Multiple sequence alignment - TraesCS5D01G003200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G003200 chr5D 100.000 3786 0 0 1 3786 3069529 3073314 0.000000e+00 6992.0
1 TraesCS5D01G003200 chr5D 89.580 1382 95 25 972 2330 3012416 3013771 0.000000e+00 1709.0
2 TraesCS5D01G003200 chr5D 85.646 836 75 27 1530 2333 2797703 2798525 0.000000e+00 837.0
3 TraesCS5D01G003200 chr5D 83.054 537 49 19 938 1459 2797159 2797668 2.070000e-122 449.0
4 TraesCS5D01G003200 chr5D 89.503 181 16 1 698 875 2796807 2796987 3.810000e-55 226.0
5 TraesCS5D01G003200 chr5D 90.244 123 11 1 2653 2774 461071642 461071764 3.910000e-35 159.0
6 TraesCS5D01G003200 chr5B 86.167 2682 238 75 19 2638 2882496 2885106 0.000000e+00 2774.0
7 TraesCS5D01G003200 chr5B 86.212 1378 142 30 970 2330 2614438 2613092 0.000000e+00 1448.0
8 TraesCS5D01G003200 chr5B 82.210 1439 162 48 933 2330 2805420 2806805 0.000000e+00 1153.0
9 TraesCS5D01G003200 chr5B 91.429 140 12 0 3008 3147 2885572 2885711 3.860000e-45 193.0
10 TraesCS5D01G003200 chr5B 84.530 181 15 3 698 875 2804827 2804997 2.340000e-37 167.0
11 TraesCS5D01G003200 chr5A 85.188 1384 137 43 971 2330 1759616 1758277 0.000000e+00 1358.0
12 TraesCS5D01G003200 chr5A 82.986 1440 149 54 938 2330 1834996 1833606 0.000000e+00 1214.0
13 TraesCS5D01G003200 chr5A 89.754 771 60 12 1052 1821 1714393 1713641 0.000000e+00 968.0
14 TraesCS5D01G003200 chr5A 88.387 775 60 19 1784 2538 1713643 1712879 0.000000e+00 905.0
15 TraesCS5D01G003200 chr5A 84.725 491 44 19 495 979 1760375 1759910 2.660000e-126 462.0
16 TraesCS5D01G003200 chr5A 86.957 345 32 7 1989 2330 1803132 1802798 3.570000e-100 375.0
17 TraesCS5D01G003200 chr5A 90.106 283 28 0 1055 1337 1336371 1336653 5.970000e-98 368.0
18 TraesCS5D01G003200 chr5A 85.246 244 27 5 635 875 1803470 1803233 3.780000e-60 243.0
19 TraesCS5D01G003200 chr5A 88.764 178 17 1 701 875 1835608 1835431 8.240000e-52 215.0
20 TraesCS5D01G003200 chr5A 98.462 65 0 1 731 795 1714502 1714439 3.090000e-21 113.0
21 TraesCS5D01G003200 chr1A 80.134 599 105 12 19 611 536932447 536931857 5.810000e-118 435.0
22 TraesCS5D01G003200 chr1A 79.901 607 106 14 1 601 285979837 285980433 7.510000e-117 431.0
23 TraesCS5D01G003200 chr4B 79.866 596 113 6 7 599 64686100 64685509 2.700000e-116 429.0
24 TraesCS5D01G003200 chr1D 79.636 604 108 12 7 603 435528825 435529420 1.630000e-113 420.0
25 TraesCS5D01G003200 chr3D 79.693 586 109 9 21 602 562514037 562514616 7.570000e-112 414.0
26 TraesCS5D01G003200 chr3D 79.723 577 110 5 14 587 601003884 601004456 9.790000e-111 411.0
27 TraesCS5D01G003200 chr6A 78.974 604 115 11 1 599 149868141 149867545 5.890000e-108 401.0
28 TraesCS5D01G003200 chr3A 78.887 611 114 11 1 605 735598936 735599537 2.120000e-107 399.0
29 TraesCS5D01G003200 chr1B 75.504 694 138 21 2884 3557 565865970 565866651 1.020000e-80 311.0
30 TraesCS5D01G003200 chr1B 90.083 121 12 0 2653 2773 653831724 653831844 1.410000e-34 158.0
31 TraesCS5D01G003200 chr3B 90.756 119 11 0 2653 2771 308386828 308386946 3.910000e-35 159.0
32 TraesCS5D01G003200 chr3B 90.000 120 12 0 2653 2772 545185441 545185560 5.060000e-34 156.0
33 TraesCS5D01G003200 chr7B 90.000 120 12 0 2653 2772 383736248 383736129 5.060000e-34 156.0
34 TraesCS5D01G003200 chr7B 86.429 140 16 2 2635 2772 589467022 589467160 2.360000e-32 150.0
35 TraesCS5D01G003200 chr6D 89.344 122 13 0 2653 2774 450262713 450262834 1.820000e-33 154.0
36 TraesCS5D01G003200 chr2A 88.889 126 13 1 2654 2779 729162003 729162127 1.820000e-33 154.0
37 TraesCS5D01G003200 chr2A 87.692 130 16 0 2653 2782 606523805 606523676 6.550000e-33 152.0
38 TraesCS5D01G003200 chr4A 75.532 188 34 3 1574 1761 583163112 583162937 8.720000e-12 82.4
39 TraesCS5D01G003200 chr4A 85.897 78 8 3 1313 1388 583163371 583163295 3.130000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G003200 chr5D 3069529 3073314 3785 False 6992.0 6992 100.000000 1 3786 1 chr5D.!!$F2 3785
1 TraesCS5D01G003200 chr5D 3012416 3013771 1355 False 1709.0 1709 89.580000 972 2330 1 chr5D.!!$F1 1358
2 TraesCS5D01G003200 chr5D 2796807 2798525 1718 False 504.0 837 86.067667 698 2333 3 chr5D.!!$F4 1635
3 TraesCS5D01G003200 chr5B 2882496 2885711 3215 False 1483.5 2774 88.798000 19 3147 2 chr5B.!!$F2 3128
4 TraesCS5D01G003200 chr5B 2613092 2614438 1346 True 1448.0 1448 86.212000 970 2330 1 chr5B.!!$R1 1360
5 TraesCS5D01G003200 chr5B 2804827 2806805 1978 False 660.0 1153 83.370000 698 2330 2 chr5B.!!$F1 1632
6 TraesCS5D01G003200 chr5A 1758277 1760375 2098 True 910.0 1358 84.956500 495 2330 2 chr5A.!!$R2 1835
7 TraesCS5D01G003200 chr5A 1833606 1835608 2002 True 714.5 1214 85.875000 701 2330 2 chr5A.!!$R4 1629
8 TraesCS5D01G003200 chr5A 1712879 1714502 1623 True 662.0 968 92.201000 731 2538 3 chr5A.!!$R1 1807
9 TraesCS5D01G003200 chr5A 1802798 1803470 672 True 309.0 375 86.101500 635 2330 2 chr5A.!!$R3 1695
10 TraesCS5D01G003200 chr1A 536931857 536932447 590 True 435.0 435 80.134000 19 611 1 chr1A.!!$R1 592
11 TraesCS5D01G003200 chr1A 285979837 285980433 596 False 431.0 431 79.901000 1 601 1 chr1A.!!$F1 600
12 TraesCS5D01G003200 chr4B 64685509 64686100 591 True 429.0 429 79.866000 7 599 1 chr4B.!!$R1 592
13 TraesCS5D01G003200 chr1D 435528825 435529420 595 False 420.0 420 79.636000 7 603 1 chr1D.!!$F1 596
14 TraesCS5D01G003200 chr3D 562514037 562514616 579 False 414.0 414 79.693000 21 602 1 chr3D.!!$F1 581
15 TraesCS5D01G003200 chr3D 601003884 601004456 572 False 411.0 411 79.723000 14 587 1 chr3D.!!$F2 573
16 TraesCS5D01G003200 chr6A 149867545 149868141 596 True 401.0 401 78.974000 1 599 1 chr6A.!!$R1 598
17 TraesCS5D01G003200 chr3A 735598936 735599537 601 False 399.0 399 78.887000 1 605 1 chr3A.!!$F1 604
18 TraesCS5D01G003200 chr1B 565865970 565866651 681 False 311.0 311 75.504000 2884 3557 1 chr1B.!!$F1 673

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
993 1727 0.046397 AATAGCCTCCCAACCCCTCT 59.954 55.0 0.0 0.0 0.0 3.69 F
1042 1778 0.764890 TTCTCCAACACCAGACCAGG 59.235 55.0 0.0 0.0 0.0 4.45 F
1866 2789 0.895530 ATGACGAGAAGGAAGCGGAA 59.104 50.0 0.0 0.0 0.0 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2664 3608 0.036306 GAGGGACAGGCTTTTTCGGA 59.964 55.0 0.0 0.0 0.00 4.55 R
2665 3609 0.250727 TGAGGGACAGGCTTTTTCGG 60.251 55.0 0.0 0.0 0.00 4.30 R
3449 4621 0.041576 GCACCGAGTTCACGAAAACC 60.042 55.0 0.0 0.0 35.09 3.27 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 25 4.717629 CGTCGCTGGTTCGCCTCA 62.718 66.667 0.00 0.00 38.36 3.86
29 31 0.747255 GCTGGTTCGCCTCATCTCTA 59.253 55.000 0.00 0.00 38.36 2.43
42 44 4.211125 CTCATCTCTAGTGGCCTTAGTGA 58.789 47.826 16.55 16.55 0.00 3.41
50 52 1.220749 GGCCTTAGTGACATGGCGA 59.779 57.895 0.00 0.00 45.75 5.54
63 65 2.588877 GGCGACATGGTGGATCCG 60.589 66.667 7.39 0.00 39.52 4.18
119 122 5.096849 GCGTTTCTTTGTGTTTTGTTAGGA 58.903 37.500 0.00 0.00 0.00 2.94
134 137 3.540211 AGGATTTGTGTCCTGCTCG 57.460 52.632 0.00 0.00 46.76 5.03
173 176 2.304180 CGGCTCCCTGAAGATGGAATAT 59.696 50.000 0.00 0.00 0.00 1.28
186 189 2.201830 TGGAATATGGTTCTCCCCGTT 58.798 47.619 0.00 0.00 0.00 4.44
195 198 2.691252 CTCCCCGTTTAGCCCCCT 60.691 66.667 0.00 0.00 0.00 4.79
204 207 0.917333 TTTAGCCCCCTGTCCCGATT 60.917 55.000 0.00 0.00 0.00 3.34
211 214 1.671054 CCTGTCCCGATTGTGCGTT 60.671 57.895 0.00 0.00 0.00 4.84
241 244 1.070601 CGATGGGCATGTGGAGATGTA 59.929 52.381 0.00 0.00 0.00 2.29
252 257 3.960755 TGTGGAGATGTATCTGACGGATT 59.039 43.478 1.17 0.00 37.25 3.01
260 265 7.967908 AGATGTATCTGACGGATTTATCCTTT 58.032 34.615 1.17 0.00 39.16 3.11
262 267 6.288294 TGTATCTGACGGATTTATCCTTTGG 58.712 40.000 1.17 0.00 44.93 3.28
283 288 2.632377 GAATTTGCTCGGATCTGGTCA 58.368 47.619 0.62 0.00 0.00 4.02
284 289 2.029838 ATTTGCTCGGATCTGGTCAC 57.970 50.000 0.62 0.00 0.00 3.67
302 307 2.799978 TCACAGTTCGTCTACGTTCGTA 59.200 45.455 0.00 5.02 40.80 3.43
304 309 4.625311 TCACAGTTCGTCTACGTTCGTATA 59.375 41.667 5.55 0.00 40.80 1.47
316 321 5.320549 ACGTTCGTATATCTTCAGGTTGT 57.679 39.130 0.00 0.00 0.00 3.32
347 353 9.688091 TTCTGATCTACACTACTCTTCAATAGT 57.312 33.333 0.00 0.00 31.65 2.12
356 362 2.301870 ACTCTTCAATAGTGGCGGTTGA 59.698 45.455 0.00 0.00 0.00 3.18
379 386 1.219124 CTGGTGCGCTGTCCTATGT 59.781 57.895 9.73 0.00 0.00 2.29
400 407 1.134670 GGCCTTAGCATGACGACTTCT 60.135 52.381 0.00 0.00 42.56 2.85
401 408 2.622436 GCCTTAGCATGACGACTTCTT 58.378 47.619 0.00 0.00 39.53 2.52
418 425 8.189460 ACGACTTCTTGATTATCTACTGTAACC 58.811 37.037 0.00 0.00 0.00 2.85
419 426 7.376336 CGACTTCTTGATTATCTACTGTAACCG 59.624 40.741 0.00 0.00 0.00 4.44
427 434 9.027129 TGATTATCTACTGTAACCGATTTTTCG 57.973 33.333 0.00 0.00 0.00 3.46
439 446 1.940613 GATTTTTCGTAGCTCCGGCAT 59.059 47.619 0.00 0.00 41.70 4.40
