Multiple sequence alignment - TraesCS5B01G568700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G568700 chr5B 100.000 9117 0 0 1 9117 711624457 711633573 0.000000e+00 16837.0
1 TraesCS5B01G568700 chr5B 88.246 2178 193 32 3530 5671 711699770 711701920 0.000000e+00 2545.0
2 TraesCS5B01G568700 chr5B 84.814 968 95 29 3537 4466 711883903 711884856 0.000000e+00 926.0
3 TraesCS5B01G568700 chr5B 78.801 717 92 32 2229 2927 711698661 711699335 2.350000e-115 427.0
4 TraesCS5B01G568700 chr5B 97.333 225 5 1 2996 3219 711699349 711699573 1.860000e-101 381.0
5 TraesCS5B01G568700 chr5B 85.806 310 32 9 8594 8894 699600408 699600102 1.480000e-82 318.0
6 TraesCS5B01G568700 chr5B 81.707 410 45 14 8610 8994 703720453 703720049 1.910000e-81 315.0
7 TraesCS5B01G568700 chr5B 90.404 198 19 0 1335 1532 711698011 711698208 2.520000e-65 261.0
8 TraesCS5B01G568700 chr5B 82.353 289 34 10 8718 8994 700009741 700009458 1.530000e-57 235.0
9 TraesCS5B01G568700 chr5B 84.821 224 21 7 7 227 711617498 711617711 7.170000e-51 213.0
10 TraesCS5B01G568700 chr5B 83.708 178 16 5 8276 8445 711707913 711708085 1.230000e-33 156.0
11 TraesCS5B01G568700 chr5B 92.208 77 6 0 987 1063 711697618 711697694 9.680000e-20 110.0
12 TraesCS5B01G568700 chr5B 84.034 119 11 5 2075 2190 711698548 711698661 3.480000e-19 108.0
13 TraesCS5B01G568700 chr5B 92.188 64 5 0 6212 6275 711548324 711548261 3.510000e-14 91.6
14 TraesCS5B01G568700 chr5D 91.453 4762 212 78 1174 5850 561701009 561705660 0.000000e+00 6359.0
15 TraesCS5B01G568700 chr5D 90.871 2410 128 30 6086 8445 561705663 561708030 0.000000e+00 3147.0
16 TraesCS5B01G568700 chr5D 88.097 1865 167 24 3835 5671 561795963 561797800 0.000000e+00 2163.0
17 TraesCS5B01G568700 chr5D 80.614 717 93 27 2229 2927 561794574 561795262 6.310000e-141 512.0
18 TraesCS5B01G568700 chr5D 94.853 272 14 0 3530 3801 561795691 561795962 8.460000e-115 425.0
19 TraesCS5B01G568700 chr5D 95.089 224 11 0 2996 3219 561795279 561795502 4.050000e-93 353.0
20 TraesCS5B01G568700 chr5D 81.352 429 46 14 8595 8994 551390954 551390531 1.480000e-82 318.0
21 TraesCS5B01G568700 chr5D 81.163 430 46 14 8595 8994 551354610 551354186 6.870000e-81 313.0
22 TraesCS5B01G568700 chr5D 81.627 381 55 11 8740 9117 551314256 551313888 1.490000e-77 302.0
23 TraesCS5B01G568700 chr5D 84.722 288 19 12 825 1107 561700610 561700877 1.950000e-66 265.0
24 TraesCS5B01G568700 chr5D 90.674 193 17 1 1344 1536 561793911 561794102 1.170000e-63 255.0
25 TraesCS5B01G568700 chr5D 89.691 194 9 7 8930 9117 558690302 558690114 4.260000e-58 237.0
26 TraesCS5B01G568700 chr5D 77.635 389 58 15 8749 9117 537220107 537219728 9.280000e-50 209.0
27 TraesCS5B01G568700 chr5D 85.030 167 20 4 898 1064 561792832 561792993 2.040000e-36 165.0
28 TraesCS5B01G568700 chr5D 94.624 93 3 2 6211 6302 561633121 561633030 9.540000e-30 143.0
29 TraesCS5B01G568700 chr5D 82.270 141 15 6 155 288 561699908 561700045 7.480000e-21 113.0
30 TraesCS5B01G568700 chr5D 84.034 119 16 2 2074 2190 561794457 561794574 2.690000e-20 111.0
31 TraesCS5B01G568700 chr5D 92.208 77 6 0 6211 6287 561664058 561663982 9.680000e-20 110.0
32 TraesCS5B01G568700 chr7B 90.888 2974 162 59 810 3743 1262420 1259516 0.000000e+00 3890.0
33 TraesCS5B01G568700 chr7B 97.421 2016 39 2 3684 5696 1259518 1257513 0.000000e+00 3422.0
34 TraesCS5B01G568700 chr7B 95.812 1743 59 6 6171 7902 1256699 1254960 0.000000e+00 2802.0
35 TraesCS5B01G568700 chr7B 87.846 1876 159 27 3865 5707 1205738 1203899 0.000000e+00 2137.0
36 TraesCS5B01G568700 chr7B 90.197 1469 119 8 4264 5707 1027835 1026367 0.000000e+00 1892.0
37 TraesCS5B01G568700 chr7B 81.601 1087 115 53 2244 3307 1207220 1206196 0.000000e+00 821.0
38 TraesCS5B01G568700 chr7B 91.803 488 17 8 8016 8498 1254912 1254443 0.000000e+00 658.0
39 TraesCS5B01G568700 chr7B 94.710 397 17 4 8601 8995 1254333 1253939 1.680000e-171 614.0
40 TraesCS5B01G568700 chr7B 91.411 326 19 7 3531 3850 1206113 1205791 1.090000e-118 438.0
41 TraesCS5B01G568700 chr7B 90.175 285 23 3 5891 6173 1257140 1256859 5.200000e-97 366.0
42 TraesCS5B01G568700 chr7B 91.626 203 17 0 1344 1546 1207936 1207734 1.940000e-71 281.0
43 TraesCS5B01G568700 chr7B 80.870 345 34 17 13 325 1264612 1264268 9.150000e-60 243.0
44 TraesCS5B01G568700 chr7B 82.166 157 18 9 908 1064 1208407 1208261 9.610000e-25 126.0
45 TraesCS5B01G568700 chr7B 91.398 93 6 2 6211 6302 1380806 1380897 9.610000e-25 126.0
46 TraesCS5B01G568700 chr7B 92.105 76 6 0 6211 6286 1293271 1293346 3.480000e-19 108.0
47 TraesCS5B01G568700 chr7B 100.000 36 0 0 8993 9028 1253917 1253882 5.910000e-07 67.6
48 TraesCS5B01G568700 chr7B 100.000 35 0 0 8550 8584 1254364 1254330 2.120000e-06 65.8
49 TraesCS5B01G568700 chr7B 96.970 33 1 0 637 669 1262597 1262565 1.000000e-03 56.5
50 TraesCS5B01G568700 chr2B 89.034 1450 100 28 1427 2863 237060124 237058721 0.000000e+00 1742.0
51 TraesCS5B01G568700 chr2B 86.232 552 43 16 1790 2332 318609254 318609781 1.330000e-157 568.0
52 TraesCS5B01G568700 chr1B 94.793 845 32 9 3389 4225 115827495 115826655 0.000000e+00 1306.0
53 TraesCS5B01G568700 chr1B 90.615 895 42 11 5360 6216 115755813 115754923 0.000000e+00 1149.0
54 TraesCS5B01G568700 chr1B 94.753 667 32 1 4701 5364 115774353 115773687 0.000000e+00 1035.0
55 TraesCS5B01G568700 chr1B 90.772 531 30 6 2298 2822 115828585 115828068 0.000000e+00 691.0
56 TraesCS5B01G568700 chr1B 97.722 395 9 0 4260 4654 115826656 115826262 0.000000e+00 680.0
57 TraesCS5B01G568700 chr1B 95.285 403 14 5 8601 9001 115752386 115751987 1.290000e-177 634.0
58 TraesCS5B01G568700 chr1B 87.941 539 31 13 2805 3333 115828007 115827493 1.010000e-168 604.0
59 TraesCS5B01G568700 chr1B 85.563 284 16 10 8217 8498 115752840 115752580 3.240000e-69 274.0
60 TraesCS5B01G568700 chr1B 93.893 131 2 2 8993 9117 115751914 115751784 9.340000e-45 193.0
61 TraesCS5B01G568700 chr1B 87.879 165 6 8 380 543 651163919 651163768 2.020000e-41 182.0
62 TraesCS5B01G568700 chr1B 94.444 72 4 0 4646 4717 115774439 115774368 2.690000e-20 111.0
63 TraesCS5B01G568700 chr7A 93.750 224 14 0 2996 3219 469605442 469605219 4.080000e-88 337.0
64 TraesCS5B01G568700 chr7A 88.660 194 13 6 8930 9117 583460572 583460382 2.560000e-55 228.0
65 TraesCS5B01G568700 chr7A 85.279 197 21 4 2277 2466 667012986 667012791 7.220000e-46 196.0
66 TraesCS5B01G568700 chr7A 85.263 95 11 2 2094 2186 469605741 469605648 2.710000e-15 95.3
67 TraesCS5B01G568700 chr6A 93.750 224 14 0 2996 3219 558138930 558139153 4.080000e-88 337.0
68 TraesCS5B01G568700 chr4A 81.713 432 50 14 8587 8994 616722502 616722928 5.280000e-87 333.0
69 TraesCS5B01G568700 chr3A 93.304 224 15 0 2996 3219 499505250 499505027 1.900000e-86 331.0
70 TraesCS5B01G568700 chr3A 85.946 185 18 4 2277 2454 494434834 494435017 3.360000e-44 191.0
71 TraesCS5B01G568700 chr3A 95.312 64 1 1 9056 9117 177282317 177282254 5.820000e-17 100.0
72 TraesCS5B01G568700 chr3A 95.312 64 1 1 9056 9117 610138246 610138183 5.820000e-17 100.0
73 TraesCS5B01G568700 chr6B 96.450 169 6 0 6281 6449 653303822 653303654 6.970000e-71 279.0
74 TraesCS5B01G568700 chr6B 85.279 197 21 4 2277 2466 478658664 478658469 7.220000e-46 196.0
75 TraesCS5B01G568700 chr6B 84.211 95 12 2 2094 2186 6058297 6058390 1.260000e-13 89.8
76 TraesCS5B01G568700 chr7D 91.237 194 8 6 8930 9117 474910552 474910742 1.170000e-63 255.0
77 TraesCS5B01G568700 chr4B 78.454 427 61 19 1338 1759 327193272 327192872 5.470000e-62 250.0
78 TraesCS5B01G568700 chr4B 76.247 421 59 20 1330 1740 464131342 464131731 1.560000e-42 185.0
79 TraesCS5B01G568700 chr3D 90.256 195 9 7 8930 9117 403540055 403539864 7.070000e-61 246.0
80 TraesCS5B01G568700 chrUn 84.279 229 31 2 8626 8849 301306641 301306413 1.540000e-52 219.0
81 TraesCS5B01G568700 chr5A 86.486 185 17 6 2277 2454 102946167 102946350 7.220000e-46 196.0
82 TraesCS5B01G568700 chr3B 76.826 397 58 21 1348 1740 771761607 771761973 9.340000e-45 193.0
