013300 chr5D 86.170 94 10 3 5493 5585 7724597 7724688 1.580000e-16 99.0
6 TraesCS5D01G013300 chr5D 86.170 94 10 3 5493 5585 7727382 7727473 1.580000e-16 99.0
7 TraesCS5D01G013300 chr5D 86.170 94 10 3 5493 5585 7730361 7730452 1.580000e-16 99.0
8 TraesCS5D01G013300 chr5D 85.106 94 11 3 5493 5585 7734994 7735085 7.340000e-15 93.5
9 TraesCS5D01G013300 chr5D 92.982 57 2 2 3456 3512 7571853 7571799 1.590000e-11 82.4
10 TraesCS5D01G013300 chr5D 97.500 40 1 0 5025 5064 7718430 7718391 1.240000e-07 69.4
11 TraesCS5D01G013300 chr5D 96.970 33 1 0 2398 2430 7718711 7718743 1.000000e-03 56.5
12 TraesCS5D01G013300 chr5A 96.709 3039 84 9 2917 5949 4850857 4847829 0.000000e+00 5044.0
13 TraesCS5D01G013300 chr5A 91.740 2954 109 54 5 2899 4853718 4850841 0.000000e+00 3978.0
14 TraesCS5D01G013300 chr5A 85.751 393 47 6 6027 6415 626379147 626379534 2.310000e-109 407.0
15 TraesCS5D01G013300 chr5A 86.644 292 25 6 5662 5946 4975651 4975935 1.860000e-80 311.0
16 TraesCS5D01G013300 chr5A 98.077 52 0 1 5826 5877 4668716 4668666 9.490000e-14 89.8
17 TraesCS5D01G013300 chr5B 95.184 2720 116 13 2917 5628 7544143 7541431 0.000000e+00 4283.0
18 TraesCS5D01G013300 chr5B 92.351 1242 51 18 1680 2899 7545346 7544127 0.000000e+00 1727.0
19 TraesCS5D01G013300 chr5B 82.322 1318 56 54 402 1633 7546570 7545344 0.000000e+00 979.0
20 TraesCS5D01G013300 chr5B 90.537 391 15 10 1 369 7546954 7546564 1.330000e-136 497.0
21 TraesCS5D01G013300 chr5B 88.122 362 20 11 5678 6017 7541076 7540716 6.420000e-110 409.0
22 TraesCS5D01G013300 chr5B 81.793 368 49 12 2425 2788 7934295 7934648 6.740000e-75 292.0
23 TraesCS5D01G013300 chr5B 85.586 222 24 7 2598 2816 7969492 7969708 6.940000e-55 226.0
24 TraesCS5D01G013300 chr5B 87.681 138 14 2 3129 3266 7969869 7970003 2.570000e-34 158.0
25 TraesCS5D01G013300 chr5B 95.455 44 2 0 6644 6687 7539884 7539841 3.440000e-08 71.3
26 TraesCS5D01G013300 chr2D 85.981 642 60 12 6022 6640 307837275 307836641 0.000000e+00 660.0
27 TraesCS5D01G013300 chr2D 90.047 211 11 8 6439 6643 307830964 307830758 1.470000e-66 265.0
28 TraesCS5D01G013300 chr7B 85.514 642 61 14 6022 6640 194759457 194758825 5.810000e-180 641.0
29 TraesCS5D01G013300 chr7B 83.871 620 59 23 6023 6638 221838796 221839378 2.800000e-153 553.0
30 TraesCS5D01G013300 chr7B 82.780 633 81 18 6022 6640 221874019 221874637 2.180000e-149 540.0
31 TraesCS5D01G013300 chr7B 90.594 202 15 3 6443 6640 300838927 300838726 1.470000e-66 265.0
32 TraesCS5D01G013300 chr3D 83.107 663 63 24 6022 6640 320438552 320437895 6.020000e-155 558.0
33 TraesCS5D01G013300 chr3D 90.777 206 13 4 6439 6640 320433738 320433535 3.160000e-68 270.0
34 TraesCS5D01G013300 chr7D 82.462 650 58 25 6022 6640 72394207 72394831 1.020000e-142 518.0
35 TraesCS5D01G013300 chr7D 93.000 200 10 2 6445 6640 335389354 335389155 8.720000e-74 289.0
36 TraesCS5D01G013300 chr7D 90.777 206 14 3 6439 6640 72433012 72433216 3.160000e-68 270.0
37 TraesCS5D01G013300 chr7D 90.291 206 12 5 6439 6640 53443138 53442937 5.290000e-66 263.0
38 TraesCS5D01G013300 chr6A 89.535 344 29 4 6071 6412 18842406 18842744 4.930000e-116 429.0
39 TraesCS5D01G013300 chr1A 84.712 399 50 7 6022 6414 108107747 108107354 8.360000e-104 388.0
40 TraesCS5D01G013300 chr1A 90.291 206 15 3 6439 6640 108160976 108160772 1.470000e-66 265.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G013300 chr5D 7409432 7416304 6872 True 12693.000000 12693 100.000000 1 6873 1 chr5D.!!$R1 6872
1 TraesCS5D01G013300 chr5D 55533915 55534552 637 False 640.000000 640 85.381000 6022 6640 1 chr5D.!!$F3 618
2 TraesCS5D01G013300 chr5A 4847829 4853718 5889 True 4511.000000 5044 94.224500 5 5949 2 chr5A.!!$R2 5944
3 TraesCS5D01G013300 chr5B 7539841 7546954 7113 True 1327.716667 4283 90.661833 1 6687 6 chr5B.!!$R1 6686
4 TraesCS5D01G013300 chr2D 307836641 307837275 634 True 660.000000 660 85.981000 6022 6640 1 chr2D.!!$R2 618
5 TraesCS5D01G013300 chr7B 194758825 194759457 632 True 641.000000 641 85.514000 6022 6640 1 chr7B.!!$R1 618
6 TraesCS5D01G013300 chr7B 221838796 221839378 582 False 553.000000 553 83.871000 6023 6638 1 chr7B.!!$F1 615
7 TraesCS5D01G013300 chr7B 221874019 221874637 618 False 540.000000 540 82.780000 6022 6640 1 chr7B.!!$F2 618
8 TraesCS5D01G013300 chr3D 320437895 320438552 657 True 558.000000 558 83.107000 6022 6640 1 chr3D.!!$R2 618
9 TraesCS5D01G013300 chr7D 72394207 72394831 624 False 518.000000 518 82.462000 6022 6640 1 chr7D.!!$F1 618

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
383 409 0.032540 GCTGGCACCAAGACCAAAAG 59.967 55.000 0.00 0.0 34.96 2.27 F
384 410 0.032540 CTGGCACCAAGACCAAAAGC 59.967 55.000 0.00 0.0 34.96 3.51 F
392 418 0.390492 AAGACCAAAAGCCAAGCTGC 59.610 50.000 0.00 0.0 39.62 5.25 F
394 420 0.598419 GACCAAAAGCCAAGCTGCAC 60.598 55.000 1.02 0.0 39.62 4.57 F
396 422 0.961019 CCAAAAGCCAAGCTGCACTA 59.039 50.000 1.02 0.0 39.62 2.74 F
397 423 1.068055 CCAAAAGCCAAGCTGCACTAG 60.068 52.381 1.02 0.0 39.62 2.57 F
1066 1198 1.522900 CTCCCTCCCTCTCTCTCTCT 58.477 60.000 0.00 0.0 0.00 3.10 F
2583 2766 1.048601 TCCCACTTCTCGAGCAGTTT 58.951 50.000 15.37 0.0 0.00 2.66 F
2909 3098 0.041090 AGGTTGGATCCCCGCAAAAT 59.959 50.000 9.90 0.0 34.29 1.82 F
4479 4668 0.335361 GGAGACCACAGAGGGGACTA 59.665 60.000 0.00 0.0 44.43 2.59 F
5191 5398 0.035056 AAACCAGCCAGCTAAGCGAT 60.035 50.000 2.49 0.0 34.64 4.58 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1365 1520 0.322546 ATCCAGGAAACCGGAAGCAC 60.323 55.000 9.46 0.00 32.15 4.40 R
1988 2159 1.203100 AGGAAACTCCAAGGCAGCAAT 60.203 47.619 0.00 0.00 39.61 3.56 R
2260 2431 1.459450 AAAACCGCAGCCATACGAAT 58.541 45.000 0.00 0.00 0.00 3.34 R
2488 2670 3.199880 GGTCCATATGTGGTCCTTCAG 57.800 52.381 15.87 0.00 46.46 3.02 R
2504 2686 2.159379 CGAATTTGCAGGCTAAAGGTCC 60.159 50.000 0.00 0.00 0.00 4.46 R
2505 2687 2.732282 GCGAATTTGCAGGCTAAAGGTC 60.732 50.000 13.04 0.00 34.15 3.85 R
2890 3079 0.041090 ATTTTGCGGGGATCCAACCT 59.959 50.000 15.23 0.00 0.00 3.50 R
4663 4868 0.170561 CAGTCTGCCTTGCAAGCATC 59.829 55.000 21.43 15.95 40.04 3.91 R
4832 5038 4.397730 ACAAACAAGTACAGTGTGCAATGA 59.602 37.500 19.05 0.00 0.00 2.57 R
5458 5665 0.243636 CTTGGGCATTTGGAACCGAC 59.756 55.000 0.00 0.00 0.00 4.79 R
6740 7931 0.108041 GCCGATGGAAACTACGGGAA 60.108 55.000 0.00 0.00 44.89 3.97 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
55 56 4.929211 GCAAAATTTAGCCCAAATTCGTCT 59.071 37.500 6.99 0.00 44.37 4.18
63 64 3.941483 AGCCCAAATTCGTCTATGTTCTG 59.059 43.478 0.00 0.00 0.00 3.02
64 65 3.938963 GCCCAAATTCGTCTATGTTCTGA 59.061 43.478 0.00 0.00 0.00 3.27
65 66 4.034510 GCCCAAATTCGTCTATGTTCTGAG 59.965 45.833 0.00 0.00 0.00 3.35
274 299 4.193240 ACCCCACCACTAATTGTTTTCT 57.807 40.909 0.00 0.00 0.00 2.52
362 388 2.060275 TCCTGCCTGCATATCTCCATT 58.940 47.619 0.00 0.00 0.00 3.16
363 389 3.250617 TCCTGCCTGCATATCTCCATTA 58.749 45.455 0.00 0.00 0.00 1.90
364 390 3.262660 TCCTGCCTGCATATCTCCATTAG 59.737 47.826 0.00 0.00 0.00 1.73
365 391 3.008330 CTGCCTGCATATCTCCATTAGC 58.992 50.000 0.00 0.00 0.00 3.09
366 392 2.641321 TGCCTGCATATCTCCATTAGCT 59.359 45.455 0.00 0.00 0.00 3.32
367 393 3.008330 GCCTGCATATCTCCATTAGCTG 58.992 50.000 0.00 0.00 0.00 4.24
369 395 3.008330 CTGCATATCTCCATTAGCTGGC 58.992 50.000 0.00 0.00 45.52 4.85
370 396 2.372837 TGCATATCTCCATTAGCTGGCA 59.627 45.455 0.00 0.00 45.52 4.92
371 397 2.746362 GCATATCTCCATTAGCTGGCAC 59.254 50.000 0.00 0.00 45.52 5.01