444 451 1.035385 TCGTAGCTCCGGCATGAGAA 61.035 55.000 0.00 0.00 41.70 2.87
453 460 2.437359 GCATGAGAAGGGCGCTGT 60.437 61.111 7.64 0.00 0.00 4.40
491 498 2.408050 CTCGCTTCAGTGCTTGTAGTT 58.592 47.619 0.00 0.00 0.00 2.24
492 499 2.404215 TCGCTTCAGTGCTTGTAGTTC 58.596 47.619 0.00 0.00 0.00 3.01
497 504 3.192541 TCAGTGCTTGTAGTTCTTGCA 57.807 42.857 0.00 0.00 0.00 4.08
558 568 3.370978 CCTGATGTTCATTGTACCGTCAC 59.629 47.826 0.00 0.00 0.00 3.67
589 599 8.567285 AAGATGAATAGATTGGAAGTTTTCGT 57.433 30.769 0.00 0.00 0.00 3.85
591 601 9.319143 AGATGAATAGATTGGAAGTTTTCGTAG 57.681 33.333 0.00 0.00 0.00 3.51
633 643 5.243426 TCTGGTGTTTGAACTTTGCTAAC 57.757 39.130 0.00 0.00 0.00 2.34
675 687 4.599047 AATGATTTTCAGTTGCCGGAAA 57.401 36.364 5.05 0.00 33.74 3.13
676 688 3.641437 TGATTTTCAGTTGCCGGAAAG 57.359 42.857 5.05 0.00 36.38 2.62
677 689 2.955660 TGATTTTCAGTTGCCGGAAAGT 59.044 40.909 5.05 0.00 36.38 2.66
696 708 7.466996 CGGAAAGTAGTAGTATGTAGGTGACAG 60.467 44.444 0.00 0.00 42.79 3.51
703 716 5.161943 AGTATGTAGGTGACAGAAAACCC 57.838 43.478 0.00 0.00 42.79 4.11
820 839 0.106519 GTCCCCCATTGACATCCAGG 60.107 60.000 0.00 0.00 32.91 4.45
856 883 9.577222 ACTACTAGTATTAGCTCCTAAGGAAAG 57.423 37.037 2.33 0.00 29.02 2.62
859 886 8.066247 ACTAGTATTAGCTCCTAAGGAAAGGAA 58.934 37.037 0.00 0.00 45.08 3.36
860 887 7.368198 AGTATTAGCTCCTAAGGAAAGGAAG 57.632 40.000 0.00 0.00 45.08 3.46
875 902 6.903534 AGGAAAGGAAGAGATGGAATGTACTA 59.096 38.462 0.00 0.00 0.00 1.82
876 903 7.070571 AGGAAAGGAAGAGATGGAATGTACTAG 59.929 40.741 0.00 0.00 0.00 2.57
879 913 9.440761 AAAGGAAGAGATGGAATGTACTAGTAT 57.559 33.333 5.75 0.00 0.00 2.12
891 1301 8.358148 GGAATGTACTAGTATTAGCTGCTAACA 58.642 37.037 23.20 15.13 0.00 2.41
978 1709 2.238898 CCCCCTTCCCGCCTATAAATAG 59.761 54.545 0.00 0.00 0.00 1.73
991 1725 2.296943 TAAATAGCCTCCCAACCCCT 57.703 50.000 0.00 0.00 0.00 4.79
992 1726 0.927029 AAATAGCCTCCCAACCCCTC 59.073 55.000 0.00 0.00 0.00 4.30
993 1727 0.046397 AATAGCCTCCCAACCCCTCT 59.954 55.000 0.00 0.00 0.00 3.69
1042 1778 0.764890 TTCTCCAACACCAGACCAGG 59.235 55.000 0.00 0.00 0.00 4.45
1094 1850 2.293318 ATCTCCACCTTCGGCTGCA 61.293 57.895 0.50 0.00 0.00 4.41
1166 1930 3.444805 GCTGGACGTCGCTCCTCT 61.445 66.667 9.92 0.00 0.00 3.69
1349 2131 4.504916 CCACGAGAGCCTCAGCCG 62.505 72.222 0.00 0.00 41.25 5.52
1506 2297 2.383855 CAAGACGAAGAGGAGGAGGAT 58.616 52.381 0.00 0.00 0.00 3.24
1510 2301 1.286553 ACGAAGAGGAGGAGGATGAGT 59.713 52.381 0.00 0.00 0.00 3.41
1511 2302 2.291930 ACGAAGAGGAGGAGGATGAGTT 60.292 50.000 0.00 0.00 0.00 3.01
1514 2305 1.648568 AGAGGAGGAGGATGAGTTGGA 59.351 52.381 0.00 0.00 0.00 3.53
1517 2308 1.127343 GAGGAGGATGAGTTGGAGGG 58.873 60.000 0.00 0.00 0.00 4.30
1520 2311 1.306141 AGGATGAGTTGGAGGGCGA 60.306 57.895 0.00 0.00 0.00 5.54
1523 2314 1.306141 ATGAGTTGGAGGGCGAGGA 60.306 57.895 0.00 0.00 0.00 3.71
1527 2318 2.364317 TTGGAGGGCGAGGAGGAG 60.364 66.667 0.00 0.00 0.00 3.69
1528 2319 2.931180 TTGGAGGGCGAGGAGGAGA 61.931 63.158 0.00 0.00 0.00 3.71
1536 2342 1.319614 GCGAGGAGGAGAAGCTGACT 61.320 60.000 0.00 0.00 0.00 3.41
1770 2576 1.153667 CGACTGCTCCTCTGCTTCC 60.154 63.158 0.00 0.00 0.00 3.46
1773 2579 2.999648 TGCTCCTCTGCTTCCGCT 61.000 61.111 0.00 0.00 36.97 5.52
1788 2594 4.800166 GCTTCTGTTCGCGAACAC 57.200 55.556 42.01 30.64 45.42 3.32
1862 2785 2.606725 CACATCATGACGAGAAGGAAGC 59.393 50.000 0.00 0.00 0.00 3.86
1866 2789 0.895530 ATGACGAGAAGGAAGCGGAA 59.104 50.000 0.00 0.00 0.00 4.30
2007 2936 3.292936 ACCGACGACCTGAACGCT 61.293 61.111 0.00 0.00 0.00 5.07
2371 3309 9.042008 ACGTACCATTGCTAGTAATTAATCAAG 57.958 33.333 2.97 0.00 0.00 3.02
2477 3419 4.213564 ACCTTGCTCTTGTCCTATCAAG 57.786 45.455 0.00 0.00 44.08 3.02
2508 3451 4.160439 TCAATCTGTTTACTGCTCCGATCT 59.840 41.667 0.00 0.00 0.00 2.75
2541 3484 2.052047 CTCCACTCCGGTTGGTTGGT 62.052 60.000 20.14 0.48 39.31 3.67
2580 3524 1.202976 AGCTGGTTCTGTCTTGCCAAT 60.203 47.619 0.00 0.00 0.00 3.16
2585 3529 4.922206 TGGTTCTGTCTTGCCAATAATCT 58.078 39.130 0.00 0.00 0.00 2.40
2638 3582 3.304928 CCAAATTAATCATCGCAGCTCCC 60.305 47.826 0.00 0.00 0.00 4.30
2639 3583 2.936919 ATTAATCATCGCAGCTCCCA 57.063 45.000 0.00 0.00 0.00 4.37
2640 3584 1.953559 TTAATCATCGCAGCTCCCAC 58.046 50.000 0.00 0.00 0.00 4.61
2641 3585 1.123077 TAATCATCGCAGCTCCCACT 58.877 50.000 0.00 0.00 0.00 4.00
2642 3586 1.123077 AATCATCGCAGCTCCCACTA 58.877 50.000 0.00 0.00 0.00 2.74
2643 3587 1.346062 ATCATCGCAGCTCCCACTAT 58.654 50.000 0.00 0.00 0.00 2.12
2646 3590 1.341209 CATCGCAGCTCCCACTATACA 59.659 52.381 0.00 0.00 0.00 2.29
2647 3591 1.480789 TCGCAGCTCCCACTATACAA 58.519 50.000 0.00 0.00 0.00 2.41
2648 3592 1.136305 TCGCAGCTCCCACTATACAAC 59.864 52.381 0.00 0.00 0.00 3.32
2649 3593 1.137086 CGCAGCTCCCACTATACAACT 59.863 52.381 0.00 0.00 0.00 3.16
2650 3594 2.418746 CGCAGCTCCCACTATACAACTT 60.419 50.000 0.00 0.00 0.00 2.66
2651 3595 2.939103 GCAGCTCCCACTATACAACTTG 59.061 50.000 0.00 0.00 0.00 3.16
2652 3596 3.535561 CAGCTCCCACTATACAACTTGG 58.464 50.000 0.00 0.00 0.00 3.61
2653 3597 3.055094 CAGCTCCCACTATACAACTTGGT 60.055 47.826 0.00 0.00 0.00 3.67
2654 3598 4.161565 CAGCTCCCACTATACAACTTGGTA 59.838 45.833 0.00 0.00 0.00 3.25
2655 3599 4.161754 AGCTCCCACTATACAACTTGGTAC 59.838 45.833 0.00 0.00 0.00 3.34
2656 3600 4.682589 GCTCCCACTATACAACTTGGTACC 60.683 50.000 4.43 4.43 0.00 3.34
2657 3601 3.776417 TCCCACTATACAACTTGGTACCC 59.224 47.826 10.07 0.00 0.00 3.69
2658 3602 3.118149 CCCACTATACAACTTGGTACCCC 60.118 52.174 10.07 0.00 0.00 4.95
2659 3603 3.118149 CCACTATACAACTTGGTACCCCC 60.118 52.174 10.07 0.00 0.00 5.40
2660 3604 3.778629 CACTATACAACTTGGTACCCCCT 59.221 47.826 10.07 0.00 0.00 4.79
2661 3605 4.035814 ACTATACAACTTGGTACCCCCTC 58.964 47.826 10.07 0.00 0.00 4.30
2662 3606 1.660242 TACAACTTGGTACCCCCTCC 58.340 55.000 10.07 0.00 0.00 4.30
2663 3607 1.298667 CAACTTGGTACCCCCTCCG 59.701 63.158 10.07 0.00 0.00 4.63
2664 3608 1.151965 AACTTGGTACCCCCTCCGT 60.152 57.895 10.07 0.00 0.00 4.69
2665 3609 1.196766 AACTTGGTACCCCCTCCGTC 61.197 60.000 10.07 0.00 0.00 4.79
2666 3610 2.284847 TTGGTACCCCCTCCGTCC 60.285 66.667 10.07 0.00 0.00 4.79
2667 3611 4.764771 TGGTACCCCCTCCGTCCG 62.765 72.222 10.07 0.00 0.00 4.79
2668 3612 4.447342 GGTACCCCCTCCGTCCGA 62.447 72.222 0.00 0.00 0.00 4.55
2669 3613 2.362889 GTACCCCCTCCGTCCGAA 60.363 66.667 0.00 0.00 0.00 4.30
2670 3614 1.984026 GTACCCCCTCCGTCCGAAA 60.984 63.158 0.00 0.00 0.00 3.46
2671 3615 1.229145 TACCCCCTCCGTCCGAAAA 60.229 57.895 0.00 0.00 0.00 2.29
2672 3616 0.835543 TACCCCCTCCGTCCGAAAAA 60.836 55.000 0.00 0.00 0.00 1.94
2673 3617 1.376812 CCCCCTCCGTCCGAAAAAG 60.377 63.158 0.00 0.00 0.00 2.27
2674 3618 2.038837 CCCCTCCGTCCGAAAAAGC 61.039 63.158 0.00 0.00 0.00 3.51
2675 3619 2.038837 CCCTCCGTCCGAAAAAGCC 61.039 63.158 0.00 0.00 0.00 4.35
2676 3620 1.003718 CCTCCGTCCGAAAAAGCCT 60.004 57.895 0.00 0.00 0.00 4.58
2677 3621 1.298859 CCTCCGTCCGAAAAAGCCTG 61.299 60.000 0.00 0.00 0.00 4.85
2678 3622 0.602905 CTCCGTCCGAAAAAGCCTGT 60.603 55.000 0.00 0.00 0.00 4.00
2679 3623 0.601841 TCCGTCCGAAAAAGCCTGTC 60.602 55.000 0.00 0.00 0.00 3.51
2680 3624 1.574702 CCGTCCGAAAAAGCCTGTCC 61.575 60.000 0.00 0.00 0.00 4.02
2681 3625 1.574702 CGTCCGAAAAAGCCTGTCCC 61.575 60.000 0.00 0.00 0.00 4.46
2682 3626 0.250770 GTCCGAAAAAGCCTGTCCCT 60.251 55.000 0.00 0.00 0.00 4.20
2683 3627 0.036306 TCCGAAAAAGCCTGTCCCTC 59.964 55.000 0.00 0.00 0.00 4.30
2684 3628 0.250727 CCGAAAAAGCCTGTCCCTCA 60.251 55.000 0.00 0.00 0.00 3.86
2685 3629 1.604604 CGAAAAAGCCTGTCCCTCAA 58.395 50.000 0.00 0.00 0.00 3.02
2686 3630 1.953686 CGAAAAAGCCTGTCCCTCAAA 59.046 47.619 0.00 0.00 0.00 2.69
2687 3631 2.558359 CGAAAAAGCCTGTCCCTCAAAT 59.442 45.455 0.00 0.00 0.00 2.32
2688 3632 3.612479 CGAAAAAGCCTGTCCCTCAAATG 60.612 47.826 0.00 0.00 0.00 2.32
2689 3633 1.928868 AAAGCCTGTCCCTCAAATGG 58.071 50.000 0.00 0.00 0.00 3.16
2690 3634 1.075601 AAGCCTGTCCCTCAAATGGA 58.924 50.000 0.00 0.00 0.00 3.41
2691 3635 1.302907 AGCCTGTCCCTCAAATGGAT 58.697 50.000 0.00 0.00 33.65 3.41
2692 3636 1.064166 AGCCTGTCCCTCAAATGGATG 60.064 52.381 0.00 0.00 33.65 3.51
2693 3637 1.341383 GCCTGTCCCTCAAATGGATGT 60.341 52.381 0.00 0.00 33.65 3.06
2694 3638 2.092429 GCCTGTCCCTCAAATGGATGTA 60.092 50.000 0.00 0.00 33.65 2.29
2695 3639 3.435601 GCCTGTCCCTCAAATGGATGTAT 60.436 47.826 0.00 0.00 33.65 2.29
2696 3640 4.392940 CCTGTCCCTCAAATGGATGTATC 58.607 47.826 0.00 0.00 33.65 2.24
2697 3641 4.103785 CCTGTCCCTCAAATGGATGTATCT 59.896 45.833 0.00 0.00 33.65 1.98
2698 3642 5.307976 CCTGTCCCTCAAATGGATGTATCTA 59.692 44.000 0.00 0.00 33.65 1.98
2699 3643 6.425210 TGTCCCTCAAATGGATGTATCTAG 57.575 41.667 0.00 0.00 33.65 2.43
2700 3644 5.221722 TGTCCCTCAAATGGATGTATCTAGC 60.222 44.000 0.00 0.00 33.65 3.42