83 TraesCS5B01G568700 chr2D 90.476 63 6 0 1344 1406 642817667 642817605 5.870000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G568700 chr5B 711624457 711633573 9116 False 16837.000000 16837 100.000000 1 9117 1 chr5B.!!$F2 9116
1 TraesCS5B01G568700 chr5B 711883903 711884856 953 False 926.000000 926 84.814000 3537 4466 1 chr5B.!!$F4 929
2 TraesCS5B01G568700 chr5B 711697618 711701920 4302 False 638.666667 2545 88.504333 987 5671 6 chr5B.!!$F5 4684
3 TraesCS5B01G568700 chr5D 561699908 561708030 8122 False 2471.000000 6359 87.329000 155 8445 4 chr5D.!!$F1 8290
4 TraesCS5B01G568700 chr5D 561792832 561797800 4968 False 569.142857 2163 88.341571 898 5671 7 chr5D.!!$F2 4773
5 TraesCS5B01G568700 chr7B 1026367 1027835 1468 True 1892.000000 1892 90.197000 4264 5707 1 chr7B.!!$R1 1443
6 TraesCS5B01G568700 chr7B 1253882 1264612 10730 True 1218.490000 3890 93.864900 13 9028 10 chr7B.!!$R3 9015
7 TraesCS5B01G568700 chr7B 1203899 1208407 4508 True 760.600000 2137 86.930000 908 5707 5 chr7B.!!$R2 4799
8 TraesCS5B01G568700 chr2B 237058721 237060124 1403 True 1742.000000 1742 89.034000 1427 2863 1 chr2B.!!$R1 1436
9 TraesCS5B01G568700 chr2B 318609254 318609781 527 False 568.000000 568 86.232000 1790 2332 1 chr2B.!!$F1 542
10 TraesCS5B01G568700 chr1B 115826262 115828585 2323 True 820.250000 1306 92.807000 2298 4654 4 chr1B.!!$R4 2356
11 TraesCS5B01G568700 chr1B 115773687 115774439 752 True 573.000000 1035 94.598500 4646 5364 2 chr1B.!!$R3 718
12 TraesCS5B01G568700 chr1B 115751784 115755813 4029 True 562.500000 1149 91.339000 5360 9117 4 chr1B.!!$R2 3757
13 TraesCS5B01G568700 chr7A 469605219 469605741 522 True 216.150000 337 89.506500 2094 3219 2 chr7A.!!$R3 1125

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
727 2252 0.036577 GGAGCAGAAGCAGAGCAGAA 60.037 55.000 0.00 0.00 45.49 3.02 F
1474 3764 0.175760 GCTACACCATCCTGCTCGAA 59.824 55.000 0.00 0.00 0.00 3.71 F
2664 5060 0.035152 GACACACATCCAGCATCCCA 60.035 55.000 0.00 0.00 0.00 4.37 F
3781 6381 1.074566 TGGTATGTTGGTGCCATGACA 59.925 47.619 0.00 0.00 0.00 3.58 F
4275 6970 0.986019 CACCATACTACCCTGGGGCA 60.986 60.000 18.88 3.17 39.32 5.36 F
5186 7931 1.271379 TGTACACGGTGTGGATGAGTC 59.729 52.381 23.36 4.79 37.94 3.36 F
5866 8658 0.253020 TTAACCCCCTCTCCCTCCAC 60.253 60.000 0.00 0.00 0.00 4.02 F
7311 10475 0.029834 GCAATGCTATTCCCACGCTG 59.970 55.000 0.00 0.00 0.00 5.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2664 5060 0.317160 TCCGTCGTCATTCTGCAGTT 59.683 50.000 14.67 0.0 0.00 3.16 R
2962 5453 4.317139 CGATTAACACCTTACGAAGATGCG 60.317 45.833 0.00 0.0 37.29 4.73 R
4153 6812 1.841302 GCTCCTGGGTGGTGATGTGA 61.841 60.000 0.00 0.0 37.07 3.58 R
5466 8217 1.332997 GCTGGCATCTTTCCTTCATCG 59.667 52.381 0.00 0.0 0.00 3.84 R
5866 8658 0.679002 CTTGGTCTGTGCATGGAGGG 60.679 60.000 0.00 0.0 0.00 4.30 R
7147 10300 2.280628 CCTCGTAGGAATTCAACTGGC 58.719 52.381 7.93 0.0 37.67 4.85 R
7709 10873 1.528586 GCATCGGAATCCATCGTTGAG 59.471 52.381 0.00 0.0 0.00 3.02 R
8532 13191 0.192566 TACTCCCTCCGCCCCATAAT 59.807 55.000 0.00 0.0 0.00 1.28 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 4.907879 GCTGCCTGCAAAGAATATAGTT 57.092 40.909 0.00 0.00 42.31 2.24
45 49 8.986847 CAAAGAATATAGTTGAGCATCTACCAG 58.013 37.037 0.00 0.00 41.89 4.00
46 50 7.847711 AGAATATAGTTGAGCATCTACCAGT 57.152 36.000 0.00 0.00 41.89 4.00
68 77 7.417911 CCAGTACCTATCTAGCTGTCAATCAAA 60.418 40.741 0.00 0.00 0.00 2.69
80 89 4.753233 TGTCAATCAAAACCAAACCACTG 58.247 39.130 0.00 0.00 0.00 3.66
81 90 4.119136 GTCAATCAAAACCAAACCACTGG 58.881 43.478 0.00 0.00 42.68 4.00
94 103 4.600692 AACCACTGGACCAAATTAAAGC 57.399 40.909 0.71 0.00 0.00 3.51
115 124 2.614481 CCAGCCATCAAGCAAAGCAAAT 60.614 45.455 0.00 0.00 34.23 2.32
119 133 3.124636 GCCATCAAGCAAAGCAAATGAAG 59.875 43.478 0.00 0.00 0.00 3.02
152 166 4.172020 GGCTCTCCCTCCCTTAATCTTAT 58.828 47.826 0.00 0.00 0.00 1.73
153 167 5.342866 GGCTCTCCCTCCCTTAATCTTATA 58.657 45.833 0.00 0.00 0.00 0.98
183 201 5.003804 CACCAACTTAATCAGCTAACCAGT 58.996 41.667 0.00 0.00 0.00 4.00
185 203 5.221843 ACCAACTTAATCAGCTAACCAGTCA 60.222 40.000 0.00 0.00 0.00 3.41
207 226 7.673926 AGTCAAAATTACCAACATAACCTCCAT 59.326 33.333 0.00 0.00 0.00 3.41
226 245 3.587498 CATCCTCCCTGGTAATCTGGTA 58.413 50.000 0.00 0.00 37.07 3.25
227 246 3.330126 TCCTCCCTGGTAATCTGGTAG 57.670 52.381 0.00 0.00 37.07 3.18
228 247 2.590611 TCCTCCCTGGTAATCTGGTAGT 59.409 50.000 0.00 0.00 37.07 2.73
229 248 3.795545 TCCTCCCTGGTAATCTGGTAGTA 59.204 47.826 0.00 0.00 37.07 1.82
230 249 4.140994 TCCTCCCTGGTAATCTGGTAGTAG 60.141 50.000 0.00 0.00 37.07 2.57
231 250 4.387664 CCTCCCTGGTAATCTGGTAGTAGT 60.388 50.000 0.00 0.00 33.14 2.73
321 372 2.234143 TCTGTCACTCTGACTGAGGTG 58.766 52.381 13.28 9.12 45.94 4.00
328 387 4.832823 TCACTCTGACTGAGGTGATTTGTA 59.167 41.667 13.28 0.00 46.72 2.41
337 396 5.239525 ACTGAGGTGATTTGTAGTTTTGCTC 59.760 40.000 0.00 0.00 0.00 4.26
338 397 4.518970 TGAGGTGATTTGTAGTTTTGCTCC 59.481 41.667 0.00 0.00 0.00 4.70
339 398 3.826729 AGGTGATTTGTAGTTTTGCTCCC 59.173 43.478 0.00 0.00 0.00 4.30
342 401 5.279456 GGTGATTTGTAGTTTTGCTCCCATT 60.279 40.000 0.00 0.00 0.00 3.16
344 403 4.864704 TTTGTAGTTTTGCTCCCATTCC 57.135 40.909 0.00 0.00 0.00 3.01
345 404 3.517296 TGTAGTTTTGCTCCCATTCCA 57.483 42.857 0.00 0.00 0.00 3.53
351 410 1.864669 TTGCTCCCATTCCATTTCCC 58.135 50.000 0.00 0.00 0.00 3.97
386 459 1.133262 AGGGGAATCCAATGCCATCTG 60.133 52.381 0.09 0.00 38.24 2.90
387 460 1.133388 GGGGAATCCAATGCCATCTGA 60.133 52.381 0.09 0.00 35.00 3.27
388 461 2.492196 GGGGAATCCAATGCCATCTGAT 60.492 50.000 0.09 0.00 35.00 2.90
389 462 2.824341 GGGAATCCAATGCCATCTGATC 59.176 50.000 0.09 0.00 0.00 2.92
390 463 2.486982 GGAATCCAATGCCATCTGATCG 59.513 50.000 0.00 0.00 0.00 3.69
391 464 3.405831 GAATCCAATGCCATCTGATCGA 58.594 45.455 0.00 0.00 0.00 3.59
392 465 3.715638 ATCCAATGCCATCTGATCGAT 57.284 42.857 0.00 0.00 0.00 3.59
393 466 3.049708 TCCAATGCCATCTGATCGATC 57.950 47.619 18.72 18.72 0.00 3.69
394 467 2.636403 TCCAATGCCATCTGATCGATCT 59.364 45.455 25.02 3.30 0.00 2.75
408 481 2.695359 TCGATCTTAGGTTGTTGGCAC 58.305 47.619 0.00 0.00 0.00 5.01
409 482 2.301870 TCGATCTTAGGTTGTTGGCACT 59.698 45.455 0.00 0.00 0.00 4.40
410 483 3.074412 CGATCTTAGGTTGTTGGCACTT 58.926 45.455 0.00 0.00 0.00 3.16
411 484 3.120199 CGATCTTAGGTTGTTGGCACTTG 60.120 47.826 0.00 0.00 0.00 3.16
412 485 3.569194 TCTTAGGTTGTTGGCACTTGA 57.431 42.857 0.00 0.00 0.00 3.02
413 486 4.098914 TCTTAGGTTGTTGGCACTTGAT 57.901 40.909 0.00 0.00 0.00 2.57
414 487 4.072131 TCTTAGGTTGTTGGCACTTGATC 58.928 43.478 0.00 0.00 0.00 2.92
415 488 2.664402 AGGTTGTTGGCACTTGATCT 57.336 45.000 0.00 0.00 0.00 2.75
417 490 4.098914 AGGTTGTTGGCACTTGATCTAA 57.901 40.909 0.00 0.00 0.00 2.10
420 493 4.278419 GGTTGTTGGCACTTGATCTAAACT 59.722 41.667 0.00 0.00 0.00 2.66
422 495 6.371389 GTTGTTGGCACTTGATCTAAACTAC 58.629 40.000 0.00 0.00 0.00 2.73
423 496 5.001232 TGTTGGCACTTGATCTAAACTACC 58.999 41.667 0.00 0.00 0.00 3.18
424 497 5.221843 TGTTGGCACTTGATCTAAACTACCT 60.222 40.000 0.00 0.00 0.00 3.08
425 498 6.014070 TGTTGGCACTTGATCTAAACTACCTA 60.014 38.462 0.00 0.00 0.00 3.08
426 499 6.614694 TGGCACTTGATCTAAACTACCTAA 57.385 37.500 0.00 0.00 0.00 2.69
469 551 5.089970 TCTCACAATAATGGAGTGGAGTG 57.910 43.478 0.00 0.00 34.17 3.51
470 552 4.080919 TCTCACAATAATGGAGTGGAGTGG 60.081 45.833 0.00 0.00 34.17 4.00
471 553 3.843619 TCACAATAATGGAGTGGAGTGGA 59.156 43.478 0.00 0.00 34.17 4.02
472 554 4.080919 TCACAATAATGGAGTGGAGTGGAG 60.081 45.833 0.00 0.00 34.17 3.86
473 555 3.846588 ACAATAATGGAGTGGAGTGGAGT 59.153 43.478 0.00 0.00 0.00 3.85
474 556 4.194640 CAATAATGGAGTGGAGTGGAGTG 58.805 47.826 0.00 0.00 0.00 3.51
475 557 0.987294 AATGGAGTGGAGTGGAGTGG 59.013 55.000 0.00 0.00 0.00 4.00
476 558 0.117140 ATGGAGTGGAGTGGAGTGGA 59.883 55.000 0.00 0.00 0.00 4.02
477 559 0.542938 TGGAGTGGAGTGGAGTGGAG 60.543 60.000 0.00 0.00 0.00 3.86
478 560 0.543174 GGAGTGGAGTGGAGTGGAGT 60.543 60.000 0.00 0.00 0.00 3.85
479 561 0.605589 GAGTGGAGTGGAGTGGAGTG 59.394 60.000 0.00 0.00 0.00 3.51
480 562 0.833834 AGTGGAGTGGAGTGGAGTGG 60.834 60.000 0.00 0.00 0.00 4.00