372 398 3.341823 CATATCTCCATTAGCTGGCACC 58.658 50.000 0.00 0.00 45.52 5.01
373 399 1.216064 ATCTCCATTAGCTGGCACCA 58.784 50.000 0.00 0.00 45.52 4.17
374 400 0.991146 TCTCCATTAGCTGGCACCAA 59.009 50.000 0.00 0.00 45.52 3.67
375 401 1.065199 TCTCCATTAGCTGGCACCAAG 60.065 52.381 0.00 0.00 45.52 3.61
376 402 0.991146 TCCATTAGCTGGCACCAAGA 59.009 50.000 0.00 0.00 45.52 3.02
377 403 1.098050 CCATTAGCTGGCACCAAGAC 58.902 55.000 0.00 0.00 38.47 3.01
378 404 1.098050 CATTAGCTGGCACCAAGACC 58.902 55.000 0.00 0.00 0.00 3.85
379 405 0.698238 ATTAGCTGGCACCAAGACCA 59.302 50.000 0.00 0.00 0.00 4.02
380 406 0.476338 TTAGCTGGCACCAAGACCAA 59.524 50.000 0.00 0.00 34.96 3.67
381 407 0.476338 TAGCTGGCACCAAGACCAAA 59.524 50.000 0.00 0.00 34.96 3.28
382 408 0.396974 AGCTGGCACCAAGACCAAAA 60.397 50.000 0.00 0.00 34.96 2.44
383 409 0.032540 GCTGGCACCAAGACCAAAAG 59.967 55.000 0.00 0.00 34.96 2.27
384 410 0.032540 CTGGCACCAAGACCAAAAGC 59.967 55.000 0.00 0.00 34.96 3.51
385 411 1.367471 GGCACCAAGACCAAAAGCC 59.633 57.895 0.00 0.00 0.00 4.35
386 412 1.398958 GGCACCAAGACCAAAAGCCA 61.399 55.000 0.00 0.00 40.29 4.75
387 413 0.463620 GCACCAAGACCAAAAGCCAA 59.536 50.000 0.00 0.00 0.00 4.52
388 414 1.538849 GCACCAAGACCAAAAGCCAAG 60.539 52.381 0.00 0.00 0.00 3.61
389 415 0.752658 ACCAAGACCAAAAGCCAAGC 59.247 50.000 0.00 0.00 0.00 4.01
390 416 1.043022 CCAAGACCAAAAGCCAAGCT 58.957 50.000 0.00 0.00 42.56 3.74
391 417 1.269936 CCAAGACCAAAAGCCAAGCTG 60.270 52.381 0.00 0.00 39.62 4.24
392 418 0.390492 AAGACCAAAAGCCAAGCTGC 59.610 50.000 0.00 0.00 39.62 5.25
393 419 0.756442 AGACCAAAAGCCAAGCTGCA 60.756 50.000 1.02 0.00 39.62 4.41
394 420 0.598419 GACCAAAAGCCAAGCTGCAC 60.598 55.000 1.02 0.00 39.62 4.57
395 421 1.044790 ACCAAAAGCCAAGCTGCACT 61.045 50.000 1.02 0.00 39.62 4.40
396 422 0.961019 CCAAAAGCCAAGCTGCACTA 59.039 50.000 1.02 0.00 39.62 2.74
397 423 1.068055 CCAAAAGCCAAGCTGCACTAG 60.068 52.381 1.02 0.00 39.62 2.57
440 501 4.256920 TCAGCTGCAGGATAAAAACTCTC 58.743 43.478 17.12 0.00 0.00 3.20
481 543 6.757897 TCTGAAAGAAAAACAGCTCTGAAA 57.242 33.333 3.60 0.00 42.31 2.69
484 546 7.917505 TCTGAAAGAAAAACAGCTCTGAAATTC 59.082 33.333 3.60 4.94 42.31 2.17
495 557 5.345202 CAGCTCTGAAATTCATTTGCTTGTC 59.655 40.000 12.37 0.00 28.77 3.18
506 568 5.718146 TCATTTGCTTGTCTGTGTTTTTCA 58.282 33.333 0.00 0.00 0.00 2.69
510 572 9.409312 CATTTGCTTGTCTGTGTTTTTCATATA 57.591 29.630 0.00 0.00 0.00 0.86
530 592 2.816204 TGTGTGGAAATTGTGGCATG 57.184 45.000 0.00 0.00 0.00 4.06
698 783 7.872881 AGTAGACATACATACTCCAACATACG 58.127 38.462 0.00 0.00 34.07 3.06
737 822 6.542370 CCCAGTCCACACCAACTAATAATAAG 59.458 42.308 0.00 0.00 0.00 1.73
954 1086 1.734655 TTCTCCCTTTGAGCTCTGGT 58.265 50.000 16.19 0.00 41.18 4.00
995 1127 1.680338 GGGATCTGATTTTGTCCCCG 58.320 55.000 2.40 0.00 43.71 5.73
1045 1177 2.041405 CCCTCCTCTCACCCCTCC 60.041 72.222 0.00 0.00 0.00 4.30
1050 1182 2.041405 CTCTCACCCCTCCCCTCC 60.041 72.222 0.00 0.00 0.00 4.30
1052 1184 3.700350 CTCACCCCTCCCCTCCCT 61.700 72.222 0.00 0.00 0.00 4.20
1053 1185 3.695825 TCACCCCTCCCCTCCCTC 61.696 72.222 0.00 0.00 0.00 4.30
1054 1186 4.825679 CACCCCTCCCCTCCCTCC 62.826 77.778 0.00 0.00 0.00 4.30
1066 1198 1.522900 CTCCCTCCCTCTCTCTCTCT 58.477 60.000 0.00 0.00 0.00 3.10
1091 1223 5.822204 TCTATCTTACTCTCTCCATAGCCC 58.178 45.833 0.00 0.00 0.00 5.19
1181 1325 3.787001 CCTCGCCCCCAGGTCTTC 61.787 72.222 0.00 0.00 34.57 2.87
1182 1326 3.787001 CTCGCCCCCAGGTCTTCC 61.787 72.222 0.00 0.00 34.57 3.46
1185 1329 3.412408 GCCCCCAGGTCTTCCCTC 61.412 72.222 0.00 0.00 43.86 4.30
1186 1330 2.692741 CCCCCAGGTCTTCCCTCC 60.693 72.222 0.00 0.00 43.86 4.30
1187 1331 2.692741 CCCCAGGTCTTCCCTCCC 60.693 72.222 0.00 0.00 43.86 4.30
1188 1332 2.692741 CCCAGGTCTTCCCTCCCC 60.693 72.222 0.00 0.00 43.86 4.81
1189 1333 2.456840 CCAGGTCTTCCCTCCCCT 59.543 66.667 0.00 0.00 43.86 4.79
1195 1339 1.866997 TCTTCCCTCCCCTCCCTCA 60.867 63.158 0.00 0.00 0.00 3.86
1220 1364 5.509498 TCCCTTCCATTTTCTTATGACCTG 58.491 41.667 0.00 0.00 0.00 4.00
1221 1365 4.646492 CCCTTCCATTTTCTTATGACCTGG 59.354 45.833 0.00 0.00 0.00 4.45
1225 1374 3.382546 CCATTTTCTTATGACCTGGCCTG 59.617 47.826 3.32 2.54 0.00 4.85
1358 1513 3.188460 GGTTTCGCTGAATTGTGCTCTTA 59.812 43.478 0.00 0.00 0.00 2.10
1365 1520 4.728882 GCTGAATTGTGCTCTTATTGTCCG 60.729 45.833 0.00 0.00 0.00 4.79
1461 1620 2.914908 GCGGATTTTGCACGGGTGT 61.915 57.895 0.25 0.00 0.00 4.16
1530 1691 4.471025 CAGGAGAAAAATATGGCCCCTTTT 59.529 41.667 0.00 0.31 0.00 2.27
1575 1740 1.593296 CTCCTGCCTTTCTTGCTGCC 61.593 60.000 0.00 0.00 0.00 4.85
1609 1774 6.758886 TCTTCTCTTCTTGAGTTCAGTGTTTC 59.241 38.462 0.00 0.00 43.13 2.78
1704 1871 2.031769 CAGCAGCATGTTCGTTTCTTGA 60.032 45.455 0.00 0.00 39.31 3.02
1738 1905 3.648545 AGCTTATTATCTGTGGAGGGGAC 59.351 47.826 0.00 0.00 0.00 4.46
1773 1940 6.292865 GCTGGCCAAATTGTAAAAGTCTTTTC 60.293 38.462 13.83 7.09 34.19 2.29
1806 1974 5.393896 CCTTGATTTCCTCCTTTCATCAAGC 60.394 44.000 12.69 0.00 45.02 4.01
1859 2027 3.069443 CCCTTGCCTTTTTGAAGCTGTTA 59.931 43.478 0.00 0.00 0.00 2.41
1967 2135 6.601613 TGGTGGTTACTTTAGCTTTATCATGG 59.398 38.462 0.00 0.00 0.00 3.66
1988 2159 3.744426 GGAGTAGCTTGTAAACTGCGAAA 59.256 43.478 0.00 0.00 0.00 3.46
2089 2260 2.983229 CAACTATGCTGAGCAGGTTCT 58.017 47.619 20.23 4.41 43.65 3.01
2120 2291 1.938577 CAGATTGATCAGGAAGCCACG 59.061 52.381 0.00 0.00 0.00 4.94
2271 2442 6.751888 GCAATTTTCTGTTTATTCGTATGGCT 59.248 34.615 0.00 0.00 0.00 4.75
2323 2494 7.128331 CGTTGTCCATATGATTCTTGAATGAC 58.872 38.462 3.65 0.00 0.00 3.06
2485 2667 8.092687 CCAAAACTTTCTTGATCCAATCTGAAT 58.907 33.333 0.00 0.00 0.00 2.57
2488 2670 7.388460 ACTTTCTTGATCCAATCTGAATGTC 57.612 36.000 0.00 0.00 32.04 3.06
2500 2682 2.972021 TCTGAATGTCTGAAGGACCACA 59.028 45.455 0.00 0.00 43.89 4.17
2502 2684 4.777366 TCTGAATGTCTGAAGGACCACATA 59.223 41.667 0.00 0.00 43.89 2.29
2504 2686 5.430886 TGAATGTCTGAAGGACCACATATG 58.569 41.667 0.00 0.00 43.89 1.78
2580 2763 2.393271 AAATCCCACTTCTCGAGCAG 57.607 50.000 10.72 10.72 0.00 4.24
2581 2764 1.270907 AATCCCACTTCTCGAGCAGT 58.729 50.000 12.20 12.20 0.00 4.40
2582 2765 1.270907 ATCCCACTTCTCGAGCAGTT 58.729 50.000 15.37 0.00 0.00 3.16
2583 2766 1.048601 TCCCACTTCTCGAGCAGTTT 58.951 50.000 15.37 0.00 0.00 2.66
2755 2939 5.172934 ACTTTTCACGTTCAGAGTGTTGTA 58.827 37.500 0.00 0.00 40.28 2.41
2832 3016 8.621532 ACATCAGTAAAAAGAATACTTGCTCA 57.378 30.769 0.00 0.00 36.39 4.26
2833 3017 8.725148 ACATCAGTAAAAAGAATACTTGCTCAG 58.275 33.333 0.00 0.00 36.39 3.35
2881 3070 3.765381 TCAGCCCATTTCATTTCTGTCA 58.235 40.909 0.00 0.00 0.00 3.58
2882 3071 4.151121 TCAGCCCATTTCATTTCTGTCAA 58.849 39.130 0.00 0.00 0.00 3.18
2883 3072 4.773674 TCAGCCCATTTCATTTCTGTCAAT 59.226 37.500 0.00 0.00 0.00 2.57
2884 3073 5.246656 TCAGCCCATTTCATTTCTGTCAATT 59.753 36.000 0.00 0.00 0.00 2.32
2885 3074 5.350365 CAGCCCATTTCATTTCTGTCAATTG 59.650 40.000 0.00 0.00 0.00 2.32
2886 3075 4.093850 GCCCATTTCATTTCTGTCAATTGC 59.906 41.667 0.00 0.00 0.00 3.56
2887 3076 5.239351 CCCATTTCATTTCTGTCAATTGCA 58.761 37.500 0.00 1.49 0.00 4.08
2888 3077 5.350365 CCCATTTCATTTCTGTCAATTGCAG 59.650 40.000 18.26 18.26 35.43 4.41
2889 3078 5.350365 CCATTTCATTTCTGTCAATTGCAGG 59.650 40.000 21.74 11.24 34.89 4.85
2890 3079 5.787953 TTTCATTTCTGTCAATTGCAGGA 57.212 34.783 21.74 14.99 34.89 3.86
2891 3080 5.381174 TTCATTTCTGTCAATTGCAGGAG 57.619 39.130 21.74 13.21 34.89 3.69