2701 3645 4.907269 TCCCTCAAATGGATGTATCTAGCA 59.093 41.667 0.00 0.00 0.00 3.49
2702 3646 4.999950 CCCTCAAATGGATGTATCTAGCAC 59.000 45.833 0.00 0.00 0.00 4.40
2703 3647 4.999950 CCTCAAATGGATGTATCTAGCACC 59.000 45.833 0.00 0.00 0.00 5.01
2704 3648 5.455183 CCTCAAATGGATGTATCTAGCACCA 60.455 44.000 0.00 0.00 0.00 4.17
2705 3649 6.000246 TCAAATGGATGTATCTAGCACCAA 58.000 37.500 0.00 0.00 0.00 3.67
2706 3650 6.057533 TCAAATGGATGTATCTAGCACCAAG 58.942 40.000 0.00 0.00 0.00 3.61
2707 3651 5.636903 AATGGATGTATCTAGCACCAAGT 57.363 39.130 0.00 0.00 0.00 3.16
2708 3652 5.636903 ATGGATGTATCTAGCACCAAGTT 57.363 39.130 0.00 0.00 0.00 2.66
2709 3653 6.747414 ATGGATGTATCTAGCACCAAGTTA 57.253 37.500 0.00 0.00 0.00 2.24
2710 3654 6.161855 TGGATGTATCTAGCACCAAGTTAG 57.838 41.667 0.00 0.00 32.79 2.34
2711 3655 5.661312 TGGATGTATCTAGCACCAAGTTAGT 59.339 40.000 0.00 0.00 33.25 2.24
2712 3656 5.986135 GGATGTATCTAGCACCAAGTTAGTG 59.014 44.000 0.00 0.00 38.30 2.74
2736 3680 5.852282 TGGATACATTCATTCGAGAGACA 57.148 39.130 0.00 0.00 46.17 3.41
2737 3681 6.220726 TGGATACATTCATTCGAGAGACAA 57.779 37.500 0.00 0.00 46.17 3.18
2738 3682 6.276091 TGGATACATTCATTCGAGAGACAAG 58.724 40.000 0.00 0.00 46.17 3.16
2739 3683 6.127338 TGGATACATTCATTCGAGAGACAAGT 60.127 38.462 0.00 0.00 46.17 3.16
2740 3684 6.758886 GGATACATTCATTCGAGAGACAAGTT 59.241 38.462 0.00 0.00 41.84 2.66
2741 3685 7.278868 GGATACATTCATTCGAGAGACAAGTTT 59.721 37.037 0.00 0.00 41.84 2.66
2742 3686 6.233430 ACATTCATTCGAGAGACAAGTTTG 57.767 37.500 0.00 0.00 41.84 2.93
2743 3687 5.180117 ACATTCATTCGAGAGACAAGTTTGG 59.820 40.000 0.00 0.00 41.84 3.28
2744 3688 3.664107 TCATTCGAGAGACAAGTTTGGG 58.336 45.455 0.00 0.00 41.84 4.12
2745 3689 3.323691 TCATTCGAGAGACAAGTTTGGGA 59.676 43.478 0.00 0.00 41.84 4.37
2746 3690 2.814280 TCGAGAGACAAGTTTGGGAC 57.186 50.000 0.00 0.00 33.31 4.46
2747 3691 2.036387 TCGAGAGACAAGTTTGGGACA 58.964 47.619 0.00 0.00 33.31 4.02
2748 3692 2.432874 TCGAGAGACAAGTTTGGGACAA 59.567 45.455 0.00 0.00 38.70 3.18
2749 3693 3.492656 TCGAGAGACAAGTTTGGGACAAG 60.493 47.826 0.00 0.00 38.70 3.16
2750 3694 5.954223 TCGAGAGACAAGTTTGGGACAAGT 61.954 45.833 0.00 0.00 38.70 3.16
2751 3695 7.367741 TCGAGAGACAAGTTTGGGACAAGTT 62.368 44.000 0.00 0.00 38.70 2.66
2752 3696 8.749609 TCGAGAGACAAGTTTGGGACAAGTTT 62.750 42.308 0.00 0.00 38.70 2.66
2809 3753 8.450578 AAGCTATGACAATTAATTCGGATCAA 57.549 30.769 0.00 0.00 0.00 2.57
2812 3756 7.805071 GCTATGACAATTAATTCGGATCAAAGG 59.195 37.037 0.00 0.00 0.00 3.11
2813 3757 6.449635 TGACAATTAATTCGGATCAAAGGG 57.550 37.500 0.00 0.00 0.00 3.95
2828 3772 3.194968 TCAAAGGGAGTAGGTGATTCGAC 59.805 47.826 0.00 0.00 0.00 4.20
2830 3774 3.103080 AGGGAGTAGGTGATTCGACTT 57.897 47.619 0.00 0.00 0.00 3.01
2834 3778 6.005198 AGGGAGTAGGTGATTCGACTTATAG 58.995 44.000 0.00 0.00 0.00 1.31
2926 3958 5.232463 AGCAGGCAATGAACTTAATTTGTG 58.768 37.500 0.00 0.00 0.00 3.33
2942 3975 2.232756 TGTGCAAGTAGAAGCGTTGA 57.767 45.000 0.00 0.00 0.00 3.18
2958 3991 5.497474 AGCGTTGAGGTTAAGGTCAATAAT 58.503 37.500 3.38 0.00 35.22 1.28
2983 4016 1.353091 GGGACACTTCTTCCAGACCT 58.647 55.000 0.00 0.00 34.45 3.85
2988 4021 4.081917 GGACACTTCTTCCAGACCTAGAAG 60.082 50.000 8.98 8.98 46.49 2.85
2995 4028 3.776731 TCCAGACCTAGAAGGGATTGA 57.223 47.619 0.00 0.00 40.58 2.57
3000 4033 4.467795 CAGACCTAGAAGGGATTGAGTCAA 59.532 45.833 8.27 8.27 40.58 3.18
3005 4038 1.002857 AAGGGATTGAGTCAAGGGGG 58.997 55.000 11.91 0.00 0.00 5.40
3037 4196 4.988540 CCCGCGTTCTCTTCAATATTATCA 59.011 41.667 4.92 0.00 0.00 2.15
3057 4216 6.814506 ATCAAAGATATGCTGGCAATACTC 57.185 37.500 0.00 0.00 0.00 2.59
3104 4263 2.556189 AGATCGGAGGATTGATCTCACG 59.444 50.000 0.00 0.00 46.32 4.35
3133 4292 4.408921 TGAATGGGTGAGTTTCGATCCTAT 59.591 41.667 0.00 0.00 0.00 2.57
3140 4299 6.535508 GGGTGAGTTTCGATCCTATAATATGC 59.464 42.308 0.00 0.00 0.00 3.14
3150 4309 7.030165 CGATCCTATAATATGCGGATGATACC 58.970 42.308 0.00 0.00 36.44 2.73
3154 4313 9.374711 TCCTATAATATGCGGATGATACCATTA 57.625 33.333 0.00 0.00 32.09 1.90
3182 4341 8.579850 TTTATGGAATATGACATGGATAAGGC 57.420 34.615 0.00 0.00 0.00 4.35
3184 4343 4.285775 TGGAATATGACATGGATAAGGCGA 59.714 41.667 0.00 0.00 0.00 5.54
3196 4355 8.893727 ACATGGATAAGGCGATAAATATAAAGC 58.106 33.333 0.00 0.00 0.00 3.51
3208 4367 8.559536 CGATAAATATAAAGCTGGTCATGTGTT 58.440 33.333 0.00 0.00 0.00 3.32
3223 4382 6.646240 GGTCATGTGTTTGTTTGAGCAATTAT 59.354 34.615 0.00 0.00 36.77 1.28
3225 4384 7.596248 GTCATGTGTTTGTTTGAGCAATTATCT 59.404 33.333 0.00 0.00 0.00 1.98
3226 4385 7.595875 TCATGTGTTTGTTTGAGCAATTATCTG 59.404 33.333 0.00 0.00 0.00 2.90
3231 4390 6.899393 TTGTTTGAGCAATTATCTGGTCTT 57.101 33.333 4.63 0.00 42.93 3.01
3234 4393 7.816640 TGTTTGAGCAATTATCTGGTCTTAAC 58.183 34.615 4.63 8.54 42.93 2.01
3240 4399 8.757982 AGCAATTATCTGGTCTTAACATCAAT 57.242 30.769 0.00 0.00 0.00 2.57
3249 4408 7.286546 TCTGGTCTTAACATCAATTTCCACAAA 59.713 33.333 0.00 0.00 0.00 2.83
3252 4411 8.141268 GGTCTTAACATCAATTTCCACAAAAGA 58.859 33.333 0.00 0.00 0.00 2.52
3256 4415 6.966534 ACATCAATTTCCACAAAAGAGAGT 57.033 33.333 0.00 0.00 0.00 3.24
3281 4442 0.941542 TTTTGGACGCGTCAAAGAGG 59.058 50.000 37.26 0.00 35.81 3.69
3286 4447 1.404315 GGACGCGTCAAAGAGGAAGAT 60.404 52.381 37.26 0.00 0.00 2.40
3318 4479 4.405680 TCGACATCTATTTGGGTGTGAGAT 59.594 41.667 0.00 0.00 0.00 2.75
3322 4483 4.235079 TCTATTTGGGTGTGAGATTGGG 57.765 45.455 0.00 0.00 0.00 4.12
3325 4486 0.036164 TTGGGTGTGAGATTGGGTCG 59.964 55.000 0.00 0.00 0.00 4.79
3329 4490 0.741221 GTGTGAGATTGGGTCGCTCC 60.741 60.000 0.00 0.00 0.00 4.70
3343 4504 2.357009 GTCGCTCCCGTTCAGTTATCTA 59.643 50.000 0.00 0.00 35.54 1.98
3349 4510 4.553678 TCCCGTTCAGTTATCTAGGGATT 58.446 43.478 0.00 0.00 41.11 3.01
3352 4513 4.344102 CCGTTCAGTTATCTAGGGATTCCA 59.656 45.833 4.80 0.00 33.71 3.53
3353 4514 5.163343 CCGTTCAGTTATCTAGGGATTCCAA 60.163 44.000 4.80 0.00 33.71 3.53
3369 4541 2.656002 TCCAATCCACCACGAACAAAA 58.344 42.857 0.00 0.00 0.00 2.44
3372 4544 3.181480 CCAATCCACCACGAACAAAAAGT 60.181 43.478 0.00 0.00 0.00 2.66
3374 4546 2.712709 TCCACCACGAACAAAAAGTGA 58.287 42.857 0.00 0.00 38.06 3.41
3380 4552 5.347364 CACCACGAACAAAAAGTGAAAATGT 59.653 36.000 0.00 0.00 38.06 2.71
3384 4556 8.055402 CCACGAACAAAAAGTGAAAATGTATTG 58.945 33.333 0.00 0.00 38.06 1.90
3421 4593 2.620585 AGAAGTTGAGCTGTTGGAAAGC 59.379 45.455 0.00 0.00 41.15 3.51
3437 4609 5.007682 TGGAAAGCCAAACTTATGTCCTAC 58.992 41.667 0.00 0.00 42.49 3.18
3438 4610 4.094442 GGAAAGCCAAACTTATGTCCTACG 59.906 45.833 0.00 0.00 37.75 3.51
3454 4626 3.690475 CTACGGAGGTAGGTTGGTTTT 57.310 47.619 0.00 0.00 42.02 2.43
3455 4627 2.556144 ACGGAGGTAGGTTGGTTTTC 57.444 50.000 0.00 0.00 0.00 2.29
3465 4637 1.003223 GGTTGGTTTTCGTGAACTCGG 60.003 52.381 4.26 0.00 0.00 4.63
3469 4641 0.935196 GTTTTCGTGAACTCGGTGCT 59.065 50.000 0.00 0.00 0.00 4.40
3473 4645 0.386352 TCGTGAACTCGGTGCTTACG 60.386 55.000 0.00 0.00 0.00 3.18
3474 4646 0.386352 CGTGAACTCGGTGCTTACGA 60.386 55.000 0.00 0.00 38.79 3.43
3475 4647 1.774639 GTGAACTCGGTGCTTACGAA 58.225 50.000 0.00 0.00 40.16 3.85
3476 4648 2.334838 GTGAACTCGGTGCTTACGAAT 58.665 47.619 0.00 0.00 40.16 3.34
3477 4649 2.344741 GTGAACTCGGTGCTTACGAATC 59.655 50.000 0.00 0.00 40.16 2.52
3478 4650 2.230508 TGAACTCGGTGCTTACGAATCT 59.769 45.455 0.00 0.00 40.16 2.40
3479 4651 3.441222 TGAACTCGGTGCTTACGAATCTA 59.559 43.478 0.00 0.00 40.16 1.98
3480 4652 3.417690 ACTCGGTGCTTACGAATCTAC 57.582 47.619 0.00 0.00 40.16 2.59
3481 4653 2.098770 ACTCGGTGCTTACGAATCTACC 59.901 50.000 0.00 0.00 40.16 3.18
3482 4654 2.358267 CTCGGTGCTTACGAATCTACCT 59.642 50.000 0.00 0.00 40.16 3.08
3483 4655 3.544684 TCGGTGCTTACGAATCTACCTA 58.455 45.455 0.00 0.00 37.42 3.08
3484 4656 4.139786 TCGGTGCTTACGAATCTACCTAT 58.860 43.478 0.00 0.00 37.42 2.57
3485 4657 4.023450 TCGGTGCTTACGAATCTACCTATG 60.023 45.833 0.00 0.00 37.42 2.23
3487 4659 4.982916 GGTGCTTACGAATCTACCTATGTG 59.017 45.833 0.00 0.00 0.00 3.21
3488 4660 4.444720 GTGCTTACGAATCTACCTATGTGC 59.555 45.833 0.00 0.00 0.00 4.57
3489 4661 4.098807 TGCTTACGAATCTACCTATGTGCA 59.901 41.667 0.00 0.00 0.00 4.57
3490 4662 5.221441 TGCTTACGAATCTACCTATGTGCAT 60.221 40.000 0.00 0.00 0.00 3.96
3491 4663 5.119279 GCTTACGAATCTACCTATGTGCATG 59.881 44.000 0.00 0.00 0.00 4.06
3492 4664 3.393800 ACGAATCTACCTATGTGCATGC 58.606 45.455 11.82 11.82 0.00 4.06
3493 4665 3.070159 ACGAATCTACCTATGTGCATGCT 59.930 43.478 20.33 0.40 0.00 3.79
3497 4671 6.458751 CGAATCTACCTATGTGCATGCTTTTT 60.459 38.462 20.33 3.81 0.00 1.94
3519 4693 5.925506 TTTAGAACTACATGTCGGGATCA 57.074 39.130 0.00 0.00 0.00 2.92
3520 4694 5.515797 TTAGAACTACATGTCGGGATCAG 57.484 43.478 0.00 0.00 0.00 2.90
3531 4705 2.945668 GTCGGGATCAGGAAAAGATTGG 59.054 50.000 0.00 0.00 0.00 3.16
