Multiple sequence alignment - TraesCS5B01G560500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G560500 chr5B 100.000 4261 0 0 1 4261 707165794 707161534 0.000000e+00 7869.0
1 TraesCS5B01G560500 chr5B 92.019 639 35 9 1996 2623 507342398 507343031 0.000000e+00 883.0
2 TraesCS5B01G560500 chr5B 82.400 375 37 22 277 632 618467798 618468162 2.490000e-77 300.0
3 TraesCS5B01G560500 chr5B 81.481 378 37 19 277 632 491577890 491578256 3.240000e-71 279.0
4 TraesCS5B01G560500 chr5B 81.902 326 39 14 277 585 593555002 593555324 1.520000e-64 257.0
5 TraesCS5B01G560500 chr5D 87.445 2270 144 55 778 3001 565950574 565952748 0.000000e+00 2483.0
6 TraesCS5B01G560500 chr5D 91.928 830 41 8 3073 3895 565953173 565953983 0.000000e+00 1138.0
7 TraesCS5B01G560500 chr5D 81.944 432 39 19 277 677 341240342 341239919 3.180000e-86 329.0
8 TraesCS5B01G560500 chr5D 75.401 374 61 20 318 674 507838794 507838435 7.380000e-33 152.0
9 TraesCS5B01G560500 chr5D 100.000 28 0 0 741 768 565950556 565950583 8.000000e-03 52.8
10 TraesCS5B01G560500 chr4A 88.894 2008 132 39 820 2798 607432014 607433959 0.000000e+00 2388.0
11 TraesCS5B01G560500 chr4A 89.231 455 28 14 3072 3523 607434482 607434918 2.240000e-152 549.0
12 TraesCS5B01G560500 chr4A 93.664 363 19 3 3902 4261 589809369 589809730 1.350000e-149 540.0
13 TraesCS5B01G560500 chr4A 89.807 363 27 4 3905 4261 729697370 729697012 1.400000e-124 457.0
14 TraesCS5B01G560500 chr7B 92.019 639 33 10 1996 2623 616929557 616930188 0.000000e+00 881.0
15 TraesCS5B01G560500 chr7B 76.164 365 51 25 329 674 712723100 712723447 4.410000e-35 159.0
16 TraesCS5B01G560500 chr6B 94.235 451 21 5 2171 2620 204852552 204852998 0.000000e+00 684.0
17 TraesCS5B01G560500 chr6B 92.837 363 19 2 3905 4261 70676323 70675962 1.760000e-143 520.0
18 TraesCS5B01G560500 chr6B 92.265 362 21 2 3906 4261 70676885 70676525 1.370000e-139 507.0
19 TraesCS5B01G560500 chr6B 91.460 363 23 3 3905 4261 70675207 70674847 3.830000e-135 492.0
20 TraesCS5B01G560500 chr6B 93.598 328 14 2 3905 4226 70675760 70675434 2.300000e-132 483.0
21 TraesCS5B01G560500 chr6B 85.315 143 16 5 277 415 622647121 622646980 4.440000e-30 143.0
22 TraesCS5B01G560500 chr4B 94.712 208 9 2 3905 4112 599825854 599825649 5.320000e-84 322.0
23 TraesCS5B01G560500 chr4B 77.211 294 44 12 352 632 168565309 168565592 2.650000e-32 150.0
24 TraesCS5B01G560500 chr4D 81.647 425 42 19 277 674 334964319 334964734 1.910000e-83 320.0
25 TraesCS5B01G560500 chr7A 79.762 420 54 20 277 674 711242002 711241592 4.200000e-70 276.0
26 TraesCS5B01G560500 chr7A 77.095 358 53 18 294 632 18953782 18954129 3.390000e-41 180.0
27 TraesCS5B01G560500 chr2B 80.840 381 46 18 272 632 12602803 12603176 1.510000e-69 274.0
28 TraesCS5B01G560500 chr2B 81.609 174 25 3 461 632 98676536 98676368 2.070000e-28 137.0
29 TraesCS5B01G560500 chr3D 80.348 402 39 25 277 648 430130932 430130541 7.020000e-68 268.0
30 TraesCS5B01G560500 chr5A 76.611 419 71 19 276 678 51561298 51560891 5.580000e-49 206.0
31 TraesCS5B01G560500 chr5A 84.483 174 21 4 460 632 427583800 427583968 2.640000e-37 167.0
32 TraesCS5B01G560500 chr1B 79.730 296 40 13 350 632 583978844 583979132 3.360000e-46 196.0
33 TraesCS5B01G560500 chr6D 81.377 247 30 10 432 674 357174169 357174403 2.020000e-43 187.0
34 TraesCS5B01G560500 chr3B 95.652 46 1 1 3905 3950 781831366 781831410 5.910000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G560500 chr5B 707161534 707165794 4260 True 7869.0 7869 100.000000 1 4261 1 chr5B.!!$R1 4260
1 TraesCS5B01G560500 chr5B 507342398 507343031 633 False 883.0 883 92.019000 1996 2623 1 chr5B.!!$F2 627
2 TraesCS5B01G560500 chr5D 565950556 565953983 3427 False 1224.6 2483 93.124333 741 3895 3 chr5D.!!$F1 3154
3 TraesCS5B01G560500 chr4A 607432014 607434918 2904 False 1468.5 2388 89.062500 820 3523 2 chr4A.!!$F2 2703
4 TraesCS5B01G560500 chr7B 616929557 616930188 631 False 881.0 881 92.019000 1996 2623 1 chr7B.!!$F1 627
5 TraesCS5B01G560500 chr6B 70674847 70676885 2038 True 500.5 520 92.540000 3905 4261 4 chr6B.!!$R2 356

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
649 650 0.178947 TTTCAAAACCCGCCCTCCAT 60.179 50.0 0.00 0.00 0.00 3.41 F
768 769 0.256752 TCCATGTGCTTGGATCTGGG 59.743 55.0 3.08 0.00 40.90 4.45 F
771 772 0.395311 ATGTGCTTGGATCTGGGCAG 60.395 55.0 7.13 0.00 35.29 4.85 F
2706 2775 0.038067 TGCTGGTGATTGTGCATTGC 60.038 50.0 0.46 0.46 0.00 3.56 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1685 1722 0.319728 CAGTCCCTCCACTGACACTG 59.680 60.0 0.00 0.00 45.92 3.66 R
2706 2775 0.036388 TCTTACGCCTCCAGCCTTTG 60.036 55.0 0.00 0.00 38.78 2.77 R
2710 2779 0.249398 TTCTTCTTACGCCTCCAGCC 59.751 55.0 0.00 0.00 38.78 4.85 R
3818 4275 0.393537 ATTCCTCCTGCAGGCTTTCG 60.394 55.0 28.91 12.38 43.08 3.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.574891 TGTGCATAACTGTTTGTGTTTCT 57.425 34.783 0.00 0.00 0.00 2.52
23 24 6.685527 TGTGCATAACTGTTTGTGTTTCTA 57.314 33.333 0.00 0.00 0.00 2.10
24 25 7.270757 TGTGCATAACTGTTTGTGTTTCTAT 57.729 32.000 0.00 0.00 0.00 1.98
25 26 7.711846 TGTGCATAACTGTTTGTGTTTCTATT 58.288 30.769 0.00 0.00 0.00 1.73
26 27 8.194104 TGTGCATAACTGTTTGTGTTTCTATTT 58.806 29.630 0.00 0.00 0.00 1.40
27 28 9.672086 GTGCATAACTGTTTGTGTTTCTATTTA 57.328 29.630 0.00 0.00 0.00 1.40
28 29 9.891828 TGCATAACTGTTTGTGTTTCTATTTAG 57.108 29.630 0.00 0.00 0.00 1.85
29 30 8.850452 GCATAACTGTTTGTGTTTCTATTTAGC 58.150 33.333 0.00 0.00 0.00 3.09
30 31 9.891828 CATAACTGTTTGTGTTTCTATTTAGCA 57.108 29.630 0.00 0.00 0.00 3.49
33 34 8.396272 ACTGTTTGTGTTTCTATTTAGCATCT 57.604 30.769 0.00 0.00 0.00 2.90
34 35 8.850156 ACTGTTTGTGTTTCTATTTAGCATCTT 58.150 29.630 0.00 0.00 0.00 2.40
39 40 9.944376 TTGTGTTTCTATTTAGCATCTTACTCT 57.056 29.630 0.00 0.00 0.00 3.24
40 41 9.944376 TGTGTTTCTATTTAGCATCTTACTCTT 57.056 29.630 0.00 0.00 0.00 2.85
60 61 6.834959 TCTTGATAGAGAATGATTTGCGAC 57.165 37.500 0.00 0.00 0.00 5.19