485 567 2.096248 GAGTGGAGTGGAGTGGAGTAG 58.904 57.143 0.00 0.00 0.00 2.57
489 571 1.205893 GGAGTGGAGTGGAGTAGCTTG 59.794 57.143 0.00 0.00 0.00 4.01
506 588 8.209917 AGTAGCTTGAAATCCTAATAAAACCG 57.790 34.615 0.00 0.00 0.00 4.44
531 614 5.402270 CCGAAAATCACAACTGGATTTGTTC 59.598 40.000 0.00 0.00 42.48 3.18
539 622 1.503347 ACTGGATTTGTTCCCACCCTT 59.497 47.619 0.00 0.00 44.77 3.95
541 624 3.141272 ACTGGATTTGTTCCCACCCTTTA 59.859 43.478 0.00 0.00 44.77 1.85
542 625 4.156477 CTGGATTTGTTCCCACCCTTTAA 58.844 43.478 0.00 0.00 44.77 1.52
543 626 4.557705 TGGATTTGTTCCCACCCTTTAAA 58.442 39.130 0.00 0.00 44.77 1.52
545 628 4.262721 GGATTTGTTCCCACCCTTTAAACC 60.263 45.833 0.00 0.00 38.75 3.27
546 629 3.399952 TTGTTCCCACCCTTTAAACCA 57.600 42.857 0.00 0.00 0.00 3.67
547 630 2.668625 TGTTCCCACCCTTTAAACCAC 58.331 47.619 0.00 0.00 0.00 4.16
548 631 2.245287 TGTTCCCACCCTTTAAACCACT 59.755 45.455 0.00 0.00 0.00 4.00
549 632 2.626266 GTTCCCACCCTTTAAACCACTG 59.374 50.000 0.00 0.00 0.00 3.66
550 633 2.136863 TCCCACCCTTTAAACCACTGA 58.863 47.619 0.00 0.00 0.00 3.41
552 635 3.141272 TCCCACCCTTTAAACCACTGATT 59.859 43.478 0.00 0.00 0.00 2.57
553 636 4.354387 TCCCACCCTTTAAACCACTGATTA 59.646 41.667 0.00 0.00 0.00 1.75
555 638 5.540719 CCCACCCTTTAAACCACTGATTAAA 59.459 40.000 0.00 0.00 31.97 1.52
562 645 3.473113 AACCACTGATTAAAGGGCCAT 57.527 42.857 6.18 0.00 0.00 4.40
563 646 3.473113 ACCACTGATTAAAGGGCCATT 57.527 42.857 6.18 0.00 0.00 3.16
564 647 4.601406 ACCACTGATTAAAGGGCCATTA 57.399 40.909 1.49 0.29 0.00 1.90
565 648 4.536765 ACCACTGATTAAAGGGCCATTAG 58.463 43.478 1.49 0.00 0.00 1.73
566 649 4.017499 ACCACTGATTAAAGGGCCATTAGT 60.017 41.667 1.49 0.00 0.00 2.24
567 650 5.192923 ACCACTGATTAAAGGGCCATTAGTA 59.807 40.000 1.49 0.00 0.00 1.82
568 651 5.531287 CCACTGATTAAAGGGCCATTAGTAC 59.469 44.000 1.49 0.00 0.00 2.73
569 652 6.119536 CACTGATTAAAGGGCCATTAGTACA 58.880 40.000 1.49 1.50 0.00 2.90
574 657 4.668138 AAAGGGCCATTAGTACAAGGAA 57.332 40.909 1.49 0.00 0.00 3.36
575 658 3.933861 AGGGCCATTAGTACAAGGAAG 57.066 47.619 6.18 0.00 0.00 3.46
576 659 3.190439 AGGGCCATTAGTACAAGGAAGT 58.810 45.455 6.18 0.00 0.00 3.01
577 660 3.591977 AGGGCCATTAGTACAAGGAAGTT 59.408 43.478 6.18 0.00 0.00 2.66
580 663 4.395231 GGCCATTAGTACAAGGAAGTTCAC 59.605 45.833 5.01 0.00 0.00 3.18
581 664 4.395231 GCCATTAGTACAAGGAAGTTCACC 59.605 45.833 5.01 0.00 0.00 4.02
585 668 3.314693 AGTACAAGGAAGTTCACCCTCA 58.685 45.455 5.01 0.00 31.17 3.86
586 669 3.714798 AGTACAAGGAAGTTCACCCTCAA 59.285 43.478 5.01 0.00 31.17 3.02
587 670 2.932261 ACAAGGAAGTTCACCCTCAAC 58.068 47.619 5.01 0.00 31.17 3.18
588 671 2.241176 ACAAGGAAGTTCACCCTCAACA 59.759 45.455 5.01 0.00 31.17 3.33
589 672 3.287222 CAAGGAAGTTCACCCTCAACAA 58.713 45.455 5.01 0.00 31.17 2.83
590 673 3.662759 AGGAAGTTCACCCTCAACAAA 57.337 42.857 5.01 0.00 0.00 2.83
599 682 4.561105 TCACCCTCAACAAACAAACAAAC 58.439 39.130 0.00 0.00 0.00 2.93
608 691 7.526608 TCAACAAACAAACAAACAAACAAACA 58.473 26.923 0.00 0.00 0.00 2.83
612 695 6.370433 AACAAACAAACAAACAAACAGCTT 57.630 29.167 0.00 0.00 0.00 3.74
628 711 2.175878 GCTTCAGCTTGGAGTCTTGA 57.824 50.000 0.00 0.00 38.21 3.02
629 712 2.498167 GCTTCAGCTTGGAGTCTTGAA 58.502 47.619 0.00 0.00 38.21 2.69
630 713 2.483491 GCTTCAGCTTGGAGTCTTGAAG 59.517 50.000 7.88 7.88 38.21 3.02
631 714 3.737850 CTTCAGCTTGGAGTCTTGAAGT 58.262 45.455 4.77 0.00 0.00 3.01
633 716 2.968574 TCAGCTTGGAGTCTTGAAGTCT 59.031 45.455 0.00 0.00 0.00 3.24
634 717 3.389329 TCAGCTTGGAGTCTTGAAGTCTT 59.611 43.478 0.00 0.00 0.00 3.01
665 2141 3.009916 ACTGCACATCCTCCATTTCTTCT 59.990 43.478 0.00 0.00 0.00 2.85
703 2228 5.708736 AGTCCTCTCTCTCACTAATCAGA 57.291 43.478 0.00 0.00 0.00 3.27
705 2230 6.672593 AGTCCTCTCTCTCACTAATCAGAAT 58.327 40.000 0.00 0.00 0.00 2.40
715 2240 4.958581 TCACTAATCAGAATCAGGAGCAGA 59.041 41.667 0.00 0.00 0.00 4.26
717 2242 5.754406 CACTAATCAGAATCAGGAGCAGAAG 59.246 44.000 0.00 0.00 0.00 2.85
718 2243 2.687700 TCAGAATCAGGAGCAGAAGC 57.312 50.000 0.00 0.00 42.56 3.86
719 2244 1.904537 TCAGAATCAGGAGCAGAAGCA 59.095 47.619 0.00 0.00 45.49 3.91
720 2245 2.093606 TCAGAATCAGGAGCAGAAGCAG 60.094 50.000 0.00 0.00 45.49 4.24
721 2246 2.093606 CAGAATCAGGAGCAGAAGCAGA 60.094 50.000 0.00 0.00 45.49 4.26
722 2247 2.168936 AGAATCAGGAGCAGAAGCAGAG 59.831 50.000 0.00 0.00 45.49 3.35
723 2248 0.178533 ATCAGGAGCAGAAGCAGAGC 59.821 55.000 0.00 0.00 45.49 4.09
724 2249 1.190178 TCAGGAGCAGAAGCAGAGCA 61.190 55.000 0.00 0.00 45.49 4.26
725 2250 0.741574 CAGGAGCAGAAGCAGAGCAG 60.742 60.000 0.00 0.00 45.49 4.24
726 2251 0.903924 AGGAGCAGAAGCAGAGCAGA 60.904 55.000 0.00 0.00 45.49 4.26
727 2252 0.036577 GGAGCAGAAGCAGAGCAGAA 60.037 55.000 0.00 0.00 45.49 3.02
730 2258 0.954449 GCAGAAGCAGAGCAGAAGCA 60.954 55.000 0.00 0.00 41.72 3.91
743 2271 1.206849 CAGAAGCACTCTCTTCCTCCC 59.793 57.143 0.41 0.00 42.52 4.30
745 2273 0.912006 AAGCACTCTCTTCCTCCCCC 60.912 60.000 0.00 0.00 0.00 5.40
783 2311 9.656323 ATTTATTTATTTTACCCTTCCCTCCTC 57.344 33.333 0.00 0.00 0.00 3.71
784 2312 6.927691 ATTTATTTTACCCTTCCCTCCTCT 57.072 37.500 0.00 0.00 0.00 3.69
785 2313 5.710409 TTATTTTACCCTTCCCTCCTCTG 57.290 43.478 0.00 0.00 0.00 3.35
796 2324 5.190726 CCTTCCCTCCTCTGATATTTATCCC 59.809 48.000 0.00 0.00 31.71 3.85
798 2326 5.932238 TCCCTCCTCTGATATTTATCCCAT 58.068 41.667 0.00 0.00 31.71 4.00
802 2333 6.099557 CCTCCTCTGATATTTATCCCATCCTC 59.900 46.154 0.00 0.00 31.71 3.71
803 2334 6.820205 TCCTCTGATATTTATCCCATCCTCT 58.180 40.000 0.00 0.00 31.71 3.69
806 2337 8.064389 CCTCTGATATTTATCCCATCCTCTCTA 58.936 40.741 0.00 0.00 31.71 2.43
817 2348 7.401060 TCCCATCCTCTCTATCTATCTATCC 57.599 44.000 0.00 0.00 0.00 2.59
818 2349 6.917131 TCCCATCCTCTCTATCTATCTATCCA 59.083 42.308 0.00 0.00 0.00 3.41
819 2350 7.579706 TCCCATCCTCTCTATCTATCTATCCAT 59.420 40.741 0.00 0.00 0.00 3.41
820 2351 7.890127 CCCATCCTCTCTATCTATCTATCCATC 59.110 44.444 0.00 0.00 0.00 3.51
822 2353 8.447200 CATCCTCTCTATCTATCTATCCATCCA 58.553 40.741 0.00 0.00 0.00 3.41
823 2354 8.594417 TCCTCTCTATCTATCTATCCATCCAT 57.406 38.462 0.00 0.00 0.00 3.41
824 2355 8.668653 TCCTCTCTATCTATCTATCCATCCATC 58.331 40.741 0.00 0.00 0.00 3.51
825 2356 8.672329 CCTCTCTATCTATCTATCCATCCATCT 58.328 40.741 0.00 0.00 0.00 2.90
826 2357 9.730705 CTCTCTATCTATCTATCCATCCATCTC 57.269 40.741 0.00 0.00 0.00 2.75
827 2358 9.464379 TCTCTATCTATCTATCCATCCATCTCT 57.536 37.037 0.00 0.00 0.00 3.10
828 2359 9.730705 CTCTATCTATCTATCCATCCATCTCTC 57.269 40.741 0.00 0.00 0.00 3.20
829 2360 9.464379 TCTATCTATCTATCCATCCATCTCTCT 57.536 37.037 0.00 0.00 0.00 3.10
832 2363 8.173774 TCTATCTATCCATCCATCTCTCTTCT 57.826 38.462 0.00 0.00 0.00 2.85
833 2364 8.622870 TCTATCTATCCATCCATCTCTCTTCTT 58.377 37.037 0.00 0.00 0.00 2.52
834 2365 6.914654 TCTATCCATCCATCTCTCTTCTTG 57.085 41.667 0.00 0.00 0.00 3.02
835 2366 6.618501 TCTATCCATCCATCTCTCTTCTTGA 58.381 40.000 0.00 0.00 0.00 3.02
836 2367 7.247500 TCTATCCATCCATCTCTCTTCTTGAT 58.753 38.462 0.00 0.00 0.00 2.57
837 2368 6.766997 ATCCATCCATCTCTCTTCTTGATT 57.233 37.500 0.00 0.00 0.00 2.57
838 2369 6.172136 TCCATCCATCTCTCTTCTTGATTC 57.828 41.667 0.00 0.00 0.00 2.52
839 2370 5.071519 TCCATCCATCTCTCTTCTTGATTCC 59.928 44.000 0.00 0.00 0.00 3.01
856 2387 4.469227 TGATTCCTCTTCTTCTTCCTCTGG 59.531 45.833 0.00 0.00 0.00 3.86
891 2435 1.152368 CTGCTCCCCCATCCAATCC 59.848 63.158 0.00 0.00 0.00 3.01
892 2436 1.622132 TGCTCCCCCATCCAATCCA 60.622 57.895 0.00 0.00 0.00 3.41
893 2437 1.152368 GCTCCCCCATCCAATCCAG 59.848 63.158 0.00 0.00 0.00 3.86
894 2438 1.849116 CTCCCCCATCCAATCCAGG 59.151 63.158 0.00 0.00 0.00 4.45
895 2439 1.701024 TCCCCCATCCAATCCAGGG 60.701 63.158 0.00 0.00 41.12 4.45
930 2476 3.308595 CCACTTTTTCTTGGCCGTTTTTC 59.691 43.478 0.00 0.00 0.00 2.29
933 2479 4.868171 ACTTTTTCTTGGCCGTTTTTCTTC 59.132 37.500 0.00 0.00 0.00 2.87
934 2480 4.729227 TTTTCTTGGCCGTTTTTCTTCT 57.271 36.364 0.00 0.00 0.00 2.85
935 2481 5.838531 TTTTCTTGGCCGTTTTTCTTCTA 57.161 34.783 0.00 0.00 0.00 2.10
936 2482 4.823790 TTCTTGGCCGTTTTTCTTCTAC 57.176 40.909 0.00 0.00 0.00 2.59