2892 3081 3.760151 TCATTTCTGTCAATTGCAGGAGG 59.240 43.478 21.74 15.32 34.89 4.30
2893 3082 2.957402 TTCTGTCAATTGCAGGAGGT 57.043 45.000 21.74 0.00 34.89 3.85
2894 3083 2.957402 TCTGTCAATTGCAGGAGGTT 57.043 45.000 21.74 0.00 34.89 3.50
2895 3084 2.507484 TCTGTCAATTGCAGGAGGTTG 58.493 47.619 21.74 4.35 34.89 3.77
2896 3085 1.542915 CTGTCAATTGCAGGAGGTTGG 59.457 52.381 17.17 0.00 0.00 3.77
2897 3086 1.144708 TGTCAATTGCAGGAGGTTGGA 59.855 47.619 0.00 0.00 0.00 3.53
2898 3087 2.225091 TGTCAATTGCAGGAGGTTGGAT 60.225 45.455 0.00 0.00 0.00 3.41
2899 3088 2.424956 GTCAATTGCAGGAGGTTGGATC 59.575 50.000 0.00 0.00 0.00 3.36
2900 3089 1.753073 CAATTGCAGGAGGTTGGATCC 59.247 52.381 4.20 4.20 37.07 3.36
2901 3090 0.259938 ATTGCAGGAGGTTGGATCCC 59.740 55.000 9.90 0.00 37.57 3.85
2902 3091 1.863155 TTGCAGGAGGTTGGATCCCC 61.863 60.000 9.90 3.82 37.57 4.81
2903 3092 2.911143 CAGGAGGTTGGATCCCCG 59.089 66.667 9.90 0.00 37.57 5.73
2904 3093 3.090532 AGGAGGTTGGATCCCCGC 61.091 66.667 9.90 5.73 37.57 6.13
2905 3094 3.407967 GGAGGTTGGATCCCCGCA 61.408 66.667 9.90 0.00 34.29 5.69
2906 3095 2.674754 GAGGTTGGATCCCCGCAA 59.325 61.111 9.90 0.00 34.29 4.85
2907 3096 1.001393 GAGGTTGGATCCCCGCAAA 60.001 57.895 9.90 0.00 34.29 3.68
2908 3097 0.610785 GAGGTTGGATCCCCGCAAAA 60.611 55.000 9.90 0.00 34.29 2.44
2909 3098 0.041090 AGGTTGGATCCCCGCAAAAT 59.959 50.000 9.90 0.00 34.29 1.82
2910 3099 1.286553 AGGTTGGATCCCCGCAAAATA 59.713 47.619 9.90 0.00 34.29 1.40
2911 3100 2.104170 GGTTGGATCCCCGCAAAATAA 58.896 47.619 9.90 0.00 34.29 1.40
2912 3101 2.498078 GGTTGGATCCCCGCAAAATAAA 59.502 45.455 9.90 0.00 34.29 1.40
2913 3102 3.133901 GGTTGGATCCCCGCAAAATAAAT 59.866 43.478 9.90 0.00 34.29 1.40
2914 3103 4.342665 GGTTGGATCCCCGCAAAATAAATA 59.657 41.667 9.90 0.00 34.29 1.40
2915 3104 5.163395 GGTTGGATCCCCGCAAAATAAATAA 60.163 40.000 9.90 0.00 34.29 1.40
3134 3323 4.437239 ACTTGCTCTATCTGAACAATCCG 58.563 43.478 0.00 0.00 31.33 4.18
3452 3641 1.553704 GATGTTCCGGTAGGTCAAGGT 59.446 52.381 0.00 0.00 39.05 3.50
3554 3743 0.586319 ACATGTTGACGCCAAACTCG 59.414 50.000 0.00 0.00 33.49 4.18
3879 4068 1.075212 TGGCAATGTTGGATGAGGTGA 59.925 47.619 0.00 0.00 0.00 4.02
3892 4081 4.080863 GGATGAGGTGAGTTGGTGACTATT 60.081 45.833 0.00 0.00 39.19 1.73
3924 4113 5.701290 GCTGCTTGTACCTTTCTTTCTTCTA 59.299 40.000 0.00 0.00 0.00 2.10
3954 4143 6.183360 ACAAACAACTCAATGCAGATTTCTGA 60.183 34.615 11.70 0.00 46.59 3.27
4023 4212 3.991605 ACACGTTGATGTTAGCGAATC 57.008 42.857 0.00 0.00 0.00 2.52
4467 4656 0.907486 CTCAGAATGCCTGGAGACCA 59.093 55.000 0.00 0.00 43.12 4.02
4479 4668 0.335361 GGAGACCACAGAGGGGACTA 59.665 60.000 0.00 0.00 44.43 2.59
4545 4734 3.129988 ACTTCCTTCACCCGTAAGTATCG 59.870 47.826 0.00 0.00 0.00 2.92
4581 4786 8.432110 AGTTTAATCCATTTGTTGTTGTTTCC 57.568 30.769 0.00 0.00 0.00 3.13
4663 4868 8.579863 AGGTATCCAAAAGATTCTGAAAAGTTG 58.420 33.333 0.00 0.00 36.33 3.16
4712 4917 7.113658 ACAAGGAGTCAGGTAATACATACTG 57.886 40.000 0.00 0.00 34.74 2.74
4718 4923 7.822822 GGAGTCAGGTAATACATACTGTTGTTT 59.177 37.037 0.00 0.00 34.74 2.83
4842 5048 7.381948 TGTCTTCAAATTTGTATCATTGCACAC 59.618 33.333 17.47 2.07 0.00 3.82
4851 5057 5.304778 TGTATCATTGCACACTGTACTTGT 58.695 37.500 0.00 0.00 0.00 3.16
4862 5068 7.911205 TGCACACTGTACTTGTTTGTATTTTAC 59.089 33.333 0.00 0.00 0.00 2.01
4901 5107 3.317993 GTGTCCAACCACAGCATAAAACT 59.682 43.478 0.00 0.00 35.38 2.66
5056 5263 7.055667 TGAAGACATGTACAAAGAAGAGACT 57.944 36.000 0.00 0.00 0.00 3.24
5173 5380 3.948719 AGGGCTCGGGTTTGCGAA 61.949 61.111 0.00 0.00 0.00 4.70
5191 5398 0.035056 AAACCAGCCAGCTAAGCGAT 60.035 50.000 2.49 0.00 34.64 4.58
5206 5413 1.555741 GCGATTCGAGAGCCAGCATC 61.556 60.000 10.88 0.00 0.00 3.91
5316 5523 2.443952 ATCCGGTGAGGCGGATGA 60.444 61.111 0.00 0.00 42.67 2.92
5407 5614 1.686110 AGAGCTTGGGAGGTACGGG 60.686 63.158 0.00 0.00 32.79 5.28
5551 5758 2.419673 CGGTGTTAGCATTGCATCTTCA 59.580 45.455 11.91 0.16 0.00 3.02
5632 5839 2.933906 GCATGATTTTGTGGCCTGAATG 59.066 45.455 3.32 0.00 0.00 2.67
5639 5846 3.369242 TTGTGGCCTGAATGATGATGA 57.631 42.857 3.32 0.00 0.00 2.92
5643 5850 3.434641 GTGGCCTGAATGATGATGATACG 59.565 47.826 3.32 0.00 0.00 3.06
5965 6519 4.146745 TGATGCATATCTTGTGCTCAGT 57.853 40.909 0.00 0.00 42.92 3.41
5966 6520 5.280654 TGATGCATATCTTGTGCTCAGTA 57.719 39.130 0.00 0.00 42.92 2.74
5967 6521 5.861727 TGATGCATATCTTGTGCTCAGTAT 58.138 37.500 0.00 0.00 42.92 2.12
5968 6522 6.293698 TGATGCATATCTTGTGCTCAGTATT 58.706 36.000 0.00 0.00 42.92 1.89
5969 6523 5.996669 TGCATATCTTGTGCTCAGTATTG 57.003 39.130 0.00 0.00 42.92 1.90
5970 6524 5.430886 TGCATATCTTGTGCTCAGTATTGT 58.569 37.500 0.00 0.00 42.92 2.71
5971 6525 6.581712 TGCATATCTTGTGCTCAGTATTGTA 58.418 36.000 0.00 0.00 42.92 2.41
5972 6526 7.047271 TGCATATCTTGTGCTCAGTATTGTAA 58.953 34.615 0.00 0.00 42.92 2.41
5973 6527 7.552330 TGCATATCTTGTGCTCAGTATTGTAAA 59.448 33.333 0.00 0.00 42.92 2.01
5974 6528 8.066595 GCATATCTTGTGCTCAGTATTGTAAAG 58.933 37.037 0.00 0.00 39.45 1.85
5975 6529 9.102757 CATATCTTGTGCTCAGTATTGTAAAGT 57.897 33.333 0.00 0.00 0.00 2.66
5978 6532 9.672673 ATCTTGTGCTCAGTATTGTAAAGTATT 57.327 29.630 0.00 0.00 0.00 1.89
5979 6533 8.935844 TCTTGTGCTCAGTATTGTAAAGTATTG 58.064 33.333 0.00 0.00 0.00 1.90
5980 6534 7.609760 TGTGCTCAGTATTGTAAAGTATTGG 57.390 36.000 0.00 0.00 0.00 3.16
5981 6535 6.093495 TGTGCTCAGTATTGTAAAGTATTGGC 59.907 38.462 0.00 0.00 0.00 4.52
5982 6536 5.588648 TGCTCAGTATTGTAAAGTATTGGCC 59.411 40.000 0.00 0.00 0.00 5.36
5983 6537 5.588648 GCTCAGTATTGTAAAGTATTGGCCA 59.411 40.000 0.00 0.00 0.00 5.36
5984 6538 6.238484 GCTCAGTATTGTAAAGTATTGGCCAG 60.238 42.308 5.11 0.00 0.00 4.85
6017 6571 4.095782 GTCCAAATACTGCGCTTTTCCATA 59.904 41.667 9.73 0.00 0.00 2.74
6019 6573 4.096382 CCAAATACTGCGCTTTTCCATACT 59.904 41.667 9.73 0.00 0.00 2.12
6020 6574 4.882671 AATACTGCGCTTTTCCATACTG 57.117 40.909 9.73 0.00 0.00 2.74
6063 6619 1.781025 CGTTGCGCTTCCCAGAAACA 61.781 55.000 9.73 0.00 0.00 2.83
6084 6640 1.867363 AATTCGCCCTCTCCTGTACT 58.133 50.000 0.00 0.00 0.00 2.73
6160 6717 2.502492 CGCTCGGGATGGAGTGGAT 61.502 63.158 0.00 0.00 40.12 3.41
6165 6722 2.899900 CTCGGGATGGAGTGGATTATGA 59.100 50.000 0.00 0.00 0.00 2.15
6173 6730 0.473755 AGTGGATTATGATGGCGGCA 59.526 50.000 16.34 16.34 0.00 5.69
6174 6731 1.133823 AGTGGATTATGATGGCGGCAA 60.134 47.619 18.31 0.00 0.00 4.52
6273 6832 2.890311 TGGAAAACCCTAACATGTGCAG 59.110 45.455 0.00 0.00 35.38 4.41
6341 6900 0.672342 AACCGACTAAGCTGTGACGT 59.328 50.000 0.00 0.00 0.00 4.34
6358 6917 3.971858 GTGTCCGTCACGACTCTAG 57.028 57.895 0.00 0.00 37.31 2.43
6359 6918 0.179194 GTGTCCGTCACGACTCTAGC 60.179 60.000 0.00 0.00 37.31 3.42
6366 6925 1.131504 GTCACGACTCTAGCCAGACTG 59.868 57.143 0.00 0.00 0.00 3.51
6455 7074 3.444805 GAGCGAGGAGGAGTGCGT 61.445 66.667 0.00 0.00 0.00 5.24
6511 7130 5.935789 GTGCTACAACACTCCACCTTATAAA 59.064 40.000 0.00 0.00 37.58 1.40
6523 7145 4.142902 CCACCTTATAAAGTGTGCAACTCG 60.143 45.833 12.19 0.00 38.56 4.18
6528 7150 1.299541 AAAGTGTGCAACTCGTCCAG 58.700 50.000 0.00 0.00 38.56 3.86
6593 7358 2.564062 ACACATGGGCCTTTGAGATTTG 59.436 45.455 4.53 0.00 0.00 2.32
6641 7406 7.972301 CCATAAATGGGCCCAATATTCTAAAA 58.028 34.615 32.58 9.24 44.31 1.52
6642 7407 8.096414 CCATAAATGGGCCCAATATTCTAAAAG 58.904 37.037 32.58 15.08 44.31 2.27
6649 7840 4.515567 GCCCAATATTCTAAAAGACCTCGG 59.484 45.833 0.00 0.00 0.00 4.63
6657 7848 0.690762 AAAAGACCTCGGCTAGCCAA 59.309 50.000 32.47 15.37 35.37 4.52