3536 4710 5.127682 CGGGATCAGGAAAAGATTGGATTTT 59.872 40.000 0.00 0.00 32.68 1.82
3538 4712 6.820152 GGGATCAGGAAAAGATTGGATTTTTG 59.180 38.462 0.00 0.00 30.22 2.44
3540 4714 7.332678 GGATCAGGAAAAGATTGGATTTTTGTG 59.667 37.037 0.00 0.00 30.22 3.33
3545 4719 7.236225 AGGAAAAGATTGGATTTTTGTGGATCT 59.764 33.333 0.00 0.00 30.22 2.75
3546 4720 7.879677 GGAAAAGATTGGATTTTTGTGGATCTT 59.120 33.333 0.00 0.00 34.77 2.40
3548 4722 6.290294 AGATTGGATTTTTGTGGATCTTGG 57.710 37.500 0.00 0.00 0.00 3.61
3550 4724 6.953520 AGATTGGATTTTTGTGGATCTTGGTA 59.046 34.615 0.00 0.00 0.00 3.25
3576 4750 6.995511 TTTTAACGAAGGGATGGACATAAG 57.004 37.500 0.00 0.00 0.00 1.73
3577 4751 5.943349 TTAACGAAGGGATGGACATAAGA 57.057 39.130 0.00 0.00 0.00 2.10
3578 4752 3.821421 ACGAAGGGATGGACATAAGAC 57.179 47.619 0.00 0.00 0.00 3.01
3579 4753 3.104512 ACGAAGGGATGGACATAAGACA 58.895 45.455 0.00 0.00 0.00 3.41
3580 4754 3.517901 ACGAAGGGATGGACATAAGACAA 59.482 43.478 0.00 0.00 0.00 3.18
3581 4755 4.164221 ACGAAGGGATGGACATAAGACAAT 59.836 41.667 0.00 0.00 0.00 2.71
3582 4756 4.512944 CGAAGGGATGGACATAAGACAATG 59.487 45.833 0.00 0.00 0.00 2.82
3583 4757 4.443978 AGGGATGGACATAAGACAATGG 57.556 45.455 0.00 0.00 0.00 3.16
3584 4758 4.047166 AGGGATGGACATAAGACAATGGA 58.953 43.478 0.00 0.00 0.00 3.41
3585 4759 4.666907 AGGGATGGACATAAGACAATGGAT 59.333 41.667 0.00 0.00 0.00 3.41
3586 4760 5.851693 AGGGATGGACATAAGACAATGGATA 59.148 40.000 0.00 0.00 0.00 2.59
3587 4761 6.013032 AGGGATGGACATAAGACAATGGATAG 60.013 42.308 0.00 0.00 0.00 2.08
3588 4762 6.013379 GGGATGGACATAAGACAATGGATAGA 60.013 42.308 0.00 0.00 0.00 1.98
3589 4763 7.311549 GGGATGGACATAAGACAATGGATAGAT 60.312 40.741 0.00 0.00 0.00 1.98
3590 4764 8.105829 GGATGGACATAAGACAATGGATAGATT 58.894 37.037 0.00 0.00 0.00 2.40
3591 4765 8.859236 ATGGACATAAGACAATGGATAGATTG 57.141 34.615 0.00 0.00 38.97 2.67
3592 4766 7.226441 TGGACATAAGACAATGGATAGATTGG 58.774 38.462 0.00 0.00 37.60 3.16
3593 4767 6.150140 GGACATAAGACAATGGATAGATTGGC 59.850 42.308 0.00 0.00 41.12 4.52
3594 4768 6.604171 ACATAAGACAATGGATAGATTGGCA 58.396 36.000 0.00 0.00 42.97 4.92
3595 4769 7.062322 ACATAAGACAATGGATAGATTGGCAA 58.938 34.615 0.68 0.68 42.97 4.52
3596 4770 7.230108 ACATAAGACAATGGATAGATTGGCAAG 59.770 37.037 5.96 0.00 42.97 4.01
3597 4771 4.467769 AGACAATGGATAGATTGGCAAGG 58.532 43.478 5.96 0.00 42.97 3.61
3598 4772 4.079558 AGACAATGGATAGATTGGCAAGGT 60.080 41.667 5.96 0.00 42.97 3.50
3599 4773 3.956199 ACAATGGATAGATTGGCAAGGTG 59.044 43.478 5.96 0.00 37.60 4.00
3600 4774 2.734755 TGGATAGATTGGCAAGGTGG 57.265 50.000 5.96 0.00 0.00 4.61
3601 4775 1.215173 TGGATAGATTGGCAAGGTGGG 59.785 52.381 5.96 0.00 0.00 4.61
3602 4776 1.494721 GGATAGATTGGCAAGGTGGGA 59.505 52.381 5.96 0.00 0.00 4.37
3603 4777 2.108952 GGATAGATTGGCAAGGTGGGAT 59.891 50.000 5.96 0.00 0.00 3.85
3604 4778 3.330701 GGATAGATTGGCAAGGTGGGATA 59.669 47.826 5.96 0.00 0.00 2.59
3605 4779 4.018050 GGATAGATTGGCAAGGTGGGATAT 60.018 45.833 5.96 0.00 0.00 1.63
3606 4780 3.979501 AGATTGGCAAGGTGGGATATT 57.020 42.857 5.96 0.00 0.00 1.28
3607 4781 4.270317 AGATTGGCAAGGTGGGATATTT 57.730 40.909 5.96 0.00 0.00 1.40
3608 4782 4.623863 AGATTGGCAAGGTGGGATATTTT 58.376 39.130 5.96 0.00 0.00 1.82
3609 4783 4.651045 AGATTGGCAAGGTGGGATATTTTC 59.349 41.667 5.96 0.00 0.00 2.29
3610 4784 3.756082 TGGCAAGGTGGGATATTTTCT 57.244 42.857 0.00 0.00 0.00 2.52
3611 4785 3.364549 TGGCAAGGTGGGATATTTTCTG 58.635 45.455 0.00 0.00 0.00 3.02
3612 4786 3.245586 TGGCAAGGTGGGATATTTTCTGT 60.246 43.478 0.00 0.00 0.00 3.41
3613 4787 3.381590 GGCAAGGTGGGATATTTTCTGTC 59.618 47.826 0.00 0.00 0.00 3.51
3614 4788 3.065371 GCAAGGTGGGATATTTTCTGTCG 59.935 47.826 0.00 0.00 0.00 4.35
3615 4789 3.560636 AGGTGGGATATTTTCTGTCGG 57.439 47.619 0.00 0.00 0.00 4.79
3616 4790 1.947456 GGTGGGATATTTTCTGTCGGC 59.053 52.381 0.00 0.00 0.00 5.54
3617 4791 1.947456 GTGGGATATTTTCTGTCGGCC 59.053 52.381 0.00 0.00 0.00 6.13
3618 4792 1.562008 TGGGATATTTTCTGTCGGCCA 59.438 47.619 2.24 0.00 0.00 5.36
3619 4793 2.025793 TGGGATATTTTCTGTCGGCCAA 60.026 45.455 2.24 0.00 0.00 4.52
3620 4794 3.020984 GGGATATTTTCTGTCGGCCAAA 58.979 45.455 2.24 0.00 0.00 3.28
3621 4795 3.445805 GGGATATTTTCTGTCGGCCAAAA 59.554 43.478 2.24 1.40 0.00 2.44
3622 4796 4.440112 GGGATATTTTCTGTCGGCCAAAAG 60.440 45.833 2.24 0.00 0.00 2.27
3623 4797 4.398044 GGATATTTTCTGTCGGCCAAAAGA 59.602 41.667 2.24 0.00 0.00 2.52
3624 4798 3.643159 ATTTTCTGTCGGCCAAAAGAC 57.357 42.857 2.24 1.99 37.85 3.01
3625 4799 1.314730 TTTCTGTCGGCCAAAAGACC 58.685 50.000 2.24 0.00 36.61 3.85
3626 4800 0.181587 TTCTGTCGGCCAAAAGACCA 59.818 50.000 2.24 0.00 36.61 4.02
3627 4801 0.181587 TCTGTCGGCCAAAAGACCAA 59.818 50.000 2.24 0.00 36.61 3.67
3628 4802 0.593128 CTGTCGGCCAAAAGACCAAG 59.407 55.000 2.24 0.00 36.61 3.61
3629 4803 0.821711 TGTCGGCCAAAAGACCAAGG 60.822 55.000 2.24 0.00 36.61 3.61
3630 4804 0.822121 GTCGGCCAAAAGACCAAGGT 60.822 55.000 2.24 0.00 0.00 3.50
3631 4805 0.821711 TCGGCCAAAAGACCAAGGTG 60.822 55.000 2.24 0.00 0.00 4.00
3632 4806 1.805428 CGGCCAAAAGACCAAGGTGG 61.805 60.000 2.24 0.00 45.02 4.61
3643 4817 2.614134 CCAAGGTGGTTTGGGGATAA 57.386 50.000 0.00 0.00 43.16 1.75
3644 4818 2.896039 CCAAGGTGGTTTGGGGATAAA 58.104 47.619 0.00 0.00 43.16 1.40
3645 4819 3.449918 CCAAGGTGGTTTGGGGATAAAT 58.550 45.455 0.00 0.00 43.16 1.40
3646 4820 3.843619 CCAAGGTGGTTTGGGGATAAATT 59.156 43.478 0.00 0.00 43.16 1.82
3647 4821 4.288366 CCAAGGTGGTTTGGGGATAAATTT 59.712 41.667 0.00 0.00 43.16 1.82
3648 4822 5.222027 CCAAGGTGGTTTGGGGATAAATTTT 60.222 40.000 0.00 0.00 43.16 1.82
3649 4823 6.303054 CAAGGTGGTTTGGGGATAAATTTTT 58.697 36.000 0.00 0.00 0.00 1.94
3650 4824 5.875224 AGGTGGTTTGGGGATAAATTTTTG 58.125 37.500 0.00 0.00 0.00 2.44
3651 4825 5.608860 AGGTGGTTTGGGGATAAATTTTTGA 59.391 36.000 0.00 0.00 0.00 2.69
3652 4826 6.101881 AGGTGGTTTGGGGATAAATTTTTGAA 59.898 34.615 0.00 0.00 0.00 2.69
3653 4827 6.773200 GGTGGTTTGGGGATAAATTTTTGAAA 59.227 34.615 0.00 0.00 0.00 2.69
3654 4828 7.255312 GGTGGTTTGGGGATAAATTTTTGAAAC 60.255 37.037 0.00 0.00 0.00 2.78
3655 4829 7.500892 GTGGTTTGGGGATAAATTTTTGAAACT 59.499 33.333 0.00 0.00 0.00 2.66
3656 4830 8.714906 TGGTTTGGGGATAAATTTTTGAAACTA 58.285 29.630 0.00 0.00 0.00 2.24
3657 4831 9.562408 GGTTTGGGGATAAATTTTTGAAACTAA 57.438 29.630 0.00 0.00 0.00 2.24
3693 4867 9.715121 TCTACTTAACAAGTGGATTTATCGTTT 57.285 29.630 1.46 0.00 43.02 3.60
3700 4874 8.561738 ACAAGTGGATTTATCGTTTATTGTCT 57.438 30.769 0.00 0.00 0.00 3.41
3701 4875 8.450964 ACAAGTGGATTTATCGTTTATTGTCTG 58.549 33.333 0.00 0.00 0.00 3.51
3702 4876 8.664798 CAAGTGGATTTATCGTTTATTGTCTGA 58.335 33.333 0.00 0.00 0.00 3.27
3703 4877 8.425577 AGTGGATTTATCGTTTATTGTCTGAG 57.574 34.615 0.00 0.00 0.00 3.35
3704 4878 7.495934 AGTGGATTTATCGTTTATTGTCTGAGG 59.504 37.037 0.00 0.00 0.00 3.86
3705 4879 7.494625 GTGGATTTATCGTTTATTGTCTGAGGA 59.505 37.037 0.00 0.00 0.00 3.71
3706 4880 7.494625 TGGATTTATCGTTTATTGTCTGAGGAC 59.505 37.037 0.00 0.00 42.42 3.85
3707 4881 6.880822 TTTATCGTTTATTGTCTGAGGACG 57.119 37.500 0.00 0.00 44.83 4.79
3708 4882 4.713824 ATCGTTTATTGTCTGAGGACGA 57.286 40.909 0.00 0.00 44.83 4.20
3709 4883 4.713824 TCGTTTATTGTCTGAGGACGAT 57.286 40.909 0.00 4.59 45.55 3.73
3710 4884 5.823209 TCGTTTATTGTCTGAGGACGATA 57.177 39.130 0.00 2.92 42.85 2.92
3711 4885 5.817988 TCGTTTATTGTCTGAGGACGATAG 58.182 41.667 0.00 0.00 44.75 2.08
3712 4886 5.587443 TCGTTTATTGTCTGAGGACGATAGA 59.413 40.000 0.00 1.15 44.75 1.98
3713 4887 5.910166 CGTTTATTGTCTGAGGACGATAGAG 59.090 44.000 0.00 1.08 44.75 2.43
3714 4888 6.458478 CGTTTATTGTCTGAGGACGATAGAGT 60.458 42.308 0.00 0.00 44.75 3.24
3715 4889 4.909696 ATTGTCTGAGGACGATAGAGTG 57.090 45.455 0.00 0.00 42.85 3.51
3716 4890 3.351794 TGTCTGAGGACGATAGAGTGT 57.648 47.619 0.00 0.00 44.83 3.55
3717 4891 3.010420 TGTCTGAGGACGATAGAGTGTG 58.990 50.000 0.00 0.00 44.83 3.82
3718 4892 2.356382 GTCTGAGGACGATAGAGTGTGG 59.644 54.545 0.00 0.00 41.38 4.17
3719 4893 2.238898 TCTGAGGACGATAGAGTGTGGA 59.761 50.000 0.00 0.00 41.38 4.02
3720 4894 3.117851 TCTGAGGACGATAGAGTGTGGAT 60.118 47.826 0.00 0.00 41.38 3.41
3721 4895 4.102681 TCTGAGGACGATAGAGTGTGGATA 59.897 45.833 0.00 0.00 41.38 2.59
3722 4896 4.135306 TGAGGACGATAGAGTGTGGATAC 58.865 47.826 0.00 0.00 41.38 2.24
3723 4897 4.135306 GAGGACGATAGAGTGTGGATACA 58.865 47.826 0.00 0.00 43.50 2.29
3724 4898 4.138290 AGGACGATAGAGTGTGGATACAG 58.862 47.826 0.00 0.00 45.96 2.74
3725 4899 3.884091 GGACGATAGAGTGTGGATACAGT 59.116 47.826 0.00 0.00 45.96 3.55
3726 4900 4.338682 GGACGATAGAGTGTGGATACAGTT 59.661 45.833 0.00 0.00 45.96 3.16
3727 4901 5.530171 GGACGATAGAGTGTGGATACAGTTA 59.470 44.000 0.00 0.00 45.96 2.24
3728 4902 6.207025 GGACGATAGAGTGTGGATACAGTTAT 59.793 42.308 0.00 0.00 45.96 1.89
