AutoCloner

Multiple sequence alignment - TraesCS5D01G013000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS5D01G013000	chr5D	100.000	2479	0	0	1	2479	7010573	7008095	0.000000e+00	4578
1	TraesCS5D01G013000	chr5D	94.336	1836	56	14	135	1930	365120305	365118478	0.000000e+00	2771
2	TraesCS5D01G013000	chr5D	99.275	138	1	0	1	138	12933517	12933380	1.470000e-62	250
3	TraesCS5D01G013000	chr5D	98.551	138	2	0	1	138	455877511	455877648	6.850000e-61	244
4	TraesCS5D01G013000	chr6D	94.242	1841	56	9	135	1930	31859194	31861029	0.000000e+00	2767
5	TraesCS5D01G013000	chr6D	93.286	1534	56	10	448	1942	427236373	427234848	0.000000e+00	2218
6	TraesCS5D01G013000	chr6D	99.275	138	1	0	1	138	427237062	427236925	1.470000e-62	250
7	TraesCS5D01G013000	chr6D	84.466	103	14	2	1546	1648	31860522	31860622	1.570000e-17	100
8	TraesCS5D01G013000	chr1D	94.230	1837	58	12	135	1930	471281035	471282864	0.000000e+00	2761
9	TraesCS5D01G013000	chr1D	93.792	1804	65	10	135	1897	457576562	457578359	0.000000e+00	2667
10	TraesCS5D01G013000	chr1D	93.165	1741	58	11	135	1835	495409557	495407838	0.000000e+00	2499
11	TraesCS5D01G013000	chr1D	93.623	1129	29	7	840	1930	189394622	189395745	0.000000e+00	1646
12	TraesCS5D01G013000	chr1D	86.614	508	28	6	1461	1930	18338937	18339442	2.180000e-145	525
13	TraesCS5D01G013000	chr1D	98.551	138	2	0	1	138	28017838	28017975	6.850000e-61	244
14	TraesCS5D01G013000	chr1D	98.551	138	2	0	1	138	470557464	470557327	6.850000e-61	244
15	TraesCS5D01G013000	chr2D	94.172	1836	59	11	135	1930	476878904	476880731	0.000000e+00	2754
16	TraesCS5D01G013000	chr2D	94.172	1836	60	13	135	1930	588796723	588794895	0.000000e+00	2754
17	TraesCS5D01G013000	chr2D	94.118	1836	62	9	135	1930	16904528	16906357	0.000000e+00	2750
18	TraesCS5D01G013000	chr2D	92.965	1848	60	14	135	1943	142523244	142521428	0.000000e+00	2628
19	TraesCS5D01G013000	chr2D	92.379	1837	63	24	135	1930	393213289	393211489	0.000000e+00	2545
20	TraesCS5D01G013000	chr2D	99.275	138	1	0	1	138	60191085	60190948	1.470000e-62	250
21	TraesCS5D01G013000	chr3D	94.233	1786	58	11	135	1881	524198638	524200417	0.000000e+00	2686
22	TraesCS5D01G013000	chr3D	93.353	1339	43	8	631	1930	8304073	8302742	0.000000e+00	1938
23	TraesCS5D01G013000	chr3D	93.735	1229	43	10	414	1624	358505624	358506836	0.000000e+00	1812
24	TraesCS5D01G013000	chr3D	89.300	486	34	4	1461	1930	411637908	411637425	5.900000e-166	593
25	TraesCS5D01G013000	chr3D	98.551	138	2	0	1	138	604393889	604394026	6.850000e-61	244
