Multiple sequence alignment - TraesCS5B01G569100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G569100 chr5B 100.000 4813 0 0 1 4813 711735654 711740466 0.000000e+00 8889.0
1 TraesCS5B01G569100 chr5B 90.625 1664 148 7 873 2531 711963040 711964700 0.000000e+00 2202.0
2 TraesCS5B01G569100 chr5B 90.007 1351 128 4 1030 2375 711334753 711333405 0.000000e+00 1740.0
3 TraesCS5B01G569100 chr5B 84.074 1237 145 24 2551 3765 711933239 711934445 0.000000e+00 1146.0
4 TraesCS5B01G569100 chr5B 84.888 1158 105 27 2656 3780 711350899 711349779 0.000000e+00 1105.0
5 TraesCS5B01G569100 chr5B 89.350 723 76 1 151 872 711962253 711962975 0.000000e+00 907.0
6 TraesCS5B01G569100 chr5B 87.237 760 72 12 127 872 711353548 711352800 0.000000e+00 843.0
7 TraesCS5B01G569100 chr5B 82.839 944 108 28 2924 3825 711406810 711405879 0.000000e+00 797.0
8 TraesCS5B01G569100 chr5B 90.411 219 15 3 91 303 712207311 712207529 2.840000e-72 283.0
9 TraesCS5B01G569100 chr5B 78.406 389 42 22 4059 4446 711349694 711349347 1.050000e-51 215.0
10 TraesCS5B01G569100 chr5B 78.365 208 19 11 4315 4519 711331645 711331461 1.420000e-20 111.0
11 TraesCS5B01G569100 chr5B 88.889 81 4 1 3775 3855 711934511 711934586 1.430000e-15 95.3
12 TraesCS5B01G569100 chr5D 89.547 1789 153 17 873 2653 561924477 561926239 0.000000e+00 2237.0
13 TraesCS5B01G569100 chr5D 90.734 1662 149 5 873 2532 561897142 561898800 0.000000e+00 2211.0
14 TraesCS5B01G569100 chr5D 84.656 1688 227 20 873 2535 556539850 556538170 0.000000e+00 1653.0
15 TraesCS5B01G569100 chr5D 89.564 1284 125 5 1231 2507 561643498 561642217 0.000000e+00 1620.0
16 TraesCS5B01G569100 chr5D 89.813 1178 110 7 873 2041 552859952 552858776 0.000000e+00 1502.0
17 TraesCS5B01G569100 chr5D 85.185 1242 128 20 2569 3765 561898802 561900032 0.000000e+00 1223.0
18 TraesCS5B01G569100 chr5D 84.805 1257 123 30 2575 3768 561642184 561640933 0.000000e+00 1201.0
19 TraesCS5B01G569100 chr5D 85.881 1112 128 19 2656 3745 561926308 561927412 0.000000e+00 1157.0
20 TraesCS5B01G569100 chr5D 84.875 1157 112 30 2656 3777 551882009 551883137 0.000000e+00 1109.0
21 TraesCS5B01G569100 chr5D 86.049 1025 111 16 2656 3670 552858046 552857044 0.000000e+00 1072.0
22 TraesCS5B01G569100 chr5D 89.263 801 63 14 91 872 561644747 561643951 0.000000e+00 981.0
23 TraesCS5B01G569100 chr5D 89.290 775 53 9 128 872 561923638 561924412 0.000000e+00 944.0
24 TraesCS5B01G569100 chr5D 85.461 791 86 12 92 872 551878925 551879696 0.000000e+00 797.0
25 TraesCS5B01G569100 chr5D 83.837 761 94 18 134 872 556540665 556539912 0.000000e+00 697.0
26 TraesCS5B01G569100 chr5D 90.060 332 33 0 873 1204 561643886 561643555 9.570000e-117 431.0
27 TraesCS5B01G569100 chr5D 77.143 385 39 18 4168 4520 561927580 561927947 1.380000e-40 178.0
28 TraesCS5B01G569100 chr7B 89.754 1669 155 10 873 2528 1349304 1350969 0.000000e+00 2121.0
29 TraesCS5B01G569100 chr7B 89.756 1640 141 15 873 2506 1036256 1034638 0.000000e+00 2073.0
30 TraesCS5B01G569100 chr7B 86.505 1156 102 27 2658 3780 883491 882357 0.000000e+00 1221.0
31 TraesCS5B01G569100 chr7B 86.505 1156 102 27 2658 3780 887962 886828 0.000000e+00 1221.0
32 TraesCS5B01G569100 chr7B 84.404 981 117 14 2822 3780 1034259 1033293 0.000000e+00 931.0
33 TraesCS5B01G569100 chr7B 87.768 793 73 15 95 872 1037101 1036318 0.000000e+00 905.0
34 TraesCS5B01G569100 chr7B 87.049 803 81 14 86 872 834744 833949 0.000000e+00 885.0
35 TraesCS5B01G569100 chr7B 91.240 605 47 2 268 872 1305173 1305771 0.000000e+00 819.0
36 TraesCS5B01G569100 chr7B 77.302 630 60 41 4059 4631 886698 886095 1.310000e-75 294.0
37 TraesCS5B01G569100 chr7B 80.563 391 28 27 3856 4221 830194 829827 1.720000e-64 257.0
38 TraesCS5B01G569100 chr7B 78.099 484 35 30 4102 4523 1033041 1032567 1.730000e-59 241.0
39 TraesCS5B01G569100 chr7B 87.685 203 14 8 4059 4252 882227 882027 4.850000e-55 226.0
40 TraesCS5B01G569100 chr7B 85.789 190 15 12 4445 4626 1099665 1099480 1.770000e-44 191.0
41 TraesCS5B01G569100 chr7B 96.629 89 3 0 2565 2653 1034612 1034524 1.080000e-31 148.0
42 TraesCS5B01G569100 chr7B 95.455 88 3 1 2569 2655 883646 883559 6.500000e-29 139.0
43 TraesCS5B01G569100 chr7B 95.455 88 3 1 2569 2655 888117 888030 6.500000e-29 139.0
44 TraesCS5B01G569100 chr7B 95.294 85 4 0 2569 2653 832241 832157 8.400000e-28 135.0
45 TraesCS5B01G569100 chr7B 90.123 81 5 3 4464 4543 829474 829396 8.520000e-18 102.0
46 TraesCS5B01G569100 chr7B 100.000 31 0 0 3825 3855 830246 830216 1.870000e-04 58.4
47 TraesCS5B01G569100 chr7B 91.111 45 0 2 4059 4099 1033167 1033123 1.870000e-04 58.4
48 TraesCS5B01G569100 chr7B 100.000 29 0 0 3827 3855 882289 882261 2.000000e-03 54.7
49 TraesCS5B01G569100 chr7B 100.000 29 0 0 3827 3855 886760 886732 2.000000e-03 54.7
50 TraesCS5B01G569100 chr4B 89.705 1661 163 8 873 2531 656880227 656881881 0.000000e+00 2113.0
51 TraesCS5B01G569100 chr4B 88.351 764 77 5 115 869 656879396 656880156 0.000000e+00 907.0
52 TraesCS5B01G569100 chr4B 83.461 913 115 17 2833 3725 656881998 656882894 0.000000e+00 817.0
53 TraesCS5B01G569100 chr4D 89.585 1661 165 8 873 2531 509853797 509852143 0.000000e+00 2102.0
54 TraesCS5B01G569100 chr4D 88.918 758 72 5 121 869 509854622 509853868 0.000000e+00 924.0
55 TraesCS5B01G569100 chr4D 83.461 913 115 18 2833 3725 509852026 509851130 0.000000e+00 817.0
56 TraesCS5B01G569100 chr5A 88.019 1661 175 11 873 2531 698691331 698689693 0.000000e+00 1943.0
57 TraesCS5B01G569100 chr5A 84.211 912 108 18 2833 3725 698689576 698688682 0.000000e+00 854.0
58 TraesCS5B01G569100 chr5A 86.856 776 70 11 121 869 698692172 698691402 0.000000e+00 839.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G569100 chr5B 711735654 711740466 4812 False 8889.000000 8889 100.000000 1 4813 1 chr5B.!!$F1 4812
1 TraesCS5B01G569100 chr5B 711962253 711964700 2447 False 1554.500000 2202 89.987500 151 2531 2 chr5B.!!$F4 2380
2 TraesCS5B01G569100 chr5B 711331461 711334753 3292 True 925.500000 1740 84.186000 1030 4519 2 chr5B.!!$R2 3489
3 TraesCS5B01G569100 chr5B 711405879 711406810 931 True 797.000000 797 82.839000 2924 3825 1 chr5B.!!$R1 901
4 TraesCS5B01G569100 chr5B 711349347 711353548 4201 True 721.000000 1105 83.510333 127 4446 3 chr5B.!!$R3 4319
5 TraesCS5B01G569100 chr5B 711933239 711934586 1347 False 620.650000 1146 86.481500 2551 3855 2 chr5B.!!$F3 1304
6 TraesCS5B01G569100 chr5D 561897142 561900032 2890 False 1717.000000 2211 87.959500 873 3765 2 chr5D.!!$F2 2892
7 TraesCS5B01G569100 chr5D 552857044 552859952 2908 True 1287.000000 1502 87.931000 873 3670 2 chr5D.!!$R1 2797
8 TraesCS5B01G569100 chr5D 556538170 556540665 2495 True 1175.000000 1653 84.246500 134 2535 2 chr5D.!!$R2 2401
9 TraesCS5B01G569100 chr5D 561923638 561927947 4309 False 1129.000000 2237 85.465250 128 4520 4 chr5D.!!$F3 4392
10 TraesCS5B01G569100 chr5D 561640933 561644747 3814 True 1058.250000 1620 88.423000 91 3768 4 chr5D.!!$R3 3677
11 TraesCS5B01G569100 chr5D 551878925 551883137 4212 False 953.000000 1109 85.168000 92 3777 2 chr5D.!!$F1 3685
12 TraesCS5B01G569100 chr7B 1349304 1350969 1665 False 2121.000000 2121 89.754000 873 2528 1 chr7B.!!$F2 1655
13 TraesCS5B01G569100 chr7B 1305173 1305771 598 False 819.000000 819 91.240000 268 872 1 chr7B.!!$F1 604
14 TraesCS5B01G569100 chr7B 1032567 1037101 4534 True 726.066667 2073 87.961167 95 4523 6 chr7B.!!$R4 4428
15 TraesCS5B01G569100 chr7B 882027 888117 6090 True 418.675000 1221 91.113375 2569 4631 8 chr7B.!!$R3 2062
16 TraesCS5B01G569100 chr7B 829396 834744 5348 True 287.480000 885 90.605800 86 4543 5 chr7B.!!$R2 4457
17 TraesCS5B01G569100 chr4B 656879396 656882894 3498 False 1279.000000 2113 87.172333 115 3725 3 chr4B.!!$F1 3610
18 TraesCS5B01G569100 chr4D 509851130 509854622 3492 True 1281.000000 2102 87.321333 121 3725 3 chr4D.!!$R1 3604
19 TraesCS5B01G569100 chr5A 698688682 698692172 3490 True 1212.000000 1943 86.362000 121 3725 3 chr5A.!!$R1 3604

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
725 822 0.037605 AACCCTGTTAGCTCCGTTCG 60.038 55.000 0.00 0.0 0.00 3.95 F
1234 1539 1.132527 TGGGTGATCGATCCCCCTATT 60.133 52.381 36.18 0.0 43.96 1.73 F
2461 2808 0.750249 AGTTTTTCGTTGCCCCAAGG 59.250 50.000 0.00 0.0 0.00 3.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2461 2808 0.105778 GGCATAGAGGGCAGAGACAC 59.894 60.0 0.00 0.0 0.0 3.67 R
2475 2822 0.613260 GTGTGGAGGTGTGAGGCATA 59.387 55.0 0.00 0.0 0.0 3.14 R
4025 10068 0.106708 AACGACATGTCCACACTGCT 59.893 50.0 20.03 0.0 0.0 4.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.277142 GTACACCCAAGACCAATAGGG 57.723 52.381 0.00 0.00 46.96 3.53
21 22 2.053747 ACACCCAAGACCAATAGGGA 57.946 50.000 2.90 0.00 44.30 4.20