3729 4903 7.255520 GGACGATAGAGTGTGGATACAGTTATT 60.256 40.741 0.00 0.00 45.96 1.40
3730 4904 7.426410 ACGATAGAGTGTGGATACAGTTATTG 58.574 38.462 0.00 0.00 45.96 1.90
3731 4905 6.363626 CGATAGAGTGTGGATACAGTTATTGC 59.636 42.308 0.00 0.00 46.45 3.56
3732 4906 7.947284 CGATAGAGTGTGGATACAGTTATTGCA 60.947 40.741 0.00 0.00 46.45 4.08
3740 4914 7.566760 TGGATACAGTTATTGCATAACAAGG 57.433 36.000 16.29 10.31 45.80 3.61
3741 4915 7.342581 TGGATACAGTTATTGCATAACAAGGA 58.657 34.615 16.29 8.96 45.80 3.36
3742 4916 7.282224 TGGATACAGTTATTGCATAACAAGGAC 59.718 37.037 16.29 8.24 45.80 3.85
3743 4917 5.897377 ACAGTTATTGCATAACAAGGACC 57.103 39.130 16.29 0.00 45.80 4.46
3744 4918 5.570320 ACAGTTATTGCATAACAAGGACCT 58.430 37.500 16.29 0.00 45.80 3.85
3745 4919 6.717289 ACAGTTATTGCATAACAAGGACCTA 58.283 36.000 16.29 0.00 45.80 3.08
3746 4920 6.598064 ACAGTTATTGCATAACAAGGACCTAC 59.402 38.462 16.29 0.00 45.80 3.18
3747 4921 6.597672 CAGTTATTGCATAACAAGGACCTACA 59.402 38.462 16.29 0.00 45.80 2.74
3748 4922 7.283127 CAGTTATTGCATAACAAGGACCTACAT 59.717 37.037 16.29 0.00 45.80 2.29
3749 4923 7.834181 AGTTATTGCATAACAAGGACCTACATT 59.166 33.333 16.29 0.00 45.80 2.71
3750 4924 8.466798 GTTATTGCATAACAAGGACCTACATTT 58.533 33.333 0.00 0.00 42.87 2.32
3751 4925 6.509418 TTGCATAACAAGGACCTACATTTC 57.491 37.500 0.00 0.00 33.24 2.17
3752 4926 5.565509 TGCATAACAAGGACCTACATTTCA 58.434 37.500 0.00 0.00 0.00 2.69
3753 4927 6.007076 TGCATAACAAGGACCTACATTTCAA 58.993 36.000 0.00 0.00 0.00 2.69
3754 4928 6.150976 TGCATAACAAGGACCTACATTTCAAG 59.849 38.462 0.00 0.00 0.00 3.02
3755 4929 6.374333 GCATAACAAGGACCTACATTTCAAGA 59.626 38.462 0.00 0.00 0.00 3.02
3756 4930 7.626452 GCATAACAAGGACCTACATTTCAAGAC 60.626 40.741 0.00 0.00 0.00 3.01
3757 4931 4.652822 ACAAGGACCTACATTTCAAGACC 58.347 43.478 0.00 0.00 0.00 3.85
3758 4932 4.351111 ACAAGGACCTACATTTCAAGACCT 59.649 41.667 0.00 0.00 0.00 3.85
3759 4933 5.163088 ACAAGGACCTACATTTCAAGACCTT 60.163 40.000 0.00 0.00 35.94 3.50
3760 4934 4.911390 AGGACCTACATTTCAAGACCTTG 58.089 43.478 0.00 3.47 41.71 3.61
3761 4935 4.351111 AGGACCTACATTTCAAGACCTTGT 59.649 41.667 9.31 0.00 41.16 3.16
3762 4936 4.695928 GGACCTACATTTCAAGACCTTGTC 59.304 45.833 9.31 0.00 41.16 3.18
3763 4937 5.513267 GGACCTACATTTCAAGACCTTGTCT 60.513 44.000 9.31 0.00 45.64 3.41
3764 4938 5.552178 ACCTACATTTCAAGACCTTGTCTC 58.448 41.667 9.31 0.00 42.59 3.36
3765 4939 4.938226 CCTACATTTCAAGACCTTGTCTCC 59.062 45.833 9.31 0.00 42.59 3.71
3766 4940 4.713792 ACATTTCAAGACCTTGTCTCCT 57.286 40.909 9.31 0.00 42.59 3.69
3767 4941 5.825593 ACATTTCAAGACCTTGTCTCCTA 57.174 39.130 9.31 0.00 42.59 2.94
3768 4942 6.380079 ACATTTCAAGACCTTGTCTCCTAT 57.620 37.500 9.31 0.00 42.59 2.57
3769 4943 6.784031 ACATTTCAAGACCTTGTCTCCTATT 58.216 36.000 9.31 0.00 42.59 1.73
3770 4944 7.234355 ACATTTCAAGACCTTGTCTCCTATTT 58.766 34.615 9.31 0.00 42.59 1.40
3771 4945 7.725844 ACATTTCAAGACCTTGTCTCCTATTTT 59.274 33.333 9.31 0.00 42.59 1.82
3772 4946 7.745620 TTTCAAGACCTTGTCTCCTATTTTC 57.254 36.000 9.31 0.00 42.59 2.29
3773 4947 5.479306 TCAAGACCTTGTCTCCTATTTTCG 58.521 41.667 9.31 0.00 42.59 3.46
3774 4948 3.863041 AGACCTTGTCTCCTATTTTCGC 58.137 45.455 0.00 0.00 38.71 4.70
3775 4949 3.515901 AGACCTTGTCTCCTATTTTCGCT 59.484 43.478 0.00 0.00 38.71 4.93
3776 4950 3.863041 ACCTTGTCTCCTATTTTCGCTC 58.137 45.455 0.00 0.00 0.00 5.03
3777 4951 3.260884 ACCTTGTCTCCTATTTTCGCTCA 59.739 43.478 0.00 0.00 0.00 4.26
3778 4952 3.868077 CCTTGTCTCCTATTTTCGCTCAG 59.132 47.826 0.00 0.00 0.00 3.35
3779 4953 2.893637 TGTCTCCTATTTTCGCTCAGC 58.106 47.619 0.00 0.00 0.00 4.26
3780 4954 2.205911 GTCTCCTATTTTCGCTCAGCC 58.794 52.381 0.00 0.00 0.00 4.85
3781 4955 1.831106 TCTCCTATTTTCGCTCAGCCA 59.169 47.619 0.00 0.00 0.00 4.75
3782 4956 2.236146 TCTCCTATTTTCGCTCAGCCAA 59.764 45.455 0.00 0.00 0.00 4.52
3783 4957 3.009723 CTCCTATTTTCGCTCAGCCAAA 58.990 45.455 0.00 0.00 0.00 3.28
3784 4958 2.747446 TCCTATTTTCGCTCAGCCAAAC 59.253 45.455 0.00 0.00 0.00 2.93
3785 4959 2.487762 CCTATTTTCGCTCAGCCAAACA 59.512 45.455 0.00 0.00 0.00 2.83
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
16 18 1.109920 GGCCACTAGAGATGAGGCGA 61.110 60.000 0.00 0.00 46.12 5.54
23 25 3.982516 TGTCACTAAGGCCACTAGAGAT 58.017 45.455 16.59 0.00 0.00 2.75
29 31 0.035056 GCCATGTCACTAAGGCCACT 60.035 55.000 5.01 0.00 41.25 4.00
42 44 0.464373 GATCCACCATGTCGCCATGT 60.464 55.000 5.62 0.00 45.83 3.21
50 52 2.692368 AGCCCGGATCCACCATGT 60.692 61.111 13.41 0.00 38.90 3.21
63 65 3.991725 CTCCTGCCAGCAAGAGCCC 62.992 68.421 5.37 0.00 43.56 5.19
95 98 4.859798 CCTAACAAAACACAAAGAAACGCA 59.140 37.500 0.00 0.00 0.00 5.24
119 122 0.400213 TTCCCGAGCAGGACACAAAT 59.600 50.000 0.00 0.00 45.00 2.32
134 137 1.536284 CCGCTATTGTCTCGTCTTCCC 60.536 57.143 0.00 0.00 0.00 3.97
147 150 1.071385 CATCTTCAGGGAGCCGCTATT 59.929 52.381 0.00 0.00 0.00 1.73
148 151 0.683973 CATCTTCAGGGAGCCGCTAT 59.316 55.000 0.00 0.00 0.00 2.97
150 153 2.739996 CCATCTTCAGGGAGCCGCT 61.740 63.158 0.00 0.00 0.00 5.52
173 176 1.681076 GGCTAAACGGGGAGAACCA 59.319 57.895 0.00 0.00 42.91 3.67
186 189 1.307517 AATCGGGACAGGGGGCTAA 60.308 57.895 0.00 0.00 0.00 3.09
195 198 1.434555 CTAAACGCACAATCGGGACA 58.565 50.000 0.00 0.00 0.00 4.02
211 214 2.224597 ACATGCCCATCGATGATGCTAA 60.225 45.455 26.86 13.32 38.59 3.09
252 257 3.699038 CCGAGCAAATTCCCAAAGGATAA 59.301 43.478 0.00 0.00 43.54 1.75
260 265 1.408683 CCAGATCCGAGCAAATTCCCA 60.409 52.381 0.00 0.00 0.00 4.37
262 267 1.943340 GACCAGATCCGAGCAAATTCC 59.057 52.381 0.00 0.00 0.00 3.01
283 288 5.521735 AGATATACGAACGTAGACGAACTGT 59.478 40.000 9.41 4.46 43.02 3.55
284 289 5.972018 AGATATACGAACGTAGACGAACTG 58.028 41.667 9.41 0.00 43.02 3.16
302 307 7.921041 TCAGAAGGATACAACCTGAAGATAT 57.079 36.000 0.00 0.00 40.49 1.63
304 309 6.614906 AGATCAGAAGGATACAACCTGAAGAT 59.385 38.462 0.00 0.00 40.26 2.40
316 321 8.495260 TGAAGAGTAGTGTAGATCAGAAGGATA 58.505 37.037 0.00 0.00 36.00 2.59
347 353 0.888736 CACCAGAACATCAACCGCCA 60.889 55.000 0.00 0.00 0.00 5.69
356 362 1.672356 GGACAGCGCACCAGAACAT 60.672 57.895 11.47 0.00 0.00 2.71
379 386 0.613260 AAGTCGTCATGCTAAGGCCA 59.387 50.000 5.01 0.00 37.74 5.36
401 408 9.027129 CGAAAAATCGGTTACAGTAGATAATCA 57.973 33.333 0.00 0.00 0.00 2.57
418 425 0.300789 GCCGGAGCTACGAAAAATCG 59.699 55.000 22.92 1.27 36.06 3.34
419 426 1.365699 TGCCGGAGCTACGAAAAATC 58.634 50.000 22.92 1.85 40.80 2.17
425 432 1.035385 TTCTCATGCCGGAGCTACGA 61.035 55.000 22.92 0.00 40.80 3.43
427 434 0.249657 CCTTCTCATGCCGGAGCTAC 60.250 60.000 5.05 0.00 40.80 3.58
439 446 4.069232 CCGACAGCGCCCTTCTCA 62.069 66.667 2.29 0.00 35.83 3.27
462 469 1.080501 CTGAAGCGAGCCGAAGTCA 60.081 57.895 0.00 0.00 0.00 3.41
464 471 1.373497 CACTGAAGCGAGCCGAAGT 60.373 57.895 0.00 0.00 0.00 3.01
491 498 0.320374 CCGTAGACCACCTTGCAAGA 59.680 55.000 28.05 2.53 0.00 3.02
492 499 0.320374 TCCGTAGACCACCTTGCAAG 59.680 55.000 19.93 19.93 0.00 4.01
497 504 1.006758 TCCAGATCCGTAGACCACCTT 59.993 52.381 0.00 0.00 0.00 3.50
536 546 3.370978 GTGACGGTACAATGAACATCAGG 59.629 47.826 0.00 0.00 0.00 3.86
558 568 8.375608 ACTTCCAATCTATTCATCTTCAATCG 57.624 34.615 0.00 0.00 0.00 3.34
600 610 8.140112 AGTTCAAACACCAGATAGATTACTCT 57.860 34.615 0.00 0.00 35.39 3.24
633 643 5.633996 TTTGCACTTAAAAGAATTGCACG 57.366 34.783 6.11 0.00 42.69 5.34
642 652 9.640974 CAACTGAAAATCATTTGCACTTAAAAG 57.359 29.630 0.00 0.00 31.84 2.27
675 687 8.738106 GTTTTCTGTCACCTACATACTACTACT 58.262 37.037 0.00 0.00 37.50 2.57
676 688 7.972832 GGTTTTCTGTCACCTACATACTACTAC 59.027 40.741 0.00 0.00 37.50 2.73
677 689 7.123247 GGGTTTTCTGTCACCTACATACTACTA 59.877 40.741 0.00 0.00 37.50 1.82
859 886 9.019656 CAGCTAATACTAGTACATTCCATCTCT 57.980 37.037 4.31 0.00 0.00 3.10
860 887 7.757624 GCAGCTAATACTAGTACATTCCATCTC 59.242 40.741 4.31 0.00 0.00 2.75
891 1301 7.237471 ACCCATCCATCCTCTTAACAAATTTTT 59.763 33.333 0.00 0.00 0.00 1.94
978 1709 2.285743 AGAGAGGGGTTGGGAGGC 60.286 66.667 0.00 0.00 0.00 4.70
991 1725 2.042297 AGATGAGTGAGGTGGTGAGAGA 59.958 50.000 0.00 0.00 0.00 3.10
992 1726 2.426738 GAGATGAGTGAGGTGGTGAGAG 59.573 54.545 0.00 0.00 0.00 3.20
993 1727 2.225117 TGAGATGAGTGAGGTGGTGAGA 60.225 50.000 0.00 0.00 0.00 3.27
1042 1778 2.703007 AGGAATGAGTGAGATGGCTACC 59.297 50.000 0.00 0.00 0.00 3.18
1094 1850 6.438259 TCTCGAACGATCTACAGAAAGATT 57.562 37.500 0.00 0.00 36.33 2.40
1281 2063 1.990160 AACCGGCCTTGGTCTTCACA 61.990 55.000 0.00 0.00 42.89 3.58
1323 2105 1.219124 GCTCTCGTGGCTCATGGAA 59.781 57.895 0.00 0.00 0.00 3.53
1506 2297 1.984570 CTCCTCGCCCTCCAACTCA 60.985 63.158 0.00 0.00 0.00 3.41
1510 2301 2.364317 CTCCTCCTCGCCCTCCAA 60.364 66.667 0.00 0.00 0.00 3.53
1511 2302 2.863019 CTTCTCCTCCTCGCCCTCCA 62.863 65.000 0.00 0.00 0.00 3.86