6687 7878 3.955471 TGGTGAGGATCTTGCCTTTTAG 58.045 45.455 0.00 0.00 38.73 1.85
6688 7879 3.282885 GGTGAGGATCTTGCCTTTTAGG 58.717 50.000 0.00 0.00 38.73 2.69
6689 7880 3.054361 GGTGAGGATCTTGCCTTTTAGGA 60.054 47.826 0.00 0.00 38.73 2.94
6690 7881 4.567747 GGTGAGGATCTTGCCTTTTAGGAA 60.568 45.833 0.00 0.00 38.73 3.36
6691 7882 4.396478 GTGAGGATCTTGCCTTTTAGGAAC 59.604 45.833 0.00 0.00 38.73 3.62
6692 7883 4.042809 TGAGGATCTTGCCTTTTAGGAACA 59.957 41.667 0.00 0.00 38.73 3.18
6693 7884 4.593956 AGGATCTTGCCTTTTAGGAACAG 58.406 43.478 0.00 0.00 37.67 3.16
6694 7885 3.129462 GGATCTTGCCTTTTAGGAACAGC 59.871 47.826 0.00 0.00 37.67 4.40
6695 7886 2.514803 TCTTGCCTTTTAGGAACAGCC 58.485 47.619 0.00 0.00 37.67 4.85
6696 7887 2.158534 TCTTGCCTTTTAGGAACAGCCA 60.159 45.455 0.00 0.00 37.67 4.75
6697 7888 1.909700 TGCCTTTTAGGAACAGCCAG 58.090 50.000 0.00 0.00 37.67 4.85
6698 7889 1.423541 TGCCTTTTAGGAACAGCCAGA 59.576 47.619 0.00 0.00 37.67 3.86
6699 7890 2.158534 TGCCTTTTAGGAACAGCCAGAA 60.159 45.455 0.00 0.00 37.67 3.02
6700 7891 2.489722 GCCTTTTAGGAACAGCCAGAAG 59.510 50.000 0.00 0.00 37.67 2.85
6701 7892 3.810743 GCCTTTTAGGAACAGCCAGAAGA 60.811 47.826 0.00 0.00 37.67 2.87
6702 7893 4.398319 CCTTTTAGGAACAGCCAGAAGAA 58.602 43.478 0.00 0.00 37.67 2.52
6703 7894 4.457257 CCTTTTAGGAACAGCCAGAAGAAG 59.543 45.833 0.00 0.00 37.67 2.85
6704 7895 4.974645 TTTAGGAACAGCCAGAAGAAGA 57.025 40.909 0.00 0.00 40.02 2.87
6705 7896 4.974645 TTAGGAACAGCCAGAAGAAGAA 57.025 40.909 0.00 0.00 40.02 2.52
6706 7897 5.505181 TTAGGAACAGCCAGAAGAAGAAT 57.495 39.130 0.00 0.00 40.02 2.40
6707 7898 3.949132 AGGAACAGCCAGAAGAAGAATC 58.051 45.455 0.00 0.00 40.02 2.52
6708 7899 3.586618 AGGAACAGCCAGAAGAAGAATCT 59.413 43.478 0.00 0.00 40.02 2.40
6709 7900 3.688673 GGAACAGCCAGAAGAAGAATCTG 59.311 47.826 0.00 0.00 43.15 2.90
6710 7901 4.322567 GAACAGCCAGAAGAAGAATCTGT 58.677 43.478 3.18 0.00 42.19 3.41
6711 7902 5.482908 GAACAGCCAGAAGAAGAATCTGTA 58.517 41.667 3.18 0.00 42.19 2.74
6712 7903 4.826556 ACAGCCAGAAGAAGAATCTGTAC 58.173 43.478 3.18 0.00 42.19 2.90
6713 7904 4.530161 ACAGCCAGAAGAAGAATCTGTACT 59.470 41.667 0.00 0.00 42.19 2.73
6714 7905 5.012561 ACAGCCAGAAGAAGAATCTGTACTT 59.987 40.000 0.00 0.00 42.19 2.24
6715 7906 5.350914 CAGCCAGAAGAAGAATCTGTACTTG 59.649 44.000 0.00 0.00 42.19 3.16
6716 7907 4.633565 GCCAGAAGAAGAATCTGTACTTGG 59.366 45.833 0.00 1.97 42.19 3.61
6717 7908 4.633565 CCAGAAGAAGAATCTGTACTTGGC 59.366 45.833 0.00 0.00 42.19 4.52
6718 7909 4.633565 CAGAAGAAGAATCTGTACTTGGCC 59.366 45.833 0.00 0.00 39.54 5.36
6719 7910 4.534103 AGAAGAAGAATCTGTACTTGGCCT 59.466 41.667 3.32 0.00 35.59 5.19
6720 7911 4.479786 AGAAGAATCTGTACTTGGCCTC 57.520 45.455 3.32 0.00 33.59 4.70
6721 7912 3.198853 AGAAGAATCTGTACTTGGCCTCC 59.801 47.826 3.32 0.00 33.59 4.30
6722 7913 2.551270 AGAATCTGTACTTGGCCTCCA 58.449 47.619 3.32 0.00 0.00 3.86
6723 7914 2.237392 AGAATCTGTACTTGGCCTCCAC 59.763 50.000 3.32 0.00 30.78 4.02
6724 7915 0.912486 ATCTGTACTTGGCCTCCACC 59.088 55.000 3.32 0.00 30.78 4.61
6725 7916 0.178903 TCTGTACTTGGCCTCCACCT 60.179 55.000 3.32 0.00 30.78 4.00
6726 7917 0.693049 CTGTACTTGGCCTCCACCTT 59.307 55.000 3.32 0.00 30.78 3.50
6727 7918 0.400213 TGTACTTGGCCTCCACCTTG 59.600 55.000 3.32 0.00 30.78 3.61
6728 7919 0.322546 GTACTTGGCCTCCACCTTGG 60.323 60.000 3.32 0.00 39.43 3.61
6729 7920 0.474854 TACTTGGCCTCCACCTTGGA 60.475 55.000 3.32 0.00 45.98 3.53
6730 7921 1.303643 CTTGGCCTCCACCTTGGAC 60.304 63.158 3.32 0.00 42.67 4.02
6731 7922 1.774217 TTGGCCTCCACCTTGGACT 60.774 57.895 3.32 0.00 42.67 3.85
6732 7923 1.360393 TTGGCCTCCACCTTGGACTT 61.360 55.000 3.32 0.00 42.67 3.01
6733 7924 1.002011 GGCCTCCACCTTGGACTTC 60.002 63.158 0.00 0.00 42.67 3.01
6734 7925 1.002011 GCCTCCACCTTGGACTTCC 60.002 63.158 0.00 0.00 42.67 3.46
6735 7926 1.779061 GCCTCCACCTTGGACTTCCA 61.779 60.000 0.00 0.00 42.67 3.53
6744 7935 2.377136 TGGACTTCCAGAGCTTCCC 58.623 57.895 0.00 0.00 42.01 3.97
6745 7936 1.219393 GGACTTCCAGAGCTTCCCG 59.781 63.158 0.00 0.00 35.64 5.14
6746 7937 1.545706 GGACTTCCAGAGCTTCCCGT 61.546 60.000 0.00 0.00 35.64 5.28
6747 7938 1.183549 GACTTCCAGAGCTTCCCGTA 58.816 55.000 0.00 0.00 0.00 4.02
6748 7939 1.135333 GACTTCCAGAGCTTCCCGTAG 59.865 57.143 0.00 0.00 0.00 3.51
6749 7940 1.187087 CTTCCAGAGCTTCCCGTAGT 58.813 55.000 0.00 0.00 0.00 2.73
6750 7941 1.550976 CTTCCAGAGCTTCCCGTAGTT 59.449 52.381 0.00 0.00 0.00 2.24
6751 7942 1.640917 TCCAGAGCTTCCCGTAGTTT 58.359 50.000 0.00 0.00 0.00 2.66
6752 7943 1.549170 TCCAGAGCTTCCCGTAGTTTC 59.451 52.381 0.00 0.00 0.00 2.78
6753 7944 1.405661 CCAGAGCTTCCCGTAGTTTCC 60.406 57.143 0.00 0.00 0.00 3.13
6754 7945 1.275291 CAGAGCTTCCCGTAGTTTCCA 59.725 52.381 0.00 0.00 0.00 3.53
6755 7946 2.093447 CAGAGCTTCCCGTAGTTTCCAT 60.093 50.000 0.00 0.00 0.00 3.41
6756 7947 2.168728 AGAGCTTCCCGTAGTTTCCATC 59.831 50.000 0.00 0.00 0.00 3.51
6757 7948 1.134788 AGCTTCCCGTAGTTTCCATCG 60.135 52.381 0.00 0.00 0.00 3.84
6758 7949 1.935933 CTTCCCGTAGTTTCCATCGG 58.064 55.000 0.00 0.00 42.22 4.18
6759 7950 0.108041 TTCCCGTAGTTTCCATCGGC 60.108 55.000 0.00 0.00 41.38 5.54
6760 7951 1.219664 CCCGTAGTTTCCATCGGCA 59.780 57.895 0.00 0.00 41.38 5.69
6761 7952 0.391927 CCCGTAGTTTCCATCGGCAA 60.392 55.000 0.00 0.00 41.38 4.52
6762 7953 1.663695 CCGTAGTTTCCATCGGCAAT 58.336 50.000 0.00 0.00 36.68 3.56
6763 7954 1.330521 CCGTAGTTTCCATCGGCAATG 59.669 52.381 0.00 0.00 36.68 2.82
6772 7963 2.838386 CATCGGCAATGGAGTCAAAG 57.162 50.000 0.00 0.00 0.00 2.77
6773 7964 2.358957 CATCGGCAATGGAGTCAAAGA 58.641 47.619 0.00 0.00 0.00 2.52
6774 7965 2.559698 TCGGCAATGGAGTCAAAGAA 57.440 45.000 0.00 0.00 0.00 2.52
6775 7966 2.151202 TCGGCAATGGAGTCAAAGAAC 58.849 47.619 0.00 0.00 0.00 3.01
6776 7967 2.154462 CGGCAATGGAGTCAAAGAACT 58.846 47.619 0.00 0.00 0.00 3.01
6777 7968 2.160417 CGGCAATGGAGTCAAAGAACTC 59.840 50.000 0.00 0.00 44.08 3.01
6778 7969 2.160417 GGCAATGGAGTCAAAGAACTCG 59.840 50.000 0.00 0.00 45.45 4.18
6779 7970 3.067106 GCAATGGAGTCAAAGAACTCGA 58.933 45.455 0.00 0.00 45.45 4.04
6780 7971 3.498397 GCAATGGAGTCAAAGAACTCGAA 59.502 43.478 0.00 0.00 45.45 3.71
6781 7972 4.024048 GCAATGGAGTCAAAGAACTCGAAA 60.024 41.667 0.00 0.00 45.45 3.46
6782 7973 5.444122 CAATGGAGTCAAAGAACTCGAAAC 58.556 41.667 0.00 0.00 45.45 2.78
6783 7974 3.120792 TGGAGTCAAAGAACTCGAAACG 58.879 45.455 0.00 0.00 45.45 3.60
6784 7975 2.475487 GGAGTCAAAGAACTCGAAACGG 59.525 50.000 0.00 0.00 45.45 4.44
6785 7976 3.121544 GAGTCAAAGAACTCGAAACGGT 58.878 45.455 0.00 0.00 36.61 4.83
6786 7977 4.293415 GAGTCAAAGAACTCGAAACGGTA 58.707 43.478 0.00 0.00 36.61 4.02
6787 7978 4.296690 AGTCAAAGAACTCGAAACGGTAG 58.703 43.478 0.00 0.00 0.00 3.18
6788 7979 3.427863 GTCAAAGAACTCGAAACGGTAGG 59.572 47.826 0.00 0.00 0.00 3.18
6789 7980 2.075979 AAGAACTCGAAACGGTAGGC 57.924 50.000 0.00 0.00 0.00 3.93
6790 7981 0.109412 AGAACTCGAAACGGTAGGCG 60.109 55.000 0.00 0.00 0.00 5.52
6791 7982 1.074872 GAACTCGAAACGGTAGGCGG 61.075 60.000 0.00 0.00 0.00 6.13
6792 7983 2.202703 CTCGAAACGGTAGGCGGG 60.203 66.667 0.00 0.00 0.00 6.13
6793 7984 3.711541 CTCGAAACGGTAGGCGGGG 62.712 68.421 0.00 0.00 0.00 5.73
6795 7986 4.091939 GAAACGGTAGGCGGGGCT 62.092 66.667 0.00 0.00 0.00 5.19
6796 7987 2.684655 AAACGGTAGGCGGGGCTA 60.685 61.111 0.00 0.00 0.00 3.93
6797 7988 2.639883 GAAACGGTAGGCGGGGCTAG 62.640 65.000 1.79 0.00 0.00 3.42