22 23 2.573463 ACACCCAAGACCAATAGGGAT 58.427 47.619 2.90 0.00 44.30 3.85
23 24 2.242196 ACACCCAAGACCAATAGGGATG 59.758 50.000 2.90 1.00 44.30 3.51
24 25 1.852965 ACCCAAGACCAATAGGGATGG 59.147 52.381 2.90 0.00 44.30 3.51
32 33 2.867624 CCAATAGGGATGGTGGTGATG 58.132 52.381 0.00 0.00 40.01 3.07
33 34 2.233271 CAATAGGGATGGTGGTGATGC 58.767 52.381 0.00 0.00 0.00 3.91
34 35 1.825105 ATAGGGATGGTGGTGATGCT 58.175 50.000 0.00 0.00 0.00 3.79
35 36 0.839277 TAGGGATGGTGGTGATGCTG 59.161 55.000 0.00 0.00 0.00 4.41
36 37 2.123428 GGGATGGTGGTGATGCTGC 61.123 63.158 0.00 0.00 0.00 5.25
37 38 1.077212 GGATGGTGGTGATGCTGCT 60.077 57.895 0.00 0.00 0.00 4.24
38 39 1.381928 GGATGGTGGTGATGCTGCTG 61.382 60.000 0.00 0.00 0.00 4.41
39 40 2.001361 GATGGTGGTGATGCTGCTGC 62.001 60.000 8.89 8.89 40.20 5.25
40 41 2.360852 GGTGGTGATGCTGCTGCT 60.361 61.111 17.00 2.26 40.48 4.24
41 42 2.697761 GGTGGTGATGCTGCTGCTG 61.698 63.158 17.00 0.77 40.48 4.41
42 43 3.060000 TGGTGATGCTGCTGCTGC 61.060 61.111 22.51 22.51 40.48 5.25
43 44 2.750637 GGTGATGCTGCTGCTGCT 60.751 61.111 27.67 15.76 40.48 4.24
44 45 2.485582 GTGATGCTGCTGCTGCTG 59.514 61.111 27.67 16.73 40.48 4.41
50 51 2.255554 CTGCTGCTGCTGCTGTTG 59.744 61.111 27.67 13.98 39.81 3.33
51 52 3.898627 CTGCTGCTGCTGCTGTTGC 62.899 63.158 27.67 16.48 39.81 4.17
52 53 4.719369 GCTGCTGCTGCTGTTGCC 62.719 66.667 22.10 3.77 39.81 4.52
53 54 3.292159 CTGCTGCTGCTGTTGCCA 61.292 61.111 17.00 0.00 40.48 4.92
54 55 3.268965 CTGCTGCTGCTGTTGCCAG 62.269 63.158 17.00 0.00 41.91 4.85
55 56 2.981909 GCTGCTGCTGTTGCCAGA 60.982 61.111 8.53 0.00 41.50 3.86
56 57 2.979197 GCTGCTGCTGTTGCCAGAG 61.979 63.158 8.53 0.00 41.50 3.35
57 58 2.979197 CTGCTGCTGTTGCCAGAGC 61.979 63.158 0.00 0.00 41.50 4.09
58 59 2.981909 GCTGCTGTTGCCAGAGCA 60.982 61.111 9.39 9.39 46.79 4.26
69 70 4.969196 CAGAGCACCACGCCACGT 62.969 66.667 0.00 0.00 44.04 4.49
70 71 4.664677 AGAGCACCACGCCACGTC 62.665 66.667 0.00 0.00 44.04 4.34
71 72 4.961511 GAGCACCACGCCACGTCA 62.962 66.667 0.00 0.00 44.04 4.35
74 75 4.901123 CACCACGCCACGTCACCA 62.901 66.667 0.00 0.00 38.32 4.17
75 76 4.164087 ACCACGCCACGTCACCAA 62.164 61.111 0.00 0.00 38.32 3.67
76 77 3.645975 CCACGCCACGTCACCAAC 61.646 66.667 0.00 0.00 38.32 3.77
77 78 2.587753 CACGCCACGTCACCAACT 60.588 61.111 0.00 0.00 38.32 3.16
78 79 2.279918 ACGCCACGTCACCAACTC 60.280 61.111 0.00 0.00 33.69 3.01
79 80 3.041940 CGCCACGTCACCAACTCC 61.042 66.667 0.00 0.00 0.00 3.85
80 81 2.110213 GCCACGTCACCAACTCCA 59.890 61.111 0.00 0.00 0.00 3.86
81 82 1.961277 GCCACGTCACCAACTCCAG 60.961 63.158 0.00 0.00 0.00 3.86
82 83 1.445942 CCACGTCACCAACTCCAGT 59.554 57.895 0.00 0.00 0.00 4.00
83 84 0.179056 CCACGTCACCAACTCCAGTT 60.179 55.000 0.00 0.00 39.12 3.16
84 85 1.217882 CACGTCACCAACTCCAGTTC 58.782 55.000 0.00 0.00 35.83 3.01
89 90 2.037251 GTCACCAACTCCAGTTCTGCTA 59.963 50.000 0.00 0.00 35.83 3.49
309 358 6.174720 TCAGACTGGTTCCATGATTATACC 57.825 41.667 1.81 0.00 0.00 2.73
356 405 6.378280 AGACACTTTTGAGGAAACTGTCAATT 59.622 34.615 11.24 0.00 44.43 2.32
386 453 3.368013 CGATACTGGTGCCACAAAGACTA 60.368 47.826 0.00 0.00 0.00 2.59
630 727 6.750660 AGATCATCTTCAGAGATCCATTGT 57.249 37.500 0.00 0.00 40.67 2.71
670 767 6.903419 CAAGAGGTTTCTAATTGTCTTGGAC 58.097 40.000 0.00 0.00 38.04 4.02
693 790 4.143115 CGATATATGGAAATGTGACGGTGC 60.143 45.833 0.00 0.00 0.00 5.01
694 791 2.779755 TATGGAAATGTGACGGTGCT 57.220 45.000 0.00 0.00 0.00 4.40
725 822 0.037605 AACCCTGTTAGCTCCGTTCG 60.038 55.000 0.00 0.00 0.00 3.95
729 826 1.359848 CTGTTAGCTCCGTTCGCAAT 58.640 50.000 0.00 0.00 0.00 3.56
778 875 3.546724 TGTCACAACTCGATTCCCAAAA 58.453 40.909 0.00 0.00 0.00 2.44
838 941 3.197766 TGCGAGGTTTGGAGTCTAATGAT 59.802 43.478 0.00 0.00 0.00 2.45
842 945 5.874810 CGAGGTTTGGAGTCTAATGATTTCA 59.125 40.000 0.00 0.00 0.00 2.69
850 953 9.904198 TTGGAGTCTAATGATTTCATCACATTA 57.096 29.630 0.00 0.00 43.01 1.90
897 1067 2.579201 GGTTCTCCGCTAGCAGCA 59.421 61.111 16.45 0.00 42.58 4.41
906 1076 1.400242 CCGCTAGCAGCAAAAACAGTC 60.400 52.381 16.45 0.00 42.58 3.51
928 1098 3.381908 CGGTAGACTATTGCAGAAGGACT 59.618 47.826 2.84 4.29 0.00 3.85
1026 1268 8.046294 TGCCGTCTTTAAAAATTAGCTATGAA 57.954 30.769 0.00 0.00 0.00 2.57
1131 1373 4.656100 TCATCTCTGGGTTTCAATTGGA 57.344 40.909 5.42 0.00 0.00 3.53
1217 1522 5.368145 TCTCATGAAGGTATTCGATTTGGG 58.632 41.667 0.00 0.00 38.34 4.12
1228 1533 1.512926 CGATTTGGGTGATCGATCCC 58.487 55.000 22.31 20.52 46.93 3.85
1234 1539 1.132527 TGGGTGATCGATCCCCCTATT 60.133 52.381 36.18 0.00 43.96 1.73
1288 1593 2.954318 AGTGTTTCTGCACAAGAATGCT 59.046 40.909 0.00 0.00 44.46 3.79
1533 1865 4.585162 AGTCTGCGTGTCCTATTTATAGCT 59.415 41.667 0.00 0.00 0.00 3.32
1562 1894 5.769662 AGTCTGCACAATCTTTTCCATACAA 59.230 36.000 0.00 0.00 0.00 2.41
1569 1901 7.358352 GCACAATCTTTTCCATACAAGTTTTCG 60.358 37.037 0.00 0.00 0.00 3.46
1593 1925 3.375699 ACTTATCCACCTCCAGTACCTG 58.624 50.000 0.00 0.00 0.00 4.00
1680 2018 6.231211 TCACTTGAAATTCTTGGACCTAGAC 58.769 40.000 5.02 0.00 0.00 2.59
1697 2035 6.496743 ACCTAGACTATTGGTGTGGTAGTTA 58.503 40.000 0.00 0.00 35.52 2.24
1759 2097 3.321396 TGATTTCCATGCTGCAAGTGAAA 59.679 39.130 19.64 19.64 35.30 2.69
1778 2116 4.576053 TGAAATCCACTCCAATATTCGCAG 59.424 41.667 0.00 0.00 0.00 5.18
1902 2240 1.337387 GGAGGACTGACTATACGTGGC 59.663 57.143 0.00 0.00 0.00 5.01
1966 2304 5.972107 ACTGATGTTGAAAAGGAATCTGG 57.028 39.130 0.00 0.00 0.00 3.86
1974 2312 6.183361 TGTTGAAAAGGAATCTGGAGGAGTTA 60.183 38.462 0.00 0.00 0.00 2.24
1991 2332 4.103311 GGAGTTAGAATTACTCTGGGGCAT 59.897 45.833 6.77 0.00 41.37 4.40
2006 2353 2.039084 GGGGCATAGATGGACCAACTAG 59.961 54.545 15.82 9.69 0.00 2.57
2075 2422 8.340618 AGAGTACTTACAATTGCAAATCATGT 57.659 30.769 1.71 9.31 0.00 3.21
2112 2459 2.224606 AGCTGGTTGTGTCTTGACATG 58.775 47.619 6.74 0.00 0.00 3.21
2124 2471 5.741982 GTGTCTTGACATGTGGTTAACAAAC 59.258 40.000 1.15 5.86 43.61 2.93
2160 2507 4.283212 GCTCTAGAAGGCATATCTTGGAGT 59.717 45.833 0.00 0.00 32.79 3.85
2210 2557 2.795329 TCTCAAGGGCCTCAATTTGAC 58.205 47.619 6.46 0.00 0.00 3.18
2214 2561 1.534729 AGGGCCTCAATTTGACGAAC 58.465 50.000 0.00 0.00 0.00 3.95
2296 2643 3.846383 GCGCTTGAAGACAGTTGAGTTTC 60.846 47.826 0.00 0.00 0.00 2.78
2301 2648 5.991328 TGAAGACAGTTGAGTTTCATGAC 57.009 39.130 0.00 0.00 0.00 3.06
2359 2706 4.380843 TGCCATTCCTTTCCAAGTCTTA 57.619 40.909 0.00 0.00 0.00 2.10
2360 2707 4.079253 TGCCATTCCTTTCCAAGTCTTAC 58.921 43.478 0.00 0.00 0.00 2.34
2369 2716 6.710744 TCCTTTCCAAGTCTTACAGAAATCAC 59.289 38.462 5.53 0.00 0.00 3.06
2392 2739 3.972133 TGCATCAATTGTCCCAATCTCT 58.028 40.909 5.13 0.00 0.00 3.10
2408 2755 1.421268 TCTCTGTGTGATGCCCTTGTT 59.579 47.619 0.00 0.00 0.00 2.83
2409 2756 1.538512 CTCTGTGTGATGCCCTTGTTG 59.461 52.381 0.00 0.00 0.00 3.33
2449 2796 6.892310 ATTTGCACAGACTTGAAGTTTTTC 57.108 33.333 0.00 0.00 0.00 2.29
2461 2808 0.750249 AGTTTTTCGTTGCCCCAAGG 59.250 50.000 0.00 0.00 0.00 3.61
2475 2822 1.197430 CCAAGGTGTCTCTGCCCTCT 61.197 60.000 0.00 0.00 0.00 3.69
2503 2850 2.050144 ACACCTCCACACTGACAGATT 58.950 47.619 10.08 0.00 0.00 2.40
2506 2853 2.439507 ACCTCCACACTGACAGATTTGT 59.560 45.455 10.08 0.00 41.18 2.83
2507 2854 3.117888 ACCTCCACACTGACAGATTTGTT 60.118 43.478 10.08 0.00 37.76 2.83
2511 2858 6.207417 CCTCCACACTGACAGATTTGTTTATT 59.793 38.462 10.08 0.00 37.76 1.40
2516 2863 9.169468 CACACTGACAGATTTGTTTATTAACAC 57.831 33.333 10.08 0.00 43.66 3.32
2521 2868 9.562408 TGACAGATTTGTTTATTAACACAGGTA 57.438 29.630 0.00 0.00 43.66 3.08
2538 2885 9.797556 AACACAGGTAATTCAAGAAGTTTTTAC 57.202 29.630 0.00 0.00 0.00 2.01
2539 2886 8.962679 ACACAGGTAATTCAAGAAGTTTTTACA 58.037 29.630 6.45 0.00 0.00 2.41
2540 2887 9.796120 CACAGGTAATTCAAGAAGTTTTTACAA 57.204 29.630 6.45 0.00 0.00 2.41
2549 2896 8.114359 TCAAGAAGTTTTTACAAATTTCTGCG 57.886 30.769 11.48 7.52 44.19 5.18
2550 2897 7.971168 TCAAGAAGTTTTTACAAATTTCTGCGA 59.029 29.630 11.48 9.20 44.19 5.10
2551 2898 7.914537 AGAAGTTTTTACAAATTTCTGCGAG 57.085 32.000 10.32 0.00 43.63 5.03
2552 2899 7.703328 AGAAGTTTTTACAAATTTCTGCGAGA 58.297 30.769 10.32 0.00 43.63 4.04
2558 2905 9.474920 TTTTTACAAATTTCTGCGAGATGATTT 57.525 25.926 0.00 0.00 0.00 2.17
2561 2908 6.789262 ACAAATTTCTGCGAGATGATTTAGG 58.211 36.000 0.00 0.00 0.00 2.69
2563 2910 4.753516 TTTCTGCGAGATGATTTAGGGA 57.246 40.909 0.00 0.00 0.00 4.20
2628 7560 2.037847 GGTGCTTTGGCCTCCCAT 59.962 61.111 3.32 0.00 41.78 4.00
2767 7771 6.541278 TCATCTTACCAGCAAATCATCTTCAG 59.459 38.462 0.00 0.00 0.00 3.02
2772 7776 5.809001 ACCAGCAAATCATCTTCAGAAGTA 58.191 37.500 10.09 0.00 0.00 2.24
2787 7791 7.386848 TCTTCAGAAGTATTAAACTGTTTCCCG 59.613 37.037 9.38 0.00 38.88 5.14
2803 7807 0.250295 CCCGGCTCTTTCTGTGTTGA 60.250 55.000 0.00 0.00 0.00 3.18