1514 2305 2.762043 GCTTCTCCTCCTCGCCCT 60.762 66.667 0.00 0.00 0.00 5.19
1517 2308 1.140804 GTCAGCTTCTCCTCCTCGC 59.859 63.158 0.00 0.00 0.00 5.03
1520 2311 2.621556 AAGAGTCAGCTTCTCCTCCT 57.378 50.000 10.86 0.00 32.93 3.69
1523 2314 2.313342 TCCCTAAGAGTCAGCTTCTCCT 59.687 50.000 10.86 2.96 32.93 3.69
1527 2318 2.167487 CACCTCCCTAAGAGTCAGCTTC 59.833 54.545 0.00 0.00 41.47 3.86
1528 2319 2.183679 CACCTCCCTAAGAGTCAGCTT 58.816 52.381 0.00 0.00 41.47 3.74
1536 2342 1.861982 GGTACTGCACCTCCCTAAGA 58.138 55.000 0.00 0.00 44.79 2.10
1788 2594 1.703438 GCACCATGCTCTGCTTCTCG 61.703 60.000 0.00 0.00 40.96 4.04
1815 2666 1.654954 CCACCATGCTCTGCTTCTGC 61.655 60.000 0.00 0.00 40.20 4.26
1862 2785 1.077644 TCGTCCTCCTCCTCTTCCG 60.078 63.158 0.00 0.00 0.00 4.30
1866 2789 1.304952 CACCTCGTCCTCCTCCTCT 59.695 63.158 0.00 0.00 0.00 3.69
2007 2936 3.238497 CGCGATGGGGATGGGGTA 61.238 66.667 0.00 0.00 0.00 3.69
2037 2969 1.939769 GAGCGGCTTCTTCCTCGTCT 61.940 60.000 2.97 0.00 0.00 4.18
2039 2971 2.219325 CTGAGCGGCTTCTTCCTCGT 62.219 60.000 2.97 0.00 0.00 4.18
2157 3092 0.393267 CCTCGTCGACCTCTTCCTCT 60.393 60.000 10.58 0.00 0.00 3.69
2439 3381 6.216569 AGCAAGGTACATTACATACTGATCG 58.783 40.000 0.00 0.00 0.00 3.69
2477 3419 7.201565 GGAGCAGTAAACAGATTGATACTCAAC 60.202 40.741 0.00 0.00 39.45 3.18
2494 3436 5.571285 AGTATGGATAGATCGGAGCAGTAA 58.429 41.667 0.00 0.00 0.00 2.24
2497 3439 4.460731 TCAAGTATGGATAGATCGGAGCAG 59.539 45.833 0.00 0.00 0.00 4.24
2508 3451 3.898123 GGAGTGGAGCTCAAGTATGGATA 59.102 47.826 17.19 0.00 45.88 2.59
2541 3484 2.459934 CTGCGTGAATCATGCTACGTA 58.540 47.619 25.44 6.62 45.53 3.57
2602 3546 7.667557 TGATTAATTTGGATACGAGGGAGTAG 58.332 38.462 0.00 0.00 42.51 2.57
2605 3549 6.311445 CGATGATTAATTTGGATACGAGGGAG 59.689 42.308 0.00 0.00 42.51 4.30
2612 3556 6.246420 AGCTGCGATGATTAATTTGGATAC 57.754 37.500 0.00 0.00 0.00 2.24
2613 3557 5.412594 GGAGCTGCGATGATTAATTTGGATA 59.587 40.000 0.00 0.00 0.00 2.59
2652 3596 1.543944 TTTTCGGACGGAGGGGGTAC 61.544 60.000 0.00 0.00 0.00 3.34
2653 3597 0.835543 TTTTTCGGACGGAGGGGGTA 60.836 55.000 0.00 0.00 0.00 3.69
2654 3598 2.120737 CTTTTTCGGACGGAGGGGGT 62.121 60.000 0.00 0.00 0.00 4.95
2655 3599 1.376812 CTTTTTCGGACGGAGGGGG 60.377 63.158 0.00 0.00 0.00 5.40
2656 3600 2.038837 GCTTTTTCGGACGGAGGGG 61.039 63.158 0.00 0.00 0.00 4.79
2657 3601 2.038837 GGCTTTTTCGGACGGAGGG 61.039 63.158 0.00 0.00 0.00 4.30
2658 3602 1.003718 AGGCTTTTTCGGACGGAGG 60.004 57.895 0.00 0.00 0.00 4.30
2659 3603 0.602905 ACAGGCTTTTTCGGACGGAG 60.603 55.000 0.00 0.00 0.00 4.63
2660 3604 0.601841 GACAGGCTTTTTCGGACGGA 60.602 55.000 0.00 0.00 0.00 4.69
2661 3605 1.574702 GGACAGGCTTTTTCGGACGG 61.575 60.000 0.00 0.00 0.00 4.79
2662 3606 1.574702 GGGACAGGCTTTTTCGGACG 61.575 60.000 0.00 0.00 0.00 4.79
2663 3607 0.250770 AGGGACAGGCTTTTTCGGAC 60.251 55.000 0.00 0.00 0.00 4.79
2664 3608 0.036306 GAGGGACAGGCTTTTTCGGA 59.964 55.000 0.00 0.00 0.00 4.55
2665 3609 0.250727 TGAGGGACAGGCTTTTTCGG 60.251 55.000 0.00 0.00 0.00 4.30
2666 3610 1.604604 TTGAGGGACAGGCTTTTTCG 58.395 50.000 0.00 0.00 0.00 3.46
2667 3611 3.306294 CCATTTGAGGGACAGGCTTTTTC 60.306 47.826 0.00 0.00 0.00 2.29
2668 3612 2.634453 CCATTTGAGGGACAGGCTTTTT 59.366 45.455 0.00 0.00 0.00 1.94
2669 3613 2.158325 TCCATTTGAGGGACAGGCTTTT 60.158 45.455 0.00 0.00 0.00 2.27
2670 3614 1.428912 TCCATTTGAGGGACAGGCTTT 59.571 47.619 0.00 0.00 0.00 3.51
2671 3615 1.075601 TCCATTTGAGGGACAGGCTT 58.924 50.000 0.00 0.00 0.00 4.35
2672 3616 1.064166 CATCCATTTGAGGGACAGGCT 60.064 52.381 0.00 0.00 37.23 4.58
2673 3617 1.341383 ACATCCATTTGAGGGACAGGC 60.341 52.381 0.00 0.00 37.23 4.85
2674 3618 2.814805 ACATCCATTTGAGGGACAGG 57.185 50.000 0.00 0.00 37.23 4.00
2675 3619 5.301835 AGATACATCCATTTGAGGGACAG 57.698 43.478 0.00 0.00 37.23 3.51
2676 3620 5.221722 GCTAGATACATCCATTTGAGGGACA 60.222 44.000 0.00 0.00 37.23 4.02
2677 3621 5.221722 TGCTAGATACATCCATTTGAGGGAC 60.222 44.000 0.00 0.00 37.23 4.46
2678 3622 4.907269 TGCTAGATACATCCATTTGAGGGA 59.093 41.667 0.00 0.00 39.14 4.20
2679 3623 4.999950 GTGCTAGATACATCCATTTGAGGG 59.000 45.833 0.00 0.00 0.00 4.30
2680 3624 4.999950 GGTGCTAGATACATCCATTTGAGG 59.000 45.833 0.00 0.00 0.00 3.86
2681 3625 5.614308 TGGTGCTAGATACATCCATTTGAG 58.386 41.667 0.00 0.00 0.00 3.02
2682 3626 5.628797 TGGTGCTAGATACATCCATTTGA 57.371 39.130 0.00 0.00 0.00 2.69
2683 3627 5.824624 ACTTGGTGCTAGATACATCCATTTG 59.175 40.000 0.00 0.00 0.00 2.32
2684 3628 6.006275 ACTTGGTGCTAGATACATCCATTT 57.994 37.500 0.00 0.00 0.00 2.32
2685 3629 5.636903 ACTTGGTGCTAGATACATCCATT 57.363 39.130 0.00 0.00 0.00 3.16
2686 3630 5.636903 AACTTGGTGCTAGATACATCCAT 57.363 39.130 0.00 0.00 0.00 3.41
2687 3631 5.661312 ACTAACTTGGTGCTAGATACATCCA 59.339 40.000 0.00 0.00 0.00 3.41
2688 3632 5.986135 CACTAACTTGGTGCTAGATACATCC 59.014 44.000 0.00 0.00 0.00 3.51
2700 3644 3.937814 TGTATCCAGCACTAACTTGGTG 58.062 45.455 0.97 0.97 43.31 4.17
2701 3645 4.844349 ATGTATCCAGCACTAACTTGGT 57.156 40.909 0.00 0.00 33.65 3.67
2702 3646 5.185454 TGAATGTATCCAGCACTAACTTGG 58.815 41.667 0.00 0.00 0.00 3.61
2703 3647 6.932356 ATGAATGTATCCAGCACTAACTTG 57.068 37.500 0.00 0.00 0.00 3.16
2704 3648 6.258727 CGAATGAATGTATCCAGCACTAACTT 59.741 38.462 0.00 0.00 0.00 2.66
2705 3649 5.755375 CGAATGAATGTATCCAGCACTAACT 59.245 40.000 0.00 0.00 0.00 2.24
2706 3650 5.753438 TCGAATGAATGTATCCAGCACTAAC 59.247 40.000 0.00 0.00 0.00 2.34
2707 3651 5.912892 TCGAATGAATGTATCCAGCACTAA 58.087 37.500 0.00 0.00 0.00 2.24
2708 3652 5.301805 TCTCGAATGAATGTATCCAGCACTA 59.698 40.000 0.00 0.00 0.00 2.74
2709 3653 4.100035 TCTCGAATGAATGTATCCAGCACT 59.900 41.667 0.00 0.00 0.00 4.40
2710 3654 4.371786 TCTCGAATGAATGTATCCAGCAC 58.628 43.478 0.00 0.00 0.00 4.40
2711 3655 4.342092 TCTCTCGAATGAATGTATCCAGCA 59.658 41.667 0.00 0.00 0.00 4.41
2712 3656 4.683781 GTCTCTCGAATGAATGTATCCAGC 59.316 45.833 0.00 0.00 0.00 4.85
2713 3657 5.836347 TGTCTCTCGAATGAATGTATCCAG 58.164 41.667 0.00 0.00 0.00 3.86
2714 3658 5.852282 TGTCTCTCGAATGAATGTATCCA 57.148 39.130 0.00 0.00 0.00 3.41
2715 3659 6.276847 ACTTGTCTCTCGAATGAATGTATCC 58.723 40.000 0.00 0.00 0.00 2.59
2716 3660 7.763172 AACTTGTCTCTCGAATGAATGTATC 57.237 36.000 0.00 0.00 0.00 2.24
2717 3661 7.065085 CCAAACTTGTCTCTCGAATGAATGTAT 59.935 37.037 0.00 0.00 0.00 2.29
2718 3662 6.368791 CCAAACTTGTCTCTCGAATGAATGTA 59.631 38.462 0.00 0.00 0.00 2.29
2719 3663 5.180117 CCAAACTTGTCTCTCGAATGAATGT 59.820 40.000 0.00 0.00 0.00 2.71
2720 3664 5.391310 CCCAAACTTGTCTCTCGAATGAATG 60.391 44.000 0.00 0.00 0.00 2.67
2721 3665 4.697352 CCCAAACTTGTCTCTCGAATGAAT 59.303 41.667 0.00 0.00 0.00 2.57
2722 3666 4.065088 CCCAAACTTGTCTCTCGAATGAA 58.935 43.478 0.00 0.00 0.00 2.57
2723 3667 3.323691 TCCCAAACTTGTCTCTCGAATGA 59.676 43.478 0.00 0.00 0.00 2.57
2724 3668 3.433615 GTCCCAAACTTGTCTCTCGAATG 59.566 47.826 0.00 0.00 0.00 2.67
2725 3669 3.071023 TGTCCCAAACTTGTCTCTCGAAT 59.929 43.478 0.00 0.00 0.00 3.34
2726 3670 2.432874 TGTCCCAAACTTGTCTCTCGAA 59.567 45.455 0.00 0.00 0.00 3.71
2727 3671 2.036387 TGTCCCAAACTTGTCTCTCGA 58.964 47.619 0.00 0.00 0.00 4.04
2728 3672 2.526304 TGTCCCAAACTTGTCTCTCG 57.474 50.000 0.00 0.00 0.00 4.04
2729 3673 3.809905 ACTTGTCCCAAACTTGTCTCTC 58.190 45.455 0.00 0.00 0.00 3.20
2730 3674 3.933861 ACTTGTCCCAAACTTGTCTCT 57.066 42.857 0.00 0.00 0.00 3.10
2731 3675 4.983671 AAACTTGTCCCAAACTTGTCTC 57.016 40.909 0.00 0.00 0.00 3.36
2732 3676 5.738619 AAAAACTTGTCCCAAACTTGTCT 57.261 34.783 0.00 0.00 0.00 3.41
2784 3728 8.450578 TTGATCCGAATTAATTGTCATAGCTT 57.549 30.769 5.17 0.00 0.00 3.74
2787 3731 8.292448 CCCTTTGATCCGAATTAATTGTCATAG 58.708 37.037 5.17 8.53 0.00 2.23
2789 3733 6.833416 TCCCTTTGATCCGAATTAATTGTCAT 59.167 34.615 5.17 0.00 0.00 3.06
2790 3734 6.184068 TCCCTTTGATCCGAATTAATTGTCA 58.816 36.000 5.17 2.26 0.00 3.58
2802 3746 2.108168 TCACCTACTCCCTTTGATCCG 58.892 52.381 0.00 0.00 0.00 4.18
2803 3747 4.709250 GAATCACCTACTCCCTTTGATCC 58.291 47.826 0.00 0.00 0.00 3.36
2806 3750 3.194968 GTCGAATCACCTACTCCCTTTGA 59.805 47.826 0.00 0.00 0.00 2.69
2809 3753 3.103080 AGTCGAATCACCTACTCCCTT 57.897 47.619 0.00 0.00 0.00 3.95
2812 3756 7.690952 ATCTATAAGTCGAATCACCTACTCC 57.309 40.000 0.00 0.00 0.00 3.85
2813 3757 8.569641 ACAATCTATAAGTCGAATCACCTACTC 58.430 37.037 0.00 0.00 0.00 2.59
2846 3790 3.056891 GGATTGCTACAGGCTAGAGCTAG 60.057 52.174 17.70 0.13 42.39 3.42
2848 3792 1.691434 GGATTGCTACAGGCTAGAGCT 59.309 52.381 17.70 0.00 42.39 4.09
2850 3794 3.640967 AGAAGGATTGCTACAGGCTAGAG 59.359 47.826 0.00 0.00 42.39 2.43
2851 3795 3.386078 CAGAAGGATTGCTACAGGCTAGA 59.614 47.826 0.00 0.00 42.39 2.43
2853 3797 2.158900 GCAGAAGGATTGCTACAGGCTA 60.159 50.000 0.00 0.00 42.39 3.93