61 62 6.577103 TCTTGATAGAGAATGATTTGCGACT 58.423 36.000 0.00 0.00 0.00 4.18
62 63 7.044181 TCTTGATAGAGAATGATTTGCGACTT 58.956 34.615 0.00 0.00 0.00 3.01
63 64 8.197439 TCTTGATAGAGAATGATTTGCGACTTA 58.803 33.333 0.00 0.00 0.00 2.24
64 65 8.893219 TTGATAGAGAATGATTTGCGACTTAT 57.107 30.769 0.00 0.00 0.00 1.73
65 66 8.526218 TGATAGAGAATGATTTGCGACTTATC 57.474 34.615 0.00 0.00 0.00 1.75
66 67 8.143835 TGATAGAGAATGATTTGCGACTTATCA 58.856 33.333 0.00 0.00 33.25 2.15
67 68 8.893219 ATAGAGAATGATTTGCGACTTATCAA 57.107 30.769 0.00 0.00 32.54 2.57
68 69 7.798596 AGAGAATGATTTGCGACTTATCAAT 57.201 32.000 0.00 0.00 32.54 2.57
69 70 7.637229 AGAGAATGATTTGCGACTTATCAATG 58.363 34.615 0.00 0.00 32.54 2.82
70 71 7.281774 AGAGAATGATTTGCGACTTATCAATGT 59.718 33.333 0.00 0.00 32.54 2.71
71 72 8.437360 AGAATGATTTGCGACTTATCAATGTA 57.563 30.769 0.00 0.00 32.54 2.29
72 73 8.892723 AGAATGATTTGCGACTTATCAATGTAA 58.107 29.630 0.00 0.00 32.54 2.41
73 74 8.841444 AATGATTTGCGACTTATCAATGTAAC 57.159 30.769 0.00 0.00 32.54 2.50
74 75 7.371126 TGATTTGCGACTTATCAATGTAACA 57.629 32.000 0.00 0.00 0.00 2.41
75 76 7.811653 TGATTTGCGACTTATCAATGTAACAA 58.188 30.769 0.00 0.00 0.00 2.83
76 77 8.293157 TGATTTGCGACTTATCAATGTAACAAA 58.707 29.630 0.00 0.00 0.00 2.83
77 78 9.289303 GATTTGCGACTTATCAATGTAACAAAT 57.711 29.630 0.00 0.00 35.94 2.32
80 81 9.929722 TTGCGACTTATCAATGTAACAAATATC 57.070 29.630 0.00 0.00 0.00 1.63
81 82 9.325198 TGCGACTTATCAATGTAACAAATATCT 57.675 29.630 0.00 0.00 0.00 1.98
189 190 8.877864 AAAAACACTCTAACATTATGGGATGA 57.122 30.769 0.00 0.00 0.00 2.92
190 191 8.877864 AAAACACTCTAACATTATGGGATGAA 57.122 30.769 0.00 0.00 0.00 2.57
191 192 8.511604 AAACACTCTAACATTATGGGATGAAG 57.488 34.615 0.00 0.00 0.00 3.02
192 193 6.595682 ACACTCTAACATTATGGGATGAAGG 58.404 40.000 0.00 0.00 0.00 3.46
193 194 6.000219 CACTCTAACATTATGGGATGAAGGG 59.000 44.000 0.00 0.00 0.00 3.95
194 195 5.911178 ACTCTAACATTATGGGATGAAGGGA 59.089 40.000 0.00 0.00 0.00 4.20
195 196 6.043706 ACTCTAACATTATGGGATGAAGGGAG 59.956 42.308 0.00 0.00 0.00 4.30
196 197 5.911178 TCTAACATTATGGGATGAAGGGAGT 59.089 40.000 0.00 0.00 0.00 3.85
197 198 7.079700 TCTAACATTATGGGATGAAGGGAGTA 58.920 38.462 0.00 0.00 0.00 2.59
198 199 5.832539 ACATTATGGGATGAAGGGAGTAG 57.167 43.478 0.00 0.00 0.00 2.57
199 200 5.476983 ACATTATGGGATGAAGGGAGTAGA 58.523 41.667 0.00 0.00 0.00 2.59
200 201 5.911178 ACATTATGGGATGAAGGGAGTAGAA 59.089 40.000 0.00 0.00 0.00 2.10
201 202 6.564152 ACATTATGGGATGAAGGGAGTAGAAT 59.436 38.462 0.00 0.00 0.00 2.40
202 203 7.739444 ACATTATGGGATGAAGGGAGTAGAATA 59.261 37.037 0.00 0.00 0.00 1.75
203 204 8.776119 CATTATGGGATGAAGGGAGTAGAATAT 58.224 37.037 0.00 0.00 0.00 1.28
204 205 8.757307 TTATGGGATGAAGGGAGTAGAATATT 57.243 34.615 0.00 0.00 0.00 1.28
205 206 6.688073 TGGGATGAAGGGAGTAGAATATTC 57.312 41.667 7.41 7.41 0.00 1.75
206 207 6.393897 TGGGATGAAGGGAGTAGAATATTCT 58.606 40.000 21.28 21.28 41.24 2.40
207 208 6.270927 TGGGATGAAGGGAGTAGAATATTCTG 59.729 42.308 25.22 0.00 38.19 3.02
208 209 6.271159 GGGATGAAGGGAGTAGAATATTCTGT 59.729 42.308 25.22 13.81 38.19 3.41
209 210 7.455008 GGGATGAAGGGAGTAGAATATTCTGTA 59.545 40.741 25.22 6.06 38.19 2.74
210 211 8.308207 GGATGAAGGGAGTAGAATATTCTGTAC 58.692 40.741 25.22 17.01 38.19 2.90
211 212 9.084533 GATGAAGGGAGTAGAATATTCTGTACT 57.915 37.037 25.22 20.95 38.19 2.73
212 213 8.239038 TGAAGGGAGTAGAATATTCTGTACTG 57.761 38.462 25.22 0.00 38.19 2.74
213 214 7.839705 TGAAGGGAGTAGAATATTCTGTACTGT 59.160 37.037 25.22 8.01 38.19 3.55
214 215 9.352191 GAAGGGAGTAGAATATTCTGTACTGTA 57.648 37.037 25.22 3.18 38.19 2.74
215 216 9.710818 AAGGGAGTAGAATATTCTGTACTGTAA 57.289 33.333 25.22 2.46 38.19 2.41
216 217 9.357161 AGGGAGTAGAATATTCTGTACTGTAAG 57.643 37.037 25.22 0.00 38.19 2.34
217 218 9.352191 GGGAGTAGAATATTCTGTACTGTAAGA 57.648 37.037 25.22 1.05 38.19 2.10
220 221 9.924010 AGTAGAATATTCTGTACTGTAAGAGGT 57.076 33.333 25.22 0.00 38.19 3.85
221 222 9.953697 GTAGAATATTCTGTACTGTAAGAGGTG 57.046 37.037 25.22 0.00 38.19 4.00
222 223 8.596781 AGAATATTCTGTACTGTAAGAGGTGT 57.403 34.615 17.26 0.00 34.62 4.16
223 224 8.688151 AGAATATTCTGTACTGTAAGAGGTGTC 58.312 37.037 17.26 0.00 34.62 3.67
224 225 7.956328 ATATTCTGTACTGTAAGAGGTGTCA 57.044 36.000 0.00 0.00 37.43 3.58
225 226 6.665992 ATTCTGTACTGTAAGAGGTGTCAA 57.334 37.500 0.00 0.00 37.43 3.18
226 227 5.449107 TCTGTACTGTAAGAGGTGTCAAC 57.551 43.478 0.00 0.00 37.43 3.18
227 228 4.891168 TCTGTACTGTAAGAGGTGTCAACA 59.109 41.667 0.00 0.00 37.43 3.33
228 229 4.940463 TGTACTGTAAGAGGTGTCAACAC 58.060 43.478 4.67 4.67 41.26 3.32
229 230 4.647853 TGTACTGTAAGAGGTGTCAACACT 59.352 41.667 12.65 0.00 41.54 3.55
230 231 5.829391 TGTACTGTAAGAGGTGTCAACACTA 59.171 40.000 12.65 0.00 41.54 2.74
231 232 5.864418 ACTGTAAGAGGTGTCAACACTAA 57.136 39.130 12.65 0.00 41.54 2.24
232 233 5.598769 ACTGTAAGAGGTGTCAACACTAAC 58.401 41.667 12.65 5.35 41.54 2.34
233 234 5.363005 ACTGTAAGAGGTGTCAACACTAACT 59.637 40.000 12.65 7.24 41.54 2.24
234 235 6.127140 ACTGTAAGAGGTGTCAACACTAACTT 60.127 38.462 12.65 15.26 41.54 2.66
235 236 6.046593 TGTAAGAGGTGTCAACACTAACTTG 58.953 40.000 12.65 0.00 45.73 3.16
236 237 4.755266 AGAGGTGTCAACACTAACTTGT 57.245 40.909 12.65 0.00 45.73 3.16
237 238 5.099042 AGAGGTGTCAACACTAACTTGTT 57.901 39.130 12.65 0.00 45.73 2.83
238 239 5.116882 AGAGGTGTCAACACTAACTTGTTC 58.883 41.667 12.65 0.00 45.73 3.18
239 240 4.196971 AGGTGTCAACACTAACTTGTTCC 58.803 43.478 12.65 0.00 45.73 3.62
240 241 3.314357 GGTGTCAACACTAACTTGTTCCC 59.686 47.826 12.65 0.00 45.73 3.97
241 242 3.001939 GTGTCAACACTAACTTGTTCCCG 59.998 47.826 6.03 0.00 43.25 5.14
242 243 2.546789 GTCAACACTAACTTGTTCCCGG 59.453 50.000 0.00 0.00 37.62 5.73
243 244 2.435069 TCAACACTAACTTGTTCCCGGA 59.565 45.455 0.73 0.00 37.62 5.14
244 245 2.538512 ACACTAACTTGTTCCCGGAC 57.461 50.000 0.73 0.00 0.00 4.79