2808 7812 3.499918 CGGCTCTTTCTGTGTTGAAGATT 59.500 43.478 0.00 0.00 0.00 2.40
2831 7883 1.770658 TGGCTATGAGGAGGAATGTGG 59.229 52.381 0.00 0.00 0.00 4.17
2885 7943 5.477637 AGGAACTTACCTTCTCAGAGTGTAC 59.522 44.000 0.00 0.00 36.86 2.90
2963 8024 7.970614 GGACAACTCATTGCTCCTAAAATTAAG 59.029 37.037 0.00 0.00 39.66 1.85
3144 8205 6.239430 CCACTCTAAGGCTAATAAGATGCAGA 60.239 42.308 0.00 0.00 0.00 4.26
3147 8208 7.930865 ACTCTAAGGCTAATAAGATGCAGAAAG 59.069 37.037 0.00 0.00 0.00 2.62
3374 8507 3.390135 TCCACACACTTGAATTCGAGTC 58.610 45.455 23.14 0.00 38.50 3.36
3375 8508 2.480419 CCACACACTTGAATTCGAGTCC 59.520 50.000 23.14 0.00 38.50 3.85
3385 8518 3.381590 TGAATTCGAGTCCGATGATGAGT 59.618 43.478 0.04 0.00 45.10 3.41
3469 8861 1.314730 AACATTTTTCGACTGCCGGT 58.685 45.000 1.90 0.00 39.14 5.28
3475 8867 2.709125 TTTCGACTGCCGGTGTCTGG 62.709 60.000 21.30 11.20 39.14 3.86
3487 8879 1.273098 GGTGTCTGGAGTCCCTTCCTA 60.273 57.143 6.74 0.00 38.12 2.94
3522 8914 3.750652 GCCTTTCTTCTCTCAAGGAGTTG 59.249 47.826 1.21 0.00 39.73 3.16
3542 8934 1.332028 GCGTGTCGTTGACTGTCAAAG 60.332 52.381 23.55 24.00 38.22 2.77
3546 8938 4.518217 GTGTCGTTGACTGTCAAAGAATG 58.482 43.478 30.91 14.69 44.10 2.67
3547 8939 4.270084 GTGTCGTTGACTGTCAAAGAATGA 59.730 41.667 30.91 19.32 44.10 2.57
3552 8944 7.063426 GTCGTTGACTGTCAAAGAATGATATCA 59.937 37.037 30.91 8.10 44.10 2.15
3598 8990 3.775202 TCGCTGAGAAAACTAGAGATGC 58.225 45.455 0.00 0.00 0.00 3.91
3607 8999 4.803098 AAACTAGAGATGCGTGGTTACT 57.197 40.909 0.00 0.00 0.00 2.24
3609 9001 2.427453 ACTAGAGATGCGTGGTTACTGG 59.573 50.000 0.00 0.00 0.00 4.00
3611 9003 1.078426 AGATGCGTGGTTACTGGGC 60.078 57.895 0.00 0.00 0.00 5.36
3612 9004 1.078426 GATGCGTGGTTACTGGGCT 60.078 57.895 0.00 0.00 0.00 5.19
3613 9005 1.078426 ATGCGTGGTTACTGGGCTC 60.078 57.895 0.00 0.00 0.00 4.70
3616 9008 1.677552 CGTGGTTACTGGGCTCCTT 59.322 57.895 0.00 0.00 0.00 3.36
3617 9009 0.673644 CGTGGTTACTGGGCTCCTTG 60.674 60.000 0.00 0.00 0.00 3.61
3619 9011 1.378646 GGTTACTGGGCTCCTTGGC 60.379 63.158 0.00 0.00 40.96 4.52
3675 9615 3.640029 ACCCAGATTTATCCGTCACGTAT 59.360 43.478 0.00 0.00 0.00 3.06
3687 9627 3.489738 CCGTCACGTATACCCAAGGTAAG 60.490 52.174 0.00 0.00 41.85 2.34
3705 9645 1.404843 AGACTTGTCGCCTCCCTATC 58.595 55.000 0.00 0.00 0.00 2.08
3710 9651 2.691409 TGTCGCCTCCCTATCTTTTG 57.309 50.000 0.00 0.00 0.00 2.44
3715 9656 4.007659 TCGCCTCCCTATCTTTTGTTTTC 58.992 43.478 0.00 0.00 0.00 2.29
3739 9686 7.788026 TCCTATTTCTGAAGCGAGGTTTATTA 58.212 34.615 11.68 0.00 0.00 0.98
3750 9697 4.392138 GCGAGGTTTATTAGCCATCCATAC 59.608 45.833 0.00 0.00 0.00 2.39
3765 9721 4.412796 TCCATACTTCTGCCTCATCTTG 57.587 45.455 0.00 0.00 0.00 3.02
3770 9726 3.672808 ACTTCTGCCTCATCTTGACTTG 58.327 45.455 0.00 0.00 0.00 3.16
3773 9729 2.634453 TCTGCCTCATCTTGACTTGTCA 59.366 45.455 0.00 0.00 0.00 3.58
3859 9898 2.266554 CGACTCTTCATTCTGCTGACC 58.733 52.381 0.00 0.00 0.00 4.02
3890 9929 7.739911 CAGTGTTGTAAGCTTTTTGTTTGAAAC 59.260 33.333 3.20 0.14 0.00 2.78
3891 9930 7.439655 AGTGTTGTAAGCTTTTTGTTTGAAACA 59.560 29.630 6.66 6.66 40.21 2.83
3892 9931 8.227119 GTGTTGTAAGCTTTTTGTTTGAAACAT 58.773 29.630 11.97 0.00 41.79 2.71
3893 9932 9.424319 TGTTGTAAGCTTTTTGTTTGAAACATA 57.576 25.926 11.97 4.23 41.79 2.29
3919 9959 2.019984 CTTGCTTGCTTCTGTATCCCC 58.980 52.381 0.00 0.00 0.00 4.81
3926 9966 1.616930 TTCTGTATCCCCGGCCCAA 60.617 57.895 0.00 0.00 0.00 4.12
3931 9971 1.462432 TATCCCCGGCCCAATGCTA 60.462 57.895 0.00 0.00 40.92 3.49
3942 9982 3.055891 GGCCCAATGCTAACTTTGTCATT 60.056 43.478 0.00 0.00 40.92 2.57
3949 9989 7.307694 CAATGCTAACTTTGTCATTGCTTCTA 58.692 34.615 0.00 0.00 39.21 2.10
3957 9997 8.169977 ACTTTGTCATTGCTTCTAAATTCTGA 57.830 30.769 0.00 0.00 0.00 3.27
3958 9998 8.078596 ACTTTGTCATTGCTTCTAAATTCTGAC 58.921 33.333 0.00 0.00 33.97 3.51
3959 9999 7.509141 TTGTCATTGCTTCTAAATTCTGACA 57.491 32.000 0.00 0.00 39.76 3.58
3962 10002 5.649395 TCATTGCTTCTAAATTCTGACAGGG 59.351 40.000 1.81 0.00 0.00 4.45
3963 10003 4.908601 TGCTTCTAAATTCTGACAGGGA 57.091 40.909 1.81 0.00 0.00 4.20
3964 10004 5.441718 TGCTTCTAAATTCTGACAGGGAT 57.558 39.130 1.81 0.00 0.00 3.85
3965 10005 6.560003 TGCTTCTAAATTCTGACAGGGATA 57.440 37.500 1.81 0.00 0.00 2.59
3966 10006 6.349300 TGCTTCTAAATTCTGACAGGGATAC 58.651 40.000 1.81 0.00 0.00 2.24
4009 10052 6.430925 TGGACATAAGTTGTGAATCCTTTCAG 59.569 38.462 6.62 0.00 42.41 3.02
4011 10054 5.769662 ACATAAGTTGTGAATCCTTTCAGCA 59.230 36.000 6.62 0.00 42.41 4.41
4015 10058 3.581024 TGTGAATCCTTTCAGCAATGC 57.419 42.857 0.00 0.00 42.41 3.56
4018 10061 4.020928 TGTGAATCCTTTCAGCAATGCAAT 60.021 37.500 8.35 0.00 42.41 3.56
4019 10062 4.565564 GTGAATCCTTTCAGCAATGCAATC 59.434 41.667 8.35 0.00 42.41 2.67
4020 10063 3.814005 ATCCTTTCAGCAATGCAATCC 57.186 42.857 8.35 0.00 0.00 3.01
4023 10066 3.579586 TCCTTTCAGCAATGCAATCCTTT 59.420 39.130 8.35 0.00 0.00 3.11
4024 10067 3.930848 CCTTTCAGCAATGCAATCCTTTC 59.069 43.478 8.35 0.00 0.00 2.62
4025 10068 4.561938 CCTTTCAGCAATGCAATCCTTTCA 60.562 41.667 8.35 0.00 0.00 2.69
4027 10070 2.094390 TCAGCAATGCAATCCTTTCAGC 60.094 45.455 8.35 0.00 0.00 4.26
4029 10072 2.094182 AGCAATGCAATCCTTTCAGCAG 60.094 45.455 8.35 0.00 40.71 4.24
4030 10073 2.353406 GCAATGCAATCCTTTCAGCAGT 60.353 45.455 0.00 0.00 40.71 4.40
4031 10074 3.250744 CAATGCAATCCTTTCAGCAGTG 58.749 45.455 0.00 0.00 44.72 3.66
4032 10075 1.985473 TGCAATCCTTTCAGCAGTGT 58.015 45.000 0.00 0.00 32.48 3.55
4033 10076 1.610038 TGCAATCCTTTCAGCAGTGTG 59.390 47.619 0.00 0.00 32.48 3.82
4043 10102 0.601046 CAGCAGTGTGGACATGTCGT 60.601 55.000 19.33 0.00 0.00 4.34
4054 10113 2.159627 GGACATGTCGTTTGTGGATCAC 59.840 50.000 19.33 0.00 34.56 3.06
4087 10146 6.818142 TGATCGATATTTCTCTGCAACTCAAA 59.182 34.615 0.00 0.00 0.00 2.69
4099 10162 2.227865 GCAACTCAAATCTGCCGGTTAA 59.772 45.455 1.90 0.00 0.00 2.01
4122 10264 4.976864 GGTTAGTACCTCCAGAACCAAAA 58.023 43.478 0.00 0.00 41.53 2.44
4152 10300 8.623903 TGATCCTAAATTTATGACTGCATTCAC 58.376 33.333 9.14 0.00 35.94 3.18
4153 10301 7.015226 TCCTAAATTTATGACTGCATTCACG 57.985 36.000 9.14 0.00 35.94 4.35
4187 10338 7.319646 CAACCACTTTGGCTTGCTTATTTATA 58.680 34.615 0.00 0.00 42.67 0.98
4208 10359 6.890979 ATATTTATCCTGCTTGCTTTCTCC 57.109 37.500 0.00 0.00 0.00 3.71
4209 10360 3.719268 TTATCCTGCTTGCTTTCTCCA 57.281 42.857 0.00 0.00 0.00 3.86
4210 10361 2.822707 ATCCTGCTTGCTTTCTCCAT 57.177 45.000 0.00 0.00 0.00 3.41
4211 10362 2.119801 TCCTGCTTGCTTTCTCCATC 57.880 50.000 0.00 0.00 0.00 3.51
4221 10455 8.213679 TGCTTGCTTTCTCCATCTAGTTTATAT 58.786 33.333 0.00 0.00 0.00 0.86
4262 10500 2.223782 TGCATTCACAGTTCAAGCAACC 60.224 45.455 0.00 0.00 35.28 3.77
4263 10501 2.653890 CATTCACAGTTCAAGCAACCG 58.346 47.619 0.00 0.00 35.28 4.44
4334 10614 5.107109 TGATATGTATGCGTGCATTTTCC 57.893 39.130 14.96 3.38 37.82 3.13
4337 10617 2.431454 TGTATGCGTGCATTTTCCTCA 58.569 42.857 13.20 1.50 37.82 3.86
4342 10622 1.470098 GCGTGCATTTTCCTCATCAGT 59.530 47.619 0.00 0.00 0.00 3.41
4352 10633 3.319137 TCCTCATCAGTTTCTGTTCCG 57.681 47.619 0.00 0.00 32.61 4.30
4355 10636 3.927142 CCTCATCAGTTTCTGTTCCGTAC 59.073 47.826 0.00 0.00 32.61 3.67
4356 10637 4.556233 CTCATCAGTTTCTGTTCCGTACA 58.444 43.478 0.00 0.00 32.61 2.90
4399 10684 0.792640 GACATCACTCACTTGGTGCG 59.207 55.000 0.00 0.00 34.97 5.34
4408 10698 1.278985 TCACTTGGTGCGGATCAAGAT 59.721 47.619 33.08 16.32 42.23 2.40
4417 10707 3.308323 GTGCGGATCAAGATGAAGACTTC 59.692 47.826 8.34 8.34 0.00 3.01
4438 10728 8.320396 ACTTCAGTCATAGCTGCAATAATATG 57.680 34.615 1.02 0.87 36.49 1.78
4459 10771 0.183492 TTGACAGGCTTGTGCTCCTT 59.817 50.000 6.05 0.00 37.76 3.36
4531 10843 5.925509 TGGCATCAGTAGGAGGTATTTAAC 58.074 41.667 0.00 0.00 0.00 2.01
4535 10847 6.686632 GCATCAGTAGGAGGTATTTAACTGCT 60.687 42.308 2.15 2.15 38.91 4.24
4536 10848 6.222038 TCAGTAGGAGGTATTTAACTGCTG 57.778 41.667 6.90 0.00 41.34 4.41
4537 10849 5.720041 TCAGTAGGAGGTATTTAACTGCTGT 59.280 40.000 6.90 0.00 40.96 4.40
4539 10851 7.398047 TCAGTAGGAGGTATTTAACTGCTGTTA 59.602 37.037 11.72 11.72 40.96 2.41
4540 10852 8.204836 CAGTAGGAGGTATTTAACTGCTGTTAT 58.795 37.037 15.83 6.94 38.31 1.89
4544 10856 9.969001 AGGAGGTATTTAACTGCTGTTATTAAA 57.031 29.630 15.83 10.36 38.31 1.52
4569 10881 9.535878 AAAAATATTTGCTTTTCTTACCACGAA 57.464 25.926 0.39 0.00 0.00 3.85
4570 10882 9.705290 AAAATATTTGCTTTTCTTACCACGAAT 57.295 25.926 0.39 0.00 0.00 3.34
4571 10883 8.911247 AATATTTGCTTTTCTTACCACGAATC 57.089 30.769 0.00 0.00 0.00 2.52
4572 10884 5.759506 TTTGCTTTTCTTACCACGAATCA 57.240 34.783 0.00 0.00 0.00 2.57
4573 10885 5.759506 TTGCTTTTCTTACCACGAATCAA 57.240 34.783 0.00 0.00 0.00 2.57
4574 10886 5.356882 TGCTTTTCTTACCACGAATCAAG 57.643 39.130 0.00 0.00 0.00 3.02