26	TraesCS5D01G013000	chr4D	91.750	1891	92	18	1	1835	484447678	484449560	0.000000e+00	2569
27	TraesCS5D01G013000	chr7D	93.139	1749	62	12	135	1835	585451820	585453558	0.000000e+00	2512
28	TraesCS5D01G013000	chr7D	94.268	314	14	3	1626	1938	536396686	536396996	6.200000e-131	477
29	TraesCS5D01G013000	chr7D	85.714	203	14	3	1461	1648	550273034	550273236	1.500000e-47	200
30	TraesCS5D01G013000	chr5A	90.775	542	28	16	1939	2469	2874464	2873934	0.000000e+00	704
31	TraesCS5D01G013000	chr5A	87.033	509	26	5	1461	1930	77080752	77080245	2.810000e-149	538
32	TraesCS5D01G013000	chr5A	82.879	514	29	11	1461	1930	48343369	48342871	8.250000e-110	407
33	TraesCS5D01G013000	chrUn	88.994	527	34	13	1939	2459	65432508	65433016	4.500000e-177	630
34	TraesCS5D01G013000	chr1A	90.349	487	28	6	1461	1930	331313240	331313724	2.710000e-174	621
35	TraesCS5D01G013000	chr6A	87.841	477	39	9	1461	1920	371241357	371241831	2.170000e-150	542
36	TraesCS5D01G013000	chr5B	98.551	138	2	0	1	138	510452843	510452706	6.850000e-61	244
37	TraesCS5D01G013000	chr6B	81.564	179	18	1	1461	1624	583591484	583591306	1.550000e-27	134

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS5D01G013000	chr5D	7008095	7010573	2478	True	4578.0	4578	100.0000	1	2479	1	chr5D.!!$R1	2478
1	TraesCS5D01G013000	chr5D	365118478	365120305	1827	True	2771.0	2771	94.3360	135	1930	1	chr5D.!!$R3	1795
2	TraesCS5D01G013000	chr6D	31859194	31861029	1835	False	1433.5	2767	89.3540	135	1930	2	chr6D.!!$F1	1795
3	TraesCS5D01G013000	chr6D	427234848	427237062	2214	True	1234.0	2218	96.2805	1	1942	2	chr6D.!!$R1	1941
4	TraesCS5D01G013000	chr1D	471281035	471282864	1829	False	2761.0	2761	94.2300	135	1930	1	chr1D.!!$F5	1795
5	TraesCS5D01G013000	chr1D	457576562	457578359	1797	False	2667.0	2667	93.7920	135	1897	1	chr1D.!!$F4	1762
6	TraesCS5D01G013000	chr1D	495407838	495409557	1719	True	2499.0	2499	93.1650	135	1835	1	chr1D.!!$R2	1700
7	TraesCS5D01G013000	chr1D	189394622	189395745	1123	False	1646.0	1646	93.6230	840	1930	1	chr1D.!!$F3	1090
8	TraesCS5D01G013000	chr1D	18338937	18339442	505	False	525.0	525	86.6140	1461	1930	1	chr1D.!!$F1	469
9	TraesCS5D01G013000	chr2D	476878904	476880731	1827	False	2754.0	2754	94.1720	135	1930	1	chr2D.!!$F2	1795
10	TraesCS5D01G013000	chr2D	588794895	588796723	1828	True	2754.0	2754	94.1720	135	1930	1	chr2D.!!$R4	1795
11	TraesCS5D01G013000	chr2D	16904528	16906357	1829	False	2750.0	2750	94.1180	135	1930	1	chr2D.!!$F1	1795