937 2483 4.081322 TCTTGGCCGTTTTTCTTCTACT 57.919 40.909 0.00 0.00 0.00 2.57
938 2484 5.217978 TCTTGGCCGTTTTTCTTCTACTA 57.782 39.130 0.00 0.00 0.00 1.82
944 2490 4.376717 GCCGTTTTTCTTCTACTAACACCG 60.377 45.833 0.00 0.00 0.00 4.94
981 2536 2.908073 GCACAACTGAAGCCCACCG 61.908 63.158 0.00 0.00 0.00 4.94
1082 2665 0.846015 CCTTCCATGCCTCCCATACA 59.154 55.000 0.00 0.00 31.47 2.29
1119 2754 1.959282 CCACCAAAGCTCTGCTCTTTT 59.041 47.619 0.00 0.00 38.25 2.27
1120 2755 2.030451 CCACCAAAGCTCTGCTCTTTTC 60.030 50.000 0.00 0.00 38.25 2.29
1121 2756 2.030451 CACCAAAGCTCTGCTCTTTTCC 60.030 50.000 0.00 0.00 38.25 3.13
1122 2757 2.158549 ACCAAAGCTCTGCTCTTTTCCT 60.159 45.455 0.00 0.00 38.25 3.36
1123 2758 2.889678 CCAAAGCTCTGCTCTTTTCCTT 59.110 45.455 0.00 0.00 38.25 3.36
1124 2759 3.305199 CCAAAGCTCTGCTCTTTTCCTTG 60.305 47.826 0.00 0.00 38.25 3.61
1142 2790 1.971695 GTGCTACACCCAACTGCCC 60.972 63.158 0.00 0.00 0.00 5.36
1151 2799 3.279434 CACCCAACTGCCCTTATACTTC 58.721 50.000 0.00 0.00 0.00 3.01
1155 2803 4.444449 CCCAACTGCCCTTATACTTCTACC 60.444 50.000 0.00 0.00 0.00 3.18
1172 2820 5.871396 TCTACCACTAGATCCAATCCAAC 57.129 43.478 0.00 0.00 0.00 3.77
1210 2879 5.007136 GGATTTGTGCTCTCATTACTGCTAC 59.993 44.000 0.00 0.00 0.00 3.58
1211 2880 4.808414 TTGTGCTCTCATTACTGCTACT 57.192 40.909 0.00 0.00 0.00 2.57
1212 2881 4.377839 TGTGCTCTCATTACTGCTACTC 57.622 45.455 0.00 0.00 0.00 2.59
1251 2923 1.765904 TGCAACCCCCTTTCCTTTTTC 59.234 47.619 0.00 0.00 0.00 2.29
1255 2927 3.431411 ACCCCCTTTCCTTTTTCCTTT 57.569 42.857 0.00 0.00 0.00 3.11
1258 2930 4.080015 ACCCCCTTTCCTTTTTCCTTTTTG 60.080 41.667 0.00 0.00 0.00 2.44
1260 2932 4.881273 CCCCTTTCCTTTTTCCTTTTTGTG 59.119 41.667 0.00 0.00 0.00 3.33
1261 2933 5.496556 CCCTTTCCTTTTTCCTTTTTGTGT 58.503 37.500 0.00 0.00 0.00 3.72
1262 2934 5.353956 CCCTTTCCTTTTTCCTTTTTGTGTG 59.646 40.000 0.00 0.00 0.00 3.82
1263 2935 5.937540 CCTTTCCTTTTTCCTTTTTGTGTGT 59.062 36.000 0.00 0.00 0.00 3.72
1265 2937 6.793492 TTCCTTTTTCCTTTTTGTGTGTTG 57.207 33.333 0.00 0.00 0.00 3.33
1274 2946 4.555262 CTTTTTGTGTGTTGGTGTGTTCT 58.445 39.130 0.00 0.00 0.00 3.01
1288 3563 1.741770 GTTCTTCTGTCGGCGGCAT 60.742 57.895 17.12 0.00 0.00 4.40
1313 3601 3.445805 GCGATTTTTATGTTTCTCCCCCA 59.554 43.478 0.00 0.00 0.00 4.96
1314 3602 4.676986 GCGATTTTTATGTTTCTCCCCCAC 60.677 45.833 0.00 0.00 0.00 4.61
1405 3695 4.496336 GCCTCCGGCCTGCTGAAT 62.496 66.667 0.00 0.00 44.06 2.57
1474 3764 0.175760 GCTACACCATCCTGCTCGAA 59.824 55.000 0.00 0.00 0.00 3.71
1546 3839 4.940046 AGGTTCGTCTCGTCTTTATCTGTA 59.060 41.667 0.00 0.00 0.00 2.74
1568 3861 0.176910 TGTCTCGTGTTTGTCTGCCA 59.823 50.000 0.00 0.00 0.00 4.92
1572 3865 1.670811 CTCGTGTTTGTCTGCCAGTTT 59.329 47.619 0.00 0.00 0.00 2.66
1612 3912 1.286880 GCTCATTTGCGTGGTTGCT 59.713 52.632 0.00 0.00 35.36 3.91
1613 3913 0.318955 GCTCATTTGCGTGGTTGCTT 60.319 50.000 0.00 0.00 35.36 3.91
1614 3914 1.689959 CTCATTTGCGTGGTTGCTTC 58.310 50.000 0.00 0.00 35.36 3.86
1615 3915 1.267806 CTCATTTGCGTGGTTGCTTCT 59.732 47.619 0.00 0.00 35.36 2.85
1629 3929 3.648339 TGCTTCTTTCTTGTTGGCATC 57.352 42.857 0.00 0.00 0.00 3.91
1904 4258 6.498651 CCTCCATGGAAGGTACAATAGATAGT 59.501 42.308 17.00 0.00 38.35 2.12
1905 4259 7.016661 CCTCCATGGAAGGTACAATAGATAGTT 59.983 40.741 17.00 0.00 38.35 2.24
1906 4260 9.090103 CTCCATGGAAGGTACAATAGATAGTTA 57.910 37.037 17.00 0.00 0.00 2.24
1907 4261 8.867097 TCCATGGAAGGTACAATAGATAGTTAC 58.133 37.037 13.46 0.00 0.00 2.50
1984 4338 2.262211 GAACAAATCTTCGGCAATGCC 58.738 47.619 15.52 15.52 46.75 4.40
2037 4393 0.950836 TGCATTGAGTTTGGACCACG 59.049 50.000 0.00 0.00 0.00 4.94
2048 4404 3.786516 TTGGACCACGGAAACTTTTTC 57.213 42.857 0.00 0.00 0.00 2.29
2057 4413 3.187842 ACGGAAACTTTTTCTATGGCGAC 59.812 43.478 0.00 0.00 0.00 5.19
2058 4414 3.425758 CGGAAACTTTTTCTATGGCGACC 60.426 47.826 0.00 0.00 0.00 4.79
2059 4415 3.425758 GGAAACTTTTTCTATGGCGACCG 60.426 47.826 0.00 0.00 0.00 4.79
2060 4416 2.754946 ACTTTTTCTATGGCGACCGA 57.245 45.000 0.00 0.00 0.00 4.69
2202 4568 7.447510 AAAGTATTATTAGGGTGGCTGTACT 57.552 36.000 0.00 0.00 0.00 2.73
2258 4627 5.961395 TTGACGACCTATCTTTTATTCGC 57.039 39.130 0.00 0.00 0.00 4.70
2265 4637 7.223387 ACGACCTATCTTTTATTCGCGTTTATT 59.777 33.333 5.77 0.00 0.00 1.40
2266 4638 8.693504 CGACCTATCTTTTATTCGCGTTTATTA 58.306 33.333 5.77 0.00 0.00 0.98
2281 4658 5.275881 GCGTTTATTATGCATTGTGTTCTGC 60.276 40.000 3.54 0.00 38.70 4.26
2282 4659 6.029607 CGTTTATTATGCATTGTGTTCTGCT 58.970 36.000 3.54 0.00 39.16 4.24
2283 4660 6.527722 CGTTTATTATGCATTGTGTTCTGCTT 59.472 34.615 3.54 0.00 39.16 3.91
2437 4825 8.442632 TGATAGATGAACTGGAACATGATTTC 57.557 34.615 0.00 0.00 38.20 2.17
2498 4886 0.400213 TTACAGGTGGCAAGACAGGG 59.600 55.000 0.00 0.00 0.00 4.45
2505 4893 1.812571 GTGGCAAGACAGGGTACAATG 59.187 52.381 0.00 0.00 0.00 2.82
2664 5060 0.035152 GACACACATCCAGCATCCCA 60.035 55.000 0.00 0.00 0.00 4.37
2729 5127 7.955750 AGTATTTATATGCATAAGCCCCCTTTT 59.044 33.333 11.13 0.00 41.13 2.27
2970 5461 6.706270 TGGAAGAAGTATTTATCCGCATCTTC 59.294 38.462 0.00 0.00 40.31 2.87
3090 5582 1.305219 TATGGCCTTTGCACGTGCTC 61.305 55.000 37.59 21.34 42.66 4.26
3488 6013 3.053470 TCCATTGATTGATCTCCTTGCCA 60.053 43.478 0.00 0.00 0.00 4.92
3497 6022 4.922206 TGATCTCCTTGCCATGTTTAACT 58.078 39.130 0.00 0.00 0.00 2.24
3781 6381 1.074566 TGGTATGTTGGTGCCATGACA 59.925 47.619 0.00 0.00 0.00 3.58
3814 6417 4.870363 TCCAAATGCTCACTTTGTTTAGC 58.130 39.130 0.00 0.00 32.83 3.09
4153 6812 2.498167 GTTGCTTGACAGATCACAGGT 58.502 47.619 0.00 0.00 33.38 4.00
4275 6970 0.986019 CACCATACTACCCTGGGGCA 60.986 60.000 18.88 3.17 39.32 5.36
4853 7595 3.713764 AGAGAGACCACAGGAAATATGGG 59.286 47.826 0.00 0.00 37.86 4.00
4854 7596 2.173569 AGAGACCACAGGAAATATGGGC 59.826 50.000 0.00 0.00 42.42 5.36
5124 7866 2.121506 TCCTTGGACCCCCTTGCT 60.122 61.111 0.00 0.00 0.00 3.91
5157 7902 2.894858 GAGACCCACTCTGGAGGAG 58.105 63.158 2.58 0.00 46.87 3.69
5169 7914 5.420421 CACTCTGGAGGAGAAGAAGAATGTA 59.580 44.000 2.58 0.00 44.45 2.29
5180 7925 2.631062 AGAAGAATGTACACGGTGTGGA 59.369 45.455 23.36 10.00 37.94 4.02
5181 7926 3.260884 AGAAGAATGTACACGGTGTGGAT 59.739 43.478 23.36 11.82 37.94 3.41
5184 7929 2.672961 ATGTACACGGTGTGGATGAG 57.327 50.000 23.36 0.00 37.94 2.90
5185 7930 1.334160 TGTACACGGTGTGGATGAGT 58.666 50.000 23.36 0.00 37.94 3.41
5186 7931 1.271379 TGTACACGGTGTGGATGAGTC 59.729 52.381 23.36 4.79 37.94 3.36
5466 8217 2.033662 GGATTTATCAGCTTGCGTCGAC 60.034 50.000 5.18 5.18 0.00 4.20
5492 8243 2.601905 AGGAAAGATGCCAGCAAAAGT 58.398 42.857 0.00 0.00 0.00 2.66
5856 8648 3.391799 ACGGCAAAATATTAACCCCCT 57.608 42.857 0.00 0.00 0.00 4.79
5857 8649 3.293337 ACGGCAAAATATTAACCCCCTC 58.707 45.455 0.00 0.00 0.00 4.30
5858 8650 3.053170 ACGGCAAAATATTAACCCCCTCT 60.053 43.478 0.00 0.00 0.00 3.69
5862 8654 4.387550 GCAAAATATTAACCCCCTCTCCCT 60.388 45.833 0.00 0.00 0.00 4.20
5865 8657 0.728843 ATTAACCCCCTCTCCCTCCA 59.271 55.000 0.00 0.00 0.00 3.86
5866 8658 0.253020 TTAACCCCCTCTCCCTCCAC 60.253 60.000 0.00 0.00 0.00 4.02
5868 8660 4.825679 CCCCCTCTCCCTCCACCC 62.826 77.778 0.00 0.00 0.00 4.61
5870 8662 2.041405 CCCTCTCCCTCCACCCTC 60.041 72.222 0.00 0.00 0.00 4.30
5872 8664 2.780693 CTCTCCCTCCACCCTCCA 59.219 66.667 0.00 0.00 0.00 3.86
5873 8665 1.316266 CTCTCCCTCCACCCTCCAT 59.684 63.158 0.00 0.00 0.00 3.41
5874 8666 1.003442 TCTCCCTCCACCCTCCATG 59.997 63.158 0.00 0.00 0.00 3.66
5887 8705 1.303561 TCCATGCACAGACCAAGGC 60.304 57.895 0.00 0.00 0.00 4.35
5979 8968 6.772716 ACAAACTGATACCAACTTGTCAAGAT 59.227 34.615 19.53 4.39 0.00 2.40
6018 9007 5.759273 TCGAGGTAGTATGAGCTCTTAGTTC 59.241 44.000 18.98 14.63 40.97 3.01
6047 9038 4.168101 TCTGGTCTGGTGTTCTCCTATTT 58.832 43.478 0.00 0.00 0.00 1.40
6159 9150 8.943909 AGGTTTCTTCTTAATATCAGTTACCG 57.056 34.615 0.00 0.00 0.00 4.02
6161 9152 7.279313 GGTTTCTTCTTAATATCAGTTACCGCA 59.721 37.037 0.00 0.00 0.00 5.69
6173 9164 6.621316 TCAGTTACCGCAAAAGAATTGTAA 57.379 33.333 0.00 0.00 0.00 2.41
6197 9350 1.074405 TCTGCTGGATTGCTCAAACCT 59.926 47.619 9.75 0.00 34.70 3.50