4575 10887 4.819630 TGCTTTTCTTACCACGAATCAAGT 59.180 37.500 0.00 0.00 0.00 3.16
4576 10888 5.147162 GCTTTTCTTACCACGAATCAAGTG 58.853 41.667 0.00 0.00 39.19 3.16
4577 10889 4.742438 TTTCTTACCACGAATCAAGTGC 57.258 40.909 0.00 0.00 38.22 4.40
4578 10890 3.678056 TCTTACCACGAATCAAGTGCT 57.322 42.857 0.00 0.00 38.22 4.40
4579 10891 4.002906 TCTTACCACGAATCAAGTGCTT 57.997 40.909 0.00 0.00 38.22 3.91
4580 10892 4.385825 TCTTACCACGAATCAAGTGCTTT 58.614 39.130 0.00 0.00 38.22 3.51
4581 10893 5.543714 TCTTACCACGAATCAAGTGCTTTA 58.456 37.500 0.00 0.00 38.22 1.85
4582 10894 5.992829 TCTTACCACGAATCAAGTGCTTTAA 59.007 36.000 0.00 0.00 38.22 1.52
4583 10895 6.653320 TCTTACCACGAATCAAGTGCTTTAAT 59.347 34.615 0.00 0.00 38.22 1.40
4584 10896 5.705609 ACCACGAATCAAGTGCTTTAATT 57.294 34.783 0.00 0.00 38.22 1.40
4585 10897 6.084326 ACCACGAATCAAGTGCTTTAATTT 57.916 33.333 0.00 0.00 38.22 1.82
4586 10898 6.149633 ACCACGAATCAAGTGCTTTAATTTC 58.850 36.000 0.00 0.00 38.22 2.17
4587 10899 5.572896 CCACGAATCAAGTGCTTTAATTTCC 59.427 40.000 0.00 0.00 38.22 3.13
4588 10900 6.381801 CACGAATCAAGTGCTTTAATTTCCT 58.618 36.000 0.00 0.00 32.52 3.36
4589 10901 6.863126 CACGAATCAAGTGCTTTAATTTCCTT 59.137 34.615 0.00 0.00 32.52 3.36
4590 10902 7.382218 CACGAATCAAGTGCTTTAATTTCCTTT 59.618 33.333 0.00 0.00 32.52 3.11
4591 10903 7.926018 ACGAATCAAGTGCTTTAATTTCCTTTT 59.074 29.630 0.00 0.00 0.00 2.27
4592 10904 9.405587 CGAATCAAGTGCTTTAATTTCCTTTTA 57.594 29.630 0.00 0.00 0.00 1.52
4596 10908 9.528018 TCAAGTGCTTTAATTTCCTTTTACTTG 57.472 29.630 0.00 0.00 41.35 3.16
4597 10909 9.528018 CAAGTGCTTTAATTTCCTTTTACTTGA 57.472 29.630 0.00 0.00 42.10 3.02
4601 10913 9.705290 TGCTTTAATTTCCTTTTACTTGAATCC 57.295 29.630 0.00 0.00 0.00 3.01
4602 10914 9.929180 GCTTTAATTTCCTTTTACTTGAATCCT 57.071 29.630 0.00 0.00 0.00 3.24
4610 10922 9.762933 TTCCTTTTACTTGAATCCTTTCATTTG 57.237 29.630 0.00 0.00 41.38 2.32
4611 10923 9.142014 TCCTTTTACTTGAATCCTTTCATTTGA 57.858 29.630 0.00 0.00 41.38 2.69
4612 10924 9.933723 CCTTTTACTTGAATCCTTTCATTTGAT 57.066 29.630 0.00 0.00 41.38 2.57
4622 10934 4.581824 TCCTTTCATTTGATAGGATGCTGC 59.418 41.667 13.69 0.00 43.96 5.25
4623 10935 4.583489 CCTTTCATTTGATAGGATGCTGCT 59.417 41.667 10.52 0.00 43.29 4.24
4624 10936 5.068723 CCTTTCATTTGATAGGATGCTGCTT 59.931 40.000 10.52 0.00 43.29 3.91
4625 10937 6.406624 CCTTTCATTTGATAGGATGCTGCTTT 60.407 38.462 10.52 0.00 43.29 3.51
4626 10938 5.509716 TCATTTGATAGGATGCTGCTTTG 57.490 39.130 0.00 0.00 0.00 2.77
4627 10939 4.951715 TCATTTGATAGGATGCTGCTTTGT 59.048 37.500 0.00 0.00 0.00 2.83
4628 10940 6.121590 TCATTTGATAGGATGCTGCTTTGTA 58.878 36.000 0.00 0.00 0.00 2.41
4629 10941 6.602803 TCATTTGATAGGATGCTGCTTTGTAA 59.397 34.615 0.00 0.00 0.00 2.41
4630 10942 6.832520 TTTGATAGGATGCTGCTTTGTAAA 57.167 33.333 0.00 0.00 0.00 2.01
4631 10943 6.441093 TTGATAGGATGCTGCTTTGTAAAG 57.559 37.500 0.00 0.05 39.03 1.85
4632 10944 4.883585 TGATAGGATGCTGCTTTGTAAAGG 59.116 41.667 0.00 0.00 36.53 3.11
4645 10957 7.969536 GCTTTGTAAAGGCTCATATATCAGA 57.030 36.000 6.50 0.00 46.52 3.27
4646 10958 8.558973 GCTTTGTAAAGGCTCATATATCAGAT 57.441 34.615 6.50 0.00 46.52 2.90
4647 10959 9.658799 GCTTTGTAAAGGCTCATATATCAGATA 57.341 33.333 6.50 0.00 46.52 1.98
4663 10975 8.938801 ATATCAGATATATGTAGCAGAGAGGG 57.061 38.462 0.54 0.00 0.00 4.30
4664 10976 4.952957 TCAGATATATGTAGCAGAGAGGGC 59.047 45.833 0.00 0.00 0.00 5.19
4665 10977 4.955450 CAGATATATGTAGCAGAGAGGGCT 59.045 45.833 0.00 0.00 45.18 5.19
4666 10978 4.955450 AGATATATGTAGCAGAGAGGGCTG 59.045 45.833 0.00 0.00 42.62 4.85
4667 10979 2.461300 TATGTAGCAGAGAGGGCTGT 57.539 50.000 0.00 0.00 42.62 4.40
4668 10980 1.118838 ATGTAGCAGAGAGGGCTGTC 58.881 55.000 0.00 0.00 42.62 3.51
4669 10981 0.040351 TGTAGCAGAGAGGGCTGTCT 59.960 55.000 0.00 0.00 42.62 3.41
4670 10982 1.190643 GTAGCAGAGAGGGCTGTCTT 58.809 55.000 0.00 0.00 42.62 3.01
4671 10983 1.136110 GTAGCAGAGAGGGCTGTCTTC 59.864 57.143 0.00 0.00 42.62 2.87
4672 10984 0.252193 AGCAGAGAGGGCTGTCTTCT 60.252 55.000 0.00 0.00 40.80 2.85
4673 10985 0.612744 GCAGAGAGGGCTGTCTTCTT 59.387 55.000 0.00 0.00 38.17 2.52
4674 10986 1.675415 GCAGAGAGGGCTGTCTTCTTG 60.675 57.143 0.00 0.00 38.17 3.02
4675 10987 1.622811 CAGAGAGGGCTGTCTTCTTGT 59.377 52.381 0.00 0.00 30.03 3.16
4676 10988 1.899142 AGAGAGGGCTGTCTTCTTGTC 59.101 52.381 0.00 0.00 27.62 3.18
4677 10989 1.899142 GAGAGGGCTGTCTTCTTGTCT 59.101 52.381 0.00 0.00 0.00 3.41
4678 10990 2.301583 GAGAGGGCTGTCTTCTTGTCTT 59.698 50.000 0.00 0.00 0.00 3.01
4679 10991 2.038295 AGAGGGCTGTCTTCTTGTCTTG 59.962 50.000 0.00 0.00 0.00 3.02
4680 10992 1.072965 AGGGCTGTCTTCTTGTCTTGG 59.927 52.381 0.00 0.00 0.00 3.61
4681 10993 1.202818 GGGCTGTCTTCTTGTCTTGGT 60.203 52.381 0.00 0.00 0.00 3.67
4682 10994 1.876156 GGCTGTCTTCTTGTCTTGGTG 59.124 52.381 0.00 0.00 0.00 4.17
4683 10995 1.876156 GCTGTCTTCTTGTCTTGGTGG 59.124 52.381 0.00 0.00 0.00 4.61
4684 10996 2.746472 GCTGTCTTCTTGTCTTGGTGGT 60.746 50.000 0.00 0.00 0.00 4.16
4685 10997 2.874701 CTGTCTTCTTGTCTTGGTGGTG 59.125 50.000 0.00 0.00 0.00 4.17
4686 10998 1.604278 GTCTTCTTGTCTTGGTGGTGC 59.396 52.381 0.00 0.00 0.00 5.01
4687 10999 1.211703 TCTTCTTGTCTTGGTGGTGCA 59.788 47.619 0.00 0.00 0.00 4.57
4688 11000 2.158623 TCTTCTTGTCTTGGTGGTGCAT 60.159 45.455 0.00 0.00 0.00 3.96
4689 11001 2.363306 TCTTGTCTTGGTGGTGCATT 57.637 45.000 0.00 0.00 0.00 3.56
4690 11002 2.665165 TCTTGTCTTGGTGGTGCATTT 58.335 42.857 0.00 0.00 0.00 2.32
4691 11003 3.826524 TCTTGTCTTGGTGGTGCATTTA 58.173 40.909 0.00 0.00 0.00 1.40
4692 11004 4.406456 TCTTGTCTTGGTGGTGCATTTAT 58.594 39.130 0.00 0.00 0.00 1.40
4693 11005 4.832266 TCTTGTCTTGGTGGTGCATTTATT 59.168 37.500 0.00 0.00 0.00 1.40
4694 11006 5.304101 TCTTGTCTTGGTGGTGCATTTATTT 59.696 36.000 0.00 0.00 0.00 1.40
4695 11007 4.880759 TGTCTTGGTGGTGCATTTATTTG 58.119 39.130 0.00 0.00 0.00 2.32
4696 11008 3.679502 GTCTTGGTGGTGCATTTATTTGC 59.320 43.478 0.00 0.00 43.07 3.68
4697 11009 3.577848 TCTTGGTGGTGCATTTATTTGCT 59.422 39.130 0.00 0.00 43.18 3.91
4698 11010 4.040217 TCTTGGTGGTGCATTTATTTGCTT 59.960 37.500 0.00 0.00 43.18 3.91
4699 11011 4.348863 TGGTGGTGCATTTATTTGCTTT 57.651 36.364 0.00 0.00 43.18 3.51
4700 11012 5.474578 TGGTGGTGCATTTATTTGCTTTA 57.525 34.783 0.00 0.00 43.18 1.85
4701 11013 5.233988 TGGTGGTGCATTTATTTGCTTTAC 58.766 37.500 0.00 0.00 43.18 2.01
4702 11014 5.221521 TGGTGGTGCATTTATTTGCTTTACA 60.222 36.000 0.00 0.00 43.18 2.41
4703 11015 5.348451 GGTGGTGCATTTATTTGCTTTACAG 59.652 40.000 0.00 0.00 43.18 2.74
4704 11016 6.155827 GTGGTGCATTTATTTGCTTTACAGA 58.844 36.000 0.00 0.00 43.18 3.41
4705 11017 6.644592 GTGGTGCATTTATTTGCTTTACAGAA 59.355 34.615 0.00 0.00 43.18 3.02
4706 11018 7.331687 GTGGTGCATTTATTTGCTTTACAGAAT 59.668 33.333 0.00 0.00 43.18 2.40
4707 11019 7.331440 TGGTGCATTTATTTGCTTTACAGAATG 59.669 33.333 0.00 0.00 43.18 2.67
4708 11020 7.201548 GGTGCATTTATTTGCTTTACAGAATGG 60.202 37.037 0.00 0.00 41.63 3.16
4709 11021 7.331687 GTGCATTTATTTGCTTTACAGAATGGT 59.668 33.333 0.00 0.00 41.63 3.55
4710 11022 8.526978 TGCATTTATTTGCTTTACAGAATGGTA 58.473 29.630 0.00 0.00 41.63 3.25
4711 11023 9.533253 GCATTTATTTGCTTTACAGAATGGTAT 57.467 29.630 0.00 0.00 39.16 2.73
4714 11026 8.815565 TTATTTGCTTTACAGAATGGTATGGA 57.184 30.769 0.00 0.00 43.62 3.41
4715 11027 7.902920 ATTTGCTTTACAGAATGGTATGGAT 57.097 32.000 0.00 0.00 43.62 3.41
4716 11028 6.698008 TTGCTTTACAGAATGGTATGGATG 57.302 37.500 0.00 0.00 43.62 3.51
4717 11029 5.754782 TGCTTTACAGAATGGTATGGATGT 58.245 37.500 0.00 0.00 43.62 3.06
4718 11030 6.894682 TGCTTTACAGAATGGTATGGATGTA 58.105 36.000 0.00 0.00 43.62 2.29
4719 11031 7.342581 TGCTTTACAGAATGGTATGGATGTAA 58.657 34.615 0.00 0.00 43.62 2.41
4720 11032 7.282224 TGCTTTACAGAATGGTATGGATGTAAC 59.718 37.037 0.00 0.00 43.62 2.50
4721 11033 7.255139 GCTTTACAGAATGGTATGGATGTAACC 60.255 40.741 0.00 0.00 43.62 2.85
4722 11034 5.975988 ACAGAATGGTATGGATGTAACCT 57.024 39.130 0.00 0.00 43.62 3.50
4723 11035 6.327386 ACAGAATGGTATGGATGTAACCTT 57.673 37.500 0.00 0.00 43.62 3.50
4724 11036 6.357367 ACAGAATGGTATGGATGTAACCTTC 58.643 40.000 0.00 0.00 43.62 3.46
4725 11037 5.765182 CAGAATGGTATGGATGTAACCTTCC 59.235 44.000 0.00 0.00 35.85 3.46
4726 11038 5.672194 AGAATGGTATGGATGTAACCTTCCT 59.328 40.000 0.00 0.00 36.20 3.36
4727 11039 6.849697 AGAATGGTATGGATGTAACCTTCCTA 59.150 38.462 0.00 0.00 36.20 2.94
4728 11040 5.881923 TGGTATGGATGTAACCTTCCTAC 57.118 43.478 0.00 0.00 36.20 3.18
4729 11041 5.535029 TGGTATGGATGTAACCTTCCTACT 58.465 41.667 0.00 0.00 36.20 2.57
4730 11042 6.685541 TGGTATGGATGTAACCTTCCTACTA 58.314 40.000 0.00 0.00 36.20 1.82
4731 11043 7.310634 TGGTATGGATGTAACCTTCCTACTAT 58.689 38.462 0.00 0.00 36.20 2.12
4732 11044 7.792736 TGGTATGGATGTAACCTTCCTACTATT 59.207 37.037 0.00 0.00 36.20 1.73