245 246 2.044758 ACACTAACTTGTTCCCGGACT 58.955 47.619 0.73 0.00 0.00 3.85
246 247 2.036862 ACACTAACTTGTTCCCGGACTC 59.963 50.000 0.73 0.00 0.00 3.36
247 248 1.622312 ACTAACTTGTTCCCGGACTCC 59.378 52.381 0.73 0.00 0.00 3.85
248 249 0.978907 TAACTTGTTCCCGGACTCCC 59.021 55.000 0.73 0.00 0.00 4.30
249 250 1.775934 AACTTGTTCCCGGACTCCCC 61.776 60.000 0.73 0.00 0.00 4.81
250 251 2.122324 TTGTTCCCGGACTCCCCA 60.122 61.111 0.73 0.00 34.14 4.96
251 252 1.770927 TTGTTCCCGGACTCCCCAA 60.771 57.895 0.73 0.00 34.14 4.12
252 253 1.774894 TTGTTCCCGGACTCCCCAAG 61.775 60.000 0.73 0.00 34.14 3.61
253 254 1.916777 GTTCCCGGACTCCCCAAGA 60.917 63.158 0.73 0.00 34.14 3.02
268 269 7.617041 CTCCCCAAGAGTTAAGAATTTACAG 57.383 40.000 0.00 0.00 37.87 2.74
269 270 6.481643 TCCCCAAGAGTTAAGAATTTACAGG 58.518 40.000 0.00 0.00 0.00 4.00
270 271 6.045106 TCCCCAAGAGTTAAGAATTTACAGGT 59.955 38.462 0.00 0.00 0.00 4.00
271 272 7.238096 TCCCCAAGAGTTAAGAATTTACAGGTA 59.762 37.037 0.00 0.00 0.00 3.08
272 273 7.886446 CCCCAAGAGTTAAGAATTTACAGGTAA 59.114 37.037 0.00 0.00 0.00 2.85
273 274 9.292195 CCCAAGAGTTAAGAATTTACAGGTAAA 57.708 33.333 7.04 7.04 39.12 2.01
285 286 7.875327 ATTTACAGGTAAATTAGAACGGCAT 57.125 32.000 10.76 0.00 41.49 4.40
286 287 7.690952 TTTACAGGTAAATTAGAACGGCATT 57.309 32.000 0.65 0.00 30.78 3.56
287 288 7.690952 TTACAGGTAAATTAGAACGGCATTT 57.309 32.000 0.00 0.00 0.00 2.32
288 289 6.190954 ACAGGTAAATTAGAACGGCATTTC 57.809 37.500 0.00 0.00 0.00 2.17
289 290 5.163794 ACAGGTAAATTAGAACGGCATTTCG 60.164 40.000 0.00 0.00 0.00 3.46
290 291 4.334481 AGGTAAATTAGAACGGCATTTCGG 59.666 41.667 0.00 0.00 0.00 4.30
291 292 4.333372 GGTAAATTAGAACGGCATTTCGGA 59.667 41.667 0.00 0.00 0.00 4.55
292 293 4.616181 AAATTAGAACGGCATTTCGGAG 57.384 40.909 0.00 0.00 0.00 4.63
293 294 1.365699 TTAGAACGGCATTTCGGAGC 58.634 50.000 0.00 0.00 0.00 4.70
294 295 0.535335 TAGAACGGCATTTCGGAGCT 59.465 50.000 0.00 0.00 0.00 4.09
295 296 0.741221 AGAACGGCATTTCGGAGCTC 60.741 55.000 4.71 4.71 0.00 4.09
296 297 2.025359 GAACGGCATTTCGGAGCTCG 62.025 60.000 7.83 3.33 40.90 5.03
297 298 3.264897 CGGCATTTCGGAGCTCGG 61.265 66.667 14.80 14.80 39.77 4.63
298 299 3.577313 GGCATTTCGGAGCTCGGC 61.577 66.667 16.03 5.66 39.77 5.54
299 300 3.577313 GCATTTCGGAGCTCGGCC 61.577 66.667 16.03 0.00 39.77 6.13
300 301 2.187946 CATTTCGGAGCTCGGCCT 59.812 61.111 16.03 0.90 39.77 5.19
301 302 1.884926 CATTTCGGAGCTCGGCCTC 60.885 63.158 16.03 0.00 39.77 4.70
302 303 3.095347 ATTTCGGAGCTCGGCCTCC 62.095 63.158 16.03 11.00 46.42 4.30
321 322 3.996614 CGGAGGCCGGATGTTTTT 58.003 55.556 5.05 0.00 44.15 1.94
380 381 9.730420 AATCTGAAAACATTTGTACAAGTACAC 57.270 29.630 12.27 0.45 44.81 2.90
381 382 8.270080 TCTGAAAACATTTGTACAAGTACACA 57.730 30.769 12.27 7.08 44.81 3.72
382 383 8.731605 TCTGAAAACATTTGTACAAGTACACAA 58.268 29.630 12.27 10.30 44.81 3.33
383 384 8.903570 TGAAAACATTTGTACAAGTACACAAG 57.096 30.769 12.27 6.41 44.81 3.16
384 385 7.971168 TGAAAACATTTGTACAAGTACACAAGG 59.029 33.333 12.27 12.87 44.81 3.61
385 386 7.633193 AAACATTTGTACAAGTACACAAGGA 57.367 32.000 12.27 0.00 44.81 3.36
386 387 7.817418 AACATTTGTACAAGTACACAAGGAT 57.183 32.000 12.27 5.21 44.81 3.24
387 388 7.202016 ACATTTGTACAAGTACACAAGGATG 57.798 36.000 12.27 8.01 44.81 3.51
388 389 6.770785 ACATTTGTACAAGTACACAAGGATGT 59.229 34.615 12.27 8.61 44.81 3.06
401 402 4.910195 ACAAGGATGTGATGTGTATGTGT 58.090 39.130 0.00 0.00 38.69 3.72
402 403 4.696877 ACAAGGATGTGATGTGTATGTGTG 59.303 41.667 0.00 0.00 38.69 3.82
403 404 4.558226 AGGATGTGATGTGTATGTGTGT 57.442 40.909 0.00 0.00 0.00 3.72
404 405 5.675684 AGGATGTGATGTGTATGTGTGTA 57.324 39.130 0.00 0.00 0.00 2.90
405 406 6.048732 AGGATGTGATGTGTATGTGTGTAA 57.951 37.500 0.00 0.00 0.00 2.41
406 407 6.472016 AGGATGTGATGTGTATGTGTGTAAA 58.528 36.000 0.00 0.00 0.00 2.01
407 408 6.939730 AGGATGTGATGTGTATGTGTGTAAAA 59.060 34.615 0.00 0.00 0.00 1.52
408 409 7.611467 AGGATGTGATGTGTATGTGTGTAAAAT 59.389 33.333 0.00 0.00 0.00 1.82
409 410 8.243426 GGATGTGATGTGTATGTGTGTAAAATT 58.757 33.333 0.00 0.00 0.00 1.82
410 411 9.624697 GATGTGATGTGTATGTGTGTAAAATTT 57.375 29.630 0.00 0.00 0.00 1.82
411 412 9.624697 ATGTGATGTGTATGTGTGTAAAATTTC 57.375 29.630 0.00 0.00 0.00 2.17
412 413 8.624776 TGTGATGTGTATGTGTGTAAAATTTCA 58.375 29.630 0.00 0.00 0.00 2.69
413 414 9.117145 GTGATGTGTATGTGTGTAAAATTTCAG 57.883 33.333 0.00 0.00 0.00 3.02
414 415 9.061435 TGATGTGTATGTGTGTAAAATTTCAGA 57.939 29.630 0.00 0.00 0.00 3.27
464 465 9.617523 AAAAATTCAAGGACTTTTGTGATGAAT 57.382 25.926 0.00 0.00 37.26 2.57
466 467 9.918630 AAATTCAAGGACTTTTGTGATGAATAG 57.081 29.630 0.00 0.00 35.95 1.73
467 468 8.641498 ATTCAAGGACTTTTGTGATGAATAGT 57.359 30.769 0.00 0.00 35.59 2.12
468 469 9.739276 ATTCAAGGACTTTTGTGATGAATAGTA 57.261 29.630 0.00 0.00 35.59 1.82
469 470 9.739276 TTCAAGGACTTTTGTGATGAATAGTAT 57.261 29.630 0.00 0.00 0.00 2.12
470 471 9.383519 TCAAGGACTTTTGTGATGAATAGTATC 57.616 33.333 0.00 0.00 0.00 2.24
471 472 9.166173 CAAGGACTTTTGTGATGAATAGTATCA 57.834 33.333 0.00 0.00 32.44 2.15
472 473 9.911788 AAGGACTTTTGTGATGAATAGTATCAT 57.088 29.630 0.00 0.00 42.62 2.45
473 474 9.334947 AGGACTTTTGTGATGAATAGTATCATG 57.665 33.333 0.00 0.00 40.08 3.07
474 475 9.113838 GGACTTTTGTGATGAATAGTATCATGT 57.886 33.333 0.00 0.00 40.08 3.21
475 476 9.926751 GACTTTTGTGATGAATAGTATCATGTG 57.073 33.333 0.00 0.00 40.08 3.21
476 477 9.453572 ACTTTTGTGATGAATAGTATCATGTGT 57.546 29.630 0.00 0.00 40.08 3.72
479 480 9.447157 TTTGTGATGAATAGTATCATGTGTTGA 57.553 29.630 0.00 0.00 40.08 3.18
480 481 9.447157 TTGTGATGAATAGTATCATGTGTTGAA 57.553 29.630 0.00 0.00 40.08 2.69
481 482 9.447157 TGTGATGAATAGTATCATGTGTTGAAA 57.553 29.630 0.00 0.00 40.08 2.69
482 483 9.926751 GTGATGAATAGTATCATGTGTTGAAAG 57.073 33.333 0.00 0.00 40.08 2.62
483 484 9.112725 TGATGAATAGTATCATGTGTTGAAAGG 57.887 33.333 0.00 0.00 40.08 3.11
484 485 7.320443 TGAATAGTATCATGTGTTGAAAGGC 57.680 36.000 0.00 0.00 38.03 4.35