6320 9473 0.449786 CAATATCAACACCGCCGCAA 59.550 50.000 0.00 0.00 0.00 4.85
6371 9524 1.003233 CCCAGTACCCACAAGAGTTCC 59.997 57.143 0.00 0.00 0.00 3.62
6584 9737 2.185262 TCGTCGATTGAGCGATTGAAG 58.815 47.619 0.00 0.00 42.82 3.02
6841 9994 2.203153 AAAAGAGGCGCCACGTGT 60.203 55.556 31.54 13.82 0.00 4.49
6890 10043 7.761704 TCAGAAAGTAGAGATGGAAAGAAATCG 59.238 37.037 0.00 0.00 0.00 3.34
7016 10169 0.895530 TACCTCCTGGAAGAAGTGCG 59.104 55.000 0.00 0.00 34.07 5.34
7147 10300 2.343484 ACCATCCATGCATCTGACAG 57.657 50.000 0.00 0.00 0.00 3.51
7163 10316 3.674997 TGACAGCCAGTTGAATTCCTAC 58.325 45.455 2.27 1.38 0.00 3.18
7209 10362 5.789574 ATACTTCCCCTGTTCATTTACCA 57.210 39.130 0.00 0.00 0.00 3.25
7210 10363 4.675063 ACTTCCCCTGTTCATTTACCAT 57.325 40.909 0.00 0.00 0.00 3.55
7216 10369 4.279169 CCCCTGTTCATTTACCATATGCTG 59.721 45.833 0.00 0.00 0.00 4.41
7265 10418 9.952188 GCTGTTTCTCTTCATTAAGTACTTTTT 57.048 29.630 14.49 0.00 34.13 1.94
7284 10437 7.855545 ACTTTTTAGCTCAGATTATATGTGCG 58.144 34.615 7.98 0.00 40.98 5.34
7286 10439 5.722021 TTAGCTCAGATTATATGTGCGGA 57.278 39.130 7.98 0.00 40.98 5.54
7298 10462 1.146637 TGTGCGGAAAAATGCAATGC 58.853 45.000 0.00 0.00 43.75 3.56
7303 10467 3.864583 TGCGGAAAAATGCAATGCTATTC 59.135 39.130 6.82 5.66 38.34 1.75
7307 10471 4.571984 GGAAAAATGCAATGCTATTCCCAC 59.428 41.667 6.82 0.00 0.00 4.61
7311 10475 0.029834 GCAATGCTATTCCCACGCTG 59.970 55.000 0.00 0.00 0.00 5.18
7530 10694 1.072331 CTCCTGCTTACAACCACCACT 59.928 52.381 0.00 0.00 0.00 4.00
7736 10900 3.798014 GATGGATTCCGATGCATCGTCG 61.798 54.545 38.53 27.64 46.53 5.12
7771 10939 4.042062 CCCTGCAGGAGATGGTAATCAATA 59.958 45.833 34.91 0.00 38.24 1.90
7774 10942 6.718454 CCTGCAGGAGATGGTAATCAATAAAT 59.282 38.462 29.88 0.00 37.39 1.40
7778 10946 7.663081 GCAGGAGATGGTAATCAATAAATCTGA 59.337 37.037 0.00 0.00 35.03 3.27
7800 10968 5.696270 TGAGATTATACACTATTGCAAGCGG 59.304 40.000 4.94 0.00 0.00 5.52
7824 10992 2.223044 GCTCATTGCTGTAACTAACCGC 60.223 50.000 0.00 0.00 38.68 5.68
7825 10993 3.000041 CTCATTGCTGTAACTAACCGCA 59.000 45.455 0.00 0.00 45.30 5.69
7962 11621 6.705302 AGAATTGCTCAGTGATGAAACTAGA 58.295 36.000 0.00 0.00 0.00 2.43
7981 11640 8.859236 AACTAGAATAAGTTAGTTTTGTCCCC 57.141 34.615 0.00 0.00 36.90 4.81
8005 11664 9.245962 CCCGAACAGTAGTATAAATCTAGTTTG 57.754 37.037 0.00 0.00 0.00 2.93
8014 11673 7.107542 AGTATAAATCTAGTTTGTTTGGGCGA 58.892 34.615 0.00 0.00 0.00 5.54
8267 12874 9.222916 GTATATATATACTTGCACTGTACGCTG 57.777 37.037 21.00 0.00 36.49 5.18
8270 12877 0.600255 ACTTGCACTGTACGCTGGTC 60.600 55.000 0.00 0.00 0.00 4.02
8271 12878 1.291877 CTTGCACTGTACGCTGGTCC 61.292 60.000 0.00 0.00 0.00 4.46
8345 12957 1.151668 ACACATCAACTCTTGCTCGC 58.848 50.000 0.00 0.00 0.00 5.03
8446 13058 8.576442 ACGGTGAAGAATTACTTTCATGAATTT 58.424 29.630 9.40 1.73 39.13 1.82
8447 13059 9.410556 CGGTGAAGAATTACTTTCATGAATTTT 57.589 29.630 9.40 0.00 39.13 1.82
8522 13181 4.692228 ACATTTTTGAACTCCGCAACAAT 58.308 34.783 0.00 0.00 0.00 2.71
8527 13186 4.377839 TTGAACTCCGCAACAATCAAAA 57.622 36.364 0.00 0.00 0.00 2.44
8546 13205 1.775385 AAAACATTATGGGGCGGAGG 58.225 50.000 0.00 0.00 0.00 4.30
8547 13206 0.106217 AAACATTATGGGGCGGAGGG 60.106 55.000 0.00 0.00 0.00 4.30
8548 13207 0.991355 AACATTATGGGGCGGAGGGA 60.991 55.000 0.00 0.00 0.00 4.20
8586 13328 7.586714 GGAAGAGCAAATATTCCAAACAAAG 57.413 36.000 0.00 0.00 46.72 2.77
8587 13329 7.378181 GGAAGAGCAAATATTCCAAACAAAGA 58.622 34.615 0.00 0.00 46.72 2.52
8589 13331 6.928520 AGAGCAAATATTCCAAACAAAGAGG 58.071 36.000 0.00 0.00 0.00 3.69
8590 13332 6.721208 AGAGCAAATATTCCAAACAAAGAGGA 59.279 34.615 0.00 0.00 0.00 3.71
8591 13333 6.691508 AGCAAATATTCCAAACAAAGAGGAC 58.308 36.000 0.00 0.00 0.00 3.85
8592 13334 5.572896 GCAAATATTCCAAACAAAGAGGACG 59.427 40.000 0.00 0.00 0.00 4.79
8593 13335 6.677913 CAAATATTCCAAACAAAGAGGACGT 58.322 36.000 0.00 0.00 0.00 4.34
8594 13336 6.496338 AATATTCCAAACAAAGAGGACGTC 57.504 37.500 7.13 7.13 0.00 4.34
8595 13337 2.249844 TCCAAACAAAGAGGACGTCC 57.750 50.000 27.67 27.67 0.00 4.79
8605 13347 3.914984 AGGACGTCCTGACAACATG 57.085 52.632 35.89 0.00 46.55 3.21
8606 13348 1.048601 AGGACGTCCTGACAACATGT 58.951 50.000 35.89 8.17 46.55 3.21
8607 13349 1.416401 AGGACGTCCTGACAACATGTT 59.584 47.619 35.89 4.92 46.55 2.71
8608 13350 2.631062 AGGACGTCCTGACAACATGTTA 59.369 45.455 35.89 0.00 46.55 2.41
8609 13351 3.260884 AGGACGTCCTGACAACATGTTAT 59.739 43.478 35.89 6.87 46.55 1.89
8610 13352 4.000988 GGACGTCCTGACAACATGTTATT 58.999 43.478 27.64 0.64 0.00 1.40
8611 13353 5.046878 AGGACGTCCTGACAACATGTTATTA 60.047 40.000 35.89 0.00 46.55 0.98
8612 13354 5.640357 GGACGTCCTGACAACATGTTATTAA 59.360 40.000 27.64 0.00 0.00 1.40
8613 13355 6.183360 GGACGTCCTGACAACATGTTATTAAG 60.183 42.308 27.64 6.75 0.00 1.85
8780 13522 2.950975 TCAGTGTGCTTGCTTGATCAAA 59.049 40.909 9.88 0.00 0.00 2.69
8825 13567 9.062524 TGCAACAGTAAAGAAAAGAAGCTATTA 57.937 29.630 0.00 0.00 0.00 0.98
8850 13593 8.193953 ACCCATGTAAAGATCAAGTGATTTTT 57.806 30.769 12.73 12.73 40.51 1.94
8852 13595 7.546667 CCCATGTAAAGATCAAGTGATTTTTGG 59.453 37.037 16.16 10.99 38.68 3.28
8853 13596 8.090214 CCATGTAAAGATCAAGTGATTTTTGGT 58.910 33.333 16.16 3.84 38.68 3.67
8854 13597 9.132521 CATGTAAAGATCAAGTGATTTTTGGTC 57.867 33.333 16.16 9.39 38.68 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
11 12 4.336433 TCAACTATATTCTTTGCAGGCAGC 59.664 41.667 0.00 0.00 45.96 5.25
30 31 5.536916 AGATAGGTACTGGTAGATGCTCAAC 59.463 44.000 0.00 0.00 41.52 3.18
32 33 5.326283 AGATAGGTACTGGTAGATGCTCA 57.674 43.478 0.00 0.00 41.52 4.26
45 49 7.224949 GGTTTTGATTGACAGCTAGATAGGTAC 59.775 40.741 0.00 0.00 31.93 3.34
46 50 7.093068 TGGTTTTGATTGACAGCTAGATAGGTA 60.093 37.037 0.00 0.00 31.93 3.08
68 77 2.239681 TTTGGTCCAGTGGTTTGGTT 57.760 45.000 9.54 0.00 39.35 3.67
80 89 1.899142 TGGCTGGCTTTAATTTGGTCC 59.101 47.619 2.00 0.00 0.00 4.46
81 90 3.195396 TGATGGCTGGCTTTAATTTGGTC 59.805 43.478 2.00 0.00 0.00 4.02
94 103 0.319083 TTGCTTTGCTTGATGGCTGG 59.681 50.000 0.00 0.00 0.00 4.85
115 124 0.326264 GAGCCCAGGAAGAAGCTTCA 59.674 55.000 27.57 0.00 35.23 3.02
119 133 1.223211 GGAGAGCCCAGGAAGAAGC 59.777 63.158 0.00 0.00 34.14 3.86
153 167 9.331282 GTTAGCTGATTAAGTTGGTGAGATTAT 57.669 33.333 0.00 0.00 0.00 1.28
183 201 7.123547 GGATGGAGGTTATGTTGGTAATTTTGA 59.876 37.037 0.00 0.00 0.00 2.69
185 203 7.189087 AGGATGGAGGTTATGTTGGTAATTTT 58.811 34.615 0.00 0.00 0.00 1.82
207 226 2.590611 ACTACCAGATTACCAGGGAGGA 59.409 50.000 0.00 0.00 37.71 3.71
253 272 5.882000 TGGCATGGCATATAAGCAATACTAG 59.118 40.000 19.43 0.00 35.83 2.57
259 278 2.664015 TGTGGCATGGCATATAAGCAA 58.336 42.857 26.07 0.00 35.83 3.91
321 372 5.047377 TGGAATGGGAGCAAAACTACAAATC 60.047 40.000 0.00 0.00 0.00 2.17
328 387 3.261643 GGAAATGGAATGGGAGCAAAACT 59.738 43.478 0.00 0.00 0.00 2.66
337 396 1.008206 TGGGAAGGGAAATGGAATGGG 59.992 52.381 0.00 0.00 0.00 4.00
338 397 2.391678 CTGGGAAGGGAAATGGAATGG 58.608 52.381 0.00 0.00 0.00 3.16
339 398 2.391678 CCTGGGAAGGGAAATGGAATG 58.608 52.381 0.00 0.00 0.00 2.67
342 401 0.850883 AGCCTGGGAAGGGAAATGGA 60.851 55.000 0.00 0.00 0.00 3.41
344 403 0.040204 ACAGCCTGGGAAGGGAAATG 59.960 55.000 0.00 0.00 0.00 2.32
345 404 0.332972 GACAGCCTGGGAAGGGAAAT 59.667 55.000 0.00 0.00 0.00 2.17
351 410 1.341156 CCCCTAGACAGCCTGGGAAG 61.341 65.000 0.00 0.00 45.62 3.46
386 459 3.309954 GTGCCAACAACCTAAGATCGATC 59.690 47.826 17.91 17.91 0.00 3.69
387 460 3.055094 AGTGCCAACAACCTAAGATCGAT 60.055 43.478 0.00 0.00 0.00 3.59
388 461 2.301870 AGTGCCAACAACCTAAGATCGA 59.698 45.455 0.00 0.00 0.00 3.59
389 462 2.699954 AGTGCCAACAACCTAAGATCG 58.300 47.619 0.00 0.00 0.00 3.69
390 463 4.072131 TCAAGTGCCAACAACCTAAGATC 58.928 43.478 0.00 0.00 0.00 2.75
391 464 4.098914 TCAAGTGCCAACAACCTAAGAT 57.901 40.909 0.00 0.00 0.00 2.40
392 465 3.569194 TCAAGTGCCAACAACCTAAGA 57.431 42.857 0.00 0.00 0.00 2.10
393 466 4.074970 AGATCAAGTGCCAACAACCTAAG 58.925 43.478 0.00 0.00 0.00 2.18
394 467 4.098914 AGATCAAGTGCCAACAACCTAA 57.901 40.909 0.00 0.00 0.00 2.69