4733 11045 9.317827 GGTATGGATGTAACCTTCCTACTATTA 57.682 37.037 0.00 0.00 36.20 0.98
4737 11049 9.220906 TGGATGTAACCTTCCTACTATTATTGT 57.779 33.333 0.00 0.00 36.20 2.71
4738 11050 9.490379 GGATGTAACCTTCCTACTATTATTGTG 57.510 37.037 0.00 0.00 33.22 3.33
4744 11056 8.375493 ACCTTCCTACTATTATTGTGAAGTGA 57.625 34.615 0.00 0.00 0.00 3.41
4745 11057 8.822805 ACCTTCCTACTATTATTGTGAAGTGAA 58.177 33.333 0.00 0.00 0.00 3.18
4746 11058 9.667107 CCTTCCTACTATTATTGTGAAGTGAAA 57.333 33.333 0.00 0.00 0.00 2.69
4760 11072 9.897744 TTGTGAAGTGAAATTGAATTGAGATAC 57.102 29.630 0.00 0.00 0.00 2.24
4761 11073 9.065798 TGTGAAGTGAAATTGAATTGAGATACA 57.934 29.630 0.00 0.00 0.00 2.29
4762 11074 9.334693 GTGAAGTGAAATTGAATTGAGATACAC 57.665 33.333 0.00 0.00 0.00 2.90
4763 11075 9.288576 TGAAGTGAAATTGAATTGAGATACACT 57.711 29.630 0.00 0.00 36.63 3.55
4764 11076 9.766277 GAAGTGAAATTGAATTGAGATACACTC 57.234 33.333 0.00 0.00 45.11 3.51
4765 11077 9.512588 AAGTGAAATTGAATTGAGATACACTCT 57.487 29.630 0.00 0.00 45.13 3.24
4768 11080 9.942850 TGAAATTGAATTGAGATACACTCTACA 57.057 29.630 0.00 0.00 45.13 2.74
4771 11083 8.954950 ATTGAATTGAGATACACTCTACAAGG 57.045 34.615 0.00 0.00 45.13 3.61
4772 11084 6.878317 TGAATTGAGATACACTCTACAAGGG 58.122 40.000 0.00 0.00 45.13 3.95
4773 11085 6.667848 TGAATTGAGATACACTCTACAAGGGA 59.332 38.462 0.00 0.00 45.13 4.20
4774 11086 6.723298 ATTGAGATACACTCTACAAGGGAG 57.277 41.667 0.00 0.00 45.13 4.30
4775 11087 5.452341 TGAGATACACTCTACAAGGGAGA 57.548 43.478 0.00 0.00 45.13 3.71
4776 11088 5.827756 TGAGATACACTCTACAAGGGAGAA 58.172 41.667 0.00 0.00 45.13 2.87
4777 11089 6.436027 TGAGATACACTCTACAAGGGAGAAT 58.564 40.000 0.00 0.00 45.13 2.40
4778 11090 6.322456 TGAGATACACTCTACAAGGGAGAATG 59.678 42.308 0.00 0.00 45.13 2.67
4779 11091 3.618690 ACACTCTACAAGGGAGAATGC 57.381 47.619 0.00 0.00 35.10 3.56
4780 11092 3.177228 ACACTCTACAAGGGAGAATGCT 58.823 45.455 0.00 0.00 35.10 3.79
4781 11093 3.584848 ACACTCTACAAGGGAGAATGCTT 59.415 43.478 0.00 0.00 35.10 3.91
4782 11094 4.187694 CACTCTACAAGGGAGAATGCTTC 58.812 47.826 0.00 0.00 35.10 3.86
4783 11095 3.198853 ACTCTACAAGGGAGAATGCTTCC 59.801 47.826 0.00 0.00 40.47 3.46
4784 11096 2.505819 TCTACAAGGGAGAATGCTTCCC 59.494 50.000 0.00 2.00 41.16 3.97
4785 11097 1.075601 ACAAGGGAGAATGCTTCCCA 58.924 50.000 12.53 0.00 45.90 4.37
4786 11098 1.428912 ACAAGGGAGAATGCTTCCCAA 59.571 47.619 12.53 0.00 45.90 4.12
4787 11099 2.043526 ACAAGGGAGAATGCTTCCCAAT 59.956 45.455 12.53 0.00 45.90 3.16
4788 11100 3.269381 ACAAGGGAGAATGCTTCCCAATA 59.731 43.478 12.53 0.00 45.90 1.90
4789 11101 4.078980 ACAAGGGAGAATGCTTCCCAATAT 60.079 41.667 12.53 0.00 45.90 1.28
4790 11102 4.821532 AGGGAGAATGCTTCCCAATATT 57.178 40.909 12.53 0.00 45.90 1.28
4791 11103 5.148225 AGGGAGAATGCTTCCCAATATTT 57.852 39.130 12.53 0.00 45.90 1.40
4792 11104 4.897670 AGGGAGAATGCTTCCCAATATTTG 59.102 41.667 12.53 0.00 45.90 2.32
4793 11105 4.651045 GGGAGAATGCTTCCCAATATTTGT 59.349 41.667 5.45 0.00 43.06 2.83
4794 11106 5.129320 GGGAGAATGCTTCCCAATATTTGTT 59.871 40.000 5.45 0.00 43.06 2.83
4795 11107 6.352137 GGGAGAATGCTTCCCAATATTTGTTT 60.352 38.462 5.45 0.00 43.06 2.83
4796 11108 6.536224 GGAGAATGCTTCCCAATATTTGTTTG 59.464 38.462 0.00 0.00 0.00 2.93
4797 11109 7.243604 AGAATGCTTCCCAATATTTGTTTGA 57.756 32.000 0.00 0.00 0.00 2.69
4798 11110 7.854337 AGAATGCTTCCCAATATTTGTTTGAT 58.146 30.769 0.00 0.00 0.00 2.57
4799 11111 8.323567 AGAATGCTTCCCAATATTTGTTTGATT 58.676 29.630 0.00 0.00 0.00 2.57
4800 11112 8.496707 AATGCTTCCCAATATTTGTTTGATTC 57.503 30.769 0.00 0.00 0.00 2.52
4801 11113 7.243604 TGCTTCCCAATATTTGTTTGATTCT 57.756 32.000 0.00 0.00 0.00 2.40
4802 11114 7.678837 TGCTTCCCAATATTTGTTTGATTCTT 58.321 30.769 0.00 0.00 0.00 2.52
4803 11115 7.603404 TGCTTCCCAATATTTGTTTGATTCTTG 59.397 33.333 0.00 0.00 0.00 3.02
4804 11116 7.818930 GCTTCCCAATATTTGTTTGATTCTTGA 59.181 33.333 0.00 0.00 0.00 3.02
4805 11117 9.709495 CTTCCCAATATTTGTTTGATTCTTGAA 57.291 29.630 0.00 0.00 0.00 2.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.841881 TCCCTATTGGTCTTGGGTGTAC 59.158 50.000 0.00 0.00 40.48 2.90
1 2 3.208570 TCCCTATTGGTCTTGGGTGTA 57.791 47.619 0.00 0.00 40.48 2.90
2 3 2.053747 TCCCTATTGGTCTTGGGTGT 57.946 50.000 0.00 0.00 40.48 4.16
3 4 2.423373 CCATCCCTATTGGTCTTGGGTG 60.423 54.545 0.00 0.00 40.48 4.61
4 5 1.852965 CCATCCCTATTGGTCTTGGGT 59.147 52.381 0.00 0.00 40.48 4.51
5 6 1.852965 ACCATCCCTATTGGTCTTGGG 59.147 52.381 9.81 0.00 44.15 4.12
6 7 2.423373 CCACCATCCCTATTGGTCTTGG 60.423 54.545 0.00 5.24 45.71 3.61
7 8 2.242196 ACCACCATCCCTATTGGTCTTG 59.758 50.000 0.00 0.00 45.71 3.02
8 9 2.242196 CACCACCATCCCTATTGGTCTT 59.758 50.000 0.00 0.00 45.71 3.01
9 10 1.846439 CACCACCATCCCTATTGGTCT 59.154 52.381 0.00 0.00 45.71 3.85
10 11 1.843851 TCACCACCATCCCTATTGGTC 59.156 52.381 0.00 0.00 45.71 4.02
12 13 2.867624 CATCACCACCATCCCTATTGG 58.132 52.381 0.00 0.00 40.26 3.16
13 14 2.158564 AGCATCACCACCATCCCTATTG 60.159 50.000 0.00 0.00 0.00 1.90
14 15 2.138542 AGCATCACCACCATCCCTATT 58.861 47.619 0.00 0.00 0.00 1.73
15 16 1.422781 CAGCATCACCACCATCCCTAT 59.577 52.381 0.00 0.00 0.00 2.57
16 17 0.839277 CAGCATCACCACCATCCCTA 59.161 55.000 0.00 0.00 0.00 3.53
17 18 1.611419 CAGCATCACCACCATCCCT 59.389 57.895 0.00 0.00 0.00 4.20
18 19 2.123428 GCAGCATCACCACCATCCC 61.123 63.158 0.00 0.00 0.00 3.85
19 20 1.077212 AGCAGCATCACCACCATCC 60.077 57.895 0.00 0.00 0.00 3.51
20 21 2.001361 GCAGCAGCATCACCACCATC 62.001 60.000 0.00 0.00 41.58 3.51
21 22 2.050350 GCAGCAGCATCACCACCAT 61.050 57.895 0.00 0.00 41.58 3.55
22 23 2.674033 GCAGCAGCATCACCACCA 60.674 61.111 0.00 0.00 41.58 4.17
23 24 2.360852 AGCAGCAGCATCACCACC 60.361 61.111 3.17 0.00 45.49 4.61
24 25 2.875485 CAGCAGCAGCATCACCAC 59.125 61.111 3.17 0.00 45.49 4.16
25 26 3.060000 GCAGCAGCAGCATCACCA 61.060 61.111 4.63 0.00 45.49 4.17
26 27 2.750637 AGCAGCAGCAGCATCACC 60.751 61.111 12.92 0.00 45.49 4.02
27 28 2.485582 CAGCAGCAGCAGCATCAC 59.514 61.111 12.92 0.00 45.49 3.06
33 34 2.255554 CAACAGCAGCAGCAGCAG 59.744 61.111 12.92 6.60 45.49 4.24
34 35 3.973516 GCAACAGCAGCAGCAGCA 61.974 61.111 12.92 0.00 45.49 4.41
35 36 4.719369 GGCAACAGCAGCAGCAGC 62.719 66.667 3.17 0.46 45.49 5.25
36 37 3.292159 TGGCAACAGCAGCAGCAG 61.292 61.111 3.17 0.00 46.17 4.24
52 53 4.969196 ACGTGGCGTGGTGCTCTG 62.969 66.667 0.00 0.00 45.43 3.35
53 54 4.664677 GACGTGGCGTGGTGCTCT 62.665 66.667 0.00 0.00 41.37 4.09
54 55 4.961511 TGACGTGGCGTGGTGCTC 62.962 66.667 0.00 0.00 41.37 4.26
57 58 4.901123 TGGTGACGTGGCGTGGTG 62.901 66.667 0.00 0.00 41.37 4.17
58 59 4.164087 TTGGTGACGTGGCGTGGT 62.164 61.111 0.00 0.00 41.37 4.16
59 60 3.645975 GTTGGTGACGTGGCGTGG 61.646 66.667 0.00 0.00 41.37 4.94
60 61 2.587753 AGTTGGTGACGTGGCGTG 60.588 61.111 0.00 0.00 41.37 5.34
61 62 2.279918 GAGTTGGTGACGTGGCGT 60.280 61.111 0.00 0.00 45.10 5.68
62 63 3.041940 GGAGTTGGTGACGTGGCG 61.042 66.667 0.00 0.00 0.00 5.69
63 64 1.961277 CTGGAGTTGGTGACGTGGC 60.961 63.158 0.00 0.00 0.00 5.01
64 65 0.179056 AACTGGAGTTGGTGACGTGG 60.179 55.000 0.00 0.00 36.80 4.94
65 66 1.202533 AGAACTGGAGTTGGTGACGTG 60.203 52.381 0.00 0.00 38.56 4.49
66 67 1.120530 AGAACTGGAGTTGGTGACGT 58.879 50.000 0.00 0.00 38.56 4.34
67 68 1.502231 CAGAACTGGAGTTGGTGACG 58.498 55.000 0.00 0.00 38.56 4.35
68 69 1.202698 AGCAGAACTGGAGTTGGTGAC 60.203 52.381 0.00 0.00 38.56 3.67
69 70 1.131638 AGCAGAACTGGAGTTGGTGA 58.868 50.000 0.00 0.00 38.56 4.02
70 71 2.037772 AGTAGCAGAACTGGAGTTGGTG 59.962 50.000 0.00 0.00 38.56 4.17
71 72 2.037772 CAGTAGCAGAACTGGAGTTGGT 59.962 50.000 0.00 0.00 42.63 3.67
72 73 2.693069 CAGTAGCAGAACTGGAGTTGG 58.307 52.381 0.00 0.00 42.63 3.77
73 74 2.072298 GCAGTAGCAGAACTGGAGTTG 58.928 52.381 13.63 0.00 45.75 3.16
74 75 1.974236 AGCAGTAGCAGAACTGGAGTT 59.026 47.619 13.63 0.00 45.75 3.01
75 76 1.274728 CAGCAGTAGCAGAACTGGAGT 59.725 52.381 13.63 0.00 45.75 3.85
76 77 2.006056 GCAGCAGTAGCAGAACTGGAG 61.006 57.143 13.63 0.00 45.75 3.86
77 78 0.036952 GCAGCAGTAGCAGAACTGGA 60.037 55.000 13.63 0.00 45.75 3.86
78 79 0.036577 AGCAGCAGTAGCAGAACTGG 60.037 55.000 13.63 2.32 45.75 4.00
80 81 0.673022 GCAGCAGCAGTAGCAGAACT 60.673 55.000 0.00 0.00 45.49 3.01
81 82 0.673022 AGCAGCAGCAGTAGCAGAAC 60.673 55.000 3.17 0.00 45.49 3.01
82 83 0.672711 CAGCAGCAGCAGTAGCAGAA 60.673 55.000 3.17 0.00 45.49 3.02
83 84 1.079336 CAGCAGCAGCAGTAGCAGA 60.079 57.895 3.17 0.00 45.49 4.26
84 85 0.954449 AACAGCAGCAGCAGTAGCAG 60.954 55.000 3.17 0.00 45.49 4.24
89 90 3.292936 GGCAACAGCAGCAGCAGT 61.293 61.111 3.17 0.00 45.49 4.40
111 112 0.839946 AGCAGAGTTGGAGTTGGTGT 59.160 50.000 0.00 0.00 0.00 4.16
225 238 1.202915 TGCTGAGCAAATTGGAGACCA 60.203 47.619 3.81 0.00 34.76 4.02