485 486 6.318648 TGAATAGTATCATGTGTTGAAAGGCC 59.681 38.462 0.00 0.00 38.03 5.19
486 487 4.032960 AGTATCATGTGTTGAAAGGCCA 57.967 40.909 5.01 0.00 38.03 5.36
487 488 3.758554 AGTATCATGTGTTGAAAGGCCAC 59.241 43.478 5.01 0.00 38.03 5.01
488 489 2.064434 TCATGTGTTGAAAGGCCACA 57.936 45.000 5.01 0.00 42.70 4.17
490 491 3.760738 TCATGTGTTGAAAGGCCACATA 58.239 40.909 5.01 0.00 45.41 2.29
491 492 4.343231 TCATGTGTTGAAAGGCCACATAT 58.657 39.130 5.01 0.36 45.41 1.78
492 493 4.771577 TCATGTGTTGAAAGGCCACATATT 59.228 37.500 5.01 0.00 45.41 1.28
493 494 5.245751 TCATGTGTTGAAAGGCCACATATTT 59.754 36.000 5.01 0.00 45.41 1.40
494 495 4.880759 TGTGTTGAAAGGCCACATATTTG 58.119 39.130 5.01 0.00 34.37 2.32
495 496 4.343526 TGTGTTGAAAGGCCACATATTTGT 59.656 37.500 5.01 0.00 34.37 2.83
496 497 4.923281 GTGTTGAAAGGCCACATATTTGTC 59.077 41.667 5.01 0.00 32.34 3.18
497 498 4.832266 TGTTGAAAGGCCACATATTTGTCT 59.168 37.500 5.01 0.00 32.34 3.41
498 499 5.304101 TGTTGAAAGGCCACATATTTGTCTT 59.696 36.000 5.01 0.00 32.34 3.01
499 500 5.643379 TGAAAGGCCACATATTTGTCTTC 57.357 39.130 5.01 0.00 32.34 2.87
500 501 5.324409 TGAAAGGCCACATATTTGTCTTCT 58.676 37.500 5.01 0.00 32.34 2.85
501 502 5.774690 TGAAAGGCCACATATTTGTCTTCTT 59.225 36.000 5.01 0.00 32.34 2.52
502 503 6.267471 TGAAAGGCCACATATTTGTCTTCTTT 59.733 34.615 5.01 6.84 32.34 2.52
503 504 5.649782 AGGCCACATATTTGTCTTCTTTG 57.350 39.130 5.01 0.00 32.34 2.77
504 505 4.082026 AGGCCACATATTTGTCTTCTTTGC 60.082 41.667 5.01 0.00 32.34 3.68
505 506 4.321899 GGCCACATATTTGTCTTCTTTGCA 60.322 41.667 0.00 0.00 32.34 4.08
506 507 4.622740 GCCACATATTTGTCTTCTTTGCAC 59.377 41.667 0.00 0.00 32.34 4.57
507 508 5.771469 CCACATATTTGTCTTCTTTGCACA 58.229 37.500 0.00 0.00 32.34 4.57
508 509 6.215121 CCACATATTTGTCTTCTTTGCACAA 58.785 36.000 0.00 0.00 32.34 3.33
509 510 6.144402 CCACATATTTGTCTTCTTTGCACAAC 59.856 38.462 0.00 0.00 32.34 3.32
510 511 6.144402 CACATATTTGTCTTCTTTGCACAACC 59.856 38.462 0.00 0.00 32.34 3.77
511 512 3.518634 TTTGTCTTCTTTGCACAACCC 57.481 42.857 0.00 0.00 29.74 4.11
512 513 2.435372 TGTCTTCTTTGCACAACCCT 57.565 45.000 0.00 0.00 0.00 4.34
513 514 2.297701 TGTCTTCTTTGCACAACCCTC 58.702 47.619 0.00 0.00 0.00 4.30
514 515 2.297701 GTCTTCTTTGCACAACCCTCA 58.702 47.619 0.00 0.00 0.00 3.86
515 516 2.887152 GTCTTCTTTGCACAACCCTCAT 59.113 45.455 0.00 0.00 0.00 2.90
516 517 3.319122 GTCTTCTTTGCACAACCCTCATT 59.681 43.478 0.00 0.00 0.00 2.57
517 518 3.960102 TCTTCTTTGCACAACCCTCATTT 59.040 39.130 0.00 0.00 0.00 2.32
518 519 4.037923 TCTTCTTTGCACAACCCTCATTTC 59.962 41.667 0.00 0.00 0.00 2.17
519 520 3.295093 TCTTTGCACAACCCTCATTTCA 58.705 40.909 0.00 0.00 0.00 2.69
520 521 3.703556 TCTTTGCACAACCCTCATTTCAA 59.296 39.130 0.00 0.00 0.00 2.69
521 522 3.451141 TTGCACAACCCTCATTTCAAC 57.549 42.857 0.00 0.00 0.00 3.18
522 523 2.382882 TGCACAACCCTCATTTCAACA 58.617 42.857 0.00 0.00 0.00 3.33
523 524 2.964464 TGCACAACCCTCATTTCAACAT 59.036 40.909 0.00 0.00 0.00 2.71
524 525 4.148079 TGCACAACCCTCATTTCAACATA 58.852 39.130 0.00 0.00 0.00 2.29
525 526 4.771577 TGCACAACCCTCATTTCAACATAT 59.228 37.500 0.00 0.00 0.00 1.78
526 527 5.245751 TGCACAACCCTCATTTCAACATATT 59.754 36.000 0.00 0.00 0.00 1.28
527 528 6.165577 GCACAACCCTCATTTCAACATATTT 58.834 36.000 0.00 0.00 0.00 1.40
528 529 6.311200 GCACAACCCTCATTTCAACATATTTC 59.689 38.462 0.00 0.00 0.00 2.17
529 530 6.527722 CACAACCCTCATTTCAACATATTTCG 59.472 38.462 0.00 0.00 0.00 3.46
530 531 6.208599 ACAACCCTCATTTCAACATATTTCGT 59.791 34.615 0.00 0.00 0.00 3.85
531 532 6.436843 ACCCTCATTTCAACATATTTCGTC 57.563 37.500 0.00 0.00 0.00 4.20
532 533 6.180472 ACCCTCATTTCAACATATTTCGTCT 58.820 36.000 0.00 0.00 0.00 4.18
533 534 6.659242 ACCCTCATTTCAACATATTTCGTCTT 59.341 34.615 0.00 0.00 0.00 3.01
534 535 6.968904 CCCTCATTTCAACATATTTCGTCTTG 59.031 38.462 0.00 0.00 0.00 3.02
535 536 7.148255 CCCTCATTTCAACATATTTCGTCTTGA 60.148 37.037 0.00 0.00 0.00 3.02
536 537 8.236586 CCTCATTTCAACATATTTCGTCTTGAA 58.763 33.333 0.00 0.00 33.85 2.69
546 547 2.765108 TCGTCTTGAAAATTTGCGCA 57.235 40.000 5.66 5.66 0.00 6.09
547 548 2.380660 TCGTCTTGAAAATTTGCGCAC 58.619 42.857 11.12 0.00 0.00 5.34
548 549 2.115595 CGTCTTGAAAATTTGCGCACA 58.884 42.857 11.12 3.02 0.00 4.57
549 550 2.725723 CGTCTTGAAAATTTGCGCACAT 59.274 40.909 11.12 6.34 0.00 3.21
550 551 3.420799 CGTCTTGAAAATTTGCGCACATG 60.421 43.478 11.12 6.28 0.00 3.21
551 552 3.490526 GTCTTGAAAATTTGCGCACATGT 59.509 39.130 11.12 0.00 0.00 3.21
552 553 3.490155 TCTTGAAAATTTGCGCACATGTG 59.510 39.130 21.83 21.83 0.00 3.21
553 554 2.819115 TGAAAATTTGCGCACATGTGT 58.181 38.095 26.01 3.55 0.00 3.72
567 568 5.225899 CACATGTGTGTTATGTCTCCATG 57.774 43.478 18.03 0.00 40.96 3.66
568 569 3.691118 ACATGTGTGTTATGTCTCCATGC 59.309 43.478 0.00 0.00 33.72 4.06
569 570 3.415457 TGTGTGTTATGTCTCCATGCA 57.585 42.857 0.00 0.00 32.29 3.96
570 571 3.954200 TGTGTGTTATGTCTCCATGCAT 58.046 40.909 0.00 0.00 32.29 3.96
571 572 3.690628 TGTGTGTTATGTCTCCATGCATG 59.309 43.478 20.19 20.19 32.29 4.06
572 573 3.691118 GTGTGTTATGTCTCCATGCATGT 59.309 43.478 24.58 8.14 32.29 3.21
573 574 3.940852 TGTGTTATGTCTCCATGCATGTC 59.059 43.478 24.58 12.44 32.29 3.06
574 575 4.194640 GTGTTATGTCTCCATGCATGTCT 58.805 43.478 24.58 5.69 32.29 3.41
575 576 4.637534 GTGTTATGTCTCCATGCATGTCTT 59.362 41.667 24.58 12.16 32.29 3.01
576 577 5.124457 GTGTTATGTCTCCATGCATGTCTTT 59.876 40.000 24.58 7.49 32.29 2.52
577 578 6.316140 GTGTTATGTCTCCATGCATGTCTTTA 59.684 38.462 24.58 9.01 32.29 1.85
578 579 7.012704 GTGTTATGTCTCCATGCATGTCTTTAT 59.987 37.037 24.58 14.93 32.29 1.40
579 580 7.557358 TGTTATGTCTCCATGCATGTCTTTATT 59.443 33.333 24.58 7.09 32.29 1.40
580 581 8.408601 GTTATGTCTCCATGCATGTCTTTATTT 58.591 33.333 24.58 5.85 32.29 1.40
581 582 6.839124 TGTCTCCATGCATGTCTTTATTTT 57.161 33.333 24.58 0.00 0.00 1.82
582 583 7.230849 TGTCTCCATGCATGTCTTTATTTTT 57.769 32.000 24.58 0.00 0.00 1.94