6798 7989 3.970746 AACGGTAGGCGGGGCTAGT 62.971 63.158 1.79 0.00 0.00 2.57
6799 7990 2.203394 CGGTAGGCGGGGCTAGTA 60.203 66.667 1.79 0.00 0.00 1.82
6800 7991 2.266627 CGGTAGGCGGGGCTAGTAG 61.267 68.421 1.79 0.00 0.00 2.57
6801 7992 1.152589 GGTAGGCGGGGCTAGTAGT 60.153 63.158 1.79 0.00 0.00 2.73
6802 7993 1.461911 GGTAGGCGGGGCTAGTAGTG 61.462 65.000 1.79 0.00 0.00 2.74
6803 7994 0.754587 GTAGGCGGGGCTAGTAGTGT 60.755 60.000 1.79 0.00 0.00 3.55
6804 7995 0.846015 TAGGCGGGGCTAGTAGTGTA 59.154 55.000 0.00 0.00 0.00 2.90
6805 7996 0.467659 AGGCGGGGCTAGTAGTGTAG 60.468 60.000 0.00 0.00 0.00 2.74
6806 7997 1.461911 GGCGGGGCTAGTAGTGTAGG 61.462 65.000 0.00 0.00 0.00 3.18
6807 7998 0.466922 GCGGGGCTAGTAGTGTAGGA 60.467 60.000 0.00 0.00 0.00 2.94
6808 7999 1.822457 GCGGGGCTAGTAGTGTAGGAT 60.822 57.143 0.00 0.00 0.00 3.24
6809 8000 1.887198 CGGGGCTAGTAGTGTAGGATG 59.113 57.143 0.00 0.00 0.00 3.51
6810 8001 1.619332 GGGGCTAGTAGTGTAGGATGC 59.381 57.143 0.00 0.00 0.00 3.91
6811 8002 2.317040 GGGCTAGTAGTGTAGGATGCA 58.683 52.381 0.00 0.00 0.00 3.96
6812 8003 2.297597 GGGCTAGTAGTGTAGGATGCAG 59.702 54.545 0.00 0.00 0.00 4.41
6813 8004 2.288518 GGCTAGTAGTGTAGGATGCAGC 60.289 54.545 0.00 0.00 0.00 5.25
6814 8005 2.362397 GCTAGTAGTGTAGGATGCAGCA 59.638 50.000 3.51 0.00 0.00 4.41
6815 8006 3.551863 GCTAGTAGTGTAGGATGCAGCAG 60.552 52.174 3.51 0.00 0.00 4.24
6816 8007 1.137872 AGTAGTGTAGGATGCAGCAGC 59.862 52.381 3.51 0.62 42.57 5.25
6832 8023 3.365535 GCATTTGCGGTTCCAGGT 58.634 55.556 0.00 0.00 0.00 4.00
6833 8024 1.080569 GCATTTGCGGTTCCAGGTG 60.081 57.895 0.00 0.00 0.00 4.00
6834 8025 1.523154 GCATTTGCGGTTCCAGGTGA 61.523 55.000 0.00 0.00 0.00 4.02
6835 8026 1.176527 CATTTGCGGTTCCAGGTGAT 58.823 50.000 0.00 0.00 0.00 3.06
6836 8027 1.133025 CATTTGCGGTTCCAGGTGATC 59.867 52.381 0.00 0.00 0.00 2.92
6837 8028 0.109532 TTTGCGGTTCCAGGTGATCA 59.890 50.000 0.00 0.00 0.00 2.92
6838 8029 0.605319 TTGCGGTTCCAGGTGATCAC 60.605 55.000 17.91 17.91 0.00 3.06
6839 8030 1.003839 GCGGTTCCAGGTGATCACA 60.004 57.895 26.47 3.72 0.00 3.58
6840 8031 0.392998 GCGGTTCCAGGTGATCACAT 60.393 55.000 26.47 18.11 0.00 3.21
6841 8032 1.656652 CGGTTCCAGGTGATCACATC 58.343 55.000 26.47 10.86 0.00 3.06
6842 8033 1.656652 GGTTCCAGGTGATCACATCG 58.343 55.000 26.47 13.47 31.58 3.84
6843 8034 1.066143 GGTTCCAGGTGATCACATCGT 60.066 52.381 26.47 5.85 31.58 3.73
6844 8035 2.002586 GTTCCAGGTGATCACATCGTG 58.997 52.381 26.47 16.57 34.45 4.35
6845 8036 1.266178 TCCAGGTGATCACATCGTGT 58.734 50.000 26.47 1.59 34.79 4.49
6846 8037 1.204704 TCCAGGTGATCACATCGTGTC 59.795 52.381 26.47 7.96 34.79 3.67
6847 8038 1.205655 CCAGGTGATCACATCGTGTCT 59.794 52.381 26.47 10.14 34.79 3.41
6848 8039 2.354103 CCAGGTGATCACATCGTGTCTT 60.354 50.000 26.47 0.00 34.79 3.01
6849 8040 2.669924 CAGGTGATCACATCGTGTCTTG 59.330 50.000 26.47 2.08 34.79 3.02
6850 8041 1.394917 GGTGATCACATCGTGTCTTGC 59.605 52.381 26.47 1.54 34.79 4.01
6851 8042 1.394917 GTGATCACATCGTGTCTTGCC 59.605 52.381 21.07 0.00 34.79 4.52
6852 8043 1.001860 TGATCACATCGTGTCTTGCCA 59.998 47.619 0.00 0.00 34.79 4.92
6853 8044 2.076100 GATCACATCGTGTCTTGCCAA 58.924 47.619 0.00 0.00 34.79 4.52
6854 8045 1.960417 TCACATCGTGTCTTGCCAAA 58.040 45.000 0.00 0.00 34.79 3.28
6855 8046 1.872952 TCACATCGTGTCTTGCCAAAG 59.127 47.619 0.00 0.00 34.79 2.77
6856 8047 0.593128 ACATCGTGTCTTGCCAAAGC 59.407 50.000 0.00 0.00 40.48 3.51
6868 8059 1.689959 GCCAAAGCAAGAACGATGTG 58.310 50.000 0.00 0.00 39.53 3.21
6869 8060 1.666888 GCCAAAGCAAGAACGATGTGG 60.667 52.381 0.00 0.00 39.53 4.17
6870 8061 1.666888 CCAAAGCAAGAACGATGTGGC 60.667 52.381 0.00 0.00 0.00 5.01
6871 8062 0.238289 AAAGCAAGAACGATGTGGCG 59.762 50.000 0.00 0.00 37.29 5.69
6872 8063 2.187599 AAGCAAGAACGATGTGGCGC 62.188 55.000 0.00 0.00 33.86 6.53
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
55 56 2.582226 CGCGGCGCTCAGAACATA 60.582 61.111 30.54 0.00 0.00 2.29
362 388 0.476338 TTTGGTCTTGGTGCCAGCTA 59.524 50.000 0.00 0.00 36.00 3.32
363 389 0.396974 TTTTGGTCTTGGTGCCAGCT 60.397 50.000 0.00 0.00 36.00 4.24
364 390 0.032540 CTTTTGGTCTTGGTGCCAGC 59.967 55.000 0.00 0.00 36.00 4.85
365 391 0.032540 GCTTTTGGTCTTGGTGCCAG 59.967 55.000 0.00 0.00 36.00 4.85
366 392 1.398958 GGCTTTTGGTCTTGGTGCCA 61.399 55.000 0.00 0.00 38.79 4.92
367 393 1.367471 GGCTTTTGGTCTTGGTGCC 59.633 57.895 0.00 0.00 0.00 5.01
368 394 0.463620 TTGGCTTTTGGTCTTGGTGC 59.536 50.000 0.00 0.00 0.00 5.01
369 395 1.538849 GCTTGGCTTTTGGTCTTGGTG 60.539 52.381 0.00 0.00 0.00 4.17
370 396 0.752658 GCTTGGCTTTTGGTCTTGGT 59.247 50.000 0.00 0.00 0.00 3.67
371 397 1.043022 AGCTTGGCTTTTGGTCTTGG 58.957 50.000 0.00 0.00 33.89 3.61
372 398 1.870993 GCAGCTTGGCTTTTGGTCTTG 60.871 52.381 0.00 0.00 36.40 3.02
373 399 0.390492 GCAGCTTGGCTTTTGGTCTT 59.610 50.000 0.00 0.00 36.40 3.01
374 400 0.756442 TGCAGCTTGGCTTTTGGTCT 60.756 50.000 0.00 0.00 36.40 3.85
375 401 0.598419 GTGCAGCTTGGCTTTTGGTC 60.598 55.000 0.00 0.00 36.40 4.02
376 402 1.044790 AGTGCAGCTTGGCTTTTGGT 61.045 50.000 0.00 0.00 36.40 3.67
377 403 0.961019 TAGTGCAGCTTGGCTTTTGG 59.039 50.000 0.00 0.00 36.40 3.28
378 404 2.342910 CTAGTGCAGCTTGGCTTTTG 57.657 50.000 0.00 0.00 36.40 2.44
397 423 0.453390 GCAGAACCACCAGCAATAGC 59.547 55.000 0.00 0.00 42.56 2.97
398 424 2.119801 AGCAGAACCACCAGCAATAG 57.880 50.000 0.00 0.00 0.00 1.73
399 425 2.224744 TGAAGCAGAACCACCAGCAATA 60.225 45.455 0.00 0.00 0.00 1.90
400 426 1.251251 GAAGCAGAACCACCAGCAAT 58.749 50.000 0.00 0.00 0.00 3.56
461 522 7.992180 TGAATTTCAGAGCTGTTTTTCTTTC 57.008 32.000 0.00 0.00 0.00 2.62
481 543 6.817641 TGAAAAACACAGACAAGCAAATGAAT 59.182 30.769 0.00 0.00 0.00 2.57
484 546 6.592798 ATGAAAAACACAGACAAGCAAATG 57.407 33.333 0.00 0.00 0.00 2.32
495 557 9.859427 ATTTCCACACATATATGAAAAACACAG 57.141 29.630 19.63 0.87 0.00 3.66
506 568 6.239373 CCATGCCACAATTTCCACACATATAT 60.239 38.462 0.00 0.00 0.00 0.86
510 572 2.027929 CCATGCCACAATTTCCACACAT 60.028 45.455 0.00 0.00 0.00 3.21
530 592 4.058817 CCCTTCACGATAAAGTCTATGCC 58.941 47.826 0.00 0.00 0.00 4.40
698 783 4.336713 GTGGACTGGGCAAGAAGATTATTC 59.663 45.833 0.00 0.00 0.00 1.75
785 879 2.241176 AGAGAGAGAGACCACCCACTAG 59.759 54.545 0.00 0.00 0.00 2.57
995 1127 7.694093 AGAAAGATAATGGATCCTCCCAATAC 58.306 38.462 14.23 0.00 40.04 1.89
1045 1177 0.998945 AGAGAGAGAGGGAGGGAGGG 60.999 65.000 0.00 0.00 0.00 4.30
1050 1182 2.412591 AGAGAGAGAGAGAGAGGGAGG 58.587 57.143 0.00 0.00 0.00 4.30
1052 1184 5.093236 AGATAGAGAGAGAGAGAGAGGGA 57.907 47.826 0.00 0.00 0.00 4.20
1053 1185 5.832539 AAGATAGAGAGAGAGAGAGAGGG 57.167 47.826 0.00 0.00 0.00 4.30
1054 1186 7.453126 AGAGTAAGATAGAGAGAGAGAGAGAGG 59.547 44.444 0.00 0.00 0.00 3.69
1055 1187 8.415950 AGAGTAAGATAGAGAGAGAGAGAGAG 57.584 42.308 0.00 0.00 0.00 3.20
1056 1188 8.228206 AGAGAGTAAGATAGAGAGAGAGAGAGA 58.772 40.741 0.00 0.00 0.00 3.10
1066 1198 6.296778 GGGCTATGGAGAGAGTAAGATAGAGA 60.297 46.154 0.00 0.00 0.00 3.10
1091 1223 0.825840 GATCTCCTCCTCCTCCACCG 60.826 65.000 0.00 0.00 0.00 4.94
1180 1324 2.540910 AGTGAGGGAGGGGAGGGA 60.541 66.667 0.00 0.00 0.00 4.20
1181 1325 2.041405 GAGTGAGGGAGGGGAGGG 60.041 72.222 0.00 0.00 0.00 4.30
1182 1326 2.041405 GGAGTGAGGGAGGGGAGG 60.041 72.222 0.00 0.00 0.00 4.30
1183 1327 2.041405 GGGAGTGAGGGAGGGGAG 60.041 72.222 0.00 0.00 0.00 4.30
1184 1328 2.182858 GAAGGGAGTGAGGGAGGGGA 62.183 65.000 0.00 0.00 0.00 4.81
1185 1329 1.690985 GAAGGGAGTGAGGGAGGGG 60.691 68.421 0.00 0.00 0.00 4.79