276 325 1.142748 CCAGTCTGAGGCCGATGTC 59.857 63.158 0.00 0.00 0.00 3.06
309 358 2.679837 GTCCTGCCATACAATGTGTCTG 59.320 50.000 0.00 0.00 0.00 3.51
386 453 7.037586 TGGACCAACTATAGGAAGAACAGAAAT 60.038 37.037 4.43 0.00 0.00 2.17
630 727 0.318699 CTTGGACTTGAGACGTCGCA 60.319 55.000 18.48 18.48 32.24 5.10
670 767 4.143115 GCACCGTCACATTTCCATATATCG 60.143 45.833 0.00 0.00 0.00 2.92
693 790 3.146104 ACAGGGTTTTCCACTGATCAG 57.854 47.619 21.37 21.37 42.91 2.90
694 791 3.593442 AACAGGGTTTTCCACTGATCA 57.407 42.857 0.00 0.00 42.91 2.92
725 822 0.324614 CCTTTGGTTTCCCCCATTGC 59.675 55.000 0.00 0.00 33.60 3.56
729 826 0.471022 GCTTCCTTTGGTTTCCCCCA 60.471 55.000 0.00 0.00 0.00 4.96
778 875 4.067896 CTGTTTTCACCATGTCTGCTACT 58.932 43.478 0.00 0.00 0.00 2.57
850 953 8.469309 AGCTACCAAATATACATGCTTCAAAT 57.531 30.769 0.00 0.00 0.00 2.32
906 1076 3.381908 AGTCCTTCTGCAATAGTCTACCG 59.618 47.826 0.00 0.00 0.00 4.02
928 1098 6.550854 ACTCCATTCCAATGTTTCTGAGAAAA 59.449 34.615 9.51 1.06 34.60 2.29
1026 1268 6.642733 TTCTTCAGATCAAAAGGGAGGTAT 57.357 37.500 0.00 0.00 0.00 2.73
1131 1373 6.183361 TGGCTTGCTGATTAGAGTCTATGATT 60.183 38.462 0.00 0.00 0.00 2.57
1217 1522 4.636206 GCATTAAATAGGGGGATCGATCAC 59.364 45.833 25.93 23.05 0.00 3.06
1423 1728 4.736126 TCATCAAAGTCCGCAGATTAGA 57.264 40.909 0.00 0.00 0.00 2.10
1533 1865 4.036734 GGAAAAGATTGTGCAGACTTCACA 59.963 41.667 3.64 3.64 42.10 3.58
1562 1894 5.001874 GGAGGTGGATAAGTTTCGAAAACT 58.998 41.667 13.10 9.44 0.00 2.66
1569 1901 4.470304 AGGTACTGGAGGTGGATAAGTTTC 59.530 45.833 0.00 0.00 37.18 2.78
1593 1925 9.774742 CCACTTATGTAAGCTGAACTAATTTTC 57.225 33.333 0.00 0.00 36.79 2.29
1615 1953 6.435292 ACTAGGTAAACTGATTTCACCACT 57.565 37.500 0.00 0.00 30.19 4.00
1616 1954 7.117379 GTGTACTAGGTAAACTGATTTCACCAC 59.883 40.741 0.00 0.00 30.19 4.16
1680 2018 7.417612 GCAAATCATAACTACCACACCAATAG 58.582 38.462 0.00 0.00 0.00 1.73
1697 2035 4.400567 GGCTAAAGTCTTCAGGCAAATCAT 59.599 41.667 4.41 0.00 35.11 2.45
1759 2097 3.845781 ACTGCGAATATTGGAGTGGAT 57.154 42.857 1.09 0.00 36.60 3.41
1778 2116 3.665173 GATGCTTCATCTTTCCGACAC 57.335 47.619 0.00 0.00 37.82 3.67
1902 2240 1.358759 GGTTGCCACGTGTTCAAGG 59.641 57.895 15.65 0.00 0.00 3.61
1966 2304 4.202274 GCCCCAGAGTAATTCTAACTCCTC 60.202 50.000 3.69 0.00 43.64 3.71
1974 2312 4.288105 CCATCTATGCCCCAGAGTAATTCT 59.712 45.833 0.00 0.00 36.25 2.40
1991 2332 4.586421 CAGCATCTCTAGTTGGTCCATCTA 59.414 45.833 8.99 8.99 0.00 1.98
2006 2353 6.167685 AGAGCATCAAGAATATCAGCATCTC 58.832 40.000 0.00 0.00 37.82 2.75
2075 2422 2.238646 CAGCTAGGACCAATGGTACCAA 59.761 50.000 20.76 2.16 37.20 3.67
2112 2459 6.362820 CGAGTCTCTCTAAGTTTGTTAACCAC 59.637 42.308 2.48 0.00 34.71 4.16
2210 2557 4.142534 ACTGATGCATTCCAGAAATGTTCG 60.143 41.667 19.28 0.00 45.55 3.95
2214 2561 4.868171 CCAAACTGATGCATTCCAGAAATG 59.132 41.667 19.28 13.96 46.37 2.32
2296 2643 1.816835 AGCAAGTTCTGGCATGTCATG 59.183 47.619 0.00 8.56 0.00 3.07
2301 2648 2.416836 CCATTCAGCAAGTTCTGGCATG 60.417 50.000 1.92 0.00 34.91 4.06
2359 2706 6.032956 ACAATTGATGCATGTGATTTCTGT 57.967 33.333 13.59 0.00 0.00 3.41
2360 2707 5.518847 GGACAATTGATGCATGTGATTTCTG 59.481 40.000 13.59 0.00 0.00 3.02
2392 2739 0.184692 TCCAACAAGGGCATCACACA 59.815 50.000 0.00 0.00 38.24 3.72
2408 2755 1.595311 ATTGGTGCAGGATACCTCCA 58.405 50.000 0.00 0.00 44.79 3.86
2409 2756 2.689983 CAAATTGGTGCAGGATACCTCC 59.310 50.000 0.00 0.00 42.43 4.30
2432 2779 4.412207 GCAACGAAAAACTTCAAGTCTGT 58.588 39.130 0.00 0.00 0.00 3.41
2449 2796 1.966451 GAGACACCTTGGGGCAACG 60.966 63.158 0.00 0.00 35.63 4.10
2461 2808 0.105778 GGCATAGAGGGCAGAGACAC 59.894 60.000 0.00 0.00 0.00 3.67
2475 2822 0.613260 GTGTGGAGGTGTGAGGCATA 59.387 55.000 0.00 0.00 0.00 3.14
2523 2870 8.591312 CGCAGAAATTTGTAAAAACTTCTTGAA 58.409 29.630 0.00 0.00 0.00 2.69
2524 2871 7.971168 TCGCAGAAATTTGTAAAAACTTCTTGA 59.029 29.630 0.00 0.00 0.00 3.02
2526 2873 8.188139 TCTCGCAGAAATTTGTAAAAACTTCTT 58.812 29.630 0.00 0.00 34.09 2.52
2527 2874 7.703328 TCTCGCAGAAATTTGTAAAAACTTCT 58.297 30.769 0.00 0.00 34.09 2.85
2528 2875 7.908193 TCTCGCAGAAATTTGTAAAAACTTC 57.092 32.000 0.00 0.00 34.09 3.01
2529 2876 8.134895 TCATCTCGCAGAAATTTGTAAAAACTT 58.865 29.630 0.00 0.00 34.09 2.66
2530 2877 7.648142 TCATCTCGCAGAAATTTGTAAAAACT 58.352 30.769 0.00 0.00 34.09 2.66
2531 2878 7.851822 TCATCTCGCAGAAATTTGTAAAAAC 57.148 32.000 0.00 0.00 34.09 2.43
2532 2879 9.474920 AAATCATCTCGCAGAAATTTGTAAAAA 57.525 25.926 0.00 0.00 34.09 1.94
2534 2881 9.773328 CTAAATCATCTCGCAGAAATTTGTAAA 57.227 29.630 0.00 0.00 34.09 2.01
2535 2882 8.397906 CCTAAATCATCTCGCAGAAATTTGTAA 58.602 33.333 0.00 0.00 34.09 2.41
2536 2883 7.012327 CCCTAAATCATCTCGCAGAAATTTGTA 59.988 37.037 0.00 0.00 34.09 2.41
2537 2884 6.183360 CCCTAAATCATCTCGCAGAAATTTGT 60.183 38.462 0.00 0.00 34.09 2.83
2538 2885 6.038603 TCCCTAAATCATCTCGCAGAAATTTG 59.961 38.462 0.00 0.00 34.09 2.32
2539 2886 6.038714 GTCCCTAAATCATCTCGCAGAAATTT 59.961 38.462 0.00 0.00 34.09 1.82
2540 2887 5.529060 GTCCCTAAATCATCTCGCAGAAATT 59.471 40.000 0.00 0.00 34.09 1.82
2541 2888 5.059833 GTCCCTAAATCATCTCGCAGAAAT 58.940 41.667 0.00 0.00 34.09 2.17
2542 2889 4.442706 GTCCCTAAATCATCTCGCAGAAA 58.557 43.478 0.00 0.00 34.09 2.52
2543 2890 3.490933 CGTCCCTAAATCATCTCGCAGAA 60.491 47.826 0.00 0.00 34.09 3.02
2544 2891 2.034685 CGTCCCTAAATCATCTCGCAGA 59.965 50.000 0.00 0.00 0.00 4.26
2545 2892 2.223829 ACGTCCCTAAATCATCTCGCAG 60.224 50.000 0.00 0.00 0.00 5.18
2546 2893 1.754803 ACGTCCCTAAATCATCTCGCA 59.245 47.619 0.00 0.00 0.00 5.10
2547 2894 2.510768 ACGTCCCTAAATCATCTCGC 57.489 50.000 0.00 0.00 0.00 5.03
2548 2895 3.782046 ACAACGTCCCTAAATCATCTCG 58.218 45.455 0.00 0.00 0.00 4.04
2549 2896 4.935808 ACAACAACGTCCCTAAATCATCTC 59.064 41.667 0.00 0.00 0.00 2.75
2550 2897 4.906618 ACAACAACGTCCCTAAATCATCT 58.093 39.130 0.00 0.00 0.00 2.90
2551 2898 4.935808 AGACAACAACGTCCCTAAATCATC 59.064 41.667 0.00 0.00 36.52 2.92
2552 2899 4.906618 AGACAACAACGTCCCTAAATCAT 58.093 39.130 0.00 0.00 36.52 2.45
2558 2905 5.416083 CATCATAAGACAACAACGTCCCTA 58.584 41.667 0.00 0.00 36.52 3.53
2561 2908 4.250464 TCCATCATAAGACAACAACGTCC 58.750 43.478 0.00 0.00 36.52 4.79
2563 2910 5.995282 TCTTTCCATCATAAGACAACAACGT 59.005 36.000 0.00 0.00 0.00 3.99
2767 7771 4.698780 AGCCGGGAAACAGTTTAATACTTC 59.301 41.667 2.18 0.00 33.85 3.01
2772 7776 3.434940 AGAGCCGGGAAACAGTTTAAT 57.565 42.857 2.18 0.00 0.00 1.40
2787 7791 4.516698 TCAATCTTCAACACAGAAAGAGCC 59.483 41.667 0.00 0.00 0.00 4.70
2803 7807 4.237843 TCCTCCTCATAGCCATCAATCTT 58.762 43.478 0.00 0.00 0.00 2.40
2808 7812 3.072038 CACATTCCTCCTCATAGCCATCA 59.928 47.826 0.00 0.00 0.00 3.07
2831 7883 2.621998 CTGGATGATGGGAACTGCATTC 59.378 50.000 0.00 0.00 36.48 2.67
2885 7943 3.365265 GCACAAGAACCAGGCCCG 61.365 66.667 0.00 0.00 0.00 6.13
2963 8024 5.186198 ACAATTGGCCACAGTACTCTATTC 58.814 41.667 3.88 0.00 0.00 1.75
2971 8032 3.146066 GACAGAACAATTGGCCACAGTA 58.854 45.455 3.88 0.00 0.00 2.74
3144 8205 4.710324 TGAATCCGTCCACTGTTAACTTT 58.290 39.130 7.22 0.00 0.00 2.66
3147 8208 4.094442 GGATTGAATCCGTCCACTGTTAAC 59.906 45.833 8.68 0.00 40.13 2.01
3374 8507 2.549563 CCTTCCATCCACTCATCATCGG 60.550 54.545 0.00 0.00 0.00 4.18
3375 8508 2.763933 CCTTCCATCCACTCATCATCG 58.236 52.381 0.00 0.00 0.00 3.84
3385 8518 1.198094 TCCGTGAAGCCTTCCATCCA 61.198 55.000 1.21 0.00 0.00 3.41
3469 8861 3.173965 CTTTAGGAAGGGACTCCAGACA 58.826 50.000 0.00 0.00 38.49 3.41
3522 8914 0.648441 TTTGACAGTCAACGACACGC 59.352 50.000 15.93 0.00 35.89 5.34
3542 8934 4.461781 CCTCCTTGGGCATTGATATCATTC 59.538 45.833 6.17 0.00 0.00 2.67
3598 8990 0.673644 CAAGGAGCCCAGTAACCACG 60.674 60.000 0.00 0.00 0.00 4.94
3607 8999 0.840288 TTGTCTAGCCAAGGAGCCCA 60.840 55.000 0.00 0.00 0.00 5.36
3609 9001 0.746204 GCTTGTCTAGCCAAGGAGCC 60.746 60.000 14.92 0.00 44.48 4.70
3619 9011 7.149569 TGATTTCCTCAATTTGCTTGTCTAG 57.850 36.000 0.00 0.00 36.20 2.43
3637 9029 7.468141 AATCTGGGTAGGTTCTTTTGATTTC 57.532 36.000 0.00 0.00 0.00 2.17
3652 9044 3.025978 ACGTGACGGATAAATCTGGGTA 58.974 45.455 10.66 0.00 37.50 3.69
3675 9615 2.028748 GCGACAAGTCTTACCTTGGGTA 60.029 50.000 5.96 0.00 44.89 3.69
3687 9627 1.404843 AGATAGGGAGGCGACAAGTC 58.595 55.000 0.00 0.00 0.00 3.01
3705 9645 7.138736 TCGCTTCAGAAATAGGAAAACAAAAG 58.861 34.615 0.00 0.00 0.00 2.27
3710 9651 4.695928 ACCTCGCTTCAGAAATAGGAAAAC 59.304 41.667 10.68 0.00 0.00 2.43
3715 9656 6.927294 AATAAACCTCGCTTCAGAAATAGG 57.073 37.500 4.29 4.29 0.00 2.57
3739 9686 1.516110 AGGCAGAAGTATGGATGGCT 58.484 50.000 0.00 0.00 43.01 4.75
3750 9697 3.672808 ACAAGTCAAGATGAGGCAGAAG 58.327 45.455 0.00 0.00 0.00 2.85
3765 9721 5.004726 GTGTGCACAAAAGATTTGACAAGTC 59.995 40.000 23.59 2.59 0.00 3.01