583 584 7.315142 TGTCTCCATGCATGTCTTTATTTTTC 58.685 34.615 24.58 4.03 0.00 2.29
584 585 7.039853 TGTCTCCATGCATGTCTTTATTTTTCA 60.040 33.333 24.58 6.24 0.00 2.69
585 586 7.977853 GTCTCCATGCATGTCTTTATTTTTCAT 59.022 33.333 24.58 0.00 0.00 2.57
586 587 8.533657 TCTCCATGCATGTCTTTATTTTTCATT 58.466 29.630 24.58 0.00 0.00 2.57
587 588 9.158233 CTCCATGCATGTCTTTATTTTTCATTT 57.842 29.630 24.58 0.00 0.00 2.32
588 589 9.504708 TCCATGCATGTCTTTATTTTTCATTTT 57.495 25.926 24.58 0.00 0.00 1.82
644 645 2.839975 TGAATTTTTCAAAACCCGCCC 58.160 42.857 0.00 0.00 36.59 6.13
645 646 2.436173 TGAATTTTTCAAAACCCGCCCT 59.564 40.909 0.00 0.00 36.59 5.19
646 647 2.831685 ATTTTTCAAAACCCGCCCTC 57.168 45.000 0.00 0.00 0.00 4.30
647 648 0.753867 TTTTTCAAAACCCGCCCTCC 59.246 50.000 0.00 0.00 0.00 4.30
648 649 0.397254 TTTTCAAAACCCGCCCTCCA 60.397 50.000 0.00 0.00 0.00 3.86
649 650 0.178947 TTTCAAAACCCGCCCTCCAT 60.179 50.000 0.00 0.00 0.00 3.41
650 651 0.897863 TTCAAAACCCGCCCTCCATG 60.898 55.000 0.00 0.00 0.00 3.66
651 652 2.037208 AAAACCCGCCCTCCATGG 59.963 61.111 4.97 4.97 0.00 3.66
652 653 2.543797 AAAACCCGCCCTCCATGGA 61.544 57.895 15.27 15.27 38.35 3.41
653 654 2.087857 AAAACCCGCCCTCCATGGAA 62.088 55.000 17.00 0.00 38.35 3.53
654 655 2.499303 AAACCCGCCCTCCATGGAAG 62.499 60.000 17.00 9.97 38.35 3.46
655 656 4.883354 CCCGCCCTCCATGGAAGC 62.883 72.222 21.44 21.44 38.35 3.86
656 657 4.883354 CCGCCCTCCATGGAAGCC 62.883 72.222 23.99 6.09 38.35 4.35
658 659 3.797353 GCCCTCCATGGAAGCCGA 61.797 66.667 20.95 0.00 38.35 5.54
659 660 2.507944 CCCTCCATGGAAGCCGAG 59.492 66.667 17.00 2.41 38.35 4.63
660 661 2.203126 CCTCCATGGAAGCCGAGC 60.203 66.667 17.00 0.00 38.35 5.03
661 662 2.739996 CCTCCATGGAAGCCGAGCT 61.740 63.158 17.00 0.00 42.56 4.09
662 663 1.227497 CTCCATGGAAGCCGAGCTC 60.227 63.158 17.00 2.73 38.25 4.09
663 664 2.203126 CCATGGAAGCCGAGCTCC 60.203 66.667 5.56 0.00 38.25 4.70
664 665 2.586245 CATGGAAGCCGAGCTCCA 59.414 61.111 8.47 14.41 38.25 3.86
665 666 1.078214 CATGGAAGCCGAGCTCCAA 60.078 57.895 8.47 0.00 38.25 3.53
666 667 0.677731 CATGGAAGCCGAGCTCCAAA 60.678 55.000 8.47 0.00 38.25 3.28
667 668 0.393537 ATGGAAGCCGAGCTCCAAAG 60.394 55.000 8.47 0.00 38.25 2.77
680 681 3.764885 CTCCAAAGCAATTTACGGAGG 57.235 47.619 0.00 0.00 36.01 4.30
681 682 3.081804 CTCCAAAGCAATTTACGGAGGT 58.918 45.455 0.00 0.00 36.01 3.85
682 683 4.258543 CTCCAAAGCAATTTACGGAGGTA 58.741 43.478 0.00 0.00 36.01 3.08
683 684 4.653868 TCCAAAGCAATTTACGGAGGTAA 58.346 39.130 0.00 0.00 36.86 2.85
685 686 9.444332 GCTCCAAAGCAATTTACGGAGGTAAAT 62.444 40.741 0.00 6.43 46.88 1.40
698 699 9.558396 TTACGGAGGTAAATGTCTTTTAAAAGA 57.442 29.630 23.65 23.65 37.87 2.52
699 700 8.631480 ACGGAGGTAAATGTCTTTTAAAAGAT 57.369 30.769 28.46 17.41 45.83 2.40
700 701 8.727910 ACGGAGGTAAATGTCTTTTAAAAGATC 58.272 33.333 28.46 21.88 45.83 2.75
701 702 8.947115 CGGAGGTAAATGTCTTTTAAAAGATCT 58.053 33.333 28.46 17.94 45.83 2.75
719 720 7.830099 AAGATCTTTTCAAGAGGAACAATGT 57.170 32.000 0.88 0.00 41.61 2.71
720 721 7.446001 AGATCTTTTCAAGAGGAACAATGTC 57.554 36.000 0.00 0.00 41.61 3.06
721 722 6.432472 AGATCTTTTCAAGAGGAACAATGTCC 59.568 38.462 0.00 0.00 41.61 4.02
767 768 3.888424 TCCATGTGCTTGGATCTGG 57.112 52.632 3.08 0.00 40.90 3.86
768 769 0.256752 TCCATGTGCTTGGATCTGGG 59.743 55.000 3.08 0.00 40.90 4.45
769 770 1.389609 CCATGTGCTTGGATCTGGGC 61.390 60.000 0.00 0.00 39.25 5.36
770 771 0.681887 CATGTGCTTGGATCTGGGCA 60.682 55.000 0.00 0.00 0.00 5.36
771 772 0.395311 ATGTGCTTGGATCTGGGCAG 60.395 55.000 7.13 0.00 35.29 4.85
772 773 1.751927 GTGCTTGGATCTGGGCAGG 60.752 63.158 7.13 0.00 35.29 4.85
773 774 2.233566 TGCTTGGATCTGGGCAGGT 61.234 57.895 0.00 0.00 0.00 4.00
774 775 1.452833 GCTTGGATCTGGGCAGGTC 60.453 63.158 0.00 0.00 37.83 3.85
779 780 3.106738 GATCTGGGCAGGTCCATTG 57.893 57.895 0.00 0.00 36.05 2.82
780 781 0.466922 GATCTGGGCAGGTCCATTGG 60.467 60.000 0.00 0.00 36.05 3.16
781 782 0.920763 ATCTGGGCAGGTCCATTGGA 60.921 55.000 0.00 0.00 36.05 3.53
782 783 0.920763 TCTGGGCAGGTCCATTGGAT 60.921 55.000 9.01 0.00 36.05 3.41
783 784 0.466922 CTGGGCAGGTCCATTGGATC 60.467 60.000 9.01 8.48 36.05 3.36
784 785 0.920763 TGGGCAGGTCCATTGGATCT 60.921 55.000 12.97 12.97 45.22 2.75
816 825 2.453983 GGAGATCATCCTACAGCTGC 57.546 55.000 15.27 0.00 45.64 5.25
817 826 1.690893 GGAGATCATCCTACAGCTGCA 59.309 52.381 15.27 0.00 45.64 4.41
818 827 2.302445 GGAGATCATCCTACAGCTGCAT 59.698 50.000 15.27 0.00 45.64 3.96
883 892 2.595463 TTGACTCCGGTCCGACGT 60.595 61.111 14.39 9.08 41.47 4.34
1005 1015 2.125552 TCCGCGACCAAGATGCTG 60.126 61.111 8.23 0.00 0.00 4.41
1409 1419 2.753043 GGGGTCGGAGCTGTACGA 60.753 66.667 7.19 0.00 36.68 3.43
1617 1630 0.668706 GTCCGCCATCTCGATCCATG 60.669 60.000 0.00 0.00 0.00 3.66
1627 1652 2.149578 CTCGATCCATGGCTTCATTCC 58.850 52.381 6.96 0.00 0.00 3.01
1672 1709 6.927936 GCTAGATCTGCATGATTTACTTGAGA 59.072 38.462 5.18 0.00 35.14 3.27
1685 1722 7.442364 TGATTTACTTGAGATCGAATGATTCCC 59.558 37.037 0.00 0.00 34.09 3.97
1750 1787 2.275380 GGGCATGGTTGGTGGTGAC 61.275 63.158 0.00 0.00 0.00 3.67
1759 1797 1.954382 GTTGGTGGTGACCTTCCTTTC 59.046 52.381 14.96 4.93 43.58 2.62
1760 1798 0.476771 TGGTGGTGACCTTCCTTTCC 59.523 55.000 14.96 3.08 43.58 3.13
1761 1799 0.476771 GGTGGTGACCTTCCTTTCCA 59.523 55.000 2.11 0.00 39.47 3.53
1762 1800 1.075536 GGTGGTGACCTTCCTTTCCAT 59.924 52.381 2.11 0.00 39.47 3.41
1763 1801 2.162681 GTGGTGACCTTCCTTTCCATG 58.837 52.381 2.11 0.00 0.00 3.66
1764 1802 2.061848 TGGTGACCTTCCTTTCCATGA 58.938 47.619 2.11 0.00 0.00 3.07
1817 1855 2.616634 TTTGTTAGTGGGCGTACACA 57.383 45.000 12.83 0.00 43.72 3.72
1818 1856 1.868469 TTGTTAGTGGGCGTACACAC 58.132 50.000 12.83 1.15 43.72 3.82
1819 1857 0.751452 TGTTAGTGGGCGTACACACA 59.249 50.000 12.83 0.00 43.72 3.72
1820 1858 1.269883 TGTTAGTGGGCGTACACACAG 60.270 52.381 12.83 0.00 43.72 3.66