1186 1330 1.690985 GGAAGGGAGTGAGGGAGGG 60.691 68.421 0.00 0.00 0.00 4.30
1187 1331 0.327000 ATGGAAGGGAGTGAGGGAGG 60.327 60.000 0.00 0.00 0.00 4.30
1188 1332 1.589414 AATGGAAGGGAGTGAGGGAG 58.411 55.000 0.00 0.00 0.00 4.30
1189 1333 2.059756 AAATGGAAGGGAGTGAGGGA 57.940 50.000 0.00 0.00 0.00 4.20
1195 1339 5.254032 AGGTCATAAGAAAATGGAAGGGAGT 59.746 40.000 0.00 0.00 0.00 3.85
1221 1365 3.745803 GTGCAGAGCAAGGCAGGC 61.746 66.667 0.00 0.00 41.47 4.85
1225 1374 2.749441 GGAGGTGCAGAGCAAGGC 60.749 66.667 0.00 0.00 41.47 4.35
1262 1411 4.272991 GCCATACATGCAAGAAGAAGAGAG 59.727 45.833 0.00 0.00 0.00 3.20
1365 1520 0.322546 ATCCAGGAAACCGGAAGCAC 60.323 55.000 9.46 0.00 32.15 4.40
1444 1602 1.209127 GACACCCGTGCAAAATCCG 59.791 57.895 0.00 0.00 0.00 4.18
1461 1620 1.924731 ACCACCTCAGAATCGACTGA 58.075 50.000 5.69 5.69 43.39 3.41
1609 1774 6.633325 AGATATCACATAATTCAGAGGGGG 57.367 41.667 5.32 0.00 0.00 5.40
1640 1805 5.365021 TTGGCAATTTGAGAAGGGAAAAA 57.635 34.783 0.00 0.00 0.00 1.94
1704 1871 9.113838 CACAGATAATAAGCTCAAATTACAGGT 57.886 33.333 0.00 0.00 0.00 4.00
1738 1905 2.529780 TTTGGCCAGCAATCACAAAG 57.470 45.000 5.11 0.00 0.00 2.77
1773 1940 5.814481 AGGAGGAAATCAAGGAGAAAGAAG 58.186 41.667 0.00 0.00 0.00 2.85
1967 2135 4.985044 TTTCGCAGTTTACAAGCTACTC 57.015 40.909 0.00 0.00 0.00 2.59
1988 2159 1.203100 AGGAAACTCCAAGGCAGCAAT 60.203 47.619 0.00 0.00 39.61 3.56
2256 2427 1.937899 ACCGCAGCCATACGAATAAAC 59.062 47.619 0.00 0.00 0.00 2.01
2260 2431 1.459450 AAAACCGCAGCCATACGAAT 58.541 45.000 0.00 0.00 0.00 3.34
2488 2670 3.199880 GGTCCATATGTGGTCCTTCAG 57.800 52.381 15.87 0.00 46.46 3.02
2500 2682 3.951563 TTGCAGGCTAAAGGTCCATAT 57.048 42.857 0.00 0.00 0.00 1.78
2502 2684 2.603075 TTTGCAGGCTAAAGGTCCAT 57.397 45.000 0.00 0.00 0.00 3.41
2504 2686 2.159379 CGAATTTGCAGGCTAAAGGTCC 60.159 50.000 0.00 0.00 0.00 4.46
2505 2687 2.732282 GCGAATTTGCAGGCTAAAGGTC 60.732 50.000 13.04 0.00 34.15 3.85
2755 2939 9.507329 TGTAAAGCAGTTGAATAAAAGATCTCT 57.493 29.630 0.00 0.00 0.00 3.10
2825 3009 6.906678 GCAACCAAATTTTAAAACTGAGCAAG 59.093 34.615 1.97 0.00 0.00 4.01
2828 3012 6.356757 TGCAACCAAATTTTAAAACTGAGC 57.643 33.333 1.97 9.03 0.00 4.26
2842 3031 5.068987 GGGCTGATAAGAATATGCAACCAAA 59.931 40.000 0.00 0.00 0.00 3.28
2881 3070 1.342374 GGGATCCAACCTCCTGCAATT 60.342 52.381 15.23 0.00 33.05 2.32
2882 3071 0.259938 GGGATCCAACCTCCTGCAAT 59.740 55.000 15.23 0.00 33.05 3.56
2883 3072 1.691219 GGGATCCAACCTCCTGCAA 59.309 57.895 15.23 0.00 33.05 4.08
2884 3073 2.308722 GGGGATCCAACCTCCTGCA 61.309 63.158 15.23 0.00 33.05 4.41
2885 3074 2.597903 GGGGATCCAACCTCCTGC 59.402 66.667 15.23 0.00 33.05 4.85
2886 3075 2.911143 CGGGGATCCAACCTCCTG 59.089 66.667 15.23 0.00 33.05 3.86
2887 3076 3.090532 GCGGGGATCCAACCTCCT 61.091 66.667 15.23 0.00 33.05 3.69
2888 3077 2.493273 TTTGCGGGGATCCAACCTCC 62.493 60.000 15.23 3.82 0.00 4.30
2889 3078 0.610785 TTTTGCGGGGATCCAACCTC 60.611 55.000 15.23 1.82 0.00 3.85
2890 3079 0.041090 ATTTTGCGGGGATCCAACCT 59.959 50.000 15.23 0.00 0.00 3.50
2891 3080 1.770294 TATTTTGCGGGGATCCAACC 58.230 50.000 15.23 5.45 0.00 3.77
2892 3081 3.878160 TTTATTTTGCGGGGATCCAAC 57.122 42.857 15.23 4.74 0.00 3.77
2893 3082 6.546428 TTTATTTATTTTGCGGGGATCCAA 57.454 33.333 15.23 0.00 0.00 3.53
2894 3083 6.739331 ATTTATTTATTTTGCGGGGATCCA 57.261 33.333 15.23 0.00 0.00 3.41
2895 3084 6.073276 GCAATTTATTTATTTTGCGGGGATCC 60.073 38.462 1.92 1.92 35.62 3.36
2896 3085 6.481644 TGCAATTTATTTATTTTGCGGGGATC 59.518 34.615 0.00 0.00 45.66 3.36
2897 3086 6.352516 TGCAATTTATTTATTTTGCGGGGAT 58.647 32.000 0.00 0.00 45.66 3.85
2898 3087 5.734720 TGCAATTTATTTATTTTGCGGGGA 58.265 33.333 0.00 0.00 45.66 4.81
2899 3088 6.046885 CTGCAATTTATTTATTTTGCGGGG 57.953 37.500 7.29 0.00 45.66 5.73
2901 3090 6.018832 CCTCCTGCAATTTATTTATTTTGCGG 60.019 38.462 8.05 8.05 45.66 5.69
2902 3091 6.534793 ACCTCCTGCAATTTATTTATTTTGCG 59.465 34.615 0.00 0.00 45.66 4.85
2903 3092 7.848223 ACCTCCTGCAATTTATTTATTTTGC 57.152 32.000 0.00 0.00 43.60 3.68
2904 3093 8.667463 CCAACCTCCTGCAATTTATTTATTTTG 58.333 33.333 0.00 0.00 0.00 2.44
2905 3094 8.601546 TCCAACCTCCTGCAATTTATTTATTTT 58.398 29.630 0.00 0.00 0.00 1.82
2906 3095 8.144862 TCCAACCTCCTGCAATTTATTTATTT 57.855 30.769 0.00 0.00 0.00 1.40
2907 3096 7.732222 TCCAACCTCCTGCAATTTATTTATT 57.268 32.000 0.00 0.00 0.00 1.40
2908 3097 7.919385 ATCCAACCTCCTGCAATTTATTTAT 57.081 32.000 0.00 0.00 0.00 1.40
2909 3098 7.398618 TCAATCCAACCTCCTGCAATTTATTTA 59.601 33.333 0.00 0.00 0.00 1.40
2910 3099 6.213195 TCAATCCAACCTCCTGCAATTTATTT 59.787 34.615 0.00 0.00 0.00 1.40
2911 3100 5.721000 TCAATCCAACCTCCTGCAATTTATT 59.279 36.000 0.00 0.00 0.00 1.40
2912 3101 5.271598 TCAATCCAACCTCCTGCAATTTAT 58.728 37.500 0.00 0.00 0.00 1.40
2913 3102 4.671831 TCAATCCAACCTCCTGCAATTTA 58.328 39.130 0.00 0.00 0.00 1.40
2914 3103 3.509442 TCAATCCAACCTCCTGCAATTT 58.491 40.909 0.00 0.00 0.00 1.82
2915 3104 3.173953 TCAATCCAACCTCCTGCAATT 57.826 42.857 0.00 0.00 0.00 2.32
3134 3323 1.555075 TCAGTGTATGGCCCAGAAGAC 59.445 52.381 0.00 0.00 0.00 3.01
3281 3470 2.809601 ACATGACCGAACGAGCGC 60.810 61.111 0.00 0.00 0.00 5.92
3446 3635 1.228552 GCCTTGCCCTTGACCTTGA 60.229 57.895 0.00 0.00 0.00 3.02
3554 3743 6.282167 GTCTATTCTAAGGCTTTCCTGGTAC 58.718 44.000 4.45 0.00 43.40 3.34
3632 3821 2.191400 TGAGCTGCCTTGAGATACCTT 58.809 47.619 0.00 0.00 0.00 3.50
3879 4068 6.449698 CAGCAATTGAAAATAGTCACCAACT 58.550 36.000 10.34 0.00 42.33 3.16
3892 4081 4.935352 AAGGTACAAGCAGCAATTGAAA 57.065 36.364 10.34 0.00 0.00 2.69
3924 4113 8.891671 AATCTGCATTGAGTTGTTTGTATTTT 57.108 26.923 0.00 0.00 0.00 1.82
4023 4212 5.010516 AGTCTCATCCAGAATCTACCAATCG 59.989 44.000 0.00 0.00 30.72 3.34
4467 4656 2.638363 GTTTTCAGGTAGTCCCCTCTGT 59.362 50.000 0.00 0.00 30.33 3.41
4479 4668 3.832615 ACTGTAACCGAGTTTTCAGGT 57.167 42.857 16.89 0.00 40.50 4.00
4545 4734 9.696917 ACAAATGGATTAAACTTCATGAAGAAC 57.303 29.630 36.15 20.09 40.79 3.01
4581 4786 6.799512 AGAACAAATGGTCTTGACAGAAAAG 58.200 36.000 0.00 0.00 39.48 2.27
4663 4868 0.170561 CAGTCTGCCTTGCAAGCATC 59.829 55.000 21.43 15.95 40.04 3.91
4718 4923 6.159299 TCAATGATTTCAGCACAGGAAAAA 57.841 33.333 0.00 0.00 37.74 1.94
4832 5038 4.397730 ACAAACAAGTACAGTGTGCAATGA 59.602 37.500 19.05 0.00 0.00 2.57
4979 5186 7.065324 AGCGTTTATGAACCAATTCGAAATCTA 59.935 33.333 0.00 0.00 37.69 1.98
5056 5263 1.552337 GAGTCTTGCTCCAGATCACCA 59.448 52.381 0.00 0.00 38.27 4.17
5173 5380 0.035056 AATCGCTTAGCTGGCTGGTT 60.035 50.000 1.76 0.00 0.00 3.67
5191 5398 1.604147 TTCCGATGCTGGCTCTCGAA 61.604 55.000 15.53 8.28 34.41 3.71
5206 5413 1.330521 CCGCCAACATTCATAGTTCCG 59.669 52.381 0.00 0.00 0.00 4.30
5316 5523 1.151810 TTGTGGAGGAGGAGGCCTT 60.152 57.895 6.77 0.00 38.73 4.35
5422 5629 2.603473 TGTAGGCCCAGCGTCAGT 60.603 61.111 0.00 0.00 0.00 3.41
5458 5665 0.243636 CTTGGGCATTTGGAACCGAC 59.756 55.000 0.00 0.00 0.00 4.79
5551 5758 5.723672 TCTGGTTCAAAGATTCGTAGTCT 57.276 39.130 0.00 0.00 0.00 3.24
5632 5839 5.398169 GTCCTGATCTGACGTATCATCATC 58.602 45.833 0.38 0.00 33.08 2.92
5639 5846 3.960755 TCAATGGTCCTGATCTGACGTAT 59.039 43.478 0.38 1.03 33.46 3.06
5643 5850 3.265791 GTGTCAATGGTCCTGATCTGAC 58.734 50.000 0.38 4.43 34.99 3.51
5727 6243 1.705186 ACTACAACCCCATGCTCTTGT 59.295 47.619 5.70 5.70 0.00 3.16
5891 6420 6.821665 GTGGCCATTACTTTACAATACTGAGA 59.178 38.462 9.72 0.00 0.00 3.27
5965 6519 7.284489 CCTTTAGCTGGCCAATACTTTACAATA 59.716 37.037 7.01 0.00 0.00 1.90