12	TraesCS5D01G013000	chr2D	142521428	142523244	1816	True	2628.0	2628	92.9650	135	1943	1	chr2D.!!$R2	1808
13	TraesCS5D01G013000	chr2D	393211489	393213289	1800	True	2545.0	2545	92.3790	135	1930	1	chr2D.!!$R3	1795
14	TraesCS5D01G013000	chr3D	524198638	524200417	1779	False	2686.0	2686	94.2330	135	1881	1	chr3D.!!$F2	1746
15	TraesCS5D01G013000	chr3D	8302742	8304073	1331	True	1938.0	1938	93.3530	631	1930	1	chr3D.!!$R1	1299
16	TraesCS5D01G013000	chr3D	358505624	358506836	1212	False	1812.0	1812	93.7350	414	1624	1	chr3D.!!$F1	1210
17	TraesCS5D01G013000	chr4D	484447678	484449560	1882	False	2569.0	2569	91.7500	1	1835	1	chr4D.!!$F1	1834
18	TraesCS5D01G013000	chr7D	585451820	585453558	1738	False	2512.0	2512	93.1390	135	1835	1	chr7D.!!$F3	1700
19	TraesCS5D01G013000	chr5A	2873934	2874464	530	True	704.0	704	90.7750	1939	2469	1	chr5A.!!$R1	530
20	TraesCS5D01G013000	chr5A	77080245	77080752	507	True	538.0	538	87.0330	1461	1930	1	chr5A.!!$R3	469
21	TraesCS5D01G013000	chrUn	65432508	65433016	508	False	630.0	630	88.9940	1939	2459	1	chrUn.!!$F1	520

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
382	418	0.035458	CGTCTTCCTCAACCTTGGCT	59.965	55.0	0.0	0.0	0.0	4.75	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
2020	2570	0.40404	AATTCGGTGGAAGGCTGGAA	59.596	50.0	0.0	0.0	35.19	3.53	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
243	279	3.717294	GCCACCATGACCGACCCT	61.717	66.667	0.00	0.00	0.00	4.34
253	289	1.535444	ACCGACCCTGTCCACATGA	60.535	57.895	0.00	0.00	0.00	3.07
381	417	0.955919	CCGTCTTCCTCAACCTTGGC	60.956	60.000	0.00	0.00	0.00	4.52
382	418	0.035458	CGTCTTCCTCAACCTTGGCT	59.965	55.000	0.00	0.00	0.00	4.75
485	741	2.319844	CTCTTGCCTTTCCCCTGTTTT	58.680	47.619	0.00	0.00	0.00	2.43
675	932	3.790437	CCTCTCCATGCCACGCCT	61.790	66.667	0.00	0.00	0.00	5.52
1115	1375	4.643387	GGCGGTGTCACCTGGCTT	62.643	66.667	23.58	0.00	35.66	4.35
1250	1521	6.642733	ATATATCGATGGAGGGGTGATTTT	57.357	37.500	8.54	0.00	0.00	1.82
1772	2189	7.119846	AGAGTGAAGAGAAAAATAAACCGATGG	59.880	37.037	0.00	0.00	0.00	3.51
1773	2190	6.940298	AGTGAAGAGAAAAATAAACCGATGGA	59.060	34.615	0.00	0.00	0.00	3.41
1774	2191	7.611855	AGTGAAGAGAAAAATAAACCGATGGAT	59.388	33.333	0.00	0.00	0.00	3.41
1775	2192	7.910683	GTGAAGAGAAAAATAAACCGATGGATC	59.089	37.037	0.00	0.00	0.00	3.36
1784	2201	2.842462	CGATGGATCGGGGTGGGA	60.842	66.667	0.88	0.00	45.93	4.37
1785	2202	2.872388	CGATGGATCGGGGTGGGAG	61.872	68.421	0.88	0.00	45.93	4.30