2855 3799 1.020437 GCAGAAGGATTGCTACAGGC 58.980 55.000 0.00 0.00 38.51 4.85
2856 3800 2.012673 GTGCAGAAGGATTGCTACAGG 58.987 52.381 0.00 0.00 42.02 4.00
2871 3903 1.135575 GGATCAAAAGCCTTCGTGCAG 60.136 52.381 0.00 0.00 0.00 4.41
2872 3904 0.881118 GGATCAAAAGCCTTCGTGCA 59.119 50.000 0.00 0.00 0.00 4.57
2909 3941 9.462174 TTCTACTTGCACAAATTAAGTTCATTG 57.538 29.630 0.00 0.00 36.22 2.82
2926 3958 1.797025 ACCTCAACGCTTCTACTTGC 58.203 50.000 0.00 0.00 0.00 4.01
2958 3991 0.391597 GGAAGAAGTGTCCCACGTCA 59.608 55.000 11.76 0.00 43.30 4.35
2983 4016 3.115390 CCCCTTGACTCAATCCCTTCTA 58.885 50.000 0.00 0.00 0.00 2.10
2988 4021 0.256177 GACCCCCTTGACTCAATCCC 59.744 60.000 0.00 0.00 0.00 3.85
3005 4038 1.136500 AGAGAACGCGGGATAAAGGAC 59.864 52.381 12.47 0.00 0.00 3.85
3037 4196 6.978338 CAATGAGTATTGCCAGCATATCTTT 58.022 36.000 0.00 0.00 37.47 2.52
3057 4216 2.996249 TCTCCTTGGCTCTAGCAATG 57.004 50.000 4.07 0.00 44.36 2.82
3104 4263 3.927142 CGAAACTCACCCATTCACTAGAC 59.073 47.826 0.00 0.00 0.00 2.59
3112 4271 6.494666 TTATAGGATCGAAACTCACCCATT 57.505 37.500 0.00 0.00 0.00 3.16
3161 4320 4.285775 TCGCCTTATCCATGTCATATTCCA 59.714 41.667 0.00 0.00 0.00 3.53
3171 4330 9.113838 AGCTTTATATTTATCGCCTTATCCATG 57.886 33.333 0.00 0.00 0.00 3.66
3177 4336 7.446769 TGACCAGCTTTATATTTATCGCCTTA 58.553 34.615 0.00 0.00 0.00 2.69
3178 4337 6.296026 TGACCAGCTTTATATTTATCGCCTT 58.704 36.000 0.00 0.00 0.00 4.35
3182 4341 8.087982 ACACATGACCAGCTTTATATTTATCG 57.912 34.615 0.00 0.00 0.00 2.92
3192 4351 4.081752 TCAAACAAACACATGACCAGCTTT 60.082 37.500 0.00 0.00 0.00 3.51
3196 4355 3.181488 TGCTCAAACAAACACATGACCAG 60.181 43.478 0.00 0.00 0.00 4.00
3208 4367 6.899393 AAGACCAGATAATTGCTCAAACAA 57.101 33.333 0.00 0.00 0.00 2.83
3223 4382 6.303054 TGTGGAAATTGATGTTAAGACCAGA 58.697 36.000 0.00 0.00 0.00 3.86
3225 4384 6.968263 TTGTGGAAATTGATGTTAAGACCA 57.032 33.333 0.00 0.00 0.00 4.02
3226 4385 8.141268 TCTTTTGTGGAAATTGATGTTAAGACC 58.859 33.333 0.00 0.00 0.00 3.85
3231 4390 8.463930 ACTCTCTTTTGTGGAAATTGATGTTA 57.536 30.769 0.00 0.00 0.00 2.41
3234 4393 8.652810 AAAACTCTCTTTTGTGGAAATTGATG 57.347 30.769 0.00 0.00 0.00 3.07
3261 4420 1.332375 CCTCTTTGACGCGTCCAAAAA 59.668 47.619 34.34 25.50 33.68 1.94
3296 4457 4.123497 TCTCACACCCAAATAGATGTCG 57.877 45.455 0.00 0.00 0.00 4.35
3297 4458 5.297776 CCAATCTCACACCCAAATAGATGTC 59.702 44.000 0.00 0.00 0.00 3.06
3299 4460 4.581824 CCCAATCTCACACCCAAATAGATG 59.418 45.833 0.00 0.00 0.00 2.90
3301 4462 3.591527 ACCCAATCTCACACCCAAATAGA 59.408 43.478 0.00 0.00 0.00 1.98
3302 4463 3.947834 GACCCAATCTCACACCCAAATAG 59.052 47.826 0.00 0.00 0.00 1.73
3304 4465 2.807676 GACCCAATCTCACACCCAAAT 58.192 47.619 0.00 0.00 0.00 2.32
3307 4468 1.676968 CGACCCAATCTCACACCCA 59.323 57.895 0.00 0.00 0.00 4.51
3310 4471 0.741221 GGAGCGACCCAATCTCACAC 60.741 60.000 0.00 0.00 0.00 3.82
3322 4483 1.134560 AGATAACTGAACGGGAGCGAC 59.865 52.381 0.00 0.00 0.00 5.19
3325 4486 2.036089 CCCTAGATAACTGAACGGGAGC 59.964 54.545 0.00 0.00 31.85 4.70
3329 4490 4.344102 TGGAATCCCTAGATAACTGAACGG 59.656 45.833 0.00 0.00 30.42 4.44
3331 4492 7.971183 GATTGGAATCCCTAGATAACTGAAC 57.029 40.000 0.00 0.00 30.42 3.18
3349 4510 2.350057 TTTGTTCGTGGTGGATTGGA 57.650 45.000 0.00 0.00 0.00 3.53
3352 4513 3.697045 TCACTTTTTGTTCGTGGTGGATT 59.303 39.130 0.00 0.00 0.00 3.01
3353 4514 3.283751 TCACTTTTTGTTCGTGGTGGAT 58.716 40.909 0.00 0.00 0.00 3.41
3358 4519 7.692908 ATACATTTTCACTTTTTGTTCGTGG 57.307 32.000 0.00 0.00 0.00 4.94
3362 4534 9.528018 TCCTCAATACATTTTCACTTTTTGTTC 57.472 29.630 0.00 0.00 0.00 3.18
3369 4541 9.533831 AAACCTATCCTCAATACATTTTCACTT 57.466 29.630 0.00 0.00 0.00 3.16
3372 4544 9.527157 TTCAAACCTATCCTCAATACATTTTCA 57.473 29.630 0.00 0.00 0.00 2.69
3380 4552 9.807921 AACTTCTTTTCAAACCTATCCTCAATA 57.192 29.630 0.00 0.00 0.00 1.90
3384 4556 7.574030 GCTCAACTTCTTTTCAAACCTATCCTC 60.574 40.741 0.00 0.00 0.00 3.71
3391 4563 4.998788 ACAGCTCAACTTCTTTTCAAACC 58.001 39.130 0.00 0.00 0.00 3.27
3392 4564 5.289434 CCAACAGCTCAACTTCTTTTCAAAC 59.711 40.000 0.00 0.00 0.00 2.93
3434 4606 3.593096 GAAAACCAACCTACCTCCGTAG 58.407 50.000 0.00 0.00 41.55 3.51
3437 4609 1.270465 ACGAAAACCAACCTACCTCCG 60.270 52.381 0.00 0.00 0.00 4.63
3438 4610 2.148768 CACGAAAACCAACCTACCTCC 58.851 52.381 0.00 0.00 0.00 4.30
3449 4621 0.041576 GCACCGAGTTCACGAAAACC 60.042 55.000 0.00 0.00 35.09 3.27
3452 4624 2.129607 GTAAGCACCGAGTTCACGAAA 58.870 47.619 0.00 0.00 35.09 3.46
3453 4625 1.774639 GTAAGCACCGAGTTCACGAA 58.225 50.000 0.00 0.00 35.09 3.85
3454 4626 0.386352 CGTAAGCACCGAGTTCACGA 60.386 55.000 0.00 0.00 35.09 4.35
3455 4627 0.386352 TCGTAAGCACCGAGTTCACG 60.386 55.000 0.00 0.00 37.18 4.35
3465 4637 4.444720 GCACATAGGTAGATTCGTAAGCAC 59.555 45.833 0.00 0.00 37.18 4.40
3469 4641 4.988540 GCATGCACATAGGTAGATTCGTAA 59.011 41.667 14.21 0.00 0.00 3.18
3473 4645 6.382869 AAAAGCATGCACATAGGTAGATTC 57.617 37.500 21.98 0.00 0.00 2.52
3474 4646 6.780457 AAAAAGCATGCACATAGGTAGATT 57.220 33.333 21.98 0.00 0.00 2.40
3497 4671 5.163447 CCTGATCCCGACATGTAGTTCTAAA 60.163 44.000 0.00 0.00 0.00 1.85
3500 4674 2.695666 CCTGATCCCGACATGTAGTTCT 59.304 50.000 0.00 0.00 0.00 3.01
3504 4678 3.819564 TTTCCTGATCCCGACATGTAG 57.180 47.619 0.00 0.00 0.00 2.74
3508 4682 4.202441 CAATCTTTTCCTGATCCCGACAT 58.798 43.478 0.00 0.00 0.00 3.06
3509 4683 3.609853 CAATCTTTTCCTGATCCCGACA 58.390 45.455 0.00 0.00 0.00 4.35
3512 4686 3.281727 TCCAATCTTTTCCTGATCCCG 57.718 47.619 0.00 0.00 0.00 5.14
3516 4690 7.016465 TCCACAAAAATCCAATCTTTTCCTGAT 59.984 33.333 0.00 0.00 0.00 2.90
3519 4693 6.745794 TCCACAAAAATCCAATCTTTTCCT 57.254 33.333 0.00 0.00 0.00 3.36
3520 4694 7.389232 AGATCCACAAAAATCCAATCTTTTCC 58.611 34.615 0.00 0.00 0.00 3.13
3556 4730 4.712829 TGTCTTATGTCCATCCCTTCGTTA 59.287 41.667 0.00 0.00 0.00 3.18
3557 4731 3.517901 TGTCTTATGTCCATCCCTTCGTT 59.482 43.478 0.00 0.00 0.00 3.85
3558 4732 3.104512 TGTCTTATGTCCATCCCTTCGT 58.895 45.455 0.00 0.00 0.00 3.85
3559 4733 3.819564 TGTCTTATGTCCATCCCTTCG 57.180 47.619 0.00 0.00 0.00 3.79
3560 4734 4.823989 CCATTGTCTTATGTCCATCCCTTC 59.176 45.833 0.00 0.00 0.00 3.46
3561 4735 4.478317 TCCATTGTCTTATGTCCATCCCTT 59.522 41.667 0.00 0.00 0.00 3.95
3562 4736 4.047166 TCCATTGTCTTATGTCCATCCCT 58.953 43.478 0.00 0.00 0.00 4.20
3563 4737 4.437682 TCCATTGTCTTATGTCCATCCC 57.562 45.455 0.00 0.00 0.00 3.85
3564 4738 7.009179 TCTATCCATTGTCTTATGTCCATCC 57.991 40.000 0.00 0.00 0.00 3.51
3565 4739 8.944029 CAATCTATCCATTGTCTTATGTCCATC 58.056 37.037 0.00 0.00 0.00 3.51
3566 4740 7.886970 CCAATCTATCCATTGTCTTATGTCCAT 59.113 37.037 0.00 0.00 32.61 3.41
3567 4741 7.226441 CCAATCTATCCATTGTCTTATGTCCA 58.774 38.462 0.00 0.00 32.61 4.02
3568 4742 6.150140 GCCAATCTATCCATTGTCTTATGTCC 59.850 42.308 0.00 0.00 32.61 4.02
3569 4743 6.712095 TGCCAATCTATCCATTGTCTTATGTC 59.288 38.462 0.00 0.00 32.61 3.06
3570 4744 6.604171 TGCCAATCTATCCATTGTCTTATGT 58.396 36.000 0.00 0.00 32.61 2.29
3571 4745 7.309012 CCTTGCCAATCTATCCATTGTCTTATG 60.309 40.741 0.00 0.00 32.61 1.90
3572 4746 6.718454 CCTTGCCAATCTATCCATTGTCTTAT 59.282 38.462 0.00 0.00 32.61 1.73
3573 4747 6.064060 CCTTGCCAATCTATCCATTGTCTTA 58.936 40.000 0.00 0.00 32.61 2.10
3574 4748 4.891756 CCTTGCCAATCTATCCATTGTCTT 59.108 41.667 0.00 0.00 32.61 3.01
3575 4749 4.079558 ACCTTGCCAATCTATCCATTGTCT 60.080 41.667 0.00 0.00 32.61 3.41
3576 4750 4.037208 CACCTTGCCAATCTATCCATTGTC 59.963 45.833 0.00 0.00 32.61 3.18
3577 4751 3.956199 CACCTTGCCAATCTATCCATTGT 59.044 43.478 0.00 0.00 32.61 2.71
3578 4752 3.319972 CCACCTTGCCAATCTATCCATTG 59.680 47.826 0.00 0.00 34.06 2.82
3579 4753 3.569491 CCACCTTGCCAATCTATCCATT 58.431 45.455 0.00 0.00 0.00 3.16
3580 4754 2.158415 CCCACCTTGCCAATCTATCCAT 60.158 50.000 0.00 0.00 0.00 3.41
3581 4755 1.215173 CCCACCTTGCCAATCTATCCA 59.785 52.381 0.00 0.00 0.00 3.41
3582 4756 1.494721 TCCCACCTTGCCAATCTATCC 59.505 52.381 0.00 0.00 0.00 2.59
3583 4757 3.515602 ATCCCACCTTGCCAATCTATC 57.484 47.619 0.00 0.00 0.00 2.08
3584 4758 5.605540 AATATCCCACCTTGCCAATCTAT 57.394 39.130 0.00 0.00 0.00 1.98
3585 4759 5.402054 AAATATCCCACCTTGCCAATCTA 57.598 39.130 0.00 0.00 0.00 1.98
3586 4760 3.979501 AATATCCCACCTTGCCAATCT 57.020 42.857 0.00 0.00 0.00 2.40
3587 4761 4.651045 AGAAAATATCCCACCTTGCCAATC 59.349 41.667 0.00 0.00 0.00 2.67
3588 4762 4.406649 CAGAAAATATCCCACCTTGCCAAT 59.593 41.667 0.00 0.00 0.00 3.16
3589 4763 3.768757 CAGAAAATATCCCACCTTGCCAA 59.231 43.478 0.00 0.00 0.00 4.52
3590 4764 3.245586 ACAGAAAATATCCCACCTTGCCA 60.246 43.478 0.00 0.00 0.00 4.92
3591 4765 3.365472 ACAGAAAATATCCCACCTTGCC 58.635 45.455 0.00 0.00 0.00 4.52
3592 4766 3.065371 CGACAGAAAATATCCCACCTTGC 59.935 47.826 0.00 0.00 0.00 4.01
3593 4767 3.627577 CCGACAGAAAATATCCCACCTTG 59.372 47.826 0.00 0.00 0.00 3.61