5966 6520 6.096846 CCTTTAGCTGGCCAATACTTTACAAT 59.903 38.462 7.01 0.00 0.00 2.71
5967 6521 5.417580 CCTTTAGCTGGCCAATACTTTACAA 59.582 40.000 7.01 0.00 0.00 2.41
5968 6522 4.947388 CCTTTAGCTGGCCAATACTTTACA 59.053 41.667 7.01 0.00 0.00 2.41
5969 6523 4.948004 ACCTTTAGCTGGCCAATACTTTAC 59.052 41.667 7.01 0.00 0.00 2.01
5970 6524 4.947388 CACCTTTAGCTGGCCAATACTTTA 59.053 41.667 7.01 0.00 0.00 1.85
5971 6525 3.763897 CACCTTTAGCTGGCCAATACTTT 59.236 43.478 7.01 0.00 0.00 2.66
5972 6526 3.356290 CACCTTTAGCTGGCCAATACTT 58.644 45.455 7.01 0.00 0.00 2.24
5973 6527 2.357154 CCACCTTTAGCTGGCCAATACT 60.357 50.000 7.01 7.41 0.00 2.12
5974 6528 2.024414 CCACCTTTAGCTGGCCAATAC 58.976 52.381 7.01 0.00 0.00 1.89
5975 6529 1.638589 ACCACCTTTAGCTGGCCAATA 59.361 47.619 7.01 0.00 0.00 1.90
5976 6530 0.409484 ACCACCTTTAGCTGGCCAAT 59.591 50.000 7.01 0.04 0.00 3.16
5977 6531 0.251165 GACCACCTTTAGCTGGCCAA 60.251 55.000 7.01 0.00 0.00 4.52
5978 6532 1.378762 GACCACCTTTAGCTGGCCA 59.621 57.895 4.71 4.71 0.00 5.36
5979 6533 1.378646 GGACCACCTTTAGCTGGCC 60.379 63.158 0.00 0.00 0.00 5.36
5980 6534 0.251165 TTGGACCACCTTTAGCTGGC 60.251 55.000 0.00 0.00 37.04 4.85
5981 6535 2.286365 TTTGGACCACCTTTAGCTGG 57.714 50.000 0.00 0.00 37.04 4.85
5982 6536 4.396166 CAGTATTTGGACCACCTTTAGCTG 59.604 45.833 0.00 0.00 37.04 4.24
5983 6537 4.589908 CAGTATTTGGACCACCTTTAGCT 58.410 43.478 0.00 0.00 37.04 3.32
5984 6538 3.128764 GCAGTATTTGGACCACCTTTAGC 59.871 47.826 0.00 0.00 37.04 3.09
5994 6548 2.227865 TGGAAAAGCGCAGTATTTGGAC 59.772 45.455 11.47 0.00 0.00 4.02
5995 6549 2.509569 TGGAAAAGCGCAGTATTTGGA 58.490 42.857 11.47 0.00 0.00 3.53
5997 6551 5.030295 CAGTATGGAAAAGCGCAGTATTTG 58.970 41.667 11.47 0.00 0.00 2.32
6017 6571 3.006967 ACTGCTCGTTGTCTTTATCCAGT 59.993 43.478 0.00 0.00 0.00 4.00
6019 6573 3.585862 GACTGCTCGTTGTCTTTATCCA 58.414 45.455 0.00 0.00 0.00 3.41
6020 6574 2.599082 CGACTGCTCGTTGTCTTTATCC 59.401 50.000 0.00 0.00 35.00 2.59
6024 6578 1.548973 CGCGACTGCTCGTTGTCTTT 61.549 55.000 0.00 0.00 42.33 2.52
6058 6614 3.561725 CAGGAGAGGGCGAATTATGTTTC 59.438 47.826 0.00 0.00 0.00 2.78
6063 6619 3.322254 CAGTACAGGAGAGGGCGAATTAT 59.678 47.826 0.00 0.00 0.00 1.28
6084 6640 0.321564 CCACTCGCCTTTGTGATCCA 60.322 55.000 0.00 0.00 36.38 3.41
6160 6717 2.136298 TCCTTTTGCCGCCATCATAA 57.864 45.000 0.00 0.00 0.00 1.90
6165 6722 0.967380 CTCCTTCCTTTTGCCGCCAT 60.967 55.000 0.00 0.00 0.00 4.40
6173 6730 1.149101 TGCCACCTCTCCTTCCTTTT 58.851 50.000 0.00 0.00 0.00 2.27
6174 6731 1.149101 TTGCCACCTCTCCTTCCTTT 58.851 50.000 0.00 0.00 0.00 3.11
6235 6794 6.489022 GGTTTTCCAAACCGCTATATAAGGAT 59.511 38.462 10.05 0.00 40.31 3.24
6297 6856 2.798689 CTCCCGCAATCGACTCGA 59.201 61.111 3.06 3.06 41.13 4.04
6317 6876 1.810030 CAGCTTAGTCGGTTCGGGC 60.810 63.158 0.00 0.00 0.00 6.13
6341 6900 1.303799 GGCTAGAGTCGTGACGGACA 61.304 60.000 4.70 0.00 39.42 4.02
6356 6915 4.431416 TTTGGAAAACTCAGTCTGGCTA 57.569 40.909 0.00 0.00 0.00 3.93
6357 6916 3.297134 TTTGGAAAACTCAGTCTGGCT 57.703 42.857 0.00 0.00 0.00 4.75
6358 6917 3.130340 TGTTTTGGAAAACTCAGTCTGGC 59.870 43.478 14.42 0.00 46.37 4.85
6359 6918 4.734695 GCTGTTTTGGAAAACTCAGTCTGG 60.735 45.833 14.42 0.00 46.37 3.86
6366 6925 9.489393 CTTTATTTTTGCTGTTTTGGAAAACTC 57.511 29.630 14.42 8.12 46.37 3.01
6428 7034 0.523966 CTCCTCGCTCGTCTCAACTT 59.476 55.000 0.00 0.00 0.00 2.66
6429 7035 1.309499 CCTCCTCGCTCGTCTCAACT 61.309 60.000 0.00 0.00 0.00 3.16
6430 7036 1.137825 CCTCCTCGCTCGTCTCAAC 59.862 63.158 0.00 0.00 0.00 3.18
6431 7037 1.002502 TCCTCCTCGCTCGTCTCAA 60.003 57.895 0.00 0.00 0.00 3.02
6432 7038 1.450491 CTCCTCCTCGCTCGTCTCA 60.450 63.158 0.00 0.00 0.00 3.27
6455 7074 4.865905 AGTGAGAATAAGAGAGCCTCTCA 58.134 43.478 23.11 4.33 45.73 3.27
6511 7130 1.595382 GCTGGACGAGTTGCACACT 60.595 57.895 0.00 0.00 39.07 3.55
6523 7145 0.537188 TCCCATCTCGAAAGCTGGAC 59.463 55.000 0.00 0.00 0.00 4.02
6528 7150 3.863041 AGTTTAGTCCCATCTCGAAAGC 58.137 45.455 0.00 0.00 0.00 3.51
6537 7159 3.655777 TGGAGTGGAAAGTTTAGTCCCAT 59.344 43.478 9.00 0.00 33.83 4.00
6641 7406 0.905337 AACTTGGCTAGCCGAGGTCT 60.905 55.000 41.52 27.99 43.90 3.85
6642 7407 0.741221 CAACTTGGCTAGCCGAGGTC 60.741 60.000 41.52 16.27 43.90 3.85
6649 7840 2.095059 CACCAATGACAACTTGGCTAGC 60.095 50.000 6.04 6.04 45.83 3.42
6657 7848 4.330250 CAAGATCCTCACCAATGACAACT 58.670 43.478 0.00 0.00 0.00 3.16
6687 7878 3.688673 CAGATTCTTCTTCTGGCTGTTCC 59.311 47.826 0.00 0.00 37.53 3.62
6688 7879 4.322567 ACAGATTCTTCTTCTGGCTGTTC 58.677 43.478 5.75 0.00 43.95 3.18
6689 7880 4.363991 ACAGATTCTTCTTCTGGCTGTT 57.636 40.909 5.75 0.00 43.95 3.16
6690 7881 4.530161 AGTACAGATTCTTCTTCTGGCTGT 59.470 41.667 0.00 0.00 43.95 4.40
6691 7882 5.083533 AGTACAGATTCTTCTTCTGGCTG 57.916 43.478 5.75 0.00 43.95 4.85
6692 7883 5.486526 CAAGTACAGATTCTTCTTCTGGCT 58.513 41.667 5.75 1.19 43.95 4.75
6693 7884 4.633565 CCAAGTACAGATTCTTCTTCTGGC 59.366 45.833 5.75 0.00 43.95 4.85
6694 7885 4.633565 GCCAAGTACAGATTCTTCTTCTGG 59.366 45.833 5.75 0.00 43.95 3.86
6695 7886 4.633565 GGCCAAGTACAGATTCTTCTTCTG 59.366 45.833 0.00 0.00 44.95 3.02
6696 7887 4.534103 AGGCCAAGTACAGATTCTTCTTCT 59.466 41.667 5.01 0.00 0.00 2.85
6697 7888 4.837972 AGGCCAAGTACAGATTCTTCTTC 58.162 43.478 5.01 0.00 0.00 2.87
6698 7889 4.323868 GGAGGCCAAGTACAGATTCTTCTT 60.324 45.833 5.01 0.00 0.00 2.52
6699 7890 3.198853 GGAGGCCAAGTACAGATTCTTCT 59.801 47.826 5.01 0.00 0.00 2.85
6700 7891 3.055094 TGGAGGCCAAGTACAGATTCTTC 60.055 47.826 5.01 0.00 0.00 2.87
6701 7892 2.912956 TGGAGGCCAAGTACAGATTCTT 59.087 45.455 5.01 0.00 0.00 2.52
6702 7893 2.237392 GTGGAGGCCAAGTACAGATTCT 59.763 50.000 5.01 0.00 34.18 2.40
6703 7894 2.633488 GTGGAGGCCAAGTACAGATTC 58.367 52.381 5.01 0.00 34.18 2.52
6704 7895 1.282157 GGTGGAGGCCAAGTACAGATT 59.718 52.381 5.01 0.00 34.18 2.40
6705 7896 0.912486 GGTGGAGGCCAAGTACAGAT 59.088 55.000 5.01 0.00 34.18 2.90
6706 7897 0.178903 AGGTGGAGGCCAAGTACAGA 60.179 55.000 5.01 0.00 34.18 3.41
6707 7898 0.693049 AAGGTGGAGGCCAAGTACAG 59.307 55.000 5.01 0.00 34.18 2.74
6708 7899 0.400213 CAAGGTGGAGGCCAAGTACA 59.600 55.000 5.01 0.00 34.18 2.90
6709 7900 0.322546 CCAAGGTGGAGGCCAAGTAC 60.323 60.000 5.01 0.00 40.96 2.73
6710 7901 0.474854 TCCAAGGTGGAGGCCAAGTA 60.475 55.000 5.01 0.00 42.67 2.24
6711 7902 1.774217 TCCAAGGTGGAGGCCAAGT 60.774 57.895 5.01 0.00 42.67 3.16
6712 7903 3.170362 TCCAAGGTGGAGGCCAAG 58.830 61.111 5.01 0.00 42.67 3.61
6719 7910 1.352083 CTCTGGAAGTCCAAGGTGGA 58.648 55.000 0.89 0.00 46.97 4.02
6720 7911 0.322008 GCTCTGGAAGTCCAAGGTGG 60.322 60.000 0.89 0.00 46.97 4.61
6721 7912 0.689623 AGCTCTGGAAGTCCAAGGTG 59.310 55.000 0.89 0.00 46.97 4.00
6722 7913 1.349357 GAAGCTCTGGAAGTCCAAGGT 59.651 52.381 0.89 5.21 46.97 3.50
6723 7914 1.339535 GGAAGCTCTGGAAGTCCAAGG 60.340 57.143 0.89 0.00 46.97 3.61
6724 7915 1.339535 GGGAAGCTCTGGAAGTCCAAG 60.340 57.143 0.89 3.80 46.97 3.61
6725 7916 0.693049 GGGAAGCTCTGGAAGTCCAA 59.307 55.000 0.89 0.00 46.97 3.53
6726 7917 1.544825 CGGGAAGCTCTGGAAGTCCA 61.545 60.000 0.00 0.00 45.30 4.02
6727 7918 1.219393 CGGGAAGCTCTGGAAGTCC 59.781 63.158 0.00 0.00 33.76 3.85
6728 7919 1.135333 CTACGGGAAGCTCTGGAAGTC 59.865 57.143 0.00 0.00 33.76 3.01
6729 7920 1.187087 CTACGGGAAGCTCTGGAAGT 58.813 55.000 0.00 0.00 33.76 3.01
6730 7921 1.187087 ACTACGGGAAGCTCTGGAAG 58.813 55.000 0.00 0.00 0.00 3.46
6731 7922 1.640917 AACTACGGGAAGCTCTGGAA 58.359 50.000 0.00 0.00 0.00 3.53