1786	2203	2.448542	ATGGATCGGGGTGGGAGG	60.449	66.667	0.00	0.00	0.00	4.30
1787	2204	4.815973	TGGATCGGGGTGGGAGGG	62.816	72.222	0.00	0.00	0.00	4.30
1800	2217	4.348495	GAGGGGGTGGTGGGAGGA	62.348	72.222	0.00	0.00	0.00	3.71
1801	2218	4.354943	AGGGGGTGGTGGGAGGAG	62.355	72.222	0.00	0.00	0.00	3.69
1802	2219	4.348495	GGGGGTGGTGGGAGGAGA	62.348	72.222	0.00	0.00	0.00	3.71
1803	2220	2.689034	GGGGTGGTGGGAGGAGAG	60.689	72.222	0.00	0.00	0.00	3.20
1804	2221	2.450243	GGGTGGTGGGAGGAGAGA	59.550	66.667	0.00	0.00	0.00	3.10
1805	2222	1.990614	GGGTGGTGGGAGGAGAGAC	60.991	68.421	0.00	0.00	0.00	3.36
1806	2223	1.229209	GGTGGTGGGAGGAGAGACA	60.229	63.158	0.00	0.00	0.00	3.41
1807	2224	0.836400	GGTGGTGGGAGGAGAGACAA	60.836	60.000	0.00	0.00	0.00	3.18
1808	2225	1.056660	GTGGTGGGAGGAGAGACAAA	58.943	55.000	0.00	0.00	0.00	2.83
1809	2226	1.420138	GTGGTGGGAGGAGAGACAAAA	59.580	52.381	0.00	0.00	0.00	2.44
1810	2227	2.131854	TGGTGGGAGGAGAGACAAAAA	58.868	47.619	0.00	0.00	0.00	1.94
1831	2248	3.861276	AACCCAGCTAAAATAAACCGC	57.139	42.857	0.00	0.00	0.00	5.68
1872	2416	1.346722	GGTGGGAGGAGAGACGAAAAA	59.653	52.381	0.00	0.00	0.00	1.94
1936	2483	7.737869	TCGTCATTAGGAGTAGAGAGATTAGT	58.262	38.462	0.00	0.00	0.00	2.24
1937	2484	7.658167	TCGTCATTAGGAGTAGAGAGATTAGTG	59.342	40.741	0.00	0.00	0.00	2.74
1982	2529	1.230635	CGGCCCACACTATAGCATGC	61.231	60.000	10.51	10.51	0.00	4.06
2012	2560	3.028094	TGGGTCTACACTATCCAGTCC	57.972	52.381	0.00	0.00	30.46	3.85
2013	2561	2.313643	TGGGTCTACACTATCCAGTCCA	59.686	50.000	0.00	0.00	30.46	4.02
2014	2562	2.694109	GGGTCTACACTATCCAGTCCAC	59.306	54.545	0.00	0.00	30.46	4.02
2016	2564	3.627747	GGTCTACACTATCCAGTCCACCT	60.628	52.174	0.00	0.00	30.46	4.00
2020	2570	1.556911	CACTATCCAGTCCACCTTGCT	59.443	52.381	0.00	0.00	30.46	3.91
2041	2591	0.322456	CCAGCCTTCCACCGAATTCA	60.322	55.000	6.22	0.00	0.00	2.57
2133	2684	3.626680	CTTCGTCTTGCGCGGGAGA	62.627	63.158	8.83	3.06	41.07	3.71
2250	2812	2.443016	CGCCCCTAGCTCCTGACT	60.443	66.667	0.00	0.00	40.39	3.41
2337	2902	0.870307	CGTCGATAAGGGCCAAGACG	60.870	60.000	18.86	18.86	43.79	4.18
2398	2963	4.506802	GGAAGTTCTTGTCCAAGGTACCAT	60.507	45.833	15.94	0.00	38.88	3.55
2399	2964	4.021102	AGTTCTTGTCCAAGGTACCATG	57.979	45.455	15.94	12.93	38.88	3.66
2401	2966	1.004277	TCTTGTCCAAGGTACCATGCC	59.996	52.381	15.94	6.39	38.88	4.40
2402	2967	0.774276	TTGTCCAAGGTACCATGCCA	59.226	50.000	15.94	9.00	0.00	4.92
2431	2997	6.567050	CAATGTCTTATTTCCATTGGACTGG	58.433	40.000	4.45	0.00	40.95	4.00