465 547 2.096248 CTACTCCACTCCACTCCACTC 58.904 57.143 0.00 0.00 0.00 3.51
469 551 1.205893 CAAGCTACTCCACTCCACTCC 59.794 57.143 0.00 0.00 0.00 3.85
470 552 2.171840 TCAAGCTACTCCACTCCACTC 58.828 52.381 0.00 0.00 0.00 3.51
471 553 2.310779 TCAAGCTACTCCACTCCACT 57.689 50.000 0.00 0.00 0.00 4.00
472 554 3.402628 TTTCAAGCTACTCCACTCCAC 57.597 47.619 0.00 0.00 0.00 4.02
473 555 3.055094 GGATTTCAAGCTACTCCACTCCA 60.055 47.826 0.00 0.00 0.00 3.86
474 556 3.198853 AGGATTTCAAGCTACTCCACTCC 59.801 47.826 0.00 0.00 0.00 3.85
475 557 4.479786 AGGATTTCAAGCTACTCCACTC 57.520 45.455 0.00 0.00 0.00 3.51
476 558 6.567602 ATTAGGATTTCAAGCTACTCCACT 57.432 37.500 0.00 0.00 0.00 4.00
477 559 8.732746 TTTATTAGGATTTCAAGCTACTCCAC 57.267 34.615 0.00 0.00 0.00 4.02
478 560 9.174166 GTTTTATTAGGATTTCAAGCTACTCCA 57.826 33.333 0.00 0.00 0.00 3.86
479 561 8.622157 GGTTTTATTAGGATTTCAAGCTACTCC 58.378 37.037 0.00 0.00 0.00 3.85
480 562 8.336080 CGGTTTTATTAGGATTTCAAGCTACTC 58.664 37.037 0.00 0.00 0.00 2.59
485 567 5.041287 GGCGGTTTTATTAGGATTTCAAGC 58.959 41.667 0.00 0.00 0.00 4.01
489 571 5.488645 TTCGGCGGTTTTATTAGGATTTC 57.511 39.130 7.21 0.00 0.00 2.17
506 588 3.575965 AATCCAGTTGTGATTTTCGGC 57.424 42.857 0.00 0.00 0.00 5.54
531 614 2.668144 TCAGTGGTTTAAAGGGTGGG 57.332 50.000 0.00 0.00 0.00 4.61
539 622 4.742012 TGGCCCTTTAATCAGTGGTTTAA 58.258 39.130 0.00 0.00 0.00 1.52
541 624 3.252554 TGGCCCTTTAATCAGTGGTTT 57.747 42.857 0.00 0.00 0.00 3.27
542 625 2.990740 TGGCCCTTTAATCAGTGGTT 57.009 45.000 0.00 0.00 0.00 3.67
543 626 3.473113 AATGGCCCTTTAATCAGTGGT 57.527 42.857 0.00 0.00 0.00 4.16
545 628 6.119536 TGTACTAATGGCCCTTTAATCAGTG 58.880 40.000 0.00 0.00 0.00 3.66
546 629 6.321821 TGTACTAATGGCCCTTTAATCAGT 57.678 37.500 0.00 0.00 0.00 3.41
547 630 6.263168 CCTTGTACTAATGGCCCTTTAATCAG 59.737 42.308 0.00 0.00 0.00 2.90
548 631 6.069323 TCCTTGTACTAATGGCCCTTTAATCA 60.069 38.462 0.00 0.00 0.00 2.57
549 632 6.362248 TCCTTGTACTAATGGCCCTTTAATC 58.638 40.000 0.00 0.00 0.00 1.75
550 633 6.335781 TCCTTGTACTAATGGCCCTTTAAT 57.664 37.500 0.00 0.00 0.00 1.40
552 635 5.252164 ACTTCCTTGTACTAATGGCCCTTTA 59.748 40.000 0.00 0.00 0.00 1.85
553 636 4.044191 ACTTCCTTGTACTAATGGCCCTTT 59.956 41.667 0.00 0.00 0.00 3.11
555 638 3.190439 ACTTCCTTGTACTAATGGCCCT 58.810 45.455 0.00 0.00 0.00 5.19
558 641 4.395231 GGTGAACTTCCTTGTACTAATGGC 59.605 45.833 0.00 0.00 0.00 4.40
559 642 4.941873 GGGTGAACTTCCTTGTACTAATGG 59.058 45.833 0.00 0.00 0.00 3.16
562 645 4.903049 TGAGGGTGAACTTCCTTGTACTAA 59.097 41.667 0.00 0.00 32.74 2.24
563 646 4.485875 TGAGGGTGAACTTCCTTGTACTA 58.514 43.478 0.00 0.00 32.74 1.82
564 647 3.314693 TGAGGGTGAACTTCCTTGTACT 58.685 45.455 0.00 0.00 32.74 2.73
565 648 3.764237 TGAGGGTGAACTTCCTTGTAC 57.236 47.619 0.00 0.00 32.74 2.90
566 649 3.456644 TGTTGAGGGTGAACTTCCTTGTA 59.543 43.478 0.00 0.00 32.74 2.41
567 650 2.241176 TGTTGAGGGTGAACTTCCTTGT 59.759 45.455 0.00 0.00 32.74 3.16
568 651 2.930950 TGTTGAGGGTGAACTTCCTTG 58.069 47.619 0.00 0.00 32.74 3.61
569 652 3.662759 TTGTTGAGGGTGAACTTCCTT 57.337 42.857 0.00 0.00 32.74 3.36
574 657 3.829601 TGTTTGTTTGTTGAGGGTGAACT 59.170 39.130 0.00 0.00 0.00 3.01
575 658 4.181309 TGTTTGTTTGTTGAGGGTGAAC 57.819 40.909 0.00 0.00 0.00 3.18
576 659 4.873746 TTGTTTGTTTGTTGAGGGTGAA 57.126 36.364 0.00 0.00 0.00 3.18
577 660 4.039245 TGTTTGTTTGTTTGTTGAGGGTGA 59.961 37.500 0.00 0.00 0.00 4.02
580 663 5.237344 TGTTTGTTTGTTTGTTTGTTGAGGG 59.763 36.000 0.00 0.00 0.00 4.30
581 664 6.292389 TGTTTGTTTGTTTGTTTGTTGAGG 57.708 33.333 0.00 0.00 0.00 3.86
585 668 6.470556 GCTGTTTGTTTGTTTGTTTGTTTGTT 59.529 30.769 0.00 0.00 0.00 2.83
586 669 5.968261 GCTGTTTGTTTGTTTGTTTGTTTGT 59.032 32.000 0.00 0.00 0.00 2.83
587 670 6.197981 AGCTGTTTGTTTGTTTGTTTGTTTG 58.802 32.000 0.00 0.00 0.00 2.93
588 671 6.370433 AGCTGTTTGTTTGTTTGTTTGTTT 57.630 29.167 0.00 0.00 0.00 2.83
589 672 6.037610 TGAAGCTGTTTGTTTGTTTGTTTGTT 59.962 30.769 0.00 0.00 0.00 2.83
590 673 5.525378 TGAAGCTGTTTGTTTGTTTGTTTGT 59.475 32.000 0.00 0.00 0.00 2.83
612 695 2.968574 AGACTTCAAGACTCCAAGCTGA 59.031 45.455 0.00 0.00 0.00 4.26
619 702 4.502962 CATCTCCAAGACTTCAAGACTCC 58.497 47.826 0.00 0.00 0.00 3.85
623 706 4.020751 CAGTCCATCTCCAAGACTTCAAGA 60.021 45.833 0.00 0.00 38.80 3.02
624 707 4.252073 CAGTCCATCTCCAAGACTTCAAG 58.748 47.826 0.00 0.00 38.80 3.02
625 708 3.557898 GCAGTCCATCTCCAAGACTTCAA 60.558 47.826 0.00 0.00 38.80 2.69
626 709 2.027745 GCAGTCCATCTCCAAGACTTCA 60.028 50.000 0.00 0.00 38.80 3.02
627 710 2.027745 TGCAGTCCATCTCCAAGACTTC 60.028 50.000 0.00 0.00 38.80 3.01
628 711 1.980765 TGCAGTCCATCTCCAAGACTT 59.019 47.619 0.00 0.00 38.80 3.01
629 712 1.277557 GTGCAGTCCATCTCCAAGACT 59.722 52.381 0.00 0.00 41.49 3.24
630 713 1.002430 TGTGCAGTCCATCTCCAAGAC 59.998 52.381 0.00 0.00 0.00 3.01
631 714 1.351076 TGTGCAGTCCATCTCCAAGA 58.649 50.000 0.00 0.00 0.00 3.02
633 716 1.065199 GGATGTGCAGTCCATCTCCAA 60.065 52.381 13.62 0.00 38.95 3.53
634 717 0.543277 GGATGTGCAGTCCATCTCCA 59.457 55.000 13.62 0.00 38.95 3.86
678 2166 7.634718 TCTGATTAGTGAGAGAGAGGACTTTA 58.365 38.462 0.00 0.00 0.00 1.85
683 2171 6.667661 TGATTCTGATTAGTGAGAGAGAGGA 58.332 40.000 0.00 0.00 0.00 3.71
684 2172 6.016024 CCTGATTCTGATTAGTGAGAGAGAGG 60.016 46.154 0.00 0.00 0.00 3.69
697 2222 3.054582 TGCTTCTGCTCCTGATTCTGATT 60.055 43.478 0.00 0.00 40.48 2.57
699 2224 1.904537 TGCTTCTGCTCCTGATTCTGA 59.095 47.619 0.00 0.00 40.48 3.27
703 2228 1.407162 GCTCTGCTTCTGCTCCTGATT 60.407 52.381 0.00 0.00 40.48 2.57
705 2230 1.190178 TGCTCTGCTTCTGCTCCTGA 61.190 55.000 0.00 0.00 40.48 3.86
715 2240 0.686224 AGAGTGCTTCTGCTCTGCTT 59.314 50.000 0.00 0.00 42.27 3.91
717 2242 0.247185 AGAGAGTGCTTCTGCTCTGC 59.753 55.000 0.00 0.00 42.27 4.26
718 2243 2.609350 GAAGAGAGTGCTTCTGCTCTG 58.391 52.381 0.00 0.00 42.27 3.35
719 2244 1.550072 GGAAGAGAGTGCTTCTGCTCT 59.450 52.381 0.00 0.00 44.51 4.09
720 2245 1.550072 AGGAAGAGAGTGCTTCTGCTC 59.450 52.381 0.00 0.00 42.96 4.26
721 2246 1.550072 GAGGAAGAGAGTGCTTCTGCT 59.450 52.381 0.00 0.00 42.96 4.24
722 2247 1.405391 GGAGGAAGAGAGTGCTTCTGC 60.405 57.143 0.00 0.00 42.96 4.26
723 2248 1.206849 GGGAGGAAGAGAGTGCTTCTG 59.793 57.143 0.00 0.00 42.96 3.02
724 2249 1.567357 GGGAGGAAGAGAGTGCTTCT 58.433 55.000 0.00 0.00 42.96 2.85
725 2250 0.539518 GGGGAGGAAGAGAGTGCTTC 59.460 60.000 0.00 0.00 42.73 3.86
726 2251 0.912006 GGGGGAGGAAGAGAGTGCTT 60.912 60.000 0.00 0.00 0.00 3.91
727 2252 1.306568 GGGGGAGGAAGAGAGTGCT 60.307 63.158 0.00 0.00 0.00 4.40
769 2297 4.852991 AATATCAGAGGAGGGAAGGGTA 57.147 45.455 0.00 0.00 0.00 3.69
770 2298 3.734344 AATATCAGAGGAGGGAAGGGT 57.266 47.619 0.00 0.00 0.00 4.34
771 2299 5.190726 GGATAAATATCAGAGGAGGGAAGGG 59.809 48.000 3.07 0.00 34.40 3.95
772 2300 5.190726 GGGATAAATATCAGAGGAGGGAAGG 59.809 48.000 3.07 0.00 34.40 3.46
773 2301 5.787494 TGGGATAAATATCAGAGGAGGGAAG 59.213 44.000 3.07 0.00 34.40 3.46
776 2304 5.131809 GGATGGGATAAATATCAGAGGAGGG 59.868 48.000 3.07 0.00 34.40 4.30
777 2305 5.969402 AGGATGGGATAAATATCAGAGGAGG 59.031 44.000 3.07 0.00 34.40 4.30
778 2306 6.902416 AGAGGATGGGATAAATATCAGAGGAG 59.098 42.308 3.07 0.00 34.40 3.69
779 2307 6.820205 AGAGGATGGGATAAATATCAGAGGA 58.180 40.000 3.07 0.00 34.40 3.71
781 2309 7.976414 AGAGAGGATGGGATAAATATCAGAG 57.024 40.000 3.07 0.00 34.40 3.35
782 2310 9.653516 GATAGAGAGGATGGGATAAATATCAGA 57.346 37.037 3.07 0.00 34.40 3.27
783 2311 9.659135 AGATAGAGAGGATGGGATAAATATCAG 57.341 37.037 3.07 0.00 34.40 2.90
796 2324 8.447200 TGGATGGATAGATAGATAGAGAGGATG 58.553 40.741 0.00 0.00 0.00 3.51
798 2326 8.594417 ATGGATGGATAGATAGATAGAGAGGA 57.406 38.462 0.00 0.00 0.00 3.71
802 2333 9.730705 GAGAGATGGATGGATAGATAGATAGAG 57.269 40.741 0.00 0.00 0.00 2.43
803 2334 9.464379 AGAGAGATGGATGGATAGATAGATAGA 57.536 37.037 0.00 0.00 0.00 1.98
806 2337 8.794707 AGAAGAGAGATGGATGGATAGATAGAT 58.205 37.037 0.00 0.00 0.00 1.98
815 2346 5.071519 GGAATCAAGAAGAGAGATGGATGGA 59.928 44.000 0.00 0.00 0.00 3.41
817 2348 6.042322 AGAGGAATCAAGAAGAGAGATGGATG 59.958 42.308 0.00 0.00 0.00 3.51