1821 1859 1.000060 GTTAGTGGGCGTACACACAGA 60.000 52.381 12.83 0.86 43.72 3.41
1822 1860 0.885879 TAGTGGGCGTACACACAGAG 59.114 55.000 12.83 0.00 43.72 3.35
1823 1861 0.826256 AGTGGGCGTACACACAGAGA 60.826 55.000 12.83 0.00 43.72 3.10
1824 1862 0.666577 GTGGGCGTACACACAGAGAC 60.667 60.000 6.73 0.00 40.99 3.36
1874 1912 5.163652 GCCTAACATTCATTTGGGTAGACAC 60.164 44.000 0.00 0.00 0.00 3.67
1882 1920 3.695830 TTTGGGTAGACACAGGACATC 57.304 47.619 0.00 0.00 0.00 3.06
1904 1942 2.105006 ACAGCTGAAGCCACACTATG 57.895 50.000 23.35 0.00 43.38 2.23
1991 2039 8.040132 TGTTTGTCAAAGAATTGGACAAATCTT 58.960 29.630 21.77 9.04 42.08 2.40
2003 2051 5.690865 TGGACAAATCTTGTTAAGTCCTGT 58.309 37.500 10.36 0.00 45.52 4.00
2043 2091 1.826720 GCTTGCATCTCCCAAATTGGA 59.173 47.619 14.62 0.00 40.96 3.53
2046 2094 4.282703 GCTTGCATCTCCCAAATTGGATAT 59.717 41.667 14.62 0.79 40.96 1.63
2125 2173 9.220767 AGTATCTAAATTTGGAACACTGTCTTC 57.779 33.333 16.43 0.00 39.29 2.87
2161 2217 7.099266 ACAGCAATTAAATGTAGCTATGCAA 57.901 32.000 12.73 0.00 35.11 4.08
2164 2220 8.323140 CAGCAATTAAATGTAGCTATGCAAAAC 58.677 33.333 12.73 0.00 35.11 2.43
2189 2247 6.164176 GCACAACTAGTTATGGACAGTAGTT 58.836 40.000 15.41 0.00 32.47 2.24
2205 2263 7.169982 GGACAGTAGTTATGTTGATATGCTCAC 59.830 40.741 0.00 0.00 32.17 3.51
2218 2284 8.924691 GTTGATATGCTCACTTCTCATAGATTC 58.075 37.037 0.00 0.00 32.17 2.52
2330 2396 1.792006 GGAACGTGAGGTTTGTCGAT 58.208 50.000 0.00 0.00 39.50 3.59
2468 2534 1.007479 TCCCGGTAGCTCTAAAGGGAA 59.993 52.381 14.43 3.65 38.93 3.97
2469 2535 1.835531 CCCGGTAGCTCTAAAGGGAAA 59.164 52.381 0.00 0.00 36.63 3.13
2527 2594 1.294659 CTGAACTCTTCGCTGGCACC 61.295 60.000 0.00 0.00 0.00 5.01
2543 2610 5.146010 TGGCACCACCATTCTTAAAATTC 57.854 39.130 0.00 0.00 46.36 2.17
2544 2611 4.590647 TGGCACCACCATTCTTAAAATTCA 59.409 37.500 0.00 0.00 46.36 2.57
2626 2694 1.911766 TGGAGAACCACCGGAGTCC 60.912 63.158 9.46 3.52 41.77 3.85
2634 2702 1.374758 CACCGGAGTCCTGCAGTTC 60.375 63.158 9.46 7.24 0.00 3.01
2706 2775 0.038067 TGCTGGTGATTGTGCATTGC 60.038 50.000 0.46 0.46 0.00 3.56
2709 2778 2.756829 CTGGTGATTGTGCATTGCAAA 58.243 42.857 13.94 4.85 41.47 3.68
2710 2779 2.734606 CTGGTGATTGTGCATTGCAAAG 59.265 45.455 13.94 0.00 41.47 2.77
2711 2780 2.070783 GGTGATTGTGCATTGCAAAGG 58.929 47.619 13.94 0.00 41.47 3.11
2720 2789 2.345760 ATTGCAAAGGCTGGAGGCG 61.346 57.895 1.71 0.00 46.23 5.52
2734 2803 4.082733 GCTGGAGGCGTAAGAAGAAAAATT 60.083 41.667 0.00 0.00 43.02 1.82
2773 2842 4.631377 TGGAACTGAATTTGAGATAGTGCG 59.369 41.667 0.00 0.00 0.00 5.34
2778 2847 4.105486 TGAATTTGAGATAGTGCGTCGAG 58.895 43.478 0.00 0.00 0.00 4.04
2789 2858 2.476619 AGTGCGTCGAGAAAATTCAGTG 59.523 45.455 0.00 0.00 0.00 3.66
2790 2859 1.194547 TGCGTCGAGAAAATTCAGTGC 59.805 47.619 0.00 0.61 0.00 4.40
2791 2860 1.783416 GCGTCGAGAAAATTCAGTGCG 60.783 52.381 0.00 0.00 0.00 5.34
2793 2862 1.194547 GTCGAGAAAATTCAGTGCGCA 59.805 47.619 5.66 5.66 0.00 6.09
2794 2863 2.076100 TCGAGAAAATTCAGTGCGCAT 58.924 42.857 15.91 0.00 0.00 4.73
2795 2864 2.159667 TCGAGAAAATTCAGTGCGCATG 60.160 45.455 15.91 13.39 0.00 4.06
2796 2865 2.159667 CGAGAAAATTCAGTGCGCATGA 60.160 45.455 15.91 15.66 0.00 3.07
2798 2867 3.568538 AGAAAATTCAGTGCGCATGAAC 58.431 40.909 26.44 17.98 39.36 3.18
2803 2872 0.670239 TCAGTGCGCATGAACGATGT 60.670 50.000 15.91 0.00 34.14 3.06
2807 2876 3.005898 CGCATGAACGATGTCCCG 58.994 61.111 0.00 0.00 34.14 5.14
2819 2888 2.124736 GTCCCGCCATTAGCTGCA 60.125 61.111 1.02 0.00 40.39 4.41
2820 2889 2.182842 GTCCCGCCATTAGCTGCAG 61.183 63.158 10.11 10.11 40.39 4.41
2821 2890 3.589881 CCCGCCATTAGCTGCAGC 61.590 66.667 31.53 31.53 40.39 5.25
2823 2892 2.713770 CGCCATTAGCTGCAGCAG 59.286 61.111 38.24 23.95 45.16 4.24
2825 2894 1.651240 CGCCATTAGCTGCAGCAGTT 61.651 55.000 38.24 21.89 45.16 3.16
2826 2895 0.179145 GCCATTAGCTGCAGCAGTTG 60.179 55.000 38.24 28.54 45.16 3.16
2827 2896 0.454600 CCATTAGCTGCAGCAGTTGG 59.545 55.000 38.24 32.41 45.16 3.77
2828 2897 1.456296 CATTAGCTGCAGCAGTTGGA 58.544 50.000 38.24 17.94 45.16 3.53
2829 2898 1.814394 CATTAGCTGCAGCAGTTGGAA 59.186 47.619 38.24 21.47 45.16 3.53
2831 2900 1.238439 TAGCTGCAGCAGTTGGAAAC 58.762 50.000 38.24 7.01 45.16 2.78
2842 2911 1.092348 GTTGGAAACGCCTGGTATCC 58.908 55.000 0.00 0.00 36.92 2.59
2843 2912 0.693622 TTGGAAACGCCTGGTATCCA 59.306 50.000 7.50 7.50 38.36 3.41
2844 2913 0.693622 TGGAAACGCCTGGTATCCAA 59.306 50.000 8.70 0.00 37.24 3.53
2845 2914 1.092348 GGAAACGCCTGGTATCCAAC 58.908 55.000 0.00 0.00 30.80 3.77
2846 2915 1.339727 GGAAACGCCTGGTATCCAACT 60.340 52.381 0.00 0.00 30.80 3.16
2847 2916 2.093341 GGAAACGCCTGGTATCCAACTA 60.093 50.000 0.00 0.00 30.80 2.24
2848 2917 2.981859 AACGCCTGGTATCCAACTAG 57.018 50.000 0.00 0.00 36.48 2.57
2849 2918 2.154567 ACGCCTGGTATCCAACTAGA 57.845 50.000 0.00 0.00 38.95 2.43
2850 2919 2.463752 ACGCCTGGTATCCAACTAGAA 58.536 47.619 0.00 0.00 38.95 2.10
2851 2920 2.167900 ACGCCTGGTATCCAACTAGAAC 59.832 50.000 0.00 0.00 38.95 3.01
2852 2921 2.431057 CGCCTGGTATCCAACTAGAACT 59.569 50.000 0.00 0.00 38.95 3.01
2853 2922 3.635373 CGCCTGGTATCCAACTAGAACTA 59.365 47.826 0.00 0.00 38.95 2.24
2854 2923 4.281182 CGCCTGGTATCCAACTAGAACTAT 59.719 45.833 0.00 0.00 38.95 2.12
2855 2924 5.542779 GCCTGGTATCCAACTAGAACTATG 58.457 45.833 0.00 0.00 38.95 2.23
2856 2925 5.070580 GCCTGGTATCCAACTAGAACTATGT 59.929 44.000 0.00 0.00 38.95 2.29
2857 2926 6.739008 GCCTGGTATCCAACTAGAACTATGTC 60.739 46.154 0.00 0.00 38.95 3.06
2858 2927 6.323996 CCTGGTATCCAACTAGAACTATGTCA 59.676 42.308 0.00 0.00 38.95 3.58
2868 2937 9.102757 CAACTAGAACTATGTCAAAGTGCATAT 57.897 33.333 0.00 0.00 0.00 1.78
2886 2955 7.070322 AGTGCATATTTAAAGGAAGCCAATCAT 59.930 33.333 0.00 0.00 0.00 2.45
2888 2958 9.092338 TGCATATTTAAAGGAAGCCAATCATAT 57.908 29.630 0.00 0.00 0.00 1.78
2894 2964 8.765488 TTAAAGGAAGCCAATCATATCATCAA 57.235 30.769 0.00 0.00 0.00 2.57
2897 2967 7.286215 AGGAAGCCAATCATATCATCAAAAG 57.714 36.000 0.00 0.00 0.00 2.27