2443	3009	2.579410	TGGACTGGAAAAAGGCTACC	57.421	50.000	0.00	0.00	0.00	3.18
2466	3032	5.357257	CGCTATGGTGTTCCTTAAGTATGT	58.643	41.667	0.97	0.00	34.23	2.29
2469	3035	7.116376	CGCTATGGTGTTCCTTAAGTATGTATG	59.884	40.741	0.97	0.00	34.23	2.39
2470	3036	8.148351	GCTATGGTGTTCCTTAAGTATGTATGA	58.852	37.037	0.97	0.00	34.23	2.15
2473	3039	9.920946	ATGGTGTTCCTTAAGTATGTATGAATT	57.079	29.630	0.97	0.00	34.23	2.17
2474	3040	9.173021	TGGTGTTCCTTAAGTATGTATGAATTG	57.827	33.333	0.97	0.00	34.23	2.32
2475	3041	9.174166	GGTGTTCCTTAAGTATGTATGAATTGT	57.826	33.333	0.97	0.00	0.00	2.71

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
51	52	1.461091	AACAGGAGAAGACGACCGCA	61.461	55.000	0.00	0.00	0.00	5.69
358	394	0.693049	AGGTTGAGGAAGACGGCAAT	59.307	50.000	0.00	0.00	0.00	3.56
381	417	3.853330	CGGCAATGTCGCGGTGAG	61.853	66.667	6.13	0.00	0.00	3.51
382	418	4.673298	ACGGCAATGTCGCGGTGA	62.673	61.111	7.32	0.00	43.02	4.02
485	741	0.894184	ACGAGAGCAAACGAGAGGGA	60.894	55.000	0.00	0.00	0.00	4.20
675	932	4.710695	CCGACGCGGTGTAGCACA	62.711	66.667	12.47	0.00	42.73	4.57
747	1004	4.927782	GCCAGGGTGTGTGTCGCA	62.928	66.667	0.00	0.00	0.00	5.10
797	1054	1.141019	GATAGGCGGCAACAGACGA	59.859	57.895	13.08	0.00	35.21	4.20
1115	1375	1.072489	TCGCATAAACACCTCCACCAA	59.928	47.619	0.00	0.00	0.00	3.67
1188	1451	4.227197	ACTGAGATCTCCGGGTTATGATT	58.773	43.478	20.03	0.00	0.00	2.57
1229	1500	4.599241	AGAAAATCACCCCTCCATCGATAT	59.401	41.667	0.00	0.00	0.00	1.63
1230	1501	3.973973	AGAAAATCACCCCTCCATCGATA	59.026	43.478	0.00	0.00	0.00	2.92
1231	1502	2.780010	AGAAAATCACCCCTCCATCGAT	59.220	45.455	0.00	0.00	0.00	3.59
1232	1503	2.196595	AGAAAATCACCCCTCCATCGA	58.803	47.619	0.00	0.00	0.00	3.59
1250	1521	9.581289	TTTTCTATGTTTTCCACCTATTGAAGA	57.419	29.630	0.00	0.00	0.00	2.87
1329	1600	3.385755	ACCCCATTTGCATAGAAATCAGC	59.614	43.478	0.00	0.00	0.00	4.26
1646	2063	9.710900	ATTCCTTTTATTGGTTCAATTTGTCTC	57.289	29.630	0.00	0.00	35.54	3.36
1783	2200	4.348495	TCCTCCCACCACCCCCTC	62.348	72.222	0.00	0.00	0.00	4.30
1784	2201	4.354943	CTCCTCCCACCACCCCCT	62.355	72.222	0.00	0.00	0.00	4.79
1785	2202	4.348495	TCTCCTCCCACCACCCCC	62.348	72.222	0.00	0.00	0.00	5.40
1786	2203	2.689034	CTCTCCTCCCACCACCCC	60.689	72.222	0.00	0.00	0.00	4.95
1787	2204	1.990614	GTCTCTCCTCCCACCACCC	60.991	68.421	0.00	0.00	0.00	4.61
1788	2205	0.836400	TTGTCTCTCCTCCCACCACC	60.836	60.000	0.00	0.00	0.00	4.61
1789	2206	1.056660	TTTGTCTCTCCTCCCACCAC	58.943	55.000	0.00	0.00	0.00	4.16