818 2349 6.145336 AGAGGAATCAAGAAGAGAGATGGAT 58.855 40.000 0.00 0.00 0.00 3.41
819 2350 5.527385 AGAGGAATCAAGAAGAGAGATGGA 58.473 41.667 0.00 0.00 0.00 3.41
820 2351 5.874897 AGAGGAATCAAGAAGAGAGATGG 57.125 43.478 0.00 0.00 0.00 3.51
822 2353 7.620888 AGAAGAAGAGGAATCAAGAAGAGAGAT 59.379 37.037 0.00 0.00 0.00 2.75
823 2354 6.953520 AGAAGAAGAGGAATCAAGAAGAGAGA 59.046 38.462 0.00 0.00 0.00 3.10
824 2355 7.174107 AGAAGAAGAGGAATCAAGAAGAGAG 57.826 40.000 0.00 0.00 0.00 3.20
825 2356 7.310361 GGAAGAAGAAGAGGAATCAAGAAGAGA 60.310 40.741 0.00 0.00 0.00 3.10
826 2357 6.818142 GGAAGAAGAAGAGGAATCAAGAAGAG 59.182 42.308 0.00 0.00 0.00 2.85
827 2358 6.500049 AGGAAGAAGAAGAGGAATCAAGAAGA 59.500 38.462 0.00 0.00 0.00 2.87
828 2359 6.710278 AGGAAGAAGAAGAGGAATCAAGAAG 58.290 40.000 0.00 0.00 0.00 2.85
829 2360 6.500049 AGAGGAAGAAGAAGAGGAATCAAGAA 59.500 38.462 0.00 0.00 0.00 2.52
830 2361 6.022315 AGAGGAAGAAGAAGAGGAATCAAGA 58.978 40.000 0.00 0.00 0.00 3.02
831 2362 6.108015 CAGAGGAAGAAGAAGAGGAATCAAG 58.892 44.000 0.00 0.00 0.00 3.02
832 2363 5.046014 CCAGAGGAAGAAGAAGAGGAATCAA 60.046 44.000 0.00 0.00 0.00 2.57
833 2364 4.469227 CCAGAGGAAGAAGAAGAGGAATCA 59.531 45.833 0.00 0.00 0.00 2.57
834 2365 4.714308 TCCAGAGGAAGAAGAAGAGGAATC 59.286 45.833 0.00 0.00 0.00 2.52
835 2366 4.693420 TCCAGAGGAAGAAGAAGAGGAAT 58.307 43.478 0.00 0.00 0.00 3.01
836 2367 4.133526 TCCAGAGGAAGAAGAAGAGGAA 57.866 45.455 0.00 0.00 0.00 3.36
837 2368 3.835478 TCCAGAGGAAGAAGAAGAGGA 57.165 47.619 0.00 0.00 0.00 3.71
838 2369 3.387699 GGATCCAGAGGAAGAAGAAGAGG 59.612 52.174 6.95 0.00 34.34 3.69
839 2370 4.289245 AGGATCCAGAGGAAGAAGAAGAG 58.711 47.826 15.82 0.00 34.34 2.85
856 2387 1.202382 GCAGGAGCAAATGCAAGGATC 60.202 52.381 8.28 0.00 45.16 3.36
891 2435 2.922234 GGAATCTCCCTGCCCCTG 59.078 66.667 0.00 0.00 0.00 4.45
930 2476 1.471684 AGCCGACGGTGTTAGTAGAAG 59.528 52.381 16.73 0.00 0.00 2.85
933 2479 0.801067 GCAGCCGACGGTGTTAGTAG 60.801 60.000 16.73 0.00 39.77 2.57
934 2480 1.213537 GCAGCCGACGGTGTTAGTA 59.786 57.895 16.73 0.00 39.77 1.82
935 2481 2.048503 GCAGCCGACGGTGTTAGT 60.049 61.111 16.73 0.00 39.77 2.24
936 2482 2.813908 GGCAGCCGACGGTGTTAG 60.814 66.667 16.73 2.44 39.77 2.34
964 2510 1.227823 TCGGTGGGCTTCAGTTGTG 60.228 57.895 0.00 0.00 0.00 3.33
1119 2754 1.136828 AGTTGGGTGTAGCACAAGGA 58.863 50.000 1.61 0.00 41.85 3.36
1120 2755 1.238439 CAGTTGGGTGTAGCACAAGG 58.762 55.000 1.61 0.00 41.85 3.61
1121 2756 0.593128 GCAGTTGGGTGTAGCACAAG 59.407 55.000 1.61 0.00 41.85 3.16
1122 2757 0.821711 GGCAGTTGGGTGTAGCACAA 60.822 55.000 1.61 0.00 38.34 3.33
1123 2758 1.228124 GGCAGTTGGGTGTAGCACA 60.228 57.895 1.61 0.00 35.86 4.57
1124 2759 1.971695 GGGCAGTTGGGTGTAGCAC 60.972 63.158 0.00 0.00 0.00 4.40
1151 2799 4.656112 AGGTTGGATTGGATCTAGTGGTAG 59.344 45.833 0.00 0.00 0.00 3.18
1155 2803 6.240549 AGTAAGGTTGGATTGGATCTAGTG 57.759 41.667 0.00 0.00 0.00 2.74
1172 2820 4.260784 GCACAAATCCAGCGATAAGTAAGG 60.261 45.833 0.00 0.00 0.00 2.69
1210 2879 4.201792 GCAGATTGCAATGCGATATAGGAG 60.202 45.833 18.59 0.00 44.26 3.69
1211 2880 3.686241 GCAGATTGCAATGCGATATAGGA 59.314 43.478 18.59 0.00 44.26 2.94
1212 2881 4.012319 GCAGATTGCAATGCGATATAGG 57.988 45.455 18.59 0.00 44.26 2.57
1251 2923 3.311486 ACACACCAACACACAAAAAGG 57.689 42.857 0.00 0.00 0.00 3.11
1255 2927 3.823873 AGAAGAACACACCAACACACAAA 59.176 39.130 0.00 0.00 0.00 2.83
1258 2930 2.747446 ACAGAAGAACACACCAACACAC 59.253 45.455 0.00 0.00 0.00 3.82
1260 2932 2.030457 CGACAGAAGAACACACCAACAC 59.970 50.000 0.00 0.00 0.00 3.32
1261 2933 2.276201 CGACAGAAGAACACACCAACA 58.724 47.619 0.00 0.00 0.00 3.33
1262 2934 1.597663 CCGACAGAAGAACACACCAAC 59.402 52.381 0.00 0.00 0.00 3.77
1263 2935 1.948104 CCGACAGAAGAACACACCAA 58.052 50.000 0.00 0.00 0.00 3.67
1265 2937 1.557443 CGCCGACAGAAGAACACACC 61.557 60.000 0.00 0.00 0.00 4.16
1274 2946 2.125552 CTGATGCCGCCGACAGAA 60.126 61.111 0.00 0.00 32.90 3.02
1288 3563 4.398044 GGGGAGAAACATAAAAATCGCTGA 59.602 41.667 0.00 0.00 0.00 4.26
1293 3568 6.605471 AAGTGGGGGAGAAACATAAAAATC 57.395 37.500 0.00 0.00 0.00 2.17
1329 3617 9.941325 TCAAATCACACCTGCAATAAATAAAAT 57.059 25.926 0.00 0.00 0.00 1.82
1330 3618 9.941325 ATCAAATCACACCTGCAATAAATAAAA 57.059 25.926 0.00 0.00 0.00 1.52
1331 3619 9.941325 AATCAAATCACACCTGCAATAAATAAA 57.059 25.926 0.00 0.00 0.00 1.40
1332 3620 9.368674 CAATCAAATCACACCTGCAATAAATAA 57.631 29.630 0.00 0.00 0.00 1.40
1333 3621 8.530311 ACAATCAAATCACACCTGCAATAAATA 58.470 29.630 0.00 0.00 0.00 1.40
1402 3692 1.814169 GTGGGCGACGAAGGGATTC 60.814 63.158 0.00 0.00 0.00 2.52
1546 3839 1.806623 GCAGACAAACACGAGACACCT 60.807 52.381 0.00 0.00 0.00 4.00
1612 3912 3.565307 ACCTGATGCCAACAAGAAAGAA 58.435 40.909 0.00 0.00 0.00 2.52
1613 3913 3.228188 ACCTGATGCCAACAAGAAAGA 57.772 42.857 0.00 0.00 0.00 2.52
1614 3914 3.610114 CGAACCTGATGCCAACAAGAAAG 60.610 47.826 0.00 0.00 0.00 2.62
1615 3915 2.293122 CGAACCTGATGCCAACAAGAAA 59.707 45.455 0.00 0.00 0.00 2.52
1629 3929 0.595567 TCACGAAACGGACGAACCTG 60.596 55.000 0.00 0.00 36.31 4.00
1656 3956 3.999285 ACCCGCTCCAGGACCTCT 61.999 66.667 0.00 0.00 0.00 3.69
1783 4091 7.575155 GCAGTCAGTGTCAAGTAAGTATGAGTA 60.575 40.741 0.00 0.00 0.00 2.59
1784 4092 6.682746 CAGTCAGTGTCAAGTAAGTATGAGT 58.317 40.000 0.00 0.00 0.00 3.41
1785 4093 5.574830 GCAGTCAGTGTCAAGTAAGTATGAG 59.425 44.000 0.00 0.00 0.00 2.90
1786 4094 5.010617 TGCAGTCAGTGTCAAGTAAGTATGA 59.989 40.000 0.00 0.00 0.00 2.15
1787 4095 5.230182 TGCAGTCAGTGTCAAGTAAGTATG 58.770 41.667 0.00 0.00 0.00 2.39
1788 4096 5.243954 TCTGCAGTCAGTGTCAAGTAAGTAT 59.756 40.000 14.67 0.00 41.10 2.12
1906 4260 9.396022 AGAAATGAAATGAAATCGGTAGTATGT 57.604 29.630 0.00 0.00 0.00 2.29
1907 4261 9.655769 CAGAAATGAAATGAAATCGGTAGTATG 57.344 33.333 0.00 0.00 0.00 2.39
1950 4304 5.171476 AGATTTGTTCGTGGATACTGTGAG 58.829 41.667 0.00 0.00 37.61 3.51
2011 4367 0.771756 CAAACTCAATGCAACGCACG 59.228 50.000 0.00 0.00 43.04 5.34
2021 4377 2.621526 GTTTCCGTGGTCCAAACTCAAT 59.378 45.455 0.00 0.00 0.00 2.57
2037 4393 3.425758 CGGTCGCCATAGAAAAAGTTTCC 60.426 47.826 0.00 0.00 0.00 3.13
2149 4513 4.680708 CGTCCACTATCATGCACCTAACTT 60.681 45.833 0.00 0.00 0.00 2.66
2202 4568 4.522405 CACATTGTCATTTCCCCTGTACAA 59.478 41.667 0.00 0.00 0.00 2.41
2258 4627 6.029607 AGCAGAACACAATGCATAATAAACG 58.970 36.000 0.00 0.00 45.01 3.60
2437 4825 1.082366 CAACGGAAAAAGGGACGCG 60.082 57.895 3.53 3.53 0.00 6.01
2498 4886 4.023707 GCCTTATCACCATCAGCATTGTAC 60.024 45.833 0.00 0.00 0.00 2.90
2505 4893 2.338577 AGTGCCTTATCACCATCAGC 57.661 50.000 0.00 0.00 37.68 4.26
2664 5060 0.317160 TCCGTCGTCATTCTGCAGTT 59.683 50.000 14.67 0.00 0.00 3.16
2729 5127 6.207417 GTCTTCAAGGAAAACATCATGGAGAA 59.793 38.462 0.00 0.00 34.57 2.87
2792 5194 6.515272 AAAAGAATTATGACGGTGCAGATT 57.485 33.333 0.00 0.00 0.00 2.40
2793 5195 6.515272 AAAAAGAATTATGACGGTGCAGAT 57.485 33.333 0.00 0.00 0.00 2.90
2962 5453 4.317139 CGATTAACACCTTACGAAGATGCG 60.317 45.833 0.00 0.00 37.29 4.73
3090 5582 5.221521 TGTCTATATCAAACCCAGCAGCTAG 60.222 44.000 0.00 0.00 0.00 3.42
3210 5702 8.489489 AGGCTCACATTATCAATTATCCGATAT 58.511 33.333 0.00 0.00 0.00 1.63
3781 6381 8.409358 AAGTGAGCATTTGGAAAGTAAGTTAT 57.591 30.769 0.00 0.00 0.00 1.89
3829 6433 7.641411 CAGATAACAAAATCCGCTTATCAACTG 59.359 37.037 0.00 0.00 30.88 3.16
3931 6582 6.583562 AGGCGGCTGTATATTAGGAATAATC 58.416 40.000 12.25 0.00 0.00 1.75
4153 6812 1.841302 GCTCCTGGGTGGTGATGTGA 61.841 60.000 0.00 0.00 37.07 3.58
4194 6853 5.192321 TGGTGGATATCCTGATTGATATGGG 59.808 44.000 22.35 0.00 37.91 4.00
4275 6970 3.061369 GGGAGGAGGGTAATATGGGTTT 58.939 50.000 0.00 0.00 0.00 3.27
4853 7595 4.327627 GCTCGGATAAAAGAATAGGATCGC 59.672 45.833 0.00 0.00 0.00 4.58
4854 7596 4.559251 CGCTCGGATAAAAGAATAGGATCG 59.441 45.833 0.00 0.00 0.00 3.69
5085 7827 1.355720 CTCCCCCTGTCCATTGAGTTT 59.644 52.381 0.00 0.00 0.00 2.66
5124 7866 1.559682 GGTCTCTTGTAATGCCCCTCA 59.440 52.381 0.00 0.00 0.00 3.86
5157 7902 3.432252 CCACACCGTGTACATTCTTCTTC 59.568 47.826 3.25 0.00 0.00 2.87
5169 7914 1.671742 GGACTCATCCACACCGTGT 59.328 57.895 0.00 0.00 45.47 4.49