2977 3055 3.579709 GAGCTCGTGTTTCATTGAGAGA 58.420 45.455 0.00 0.00 0.00 3.10
2989 3067 9.730705 TGTTTCATTGAGAGACATTCTTTAGAT 57.269 29.630 0.00 0.00 36.53 1.98
3046 3124 5.711976 ACAGAACAAGCTTTGGCATAGTAAT 59.288 36.000 0.00 0.00 41.70 1.89
3047 3125 6.884295 ACAGAACAAGCTTTGGCATAGTAATA 59.116 34.615 0.00 0.00 41.70 0.98
3050 3128 9.627123 AGAACAAGCTTTGGCATAGTAATATTA 57.373 29.630 0.00 0.00 41.70 0.98
3076 3525 7.891561 CCAATACTGGGAAGAAACAATTACAA 58.108 34.615 0.00 0.00 39.30 2.41
3119 3568 9.110617 CAGTTCAAATAGCAGCATATTTATTCG 57.889 33.333 0.00 0.00 34.38 3.34
3202 3651 2.472695 TGGTGGCTGCAAGTTACTAG 57.527 50.000 0.50 0.00 35.30 2.57
3251 3700 2.171448 GAGGGAGCCATACACATCTGTT 59.829 50.000 0.00 0.00 0.00 3.16
3292 3741 4.068599 CAGAGGAGGTTGGAAGAAGAAAC 58.931 47.826 0.00 0.00 0.00 2.78
3476 3932 2.679355 TGCACATTTTCGTTTCTCCG 57.321 45.000 0.00 0.00 0.00 4.63
3535 3991 3.929610 GCAAAGTCAGTACAGAGATCACC 59.070 47.826 0.00 0.00 0.00 4.02
3538 3994 1.405821 GTCAGTACAGAGATCACCCGG 59.594 57.143 0.00 0.00 0.00 5.73
3541 3997 3.021695 CAGTACAGAGATCACCCGGTTA 58.978 50.000 0.00 0.00 0.00 2.85
3544 4000 1.203994 ACAGAGATCACCCGGTTAACG 59.796 52.381 0.00 0.00 43.80 3.18
3562 4018 3.354089 ACGTCTTTTGGCATGAGTTTG 57.646 42.857 0.00 0.00 0.00 2.93
3563 4019 2.687935 ACGTCTTTTGGCATGAGTTTGT 59.312 40.909 0.00 0.00 0.00 2.83
3585 4041 4.645863 TTCAGCCTGGTGATGCATATAT 57.354 40.909 0.00 0.00 0.00 0.86
3586 4042 5.760484 TTCAGCCTGGTGATGCATATATA 57.240 39.130 0.00 0.00 0.00 0.86
3624 4080 0.727398 GGCTTGATCCGTGTGCTTAC 59.273 55.000 0.00 0.00 0.00 2.34
3638 4095 4.616802 GTGTGCTTACGATGGATGTTTTTG 59.383 41.667 0.00 0.00 0.00 2.44
3641 4098 5.689961 GTGCTTACGATGGATGTTTTTGTTT 59.310 36.000 0.00 0.00 0.00 2.83
3650 4107 7.649306 CGATGGATGTTTTTGTTTCTTCTTCTT 59.351 33.333 0.00 0.00 0.00 2.52
3657 4114 2.838736 TGTTTCTTCTTCTTGCGAGCT 58.161 42.857 0.00 0.00 0.00 4.09
3659 4116 1.151668 TTCTTCTTCTTGCGAGCTGC 58.848 50.000 0.00 0.00 46.70 5.25
3705 4162 0.033781 GCTGCATTGGCTTTGGTTCA 59.966 50.000 0.00 0.00 41.91 3.18
3727 4184 7.116075 TCATGATGACTGATGAGTATGTTGA 57.884 36.000 0.00 0.00 30.16 3.18
3728 4185 7.558604 TCATGATGACTGATGAGTATGTTGAA 58.441 34.615 0.00 0.00 30.16 2.69
3745 4202 0.890996 GAACCAGTGAAGCACCCCTG 60.891 60.000 0.00 0.00 34.49 4.45
3766 4223 3.907474 TGGAGTTCCTTCTGTTCATGGTA 59.093 43.478 0.00 0.00 36.82 3.25
3800 4257 2.061028 CTCGTGGCCATTTTGCTTTTC 58.939 47.619 9.72 0.00 0.00 2.29
3806 4263 3.259374 TGGCCATTTTGCTTTTCGGAATA 59.741 39.130 0.00 0.00 0.00 1.75
3811 4268 6.742264 GCCATTTTGCTTTTCGGAATAATTTG 59.258 34.615 0.00 0.00 0.00 2.32
3818 4275 5.724769 GCTTTTCGGAATAATTTGTGCATGC 60.725 40.000 11.82 11.82 0.00 4.06
3835 4292 2.665000 CGAAAGCCTGCAGGAGGA 59.335 61.111 37.21 0.00 46.33 3.71
3896 4353 8.649973 GACTGAAGTCGTTATCCAATAATCTT 57.350 34.615 0.00 0.00 35.12 2.40
3897 4354 9.745880 GACTGAAGTCGTTATCCAATAATCTTA 57.254 33.333 0.00 0.00 35.12 2.10
3903 4360 9.530633 AGTCGTTATCCAATAATCTTAAGTCAC 57.469 33.333 1.63 0.00 0.00 3.67
3904 4361 8.762426 GTCGTTATCCAATAATCTTAAGTCACC 58.238 37.037 1.63 0.00 0.00 4.02
3905 4362 8.701895 TCGTTATCCAATAATCTTAAGTCACCT 58.298 33.333 1.63 0.00 0.00 4.00
3906 4363 9.326413 CGTTATCCAATAATCTTAAGTCACCTT 57.674 33.333 1.63 0.00 34.56 3.50
3984 4441 4.213270 CCACGTCACTACAAATGTGTTCAT 59.787 41.667 0.00 0.00 39.30 2.57
4023 4480 1.070445 GTGGCTAGATCTGCAGCTCAT 59.930 52.381 19.13 3.08 37.91 2.90
4033 4490 0.321919 TGCAGCTCATGAGTTGACCC 60.322 55.000 35.31 21.46 41.41 4.46
4106 4563 1.989430 AAAAACGCACACCAACACAG 58.011 45.000 0.00 0.00 0.00 3.66
4108 4565 1.590610 AAACGCACACCAACACAGCA 61.591 50.000 0.00 0.00 0.00 4.41
4112 4569 0.318107 GCACACCAACACAGCATGAC 60.318 55.000 0.00 0.00 39.69 3.06
4131 4588 2.742372 CGCCTTCCCGTTCCACTG 60.742 66.667 0.00 0.00 0.00 3.66
4147 5173 3.846588 TCCACTGCTCCTCCTTTAATTCT 59.153 43.478 0.00 0.00 0.00 2.40
4180 5206 2.184579 CCCCGCTCCGTCTTCTTC 59.815 66.667 0.00 0.00 0.00 2.87
4185 5211 1.678269 CGCTCCGTCTTCTTCGCTTG 61.678 60.000 0.00 0.00 0.00 4.01
4210 5236 0.674581 CAAATCTGCCTCCACTGCGA 60.675 55.000 0.00 0.00 0.00 5.10
4214 5240 2.917227 TGCCTCCACTGCGAGACA 60.917 61.111 0.00 0.00 30.97 3.41
4232 5258 3.073735 CCTCCTCCAGTGCTCGCT 61.074 66.667 0.00 0.00 0.00 4.93
4239 5265 1.153745 CCAGTGCTCGCTAGTCCAC 60.154 63.158 0.00 0.00 0.00 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 8.574196 AAATAGAAACACAAACAGTTATGCAC 57.426 30.769 0.00 0.00 0.00 4.57
2 3 9.891828 CTAAATAGAAACACAAACAGTTATGCA 57.108 29.630 0.00 0.00 0.00 3.96
3 4 8.850452 GCTAAATAGAAACACAAACAGTTATGC 58.150 33.333 0.00 0.00 0.00 3.14
4 5 9.891828 TGCTAAATAGAAACACAAACAGTTATG 57.108 29.630 0.00 0.00 0.00 1.90
7 8 8.850156 AGATGCTAAATAGAAACACAAACAGTT 58.150 29.630 0.00 0.00 0.00 3.16
8 9 8.396272 AGATGCTAAATAGAAACACAAACAGT 57.604 30.769 0.00 0.00 0.00 3.55
13 14 9.944376 AGAGTAAGATGCTAAATAGAAACACAA 57.056 29.630 0.00 0.00 0.00 3.33
14 15 9.944376 AAGAGTAAGATGCTAAATAGAAACACA 57.056 29.630 0.00 0.00 0.00 3.72
37 38 6.577103 AGTCGCAAATCATTCTCTATCAAGA 58.423 36.000 0.00 0.00 0.00 3.02
38 39 6.841443 AGTCGCAAATCATTCTCTATCAAG 57.159 37.500 0.00 0.00 0.00 3.02
39 40 8.893219 ATAAGTCGCAAATCATTCTCTATCAA 57.107 30.769 0.00 0.00 0.00 2.57
40 41 8.143835 TGATAAGTCGCAAATCATTCTCTATCA 58.856 33.333 0.00 0.00 0.00 2.15
41 42 8.526218 TGATAAGTCGCAAATCATTCTCTATC 57.474 34.615 0.00 0.00 0.00 2.08
42 43 8.893219 TTGATAAGTCGCAAATCATTCTCTAT 57.107 30.769 0.00 0.00 30.17 1.98
43 44 8.768019 CATTGATAAGTCGCAAATCATTCTCTA 58.232 33.333 0.00 0.00 30.17 2.43
44 45 7.281774 ACATTGATAAGTCGCAAATCATTCTCT 59.718 33.333 0.00 0.00 30.17 3.10
45 46 7.412853 ACATTGATAAGTCGCAAATCATTCTC 58.587 34.615 0.00 0.00 30.17 2.87
46 47 7.325660 ACATTGATAAGTCGCAAATCATTCT 57.674 32.000 0.00 0.00 30.17 2.40
47 48 8.947940 GTTACATTGATAAGTCGCAAATCATTC 58.052 33.333 0.00 0.00 30.17 2.67