1790	2207	1.814429	TTTTGTCTCTCCTCCCACCA	58.186	50.000	0.00	0.00	0.00	4.17
1791	2208	2.951229	TTTTTGTCTCTCCTCCCACC	57.049	50.000	0.00	0.00	0.00	4.61
1808	2225	4.992319	GCGGTTTATTTTAGCTGGGTTTTT	59.008	37.500	0.00	0.00	0.00	1.94
1809	2226	4.562082	GCGGTTTATTTTAGCTGGGTTTT	58.438	39.130	0.00	0.00	0.00	2.43
1810	2227	3.366577	CGCGGTTTATTTTAGCTGGGTTT	60.367	43.478	0.00	0.00	0.00	3.27
1811	2228	2.162809	CGCGGTTTATTTTAGCTGGGTT	59.837	45.455	0.00	0.00	0.00	4.11
1812	2229	1.741145	CGCGGTTTATTTTAGCTGGGT	59.259	47.619	0.00	0.00	0.00	4.51
1813	2230	1.064952	CCGCGGTTTATTTTAGCTGGG	59.935	52.381	19.50	0.00	0.00	4.45
1814	2231	2.011222	TCCGCGGTTTATTTTAGCTGG	58.989	47.619	27.15	0.00	0.00	4.85
1815	2232	2.223180	GGTCCGCGGTTTATTTTAGCTG	60.223	50.000	27.15	0.00	0.00	4.24
1816	2233	2.011947	GGTCCGCGGTTTATTTTAGCT	58.988	47.619	27.15	0.00	0.00	3.32
1817	2234	1.738908	TGGTCCGCGGTTTATTTTAGC	59.261	47.619	27.15	13.31	0.00	3.09
1818	2235	2.353579	CCTGGTCCGCGGTTTATTTTAG	59.646	50.000	27.15	12.49	0.00	1.85
1819	2236	2.358015	CCTGGTCCGCGGTTTATTTTA	58.642	47.619	27.15	0.00	0.00	1.52
1820	2237	1.170442	CCTGGTCCGCGGTTTATTTT	58.830	50.000	27.15	0.00	0.00	1.82
1821	2238	0.678684	CCCTGGTCCGCGGTTTATTT	60.679	55.000	27.15	0.00	0.00	1.40
1822	2239	1.078001	CCCTGGTCCGCGGTTTATT	60.078	57.895	27.15	0.00	0.00	1.40
1823	2240	2.295602	ACCCTGGTCCGCGGTTTAT	61.296	57.895	27.15	2.42	0.00	1.40
1824	2241	2.924101	ACCCTGGTCCGCGGTTTA	60.924	61.111	27.15	11.33	0.00	2.01
1825	2242	4.636435	CACCCTGGTCCGCGGTTT	62.636	66.667	27.15	0.00	0.00	3.27
1872	2416	3.054166	GCGGTTTATTTTCGCTGGTTTT	58.946	40.909	0.00	0.00	45.16	2.43
1930	2477	3.067320	GCTGGAGCCCAAATTCACTAATC	59.933	47.826	0.00	0.00	30.80	1.75
1956	2503	0.544697	ATAGTGTGGGCCGGGTTTAG	59.455	55.000	2.18	0.00	0.00	1.85
1998	2546	2.500098	GCAAGGTGGACTGGATAGTGTA	59.500	50.000	0.00	0.00	37.25	2.90
2020	2570	0.404040	AATTCGGTGGAAGGCTGGAA	59.596	50.000	0.00	0.00	35.19	3.53
2250	2812	1.078918	CTCCTGCATGGCGAACAGA	60.079	57.895	4.04	0.00	33.10	3.41
2337	2902	3.650950	TTGAGGTGGGGAGCCAGC	61.651	66.667	0.00	0.00	38.33	4.85
2398	2963	4.382901	GGAAATAAGACATTGGCATTGGCA	60.383	41.667	16.87	9.11	43.71	4.92
2399	2964	4.122046	GGAAATAAGACATTGGCATTGGC	58.878	43.478	13.39	10.51	40.13	4.52
2401	2966	7.241663	CAATGGAAATAAGACATTGGCATTG	57.758	36.000	7.78	7.78	44.63	2.82
2443	3009	5.357257	ACATACTTAAGGAACACCATAGCG	58.643	41.667	7.53	0.00	0.00	4.26

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.