5180 7925 5.219739 AGGTAACAGGTATCATGGACTCAT 58.780 41.667 0.00 0.00 41.41 2.90
5181 7926 4.620723 AGGTAACAGGTATCATGGACTCA 58.379 43.478 0.00 0.00 41.41 3.41
5184 7929 3.709653 TGGAGGTAACAGGTATCATGGAC 59.290 47.826 0.00 0.00 41.41 4.02
5185 7930 4.002256 TGGAGGTAACAGGTATCATGGA 57.998 45.455 0.00 0.00 41.41 3.41
5186 7931 4.164221 AGTTGGAGGTAACAGGTATCATGG 59.836 45.833 0.00 0.00 41.41 3.66
5466 8217 1.332997 GCTGGCATCTTTCCTTCATCG 59.667 52.381 0.00 0.00 0.00 3.84
5492 8243 4.262635 CCTGTGAACCTCTAAGCTTCTTGA 60.263 45.833 0.00 0.00 0.00 3.02
5856 8648 1.003442 CATGGAGGGTGGAGGGAGA 59.997 63.158 0.00 0.00 0.00 3.71
5857 8649 2.750657 GCATGGAGGGTGGAGGGAG 61.751 68.421 0.00 0.00 0.00 4.30
5858 8650 2.692368 GCATGGAGGGTGGAGGGA 60.692 66.667 0.00 0.00 0.00 4.20
5862 8654 1.538629 TCTGTGCATGGAGGGTGGA 60.539 57.895 0.00 0.00 0.00 4.02
5865 8657 1.426251 TTGGTCTGTGCATGGAGGGT 61.426 55.000 0.00 0.00 0.00 4.34
5866 8658 0.679002 CTTGGTCTGTGCATGGAGGG 60.679 60.000 0.00 0.00 0.00 4.30
5868 8660 1.310933 GCCTTGGTCTGTGCATGGAG 61.311 60.000 0.00 0.00 0.00 3.86
5870 8662 0.896940 AAGCCTTGGTCTGTGCATGG 60.897 55.000 0.00 0.00 0.00 3.66
5872 8664 2.584835 TTAAGCCTTGGTCTGTGCAT 57.415 45.000 0.00 0.00 0.00 3.96
5873 8665 2.356665 TTTAAGCCTTGGTCTGTGCA 57.643 45.000 0.00 0.00 0.00 4.57
5874 8666 2.672195 GCATTTAAGCCTTGGTCTGTGC 60.672 50.000 0.00 0.00 0.00 4.57
5887 8705 8.816640 AACAATGTGTCTAAAAGGCATTTAAG 57.183 30.769 0.00 0.00 29.73 1.85
5960 8949 6.358974 TCTCATCTTGACAAGTTGGTATCA 57.641 37.500 20.84 0.00 0.00 2.15
5961 8950 8.200792 AGTATCTCATCTTGACAAGTTGGTATC 58.799 37.037 20.84 11.21 0.00 2.24
5963 8952 7.482169 AGTATCTCATCTTGACAAGTTGGTA 57.518 36.000 20.84 12.52 0.00 3.25
5979 8968 4.537135 ACCTCGAGCAAAAAGTATCTCA 57.463 40.909 6.99 0.00 0.00 3.27
6018 9007 3.815401 AGAACACCAGACCAGAAAATTCG 59.185 43.478 0.00 0.00 0.00 3.34
6159 9150 7.171337 TCCAGCAGAAAATTACAATTCTTTTGC 59.829 33.333 12.14 12.14 33.73 3.68
6161 9152 9.783081 AATCCAGCAGAAAATTACAATTCTTTT 57.217 25.926 0.00 0.00 33.73 2.27
6173 9164 4.562143 GGTTTGAGCAATCCAGCAGAAAAT 60.562 41.667 5.64 0.00 36.85 1.82
6197 9350 6.928979 TCCTGAAAATACGAGAAAAACACA 57.071 33.333 0.00 0.00 0.00 3.72
6320 9473 3.832527 TGGAGAAGGTTTTGCTTTAGCT 58.167 40.909 3.10 0.00 42.66 3.32
6371 9524 2.652662 GTTCAGCGTCAGTGAACTTG 57.347 50.000 8.17 0.00 46.88 3.16
6584 9737 3.004734 TGCTTTTAGGTTCAGCAAGCTTC 59.995 43.478 0.00 0.00 40.61 3.86
6659 9812 2.744768 CGGCAAGCTTCTTCTCCGC 61.745 63.158 0.00 0.00 0.00 5.54
6890 10043 2.551032 CCTGGAAACTTTACCGTTGGAC 59.449 50.000 0.00 0.00 0.00 4.02
7147 10300 2.280628 CCTCGTAGGAATTCAACTGGC 58.719 52.381 7.93 0.00 37.67 4.85
7163 10316 8.818141 ATTAGTGTTGAATCATACATACCTCG 57.182 34.615 2.63 0.00 0.00 4.63
7209 10362 3.456380 ACCCCAAAGAACACAGCATAT 57.544 42.857 0.00 0.00 0.00 1.78
7210 10363 2.969821 ACCCCAAAGAACACAGCATA 57.030 45.000 0.00 0.00 0.00 3.14
7216 10369 5.528870 CAAAACAGATACCCCAAAGAACAC 58.471 41.667 0.00 0.00 0.00 3.32
7265 10418 5.722021 TTCCGCACATATAATCTGAGCTA 57.278 39.130 0.00 0.00 0.00 3.32
7271 10424 6.389830 TGCATTTTTCCGCACATATAATCT 57.610 33.333 0.00 0.00 31.95 2.40
7278 10431 1.733360 GCATTGCATTTTTCCGCACAT 59.267 42.857 3.15 0.00 38.00 3.21
7284 10437 4.571984 GTGGGAATAGCATTGCATTTTTCC 59.428 41.667 11.91 15.13 0.00 3.13
7286 10439 4.183101 CGTGGGAATAGCATTGCATTTTT 58.817 39.130 11.91 0.00 0.00 1.94
7298 10462 5.811399 TTGATTTAACAGCGTGGGAATAG 57.189 39.130 0.00 0.00 0.00 1.73
7303 10467 3.634568 TGTTTGATTTAACAGCGTGGG 57.365 42.857 0.00 0.00 33.31 4.61
7307 10471 5.827568 AAGCAATGTTTGATTTAACAGCG 57.172 34.783 0.00 0.00 40.99 5.18
7345 10509 8.750416 CAGTAATTCTCTTATCAATGTCGTCTG 58.250 37.037 0.00 0.00 0.00 3.51
7348 10512 7.268586 AGCAGTAATTCTCTTATCAATGTCGT 58.731 34.615 0.00 0.00 0.00 4.34
7709 10873 1.528586 GCATCGGAATCCATCGTTGAG 59.471 52.381 0.00 0.00 0.00 3.02
7774 10942 6.642540 CGCTTGCAATAGTGTATAATCTCAGA 59.357 38.462 0.00 0.00 0.00 3.27
7778 10946 5.611374 ACCGCTTGCAATAGTGTATAATCT 58.389 37.500 0.00 0.00 0.00 2.40
7824 10992 4.378770 CGAACCTGGATGAAACATGAAGTG 60.379 45.833 0.00 0.00 0.00 3.16
7825 10993 3.753272 CGAACCTGGATGAAACATGAAGT 59.247 43.478 0.00 0.00 0.00 3.01
7935 11238 6.002704 AGTTTCATCACTGAGCAATTCTCTT 58.997 36.000 6.50 0.00 42.38 2.85
7962 11621 6.063404 TGTTCGGGGACAAAACTAACTTATT 58.937 36.000 0.00 0.00 0.00 1.40
8005 11664 4.555262 TCTCATTTCATTTTCGCCCAAAC 58.445 39.130 0.00 0.00 0.00 2.93
8267 12874 2.685897 TGCTTACAAACAACACAGGACC 59.314 45.455 0.00 0.00 0.00 4.46
8270 12877 5.008613 ACATACTGCTTACAAACAACACAGG 59.991 40.000 0.00 0.00 0.00 4.00
8271 12878 5.909054 CACATACTGCTTACAAACAACACAG 59.091 40.000 0.00 0.00 0.00 3.66
8345 12957 5.060662 ACGATCCGATCCACAAGTATATG 57.939 43.478 2.69 0.00 0.00 1.78
8500 13159 3.791973 TGTTGCGGAGTTCAAAAATGT 57.208 38.095 0.00 0.00 0.00 2.71
8527 13186 1.687996 CCCTCCGCCCCATAATGTTTT 60.688 52.381 0.00 0.00 0.00 2.43
8529 13188 0.991355 TCCCTCCGCCCCATAATGTT 60.991 55.000 0.00 0.00 0.00 2.71
8530 13189 1.385347 TCCCTCCGCCCCATAATGT 60.385 57.895 0.00 0.00 0.00 2.71
8531 13190 1.376466 CTCCCTCCGCCCCATAATG 59.624 63.158 0.00 0.00 0.00 1.90
8532 13191 0.192566 TACTCCCTCCGCCCCATAAT 59.807 55.000 0.00 0.00 0.00 1.28
8533 13192 0.761702 GTACTCCCTCCGCCCCATAA 60.762 60.000 0.00 0.00 0.00 1.90
8534 13193 1.152398 GTACTCCCTCCGCCCCATA 60.152 63.158 0.00 0.00 0.00 2.74
8535 13194 2.446036 GTACTCCCTCCGCCCCAT 60.446 66.667 0.00 0.00 0.00 4.00
8536 13195 3.248248 AAGTACTCCCTCCGCCCCA 62.248 63.158 0.00 0.00 0.00 4.96
8537 13196 2.365237 AAGTACTCCCTCCGCCCC 60.365 66.667 0.00 0.00 0.00 5.80
8538 13197 2.901042 CAAGTACTCCCTCCGCCC 59.099 66.667 0.00 0.00 0.00 6.13
8539 13198 2.187163 GCAAGTACTCCCTCCGCC 59.813 66.667 0.00 0.00 0.00 6.13
8540 13199 2.202756 CGCAAGTACTCCCTCCGC 60.203 66.667 0.00 0.00 0.00 5.54
8541 13200 0.460311 ATTCGCAAGTACTCCCTCCG 59.540 55.000 0.00 0.00 39.48 4.63
8542 13201 2.036089 CCTATTCGCAAGTACTCCCTCC 59.964 54.545 0.00 0.00 39.48 4.30
8543 13202 2.957006 TCCTATTCGCAAGTACTCCCTC 59.043 50.000 0.00 0.00 39.48 4.30
8544 13203 3.028094 TCCTATTCGCAAGTACTCCCT 57.972 47.619 0.00 0.00 39.48 4.20
8545 13204 3.383825 TCTTCCTATTCGCAAGTACTCCC 59.616 47.826 0.00 0.00 39.48 4.30
8546 13205 4.612943 CTCTTCCTATTCGCAAGTACTCC 58.387 47.826 0.00 0.00 39.48 3.85
8547 13206 4.045783 GCTCTTCCTATTCGCAAGTACTC 58.954 47.826 0.00 0.00 39.48 2.59
8548 13207 3.447586 TGCTCTTCCTATTCGCAAGTACT 59.552 43.478 0.00 0.00 39.48 2.73
8584 13326 1.410004 TGTTGTCAGGACGTCCTCTT 58.590 50.000 34.28 12.04 46.65 2.85
8585 13327 1.273606 CATGTTGTCAGGACGTCCTCT 59.726 52.381 34.28 12.89 46.65 3.69
8586 13328 1.000955 ACATGTTGTCAGGACGTCCTC 59.999 52.381 34.28 23.70 46.65 3.71
8589 13331 6.588756 TCTTAATAACATGTTGTCAGGACGTC 59.411 38.462 21.42 7.13 0.00 4.34
8590 13332 6.460781 TCTTAATAACATGTTGTCAGGACGT 58.539 36.000 21.42 0.14 0.00 4.34
8591 13333 6.961359 TCTTAATAACATGTTGTCAGGACG 57.039 37.500 21.42 2.56 0.00 4.79
8592 13334 7.148255 TGCATCTTAATAACATGTTGTCAGGAC 60.148 37.037 21.42 7.89 0.00 3.85
8593 13335 6.883756 TGCATCTTAATAACATGTTGTCAGGA 59.116 34.615 21.42 7.06 0.00 3.86
8594 13336 7.087409 TGCATCTTAATAACATGTTGTCAGG 57.913 36.000 21.42 0.92 0.00 3.86
8595 13337 8.969121 TTTGCATCTTAATAACATGTTGTCAG 57.031 30.769 21.42 13.43 0.00 3.51
8780 13522 9.793252 CTGTTGCATATGCTTCTTTTTAGTTAT 57.207 29.630 27.13 0.00 42.66 1.89
8825 13567 7.781324 AAAATCACTTGATCTTTACATGGGT 57.219 32.000 0.00 0.00 32.75 4.51
8850 13593 1.006758 ACTAGATTGGACTCGGGACCA 59.993 52.381 1.11 1.11 35.65 4.02
8852 13595 3.194968 TGAAACTAGATTGGACTCGGGAC 59.805 47.826 0.00 0.00 0.00 4.46
8853 13596 3.437213 TGAAACTAGATTGGACTCGGGA 58.563 45.455 0.00 0.00 0.00 5.14
8854 13597 3.887621 TGAAACTAGATTGGACTCGGG 57.112 47.619 0.00 0.00 0.00 5.14
8899 13643 4.617253 TTACTGAGCATACCGCCAATAT 57.383 40.909 0.00 0.00 44.04 1.28
9070 13894 4.810790 ACTTACTGTCTTGAGGAATCACG 58.189 43.478 0.00 0.00 0.00 4.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.