3594 4768 3.886123 CCGACAGAAAATATCCCACCTT 58.114 45.455 0.00 0.00 0.00 3.50
3595 4769 2.421529 GCCGACAGAAAATATCCCACCT 60.422 50.000 0.00 0.00 0.00 4.00
3596 4770 1.947456 GCCGACAGAAAATATCCCACC 59.053 52.381 0.00 0.00 0.00 4.61
3597 4771 1.947456 GGCCGACAGAAAATATCCCAC 59.053 52.381 0.00 0.00 0.00 4.61
3598 4772 1.562008 TGGCCGACAGAAAATATCCCA 59.438 47.619 0.00 0.00 0.00 4.37
3599 4773 2.341846 TGGCCGACAGAAAATATCCC 57.658 50.000 0.00 0.00 0.00 3.85
3600 4774 4.398044 TCTTTTGGCCGACAGAAAATATCC 59.602 41.667 6.36 0.00 0.00 2.59
3601 4775 5.332707 GTCTTTTGGCCGACAGAAAATATC 58.667 41.667 10.57 0.00 0.00 1.63
3602 4776 4.157840 GGTCTTTTGGCCGACAGAAAATAT 59.842 41.667 10.57 0.00 32.83 1.28
3603 4777 3.504520 GGTCTTTTGGCCGACAGAAAATA 59.495 43.478 10.57 0.00 32.83 1.40
3604 4778 2.296190 GGTCTTTTGGCCGACAGAAAAT 59.704 45.455 10.57 0.00 32.83 1.82
3605 4779 1.679153 GGTCTTTTGGCCGACAGAAAA 59.321 47.619 10.57 4.19 32.83 2.29
3606 4780 1.314730 GGTCTTTTGGCCGACAGAAA 58.685 50.000 10.57 0.00 32.83 2.52
3607 4781 3.015516 GGTCTTTTGGCCGACAGAA 57.984 52.632 10.57 0.00 32.83 3.02
3608 4782 4.792087 GGTCTTTTGGCCGACAGA 57.208 55.556 4.60 4.60 32.83 3.41
3614 4788 2.049435 CCACCTTGGTCTTTTGGCC 58.951 57.895 0.00 0.00 46.50 5.36
3624 4798 2.614134 TTATCCCCAAACCACCTTGG 57.386 50.000 0.00 0.00 44.77 3.61
3625 4799 5.497464 AAATTTATCCCCAAACCACCTTG 57.503 39.130 0.00 0.00 0.00 3.61
3626 4800 6.101881 TCAAAAATTTATCCCCAAACCACCTT 59.898 34.615 0.00 0.00 0.00 3.50
3627 4801 5.608860 TCAAAAATTTATCCCCAAACCACCT 59.391 36.000 0.00 0.00 0.00 4.00
3628 4802 5.870706 TCAAAAATTTATCCCCAAACCACC 58.129 37.500 0.00 0.00 0.00 4.61
3629 4803 7.500892 AGTTTCAAAAATTTATCCCCAAACCAC 59.499 33.333 0.00 0.00 0.00 4.16
3630 4804 7.578203 AGTTTCAAAAATTTATCCCCAAACCA 58.422 30.769 0.00 0.00 0.00 3.67
3631 4805 9.562408 TTAGTTTCAAAAATTTATCCCCAAACC 57.438 29.630 0.00 0.00 0.00 3.27
3664 4838 9.314321 CGATAAATCCACTTGTTAAGTAGACAT 57.686 33.333 0.00 0.00 40.46 3.06
3665 4839 8.308931 ACGATAAATCCACTTGTTAAGTAGACA 58.691 33.333 0.00 0.00 40.46 3.41
3666 4840 8.699283 ACGATAAATCCACTTGTTAAGTAGAC 57.301 34.615 0.00 0.00 40.46 2.59
3667 4841 9.715121 AAACGATAAATCCACTTGTTAAGTAGA 57.285 29.630 0.00 0.00 40.46 2.59
3674 4848 9.010029 AGACAATAAACGATAAATCCACTTGTT 57.990 29.630 0.00 0.00 0.00 2.83
3675 4849 8.450964 CAGACAATAAACGATAAATCCACTTGT 58.549 33.333 0.00 0.00 0.00 3.16
3676 4850 8.664798 TCAGACAATAAACGATAAATCCACTTG 58.335 33.333 0.00 0.00 0.00 3.16
3677 4851 8.786826 TCAGACAATAAACGATAAATCCACTT 57.213 30.769 0.00 0.00 0.00 3.16
3678 4852 7.495934 CCTCAGACAATAAACGATAAATCCACT 59.504 37.037 0.00 0.00 0.00 4.00
3679 4853 7.494625 TCCTCAGACAATAAACGATAAATCCAC 59.505 37.037 0.00 0.00 0.00 4.02
3680 4854 7.494625 GTCCTCAGACAATAAACGATAAATCCA 59.505 37.037 0.00 0.00 42.99 3.41
3681 4855 7.306632 CGTCCTCAGACAATAAACGATAAATCC 60.307 40.741 0.00 0.00 43.73 3.01
3682 4856 7.434307 TCGTCCTCAGACAATAAACGATAAATC 59.566 37.037 0.00 0.00 43.73 2.17
3683 4857 7.262772 TCGTCCTCAGACAATAAACGATAAAT 58.737 34.615 0.00 0.00 43.73 1.40
3684 4858 6.623486 TCGTCCTCAGACAATAAACGATAAA 58.377 36.000 0.00 0.00 43.73 1.40
3685 4859 6.198650 TCGTCCTCAGACAATAAACGATAA 57.801 37.500 0.00 0.00 43.73 1.75
3686 4860 5.823209 TCGTCCTCAGACAATAAACGATA 57.177 39.130 0.00 0.00 43.73 2.92
3687 4861 4.713824 TCGTCCTCAGACAATAAACGAT 57.286 40.909 0.00 0.00 43.73 3.73
3688 4862 4.713824 ATCGTCCTCAGACAATAAACGA 57.286 40.909 0.00 0.00 43.73 3.85
3689 4863 5.817988 TCTATCGTCCTCAGACAATAAACG 58.182 41.667 0.00 0.00 43.73 3.60
3690 4864 6.693545 CACTCTATCGTCCTCAGACAATAAAC 59.306 42.308 0.00 0.00 43.73 2.01
3691 4865 6.377429 ACACTCTATCGTCCTCAGACAATAAA 59.623 38.462 0.00 0.00 43.73 1.40
3692 4866 5.886474 ACACTCTATCGTCCTCAGACAATAA 59.114 40.000 0.00 0.00 43.73 1.40
3693 4867 5.297029 CACACTCTATCGTCCTCAGACAATA 59.703 44.000 0.00 0.00 43.73 1.90
3694 4868 4.097135 CACACTCTATCGTCCTCAGACAAT 59.903 45.833 0.00 0.00 43.73 2.71
3695 4869 3.440522 CACACTCTATCGTCCTCAGACAA 59.559 47.826 0.00 0.00 43.73 3.18
3696 4870 3.010420 CACACTCTATCGTCCTCAGACA 58.990 50.000 0.00 0.00 43.73 3.41
3697 4871 2.356382 CCACACTCTATCGTCCTCAGAC 59.644 54.545 0.00 0.00 39.83 3.51
3698 4872 2.238898 TCCACACTCTATCGTCCTCAGA 59.761 50.000 0.00 0.00 0.00 3.27
3699 4873 2.644676 TCCACACTCTATCGTCCTCAG 58.355 52.381 0.00 0.00 0.00 3.35
3700 4874 2.801077 TCCACACTCTATCGTCCTCA 57.199 50.000 0.00 0.00 0.00 3.86
3701 4875 4.135306 TGTATCCACACTCTATCGTCCTC 58.865 47.826 0.00 0.00 0.00 3.71
3702 4876 4.138290 CTGTATCCACACTCTATCGTCCT 58.862 47.826 0.00 0.00 0.00 3.85
3703 4877 3.884091 ACTGTATCCACACTCTATCGTCC 59.116 47.826 0.00 0.00 0.00 4.79
3704 4878 5.502153 AACTGTATCCACACTCTATCGTC 57.498 43.478 0.00 0.00 0.00 4.20
3705 4879 7.426410 CAATAACTGTATCCACACTCTATCGT 58.574 38.462 0.00 0.00 0.00 3.73
3706 4880 6.363626 GCAATAACTGTATCCACACTCTATCG 59.636 42.308 0.00 0.00 0.00 2.92
3707 4881 7.210174 TGCAATAACTGTATCCACACTCTATC 58.790 38.462 0.00 0.00 0.00 2.08
3708 4882 7.124573 TGCAATAACTGTATCCACACTCTAT 57.875 36.000 0.00 0.00 0.00 1.98
3709 4883 6.538945 TGCAATAACTGTATCCACACTCTA 57.461 37.500 0.00 0.00 0.00 2.43
3710 4884 5.420725 TGCAATAACTGTATCCACACTCT 57.579 39.130 0.00 0.00 0.00 3.24
3711 4885 7.786178 TTATGCAATAACTGTATCCACACTC 57.214 36.000 0.00 0.00 32.95 3.51
3725 4899 8.588290 AAATGTAGGTCCTTGTTATGCAATAA 57.412 30.769 0.00 0.00 36.20 1.40
3726 4900 7.831690 TGAAATGTAGGTCCTTGTTATGCAATA 59.168 33.333 0.00 0.00 36.36 1.90
3727 4901 6.663093 TGAAATGTAGGTCCTTGTTATGCAAT 59.337 34.615 0.00 0.00 36.36 3.56
3728 4902 6.007076 TGAAATGTAGGTCCTTGTTATGCAA 58.993 36.000 0.00 0.00 35.50 4.08
3729 4903 5.565509 TGAAATGTAGGTCCTTGTTATGCA 58.434 37.500 0.00 0.00 0.00 3.96
3730 4904 6.374333 TCTTGAAATGTAGGTCCTTGTTATGC 59.626 38.462 0.00 0.00 0.00 3.14
3731 4905 7.148239 GGTCTTGAAATGTAGGTCCTTGTTATG 60.148 40.741 0.00 0.00 0.00 1.90
3732 4906 6.884836 GGTCTTGAAATGTAGGTCCTTGTTAT 59.115 38.462 0.00 0.00 0.00 1.89
3733 4907 6.043938 AGGTCTTGAAATGTAGGTCCTTGTTA 59.956 38.462 0.00 0.00 0.00 2.41
3734 4908 5.070685 GGTCTTGAAATGTAGGTCCTTGTT 58.929 41.667 0.00 0.00 0.00 2.83
3735 4909 4.351111 AGGTCTTGAAATGTAGGTCCTTGT 59.649 41.667 0.00 0.00 0.00 3.16
3736 4910 4.911390 AGGTCTTGAAATGTAGGTCCTTG 58.089 43.478 0.00 0.00 0.00 3.61
3737 4911 5.163088 ACAAGGTCTTGAAATGTAGGTCCTT 60.163 40.000 16.55 0.00 42.93 3.36
3738 4912 4.351111 ACAAGGTCTTGAAATGTAGGTCCT 59.649 41.667 16.55 0.00 42.93 3.85
3739 4913 4.652822 ACAAGGTCTTGAAATGTAGGTCC 58.347 43.478 16.55 0.00 42.93 4.46
3740 4914 5.552178 AGACAAGGTCTTGAAATGTAGGTC 58.448 41.667 16.55 1.83 40.28 3.85
3741 4915 5.513267 GGAGACAAGGTCTTGAAATGTAGGT 60.513 44.000 16.55 0.00 43.53 3.08
3742 4916 4.938226 GGAGACAAGGTCTTGAAATGTAGG 59.062 45.833 16.55 0.00 43.53 3.18
3743 4917 5.799213 AGGAGACAAGGTCTTGAAATGTAG 58.201 41.667 16.55 0.00 43.53 2.74
3744 4918 5.825593 AGGAGACAAGGTCTTGAAATGTA 57.174 39.130 16.55 0.00 43.53 2.29
3745 4919 4.713792 AGGAGACAAGGTCTTGAAATGT 57.286 40.909 16.55 0.00 43.53 2.71
3746 4920 7.693969 AAATAGGAGACAAGGTCTTGAAATG 57.306 36.000 16.55 0.00 43.53 2.32
3747 4921 7.119846 CGAAAATAGGAGACAAGGTCTTGAAAT 59.880 37.037 16.55 2.94 43.53 2.17
3748 4922 6.426937 CGAAAATAGGAGACAAGGTCTTGAAA 59.573 38.462 16.55 0.00 43.53 2.69
3749 4923 5.932303 CGAAAATAGGAGACAAGGTCTTGAA 59.068 40.000 16.55 0.00 43.53 2.69
3750 4924 5.479306 CGAAAATAGGAGACAAGGTCTTGA 58.521 41.667 16.55 0.00 43.53 3.02
3751 4925 4.093556 GCGAAAATAGGAGACAAGGTCTTG 59.906 45.833 8.97 8.97 43.53 3.02
3752 4926 4.020128 AGCGAAAATAGGAGACAAGGTCTT 60.020 41.667 0.00 0.00 43.53 3.01
3753 4927 3.515901 AGCGAAAATAGGAGACAAGGTCT 59.484 43.478 0.00 0.00 46.42 3.85
3754 4928 3.863041 AGCGAAAATAGGAGACAAGGTC 58.137 45.455 0.00 0.00 0.00 3.85
3755 4929 3.260884 TGAGCGAAAATAGGAGACAAGGT 59.739 43.478 0.00 0.00 0.00 3.50
3756 4930 3.861840 TGAGCGAAAATAGGAGACAAGG 58.138 45.455 0.00 0.00 0.00 3.61
3757 4931 3.308323 GCTGAGCGAAAATAGGAGACAAG 59.692 47.826 0.00 0.00 0.00 3.16
3758 4932 3.262420 GCTGAGCGAAAATAGGAGACAA 58.738 45.455 0.00 0.00 0.00 3.18
3759 4933 2.418746 GGCTGAGCGAAAATAGGAGACA 60.419 50.000 0.00 0.00 0.00 3.41
3760 4934 2.205911 GGCTGAGCGAAAATAGGAGAC 58.794 52.381 0.00 0.00 0.00 3.36
3761 4935 1.831106 TGGCTGAGCGAAAATAGGAGA 59.169 47.619 0.00 0.00 0.00 3.71
3762 4936 2.315925 TGGCTGAGCGAAAATAGGAG 57.684 50.000 0.00 0.00 0.00 3.69
3763 4937 2.747446 GTTTGGCTGAGCGAAAATAGGA 59.253 45.455 16.04 0.00 37.91 2.94
3764 4938 2.487762 TGTTTGGCTGAGCGAAAATAGG 59.512 45.455 16.04 0.00 37.91 2.57
3765 4939 3.829886 TGTTTGGCTGAGCGAAAATAG 57.170 42.857 16.04 0.00 37.91 1.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.