6732 7923 1.549170 GAAACTACGGGAAGCTCTGGA 59.451 52.381 0.00 0.00 0.00 3.86
6733 7924 1.405661 GGAAACTACGGGAAGCTCTGG 60.406 57.143 0.00 0.00 0.00 3.86
6734 7925 1.275291 TGGAAACTACGGGAAGCTCTG 59.725 52.381 0.00 0.00 0.00 3.35
6735 7926 1.640917 TGGAAACTACGGGAAGCTCT 58.359 50.000 0.00 0.00 0.00 4.09
6736 7927 2.552031 GATGGAAACTACGGGAAGCTC 58.448 52.381 0.00 0.00 0.00 4.09
6737 7928 1.134788 CGATGGAAACTACGGGAAGCT 60.135 52.381 0.00 0.00 0.00 3.74
6738 7929 1.287425 CGATGGAAACTACGGGAAGC 58.713 55.000 0.00 0.00 0.00 3.86
6739 7930 1.935933 CCGATGGAAACTACGGGAAG 58.064 55.000 0.00 0.00 42.58 3.46
6740 7931 0.108041 GCCGATGGAAACTACGGGAA 60.108 55.000 0.00 0.00 44.89 3.97
6741 7932 1.259142 TGCCGATGGAAACTACGGGA 61.259 55.000 0.00 0.00 44.89 5.14
6742 7933 0.391927 TTGCCGATGGAAACTACGGG 60.392 55.000 0.00 0.00 44.89 5.28
6743 7934 1.330521 CATTGCCGATGGAAACTACGG 59.669 52.381 0.00 0.00 46.44 4.02
6744 7935 2.737467 CATTGCCGATGGAAACTACG 57.263 50.000 0.00 0.00 31.83 3.51
6753 7944 2.358957 TCTTTGACTCCATTGCCGATG 58.641 47.619 0.00 0.00 35.42 3.84
6754 7945 2.749621 GTTCTTTGACTCCATTGCCGAT 59.250 45.455 0.00 0.00 0.00 4.18
6755 7946 2.151202 GTTCTTTGACTCCATTGCCGA 58.849 47.619 0.00 0.00 0.00 5.54
6756 7947 2.154462 AGTTCTTTGACTCCATTGCCG 58.846 47.619 0.00 0.00 0.00 5.69
6757 7948 2.160417 CGAGTTCTTTGACTCCATTGCC 59.840 50.000 0.00 0.00 42.41 4.52
6758 7949 3.067106 TCGAGTTCTTTGACTCCATTGC 58.933 45.455 0.00 0.00 42.41 3.56
6759 7950 5.444122 GTTTCGAGTTCTTTGACTCCATTG 58.556 41.667 0.00 0.00 42.41 2.82
6760 7951 4.211374 CGTTTCGAGTTCTTTGACTCCATT 59.789 41.667 0.00 0.00 42.41 3.16
6761 7952 3.741344 CGTTTCGAGTTCTTTGACTCCAT 59.259 43.478 0.00 0.00 42.41 3.41
6762 7953 3.120792 CGTTTCGAGTTCTTTGACTCCA 58.879 45.455 0.00 0.00 42.41 3.86
6763 7954 2.475487 CCGTTTCGAGTTCTTTGACTCC 59.525 50.000 0.00 0.00 42.41 3.85
6764 7955 3.121544 ACCGTTTCGAGTTCTTTGACTC 58.878 45.455 0.00 0.00 42.05 3.36
6765 7956 3.175109 ACCGTTTCGAGTTCTTTGACT 57.825 42.857 0.00 0.00 0.00 3.41
6766 7957 3.427863 CCTACCGTTTCGAGTTCTTTGAC 59.572 47.826 0.00 0.00 0.00 3.18
6767 7958 3.645884 CCTACCGTTTCGAGTTCTTTGA 58.354 45.455 0.00 0.00 0.00 2.69
6768 7959 2.157085 GCCTACCGTTTCGAGTTCTTTG 59.843 50.000 0.00 0.00 0.00 2.77
6769 7960 2.410939 GCCTACCGTTTCGAGTTCTTT 58.589 47.619 0.00 0.00 0.00 2.52
6770 7961 1.668047 CGCCTACCGTTTCGAGTTCTT 60.668 52.381 0.00 0.00 0.00 2.52
6771 7962 0.109412 CGCCTACCGTTTCGAGTTCT 60.109 55.000 0.00 0.00 0.00 3.01
6772 7963 1.074872 CCGCCTACCGTTTCGAGTTC 61.075 60.000 0.00 0.00 34.38 3.01
6773 7964 1.080298 CCGCCTACCGTTTCGAGTT 60.080 57.895 0.00 0.00 34.38 3.01
6774 7965 2.570181 CCGCCTACCGTTTCGAGT 59.430 61.111 0.00 0.00 34.38 4.18
6775 7966 2.202703 CCCGCCTACCGTTTCGAG 60.203 66.667 0.00 0.00 34.38 4.04
6776 7967 3.762247 CCCCGCCTACCGTTTCGA 61.762 66.667 0.00 0.00 34.38 3.71
6778 7969 2.639883 CTAGCCCCGCCTACCGTTTC 62.640 65.000 0.00 0.00 34.38 2.78
6779 7970 2.684655 TAGCCCCGCCTACCGTTT 60.685 61.111 0.00 0.00 34.38 3.60
6780 7971 2.572333 TACTAGCCCCGCCTACCGTT 62.572 60.000 0.00 0.00 34.38 4.44
6781 7972 2.972892 CTACTAGCCCCGCCTACCGT 62.973 65.000 0.00 0.00 34.38 4.83
6782 7973 2.203394 TACTAGCCCCGCCTACCG 60.203 66.667 0.00 0.00 0.00 4.02
6783 7974 1.152589 ACTACTAGCCCCGCCTACC 60.153 63.158 0.00 0.00 0.00 3.18
6784 7975 0.754587 ACACTACTAGCCCCGCCTAC 60.755 60.000 0.00 0.00 0.00 3.18
6785 7976 0.846015 TACACTACTAGCCCCGCCTA 59.154 55.000 0.00 0.00 0.00 3.93
6786 7977 0.467659 CTACACTACTAGCCCCGCCT 60.468 60.000 0.00 0.00 0.00 5.52
6787 7978 1.461911 CCTACACTACTAGCCCCGCC 61.462 65.000 0.00 0.00 0.00 6.13
6788 7979 0.466922 TCCTACACTACTAGCCCCGC 60.467 60.000 0.00 0.00 0.00 6.13
6789 7980 1.887198 CATCCTACACTACTAGCCCCG 59.113 57.143 0.00 0.00 0.00 5.73
6790 7981 1.619332 GCATCCTACACTACTAGCCCC 59.381 57.143 0.00 0.00 0.00 5.80
6791 7982 2.297597 CTGCATCCTACACTACTAGCCC 59.702 54.545 0.00 0.00 0.00 5.19
6792 7983 2.288518 GCTGCATCCTACACTACTAGCC 60.289 54.545 0.00 0.00 0.00 3.93
6793 7984 2.362397 TGCTGCATCCTACACTACTAGC 59.638 50.000 0.00 0.00 0.00 3.42
6794 7985 3.551863 GCTGCTGCATCCTACACTACTAG 60.552 52.174 11.11 0.00 39.41 2.57
6795 7986 2.362397 GCTGCTGCATCCTACACTACTA 59.638 50.000 11.11 0.00 39.41 1.82
6796 7987 1.137872 GCTGCTGCATCCTACACTACT 59.862 52.381 11.11 0.00 39.41 2.57
6797 7988 1.134699 TGCTGCTGCATCCTACACTAC 60.135 52.381 14.93 0.00 45.31 2.73
6798 7989 1.194218 TGCTGCTGCATCCTACACTA 58.806 50.000 14.93 0.00 45.31 2.74
6799 7990 1.985614 TGCTGCTGCATCCTACACT 59.014 52.632 14.93 0.00 45.31 3.55
6800 7991 4.623814 TGCTGCTGCATCCTACAC 57.376 55.556 14.93 0.00 45.31 2.90
6813 8004 1.213537 CCTGGAACCGCAAATGCTG 59.786 57.895 3.63 0.00 39.32 4.41
6814 8005 1.228552 ACCTGGAACCGCAAATGCT 60.229 52.632 0.00 0.00 39.32 3.79
6815 8006 1.080569 CACCTGGAACCGCAAATGC 60.081 57.895 0.00 0.00 37.78 3.56
6816 8007 1.133025 GATCACCTGGAACCGCAAATG 59.867 52.381 0.00 0.00 0.00 2.32
6817 8008 1.271871 TGATCACCTGGAACCGCAAAT 60.272 47.619 0.00 0.00 0.00 2.32
6818 8009 0.109532 TGATCACCTGGAACCGCAAA 59.890 50.000 0.00 0.00 0.00 3.68
6819 8010 0.605319 GTGATCACCTGGAACCGCAA 60.605 55.000 15.31 0.00 0.00 4.85
6820 8011 1.003839 GTGATCACCTGGAACCGCA 60.004 57.895 15.31 0.00 0.00 5.69
6821 8012 0.392998 ATGTGATCACCTGGAACCGC 60.393 55.000 22.85 0.00 0.00 5.68
6822 8013 1.656652 GATGTGATCACCTGGAACCG 58.343 55.000 22.85 0.00 0.00 4.44
6823 8014 1.066143 ACGATGTGATCACCTGGAACC 60.066 52.381 22.85 0.42 0.00 3.62
6824 8015 2.002586 CACGATGTGATCACCTGGAAC 58.997 52.381 22.85 2.45 35.23 3.62
6825 8016 1.623311 ACACGATGTGATCACCTGGAA 59.377 47.619 22.85 4.25 36.96 3.53
6826 8017 1.204704 GACACGATGTGATCACCTGGA 59.795 52.381 22.85 4.66 36.96 3.86
6827 8018 1.205655 AGACACGATGTGATCACCTGG 59.794 52.381 22.85 16.36 36.96 4.45
6828 8019 2.662006 AGACACGATGTGATCACCTG 57.338 50.000 22.85 14.31 36.96 4.00
6829 8020 2.932622 GCAAGACACGATGTGATCACCT 60.933 50.000 22.85 13.58 36.96 4.00
6830 8021 1.394917 GCAAGACACGATGTGATCACC 59.605 52.381 22.85 7.67 36.96 4.02
6831 8022 1.394917 GGCAAGACACGATGTGATCAC 59.605 52.381 19.27 19.27 36.96 3.06
6832 8023 1.001860 TGGCAAGACACGATGTGATCA 59.998 47.619 3.61 0.00 36.96 2.92
6833 8024 1.725641 TGGCAAGACACGATGTGATC 58.274 50.000 3.61 0.00 36.96 2.92
6834 8025 2.183478 TTGGCAAGACACGATGTGAT 57.817 45.000 3.61 0.00 36.96 3.06
6835 8026 1.872952 CTTTGGCAAGACACGATGTGA 59.127 47.619 3.61 0.00 36.96 3.58
6836 8027 1.664016 GCTTTGGCAAGACACGATGTG 60.664 52.381 0.00 0.00 37.73 3.21
6837 8028 0.593128 GCTTTGGCAAGACACGATGT 59.407 50.000 0.00 0.00 38.54 3.06
6838 8029 0.592637 TGCTTTGGCAAGACACGATG 59.407 50.000 0.00 0.00 46.36 3.84
6839 8030 3.019964 TGCTTTGGCAAGACACGAT 57.980 47.368 0.00 0.00 46.36 3.73
6840 8031 4.549793 TGCTTTGGCAAGACACGA 57.450 50.000 0.00 0.00 46.36 4.35
6849 8040 1.666888 CCACATCGTTCTTGCTTTGGC 60.667 52.381 0.00 0.00 39.26 4.52
6850 8041 1.666888 GCCACATCGTTCTTGCTTTGG 60.667 52.381 0.00 0.00 0.00 3.28
6851 8042 1.689959 GCCACATCGTTCTTGCTTTG 58.310 50.000 0.00 0.00 0.00 2.77
6852 8043 0.238289 CGCCACATCGTTCTTGCTTT 59.762 50.000 0.00 0.00 0.00 3.51
6853 8044 1.868997 CGCCACATCGTTCTTGCTT 59.131 52.632 0.00 0.00 0.00 3.91
6854 8045 2.680913 GCGCCACATCGTTCTTGCT 61.681 57.895 0.00 0.00 0.00 3.91
6855 8046 2.202349 GCGCCACATCGTTCTTGC 60.202 61.111 0.00 0.00 0.00 4.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.