3817 9829 0.107066 TGTATCTCGCACCGGACCTA 60.107 55.000 9.46 0.00 0.00 3.08
3859 9898 7.524294 ACAAAAAGCTTACAACACTGAAATG 57.476 32.000 0.00 0.00 0.00 2.32
3890 9929 3.857665 CAGAAGCAAGCAAGCACATTATG 59.142 43.478 3.19 0.00 36.85 1.90
3891 9930 3.508793 ACAGAAGCAAGCAAGCACATTAT 59.491 39.130 3.19 0.00 36.85 1.28
3892 9931 2.886523 ACAGAAGCAAGCAAGCACATTA 59.113 40.909 3.19 0.00 36.85 1.90
3893 9932 1.684983 ACAGAAGCAAGCAAGCACATT 59.315 42.857 3.19 0.00 36.85 2.71
3894 9933 1.325355 ACAGAAGCAAGCAAGCACAT 58.675 45.000 3.19 0.00 36.85 3.21
3919 9959 0.887933 ACAAAGTTAGCATTGGGCCG 59.112 50.000 0.00 0.00 46.50 6.13
3926 9966 5.972107 AGAAGCAATGACAAAGTTAGCAT 57.028 34.783 0.00 0.00 0.00 3.79
3931 9971 8.632679 TCAGAATTTAGAAGCAATGACAAAGTT 58.367 29.630 0.00 0.00 0.00 2.66
3942 9982 4.908601 TCCCTGTCAGAATTTAGAAGCA 57.091 40.909 0.00 0.00 0.00 3.91
3949 9989 2.172717 CCCGGTATCCCTGTCAGAATTT 59.827 50.000 0.00 0.00 0.00 1.82
3957 9997 2.040606 AGTGCCCGGTATCCCTGT 59.959 61.111 0.00 0.00 0.00 4.00
3958 9998 2.505982 CAGTGCCCGGTATCCCTG 59.494 66.667 0.00 0.00 0.00 4.45
3959 9999 3.480133 GCAGTGCCCGGTATCCCT 61.480 66.667 2.85 0.00 0.00 4.20
3962 10002 1.369091 CTGTTGCAGTGCCCGGTATC 61.369 60.000 13.72 0.00 0.00 2.24
3963 10003 1.377202 CTGTTGCAGTGCCCGGTAT 60.377 57.895 13.72 0.00 0.00 2.73
3964 10004 2.031919 CTGTTGCAGTGCCCGGTA 59.968 61.111 13.72 0.00 0.00 4.02
3965 10005 4.189580 ACTGTTGCAGTGCCCGGT 62.190 61.111 13.72 11.43 43.63 5.28
3972 10012 2.928801 TATGTCCACACTGTTGCAGT 57.071 45.000 0.00 0.00 46.51 4.40
3977 10017 4.776349 TCACAACTTATGTCCACACTGTT 58.224 39.130 0.00 0.00 41.46 3.16
3983 10023 6.206634 TGAAAGGATTCACAACTTATGTCCAC 59.793 38.462 0.00 0.00 41.46 4.02
4009 10052 2.268298 CTGCTGAAAGGATTGCATTGC 58.732 47.619 0.46 0.46 29.63 3.56
4011 10054 2.895404 ACACTGCTGAAAGGATTGCATT 59.105 40.909 0.00 0.00 38.52 3.56
4015 10058 2.227388 GTCCACACTGCTGAAAGGATTG 59.773 50.000 0.00 0.00 40.75 2.67
4018 10061 0.836606 TGTCCACACTGCTGAAAGGA 59.163 50.000 0.00 0.00 0.00 3.36
4019 10062 1.538512 CATGTCCACACTGCTGAAAGG 59.461 52.381 0.00 0.00 0.00 3.11
4020 10063 2.224606 ACATGTCCACACTGCTGAAAG 58.775 47.619 0.00 0.00 0.00 2.62
4023 10066 0.319813 CGACATGTCCACACTGCTGA 60.320 55.000 20.03 0.00 0.00 4.26
4024 10067 0.601046 ACGACATGTCCACACTGCTG 60.601 55.000 20.03 5.25 0.00 4.41
4025 10068 0.106708 AACGACATGTCCACACTGCT 59.893 50.000 20.03 0.00 0.00 4.24
4027 10070 1.939934 ACAAACGACATGTCCACACTG 59.060 47.619 20.03 12.16 0.00 3.66
4029 10072 1.002900 CCACAAACGACATGTCCACAC 60.003 52.381 20.03 0.00 0.00 3.82
4030 10073 1.134371 TCCACAAACGACATGTCCACA 60.134 47.619 20.03 0.00 0.00 4.17
4031 10074 1.588674 TCCACAAACGACATGTCCAC 58.411 50.000 20.03 0.00 0.00 4.02
4032 10075 2.224402 TGATCCACAAACGACATGTCCA 60.224 45.455 20.03 5.23 0.00 4.02
4033 10076 2.159627 GTGATCCACAAACGACATGTCC 59.840 50.000 20.03 2.59 34.08 4.02
4087 10146 3.133542 GGTACTAACCTTAACCGGCAGAT 59.866 47.826 0.00 0.00 43.08 2.90
4122 10264 8.985315 TGCAGTCATAAATTTAGGATCAGAAT 57.015 30.769 15.00 0.00 0.00 2.40
4133 10275 5.401550 CACCGTGAATGCAGTCATAAATTT 58.598 37.500 21.00 0.00 31.46 1.82
4152 10300 0.179113 AAAGTGGTTGCTTTGCACCG 60.179 50.000 0.00 0.00 38.71 4.94
4153 10301 1.289276 CAAAGTGGTTGCTTTGCACC 58.711 50.000 5.75 0.00 45.57 5.01
4187 10338 4.603131 TGGAGAAAGCAAGCAGGATAAAT 58.397 39.130 0.00 0.00 0.00 1.40
4191 10342 2.241685 AGATGGAGAAAGCAAGCAGGAT 59.758 45.455 0.00 0.00 0.00 3.24
4221 10455 9.734620 GAATGCAGTCATAAATTAAGCACATAA 57.265 29.630 9.72 0.00 32.92 1.90
4242 10480 2.397549 GGTTGCTTGAACTGTGAATGC 58.602 47.619 0.00 0.00 34.66 3.56
4253 10491 1.388547 AAAGAACTGCGGTTGCTTGA 58.611 45.000 17.49 0.00 43.34 3.02
4258 10496 3.368495 GGTACAAAAAGAACTGCGGTTG 58.632 45.455 17.49 3.11 35.58 3.77
4259 10497 2.359848 GGGTACAAAAAGAACTGCGGTT 59.640 45.455 11.62 11.62 38.52 4.44
4262 10500 2.227194 AGGGGTACAAAAAGAACTGCG 58.773 47.619 0.00 0.00 0.00 5.18
4263 10501 4.665833 AAAGGGGTACAAAAAGAACTGC 57.334 40.909 0.00 0.00 0.00 4.40
4318 10598 3.065233 TGATGAGGAAAATGCACGCATAC 59.935 43.478 4.68 0.65 35.31 2.39
4334 10614 4.556233 TGTACGGAACAGAAACTGATGAG 58.444 43.478 5.76 0.00 35.18 2.90
4337 10617 5.147330 TCATGTACGGAACAGAAACTGAT 57.853 39.130 5.76 0.00 42.70 2.90
4378 10663 2.498167 GCACCAAGTGAGTGATGTCTT 58.502 47.619 0.00 0.00 37.42 3.01
4399 10684 5.728471 TGACTGAAGTCTTCATCTTGATCC 58.272 41.667 15.60 1.13 44.99 3.36
4408 10698 3.259123 TGCAGCTATGACTGAAGTCTTCA 59.741 43.478 14.54 14.54 44.99 3.02
4417 10707 8.562052 TCAAACATATTATTGCAGCTATGACTG 58.438 33.333 5.77 0.00 40.80 3.51
4422 10712 7.522725 GCCTGTCAAACATATTATTGCAGCTAT 60.523 37.037 0.00 0.00 33.39 2.97
4432 10722 5.009631 AGCACAAGCCTGTCAAACATATTA 58.990 37.500 0.00 0.00 43.56 0.98
4438 10728 0.312102 GGAGCACAAGCCTGTCAAAC 59.688 55.000 0.00 0.00 43.56 2.93
4459 10771 1.336148 CCTGCTGCTTCATGCGAAAAA 60.336 47.619 0.00 0.00 46.63 1.94
4544 10856 9.705290 ATTCGTGGTAAGAAAAGCAAATATTTT 57.295 25.926 0.00 0.00 32.68 1.82
4545 10857 9.353999 GATTCGTGGTAAGAAAAGCAAATATTT 57.646 29.630 0.00 0.00 0.00 1.40
4546 10858 8.519526 TGATTCGTGGTAAGAAAAGCAAATATT 58.480 29.630 0.00 0.00 0.00 1.28
4547 10859 8.050778 TGATTCGTGGTAAGAAAAGCAAATAT 57.949 30.769 0.00 0.00 0.00 1.28
4548 10860 7.441890 TGATTCGTGGTAAGAAAAGCAAATA 57.558 32.000 0.00 0.00 0.00 1.40
4549 10861 6.325919 TGATTCGTGGTAAGAAAAGCAAAT 57.674 33.333 0.00 0.00 0.00 2.32
4550 10862 5.759506 TGATTCGTGGTAAGAAAAGCAAA 57.240 34.783 0.00 0.00 0.00 3.68
4551 10863 5.298276 ACTTGATTCGTGGTAAGAAAAGCAA 59.702 36.000 0.00 0.00 0.00 3.91
4552 10864 4.819630 ACTTGATTCGTGGTAAGAAAAGCA 59.180 37.500 0.00 0.00 0.00 3.91
4553 10865 5.147162 CACTTGATTCGTGGTAAGAAAAGC 58.853 41.667 0.00 0.00 0.00 3.51
4554 10866 5.049405 AGCACTTGATTCGTGGTAAGAAAAG 60.049 40.000 0.00 0.00 40.88 2.27
4555 10867 4.819630 AGCACTTGATTCGTGGTAAGAAAA 59.180 37.500 0.00 0.00 40.88 2.29
4556 10868 4.385825 AGCACTTGATTCGTGGTAAGAAA 58.614 39.130 0.00 0.00 40.88 2.52
4557 10869 4.002906 AGCACTTGATTCGTGGTAAGAA 57.997 40.909 0.00 0.00 40.88 2.52
4558 10870 3.678056 AGCACTTGATTCGTGGTAAGA 57.322 42.857 0.00 0.00 40.88 2.10
4559 10871 4.749245 AAAGCACTTGATTCGTGGTAAG 57.251 40.909 0.00 0.00 41.72 2.34
4560 10872 6.811253 ATTAAAGCACTTGATTCGTGGTAA 57.189 33.333 0.00 0.00 41.72 2.85
4561 10873 6.811253 AATTAAAGCACTTGATTCGTGGTA 57.189 33.333 0.00 0.00 41.72 3.25
4562 10874 5.705609 AATTAAAGCACTTGATTCGTGGT 57.294 34.783 0.00 0.00 44.14 4.16
4563 10875 5.572896 GGAAATTAAAGCACTTGATTCGTGG 59.427 40.000 0.00 0.00 33.10 4.94
4564 10876 6.381801 AGGAAATTAAAGCACTTGATTCGTG 58.618 36.000 0.00 0.00 35.53 4.35
4565 10877 6.575162 AGGAAATTAAAGCACTTGATTCGT 57.425 33.333 0.00 0.00 0.00 3.85
4566 10878 7.873739 AAAGGAAATTAAAGCACTTGATTCG 57.126 32.000 0.00 0.00 0.00 3.34
4570 10882 9.528018 CAAGTAAAAGGAAATTAAAGCACTTGA 57.472 29.630 0.00 0.00 40.83 3.02
4571 10883 9.528018 TCAAGTAAAAGGAAATTAAAGCACTTG 57.472 29.630 0.00 0.00 40.11 3.16
4575 10887 9.705290 GGATTCAAGTAAAAGGAAATTAAAGCA 57.295 29.630 0.00 0.00 0.00 3.91
4576 10888 9.929180 AGGATTCAAGTAAAAGGAAATTAAAGC 57.071 29.630 0.00 0.00 0.00 3.51
4595 10907 7.013942 CAGCATCCTATCAAATGAAAGGATTCA 59.986 37.037 0.00 0.00 44.65 2.57
4596 10908 7.368833 CAGCATCCTATCAAATGAAAGGATTC 58.631 38.462 0.00 0.00 44.65 2.52
4597 10909 6.239232 GCAGCATCCTATCAAATGAAAGGATT 60.239 38.462 0.00 0.00 44.65 3.01
4599 10911 4.581824 GCAGCATCCTATCAAATGAAAGGA 59.418 41.667 0.00 0.00 42.17 3.36
4600 10912 4.583489 AGCAGCATCCTATCAAATGAAAGG 59.417 41.667 0.00 0.00 0.00 3.11
4601 10913 5.769484 AGCAGCATCCTATCAAATGAAAG 57.231 39.130 0.00 0.00 0.00 2.62
4602 10914 6.071221 ACAAAGCAGCATCCTATCAAATGAAA 60.071 34.615 0.00 0.00 0.00 2.69
4603 10915 5.419788 ACAAAGCAGCATCCTATCAAATGAA 59.580 36.000 0.00 0.00 0.00 2.57
4604 10916 4.951715 ACAAAGCAGCATCCTATCAAATGA 59.048 37.500 0.00 0.00 0.00 2.57
4605 10917 5.258456 ACAAAGCAGCATCCTATCAAATG 57.742 39.130 0.00 0.00 0.00 2.32
4606 10918 7.408756 TTTACAAAGCAGCATCCTATCAAAT 57.591 32.000 0.00 0.00 0.00 2.32
4607 10919 6.127647 CCTTTACAAAGCAGCATCCTATCAAA 60.128 38.462 0.00 0.00 34.69 2.69
4608 10920 5.357878 CCTTTACAAAGCAGCATCCTATCAA 59.642 40.000 0.00 0.00 34.69 2.57
4609 10921 4.883585 CCTTTACAAAGCAGCATCCTATCA 59.116 41.667 0.00 0.00 34.69 2.15
4610 10922 4.261363 GCCTTTACAAAGCAGCATCCTATC 60.261 45.833 0.00 0.00 34.69 2.08
4611 10923 3.633986 GCCTTTACAAAGCAGCATCCTAT 59.366 43.478 0.00 0.00 34.69 2.57
4612 10924 3.016736 GCCTTTACAAAGCAGCATCCTA 58.983 45.455 0.00 0.00 34.69 2.94
4613 10925 1.821136 GCCTTTACAAAGCAGCATCCT 59.179 47.619 0.00 0.00 34.69 3.24
4614 10926 1.821136 AGCCTTTACAAAGCAGCATCC 59.179 47.619 0.00 0.00 34.69 3.51
4615 10927 2.489329 TGAGCCTTTACAAAGCAGCATC 59.511 45.455 0.00 2.75 34.69 3.91
4616 10928 2.517959 TGAGCCTTTACAAAGCAGCAT 58.482 42.857 0.00 0.00 34.69 3.79
4617 10929 1.979855 TGAGCCTTTACAAAGCAGCA 58.020 45.000 0.00 0.00 34.69 4.41
4618 10930 4.907879 ATATGAGCCTTTACAAAGCAGC 57.092 40.909 0.00 0.00 34.69 5.25
4619 10931 7.658982 TCTGATATATGAGCCTTTACAAAGCAG 59.341 37.037 0.00 0.00 34.69 4.24
4620 10932 7.508687 TCTGATATATGAGCCTTTACAAAGCA 58.491 34.615 0.00 0.00 34.69 3.91
4621 10933 7.969536 TCTGATATATGAGCCTTTACAAAGC 57.030 36.000 0.00 0.00 34.69 3.51
4638 10950 7.451255 GCCCTCTCTGCTACATATATCTGATAT 59.549 40.741 14.18 14.18 0.00 1.63
4639 10951 6.775142 GCCCTCTCTGCTACATATATCTGATA 59.225 42.308 0.00 0.00 0.00 2.15
4640 10952 5.598005 GCCCTCTCTGCTACATATATCTGAT 59.402 44.000 0.00 0.00 0.00 2.90
4641 10953 4.952957 GCCCTCTCTGCTACATATATCTGA 59.047 45.833 0.00 0.00 0.00 3.27
4642 10954 4.955450 AGCCCTCTCTGCTACATATATCTG 59.045 45.833 0.00 0.00 37.28 2.90
4643 10955 4.955450 CAGCCCTCTCTGCTACATATATCT 59.045 45.833 0.00 0.00 36.81 1.98
4644 10956 4.709397 ACAGCCCTCTCTGCTACATATATC 59.291 45.833 0.00 0.00 36.81 1.63
4645 10957 4.682563 ACAGCCCTCTCTGCTACATATAT 58.317 43.478 0.00 0.00 36.81 0.86
4646 10958 4.082845 GACAGCCCTCTCTGCTACATATA 58.917 47.826 0.00 0.00 36.81 0.86
4647 10959 2.896685 GACAGCCCTCTCTGCTACATAT 59.103 50.000 0.00 0.00 36.81 1.78
4648 10960 2.091610 AGACAGCCCTCTCTGCTACATA 60.092 50.000 0.00 0.00 36.81 2.29
4649 10961 1.118838 GACAGCCCTCTCTGCTACAT 58.881 55.000 0.00 0.00 36.81 2.29
4650 10962 0.040351 AGACAGCCCTCTCTGCTACA 59.960 55.000 0.00 0.00 36.81 2.74
4651 10963 1.136110 GAAGACAGCCCTCTCTGCTAC 59.864 57.143 0.00 0.00 36.81 3.58
4652 10964 1.006519 AGAAGACAGCCCTCTCTGCTA 59.993 52.381 0.00 0.00 36.81 3.49
4653 10965 0.252193 AGAAGACAGCCCTCTCTGCT 60.252 55.000 0.00 0.00 40.41 4.24
4654 10966 0.612744 AAGAAGACAGCCCTCTCTGC 59.387 55.000 0.00 0.00 37.59 4.26
4655 10967 1.622811 ACAAGAAGACAGCCCTCTCTG 59.377 52.381 0.00 0.00 39.86 3.35
4656 10968 1.899142 GACAAGAAGACAGCCCTCTCT 59.101 52.381 0.00 0.00 0.00 3.10
4657 10969 1.899142 AGACAAGAAGACAGCCCTCTC 59.101 52.381 0.00 0.00 0.00 3.20
4658 10970 2.022718 AGACAAGAAGACAGCCCTCT 57.977 50.000 0.00 0.00 0.00 3.69
4659 10971 2.421619 CAAGACAAGAAGACAGCCCTC 58.578 52.381 0.00 0.00 0.00 4.30
4660 10972 1.072965 CCAAGACAAGAAGACAGCCCT 59.927 52.381 0.00 0.00 0.00 5.19
4661 10973 1.202818 ACCAAGACAAGAAGACAGCCC 60.203 52.381 0.00 0.00 0.00 5.19
4662 10974 1.876156 CACCAAGACAAGAAGACAGCC 59.124 52.381 0.00 0.00 0.00 4.85
4663 10975 1.876156 CCACCAAGACAAGAAGACAGC 59.124 52.381 0.00 0.00 0.00 4.40
4664 10976 2.874701 CACCACCAAGACAAGAAGACAG 59.125 50.000 0.00 0.00 0.00 3.51
4665 10977 2.917933 CACCACCAAGACAAGAAGACA 58.082 47.619 0.00 0.00 0.00 3.41
4666 10978 1.604278 GCACCACCAAGACAAGAAGAC 59.396 52.381 0.00 0.00 0.00 3.01
4667 10979 1.211703 TGCACCACCAAGACAAGAAGA 59.788 47.619 0.00 0.00 0.00 2.87
4668 10980 1.679139 TGCACCACCAAGACAAGAAG 58.321 50.000 0.00 0.00 0.00 2.85
4669 10981 2.363306 ATGCACCACCAAGACAAGAA 57.637 45.000 0.00 0.00 0.00 2.52
4670 10982 2.363306 AATGCACCACCAAGACAAGA 57.637 45.000 0.00 0.00 0.00 3.02
4671 10983 4.789012 ATAAATGCACCACCAAGACAAG 57.211 40.909 0.00 0.00 0.00 3.16
4672 10984 5.295950 CAAATAAATGCACCACCAAGACAA 58.704 37.500 0.00 0.00 0.00 3.18
4673 10985 4.798924 GCAAATAAATGCACCACCAAGACA 60.799 41.667 0.00 0.00 45.70 3.41
4674 10986 3.679502 GCAAATAAATGCACCACCAAGAC 59.320 43.478 0.00 0.00 45.70 3.01
4675 10987 3.924144 GCAAATAAATGCACCACCAAGA 58.076 40.909 0.00 0.00 45.70 3.02
4685 10997 7.832503 ACCATTCTGTAAAGCAAATAAATGC 57.167 32.000 0.00 0.00 46.78 3.56
4688 11000 9.249053 TCCATACCATTCTGTAAAGCAAATAAA 57.751 29.630 0.00 0.00 0.00 1.40
4689 11001 8.815565 TCCATACCATTCTGTAAAGCAAATAA 57.184 30.769 0.00 0.00 0.00 1.40
4690 11002 8.849168 CATCCATACCATTCTGTAAAGCAAATA 58.151 33.333 0.00 0.00 0.00 1.40
4691 11003 7.342799 ACATCCATACCATTCTGTAAAGCAAAT 59.657 33.333 0.00 0.00 0.00 2.32
4692 11004 6.663093 ACATCCATACCATTCTGTAAAGCAAA 59.337 34.615 0.00 0.00 0.00 3.68
4693 11005 6.186957 ACATCCATACCATTCTGTAAAGCAA 58.813 36.000 0.00 0.00 0.00 3.91
4694 11006 5.754782 ACATCCATACCATTCTGTAAAGCA 58.245 37.500 0.00 0.00 0.00 3.91
4695 11007 7.255139 GGTTACATCCATACCATTCTGTAAAGC 60.255 40.741 0.00 0.00 32.65 3.51
4696 11008 7.993183 AGGTTACATCCATACCATTCTGTAAAG 59.007 37.037 0.00 0.00 32.65 1.85
4697 11009 7.867921 AGGTTACATCCATACCATTCTGTAAA 58.132 34.615 0.00 0.00 32.65 2.01
4698 11010 7.446106 AGGTTACATCCATACCATTCTGTAA 57.554 36.000 0.00 0.00 34.32 2.41
4699 11011 7.419750 GGAAGGTTACATCCATACCATTCTGTA 60.420 40.741 2.19 0.00 35.71 2.74
4700 11012 5.975988 AGGTTACATCCATACCATTCTGT 57.024 39.130 0.00 0.00 34.32 3.41
4701 11013 5.765182 GGAAGGTTACATCCATACCATTCTG 59.235 44.000 2.19 0.00 35.71 3.02
4702 11014 5.672194 AGGAAGGTTACATCCATACCATTCT 59.328 40.000 8.72 0.00 38.23 2.40
4703 11015 5.941788 AGGAAGGTTACATCCATACCATTC 58.058 41.667 8.72 0.00 38.23 2.67
4704 11016 5.994416 AGGAAGGTTACATCCATACCATT 57.006 39.130 8.72 0.00 38.23 3.16
4705 11017 6.151049 AGTAGGAAGGTTACATCCATACCAT 58.849 40.000 8.72 0.00 38.23 3.55
4706 11018 5.535029 AGTAGGAAGGTTACATCCATACCA 58.465 41.667 8.72 0.00 38.23 3.25
4707 11019 7.793948 ATAGTAGGAAGGTTACATCCATACC 57.206 40.000 8.72 0.00 38.23 2.73
4711 11023 9.220906 ACAATAATAGTAGGAAGGTTACATCCA 57.779 33.333 8.72 0.00 38.23 3.41
4712 11024 9.490379 CACAATAATAGTAGGAAGGTTACATCC 57.510 37.037 0.00 0.00 35.88 3.51
4718 11030 8.822805 TCACTTCACAATAATAGTAGGAAGGTT 58.177 33.333 0.00 0.00 35.72 3.50
4719 11031 8.375493 TCACTTCACAATAATAGTAGGAAGGT 57.625 34.615 0.00 0.00 35.72 3.50
4720 11032 9.667107 TTTCACTTCACAATAATAGTAGGAAGG 57.333 33.333 0.00 0.00 35.72 3.46
4734 11046 9.897744 GTATCTCAATTCAATTTCACTTCACAA 57.102 29.630 0.00 0.00 0.00 3.33
4735 11047 9.065798 TGTATCTCAATTCAATTTCACTTCACA 57.934 29.630 0.00 0.00 0.00 3.58
4736 11048 9.334693 GTGTATCTCAATTCAATTTCACTTCAC 57.665 33.333 0.00 0.00 0.00 3.18
4737 11049 9.288576 AGTGTATCTCAATTCAATTTCACTTCA 57.711 29.630 0.00 0.00 0.00 3.02
4738 11050 9.766277 GAGTGTATCTCAATTCAATTTCACTTC 57.234 33.333 0.00 0.00 42.34 3.01
4739 11051 9.512588 AGAGTGTATCTCAATTCAATTTCACTT 57.487 29.630 0.00 0.00 44.98 3.16
4742 11054 9.942850 TGTAGAGTGTATCTCAATTCAATTTCA 57.057 29.630 0.00 0.00 44.98 2.69
4745 11057 9.388506 CCTTGTAGAGTGTATCTCAATTCAATT 57.611 33.333 0.00 0.00 44.98 2.32
4746 11058 7.989741 CCCTTGTAGAGTGTATCTCAATTCAAT 59.010 37.037 0.00 0.00 44.98 2.57
4747 11059 7.180229 TCCCTTGTAGAGTGTATCTCAATTCAA 59.820 37.037 0.00 0.00 44.98 2.69
4748 11060 6.667848 TCCCTTGTAGAGTGTATCTCAATTCA 59.332 38.462 0.00 0.00 44.98 2.57
4749 11061 7.068839 TCTCCCTTGTAGAGTGTATCTCAATTC 59.931 40.741 0.00 0.00 44.98 2.17
4750 11062 6.897966 TCTCCCTTGTAGAGTGTATCTCAATT 59.102 38.462 0.00 0.00 44.98 2.32
4751 11063 6.436027 TCTCCCTTGTAGAGTGTATCTCAAT 58.564 40.000 0.00 0.00 44.98 2.57
4752 11064 5.827756 TCTCCCTTGTAGAGTGTATCTCAA 58.172 41.667 0.00 0.00 44.98 3.02
4753 11065 5.452341 TCTCCCTTGTAGAGTGTATCTCA 57.548 43.478 0.00 0.00 44.98 3.27
4754 11066 6.737346 GCATTCTCCCTTGTAGAGTGTATCTC 60.737 46.154 0.00 0.00 43.05 2.75
4755 11067 5.069781 GCATTCTCCCTTGTAGAGTGTATCT 59.930 44.000 0.00 0.00 42.47 1.98
4756 11068 5.069781 AGCATTCTCCCTTGTAGAGTGTATC 59.930 44.000 0.00 0.00 34.26 2.24
4757 11069 4.965532 AGCATTCTCCCTTGTAGAGTGTAT 59.034 41.667 0.00 0.00 34.26 2.29
4758 11070 4.353777 AGCATTCTCCCTTGTAGAGTGTA 58.646 43.478 0.00 0.00 34.26 2.90
4759 11071 3.177228 AGCATTCTCCCTTGTAGAGTGT 58.823 45.455 0.00 0.00 34.26 3.55
4760 11072 3.902881 AGCATTCTCCCTTGTAGAGTG 57.097 47.619 0.00 0.00 34.72 3.51
4761 11073 3.198853 GGAAGCATTCTCCCTTGTAGAGT 59.801 47.826 0.00 0.00 46.56 3.24
4762 11074 3.432890 GGGAAGCATTCTCCCTTGTAGAG 60.433 52.174 0.38 0.00 46.56 2.43
4763 11075 2.505819 GGGAAGCATTCTCCCTTGTAGA 59.494 50.000 0.38 0.00 46.56 2.59
4764 11076 2.924421 GGGAAGCATTCTCCCTTGTAG 58.076 52.381 0.38 0.00 46.56 2.74
4766 11078 3.987594 GGGAAGCATTCTCCCTTGT 57.012 52.632 0.38 0.00 46.56 3.16
4773 11085 7.243604 TCAAACAAATATTGGGAAGCATTCT 57.756 32.000 0.00 0.00 46.56 2.40
4774 11086 8.496707 AATCAAACAAATATTGGGAAGCATTC 57.503 30.769 0.00 0.00 46.67 2.67
4775 11087 8.323567 AGAATCAAACAAATATTGGGAAGCATT 58.676 29.630 0.00 0.00 34.12 3.56
4776 11088 7.854337 AGAATCAAACAAATATTGGGAAGCAT 58.146 30.769 0.00 0.00 34.12 3.79
4777 11089 7.243604 AGAATCAAACAAATATTGGGAAGCA 57.756 32.000 0.00 0.00 34.12 3.91
4778 11090 7.818930 TCAAGAATCAAACAAATATTGGGAAGC 59.181 33.333 0.00 0.00 34.12 3.86
4779 11091 9.709495 TTCAAGAATCAAACAAATATTGGGAAG 57.291 29.630 0.00 0.00 34.12 3.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.