48 49 8.458052 TGTTACATTGATAAGTCGCAAATCATT 58.542 29.630 0.00 0.00 30.17 2.57
49 50 7.984391 TGTTACATTGATAAGTCGCAAATCAT 58.016 30.769 0.00 0.00 30.17 2.45
50 51 7.371126 TGTTACATTGATAAGTCGCAAATCA 57.629 32.000 0.00 0.00 0.00 2.57
51 52 8.667987 TTTGTTACATTGATAAGTCGCAAATC 57.332 30.769 0.00 0.00 0.00 2.17
54 55 9.929722 GATATTTGTTACATTGATAAGTCGCAA 57.070 29.630 0.00 0.00 0.00 4.85
55 56 9.325198 AGATATTTGTTACATTGATAAGTCGCA 57.675 29.630 0.00 0.00 0.00 5.10
164 165 8.877864 TCATCCCATAATGTTAGAGTGTTTTT 57.122 30.769 0.00 0.00 0.00 1.94
165 166 8.877864 TTCATCCCATAATGTTAGAGTGTTTT 57.122 30.769 0.00 0.00 0.00 2.43
166 167 7.557719 CCTTCATCCCATAATGTTAGAGTGTTT 59.442 37.037 0.00 0.00 0.00 2.83
167 168 7.056635 CCTTCATCCCATAATGTTAGAGTGTT 58.943 38.462 0.00 0.00 0.00 3.32
168 169 6.409695 CCCTTCATCCCATAATGTTAGAGTGT 60.410 42.308 0.00 0.00 0.00 3.55
169 170 6.000219 CCCTTCATCCCATAATGTTAGAGTG 59.000 44.000 0.00 0.00 0.00 3.51
170 171 5.911178 TCCCTTCATCCCATAATGTTAGAGT 59.089 40.000 0.00 0.00 0.00 3.24
171 172 6.043706 ACTCCCTTCATCCCATAATGTTAGAG 59.956 42.308 0.00 0.00 0.00 2.43
172 173 5.911178 ACTCCCTTCATCCCATAATGTTAGA 59.089 40.000 0.00 0.00 0.00 2.10
173 174 6.192970 ACTCCCTTCATCCCATAATGTTAG 57.807 41.667 0.00 0.00 0.00 2.34
174 175 7.079700 TCTACTCCCTTCATCCCATAATGTTA 58.920 38.462 0.00 0.00 0.00 2.41
175 176 5.911178 TCTACTCCCTTCATCCCATAATGTT 59.089 40.000 0.00 0.00 0.00 2.71
176 177 5.476983 TCTACTCCCTTCATCCCATAATGT 58.523 41.667 0.00 0.00 0.00 2.71
177 178 6.439636 TTCTACTCCCTTCATCCCATAATG 57.560 41.667 0.00 0.00 0.00 1.90
178 179 8.940012 ATATTCTACTCCCTTCATCCCATAAT 57.060 34.615 0.00 0.00 0.00 1.28
179 180 8.757307 AATATTCTACTCCCTTCATCCCATAA 57.243 34.615 0.00 0.00 0.00 1.90
180 181 8.186985 AGAATATTCTACTCCCTTCATCCCATA 58.813 37.037 16.50 0.00 35.34 2.74
181 182 7.028131 AGAATATTCTACTCCCTTCATCCCAT 58.972 38.462 16.50 0.00 35.34 4.00
182 183 6.270927 CAGAATATTCTACTCCCTTCATCCCA 59.729 42.308 17.53 0.00 35.34 4.37
183 184 6.271159 ACAGAATATTCTACTCCCTTCATCCC 59.729 42.308 17.53 0.00 35.34 3.85
184 185 7.309770 ACAGAATATTCTACTCCCTTCATCC 57.690 40.000 17.53 0.00 35.34 3.51
185 186 9.084533 AGTACAGAATATTCTACTCCCTTCATC 57.915 37.037 17.53 0.09 35.34 2.92
186 187 8.865090 CAGTACAGAATATTCTACTCCCTTCAT 58.135 37.037 17.53 0.00 35.34 2.57
187 188 7.839705 ACAGTACAGAATATTCTACTCCCTTCA 59.160 37.037 17.53 0.00 35.34 3.02
188 189 8.240267 ACAGTACAGAATATTCTACTCCCTTC 57.760 38.462 17.53 3.80 35.34 3.46
189 190 9.710818 TTACAGTACAGAATATTCTACTCCCTT 57.289 33.333 17.53 5.85 35.34 3.95
190 191 9.357161 CTTACAGTACAGAATATTCTACTCCCT 57.643 37.037 17.53 6.99 35.34 4.20
191 192 9.352191 TCTTACAGTACAGAATATTCTACTCCC 57.648 37.037 17.53 4.98 35.34 4.30
194 195 9.924010 ACCTCTTACAGTACAGAATATTCTACT 57.076 33.333 17.53 15.02 35.34 2.57
195 196 9.953697 CACCTCTTACAGTACAGAATATTCTAC 57.046 37.037 17.53 13.06 35.34 2.59
196 197 9.696572 ACACCTCTTACAGTACAGAATATTCTA 57.303 33.333 17.53 0.57 35.34 2.10
197 198 8.596781 ACACCTCTTACAGTACAGAATATTCT 57.403 34.615 12.37 12.37 38.25 2.40
198 199 8.467598 TGACACCTCTTACAGTACAGAATATTC 58.532 37.037 7.41 7.41 0.00 1.75
199 200 8.362464 TGACACCTCTTACAGTACAGAATATT 57.638 34.615 0.00 0.00 0.00 1.28
200 201 7.956328 TGACACCTCTTACAGTACAGAATAT 57.044 36.000 0.00 0.00 0.00 1.28
201 202 7.231925 TGTTGACACCTCTTACAGTACAGAATA 59.768 37.037 0.00 0.00 0.00 1.75
202 203 6.041637 TGTTGACACCTCTTACAGTACAGAAT 59.958 38.462 0.00 0.00 0.00 2.40
203 204 5.361571 TGTTGACACCTCTTACAGTACAGAA 59.638 40.000 0.00 0.00 0.00 3.02
204 205 4.891168 TGTTGACACCTCTTACAGTACAGA 59.109 41.667 0.00 0.00 0.00 3.41
205 206 4.982916 GTGTTGACACCTCTTACAGTACAG 59.017 45.833 2.87 0.00 40.85 2.74
206 207 4.940463 GTGTTGACACCTCTTACAGTACA 58.060 43.478 2.87 0.00 40.85 2.90
219 220 3.001939 CGGGAACAAGTTAGTGTTGACAC 59.998 47.826 6.15 6.15 41.78 3.67
220 221 3.199677 CGGGAACAAGTTAGTGTTGACA 58.800 45.455 0.00 0.00 41.78 3.58
221 222 2.546789 CCGGGAACAAGTTAGTGTTGAC 59.453 50.000 0.00 0.00 41.78 3.18
222 223 2.435069 TCCGGGAACAAGTTAGTGTTGA 59.565 45.455 0.00 0.00 41.78 3.18
223 224 2.546789 GTCCGGGAACAAGTTAGTGTTG 59.453 50.000 0.00 0.00 41.78 3.33
224 225 2.436911 AGTCCGGGAACAAGTTAGTGTT 59.563 45.455 0.00 0.00 44.38 3.32
225 226 2.036862 GAGTCCGGGAACAAGTTAGTGT 59.963 50.000 0.00 0.00 0.00 3.55
226 227 2.612221 GGAGTCCGGGAACAAGTTAGTG 60.612 54.545 0.00 0.00 0.00 2.74
227 228 1.622312 GGAGTCCGGGAACAAGTTAGT 59.378 52.381 0.00 0.00 0.00 2.24
228 229 1.066358 GGGAGTCCGGGAACAAGTTAG 60.066 57.143 0.00 0.00 0.00 2.34
229 230 0.978907 GGGAGTCCGGGAACAAGTTA 59.021 55.000 0.00 0.00 0.00 2.24
230 231 1.759236 GGGAGTCCGGGAACAAGTT 59.241 57.895 0.00 0.00 0.00 2.66
231 232 2.222013 GGGGAGTCCGGGAACAAGT 61.222 63.158 0.00 0.00 0.00 3.16
232 233 1.774894 TTGGGGAGTCCGGGAACAAG 61.775 60.000 0.00 0.00 38.76 3.16
233 234 1.770927 TTGGGGAGTCCGGGAACAA 60.771 57.895 0.00 0.74 38.76 2.83
234 235 2.122324 TTGGGGAGTCCGGGAACA 60.122 61.111 0.00 0.00 38.76 3.18
235 236 1.900545 CTCTTGGGGAGTCCGGGAAC 61.901 65.000 0.00 0.00 38.76 3.62
236 237 1.612442 CTCTTGGGGAGTCCGGGAA 60.612 63.158 0.00 0.00 38.76 3.97
237 238 2.038975 CTCTTGGGGAGTCCGGGA 59.961 66.667 0.00 0.00 38.76 5.14
244 245 6.599638 CCTGTAAATTCTTAACTCTTGGGGAG 59.400 42.308 0.00 0.00 46.87 4.30
245 246 6.045106 ACCTGTAAATTCTTAACTCTTGGGGA 59.955 38.462 0.00 0.00 0.00 4.81
246 247 6.246163 ACCTGTAAATTCTTAACTCTTGGGG 58.754 40.000 0.00 0.00 0.00 4.96
247 248 8.857694 TTACCTGTAAATTCTTAACTCTTGGG 57.142 34.615 0.00 0.00 0.00 4.12
257 258 8.456471 GCCGTTCTAATTTACCTGTAAATTCTT 58.544 33.333 23.95 10.37 46.79 2.52
258 259 7.608761 TGCCGTTCTAATTTACCTGTAAATTCT 59.391 33.333 23.95 10.35 46.79 2.40
259 260 7.754625 TGCCGTTCTAATTTACCTGTAAATTC 58.245 34.615 23.95 13.26 46.79 2.17
261 262 7.875327 ATGCCGTTCTAATTTACCTGTAAAT 57.125 32.000 9.01 9.01 44.89 1.40
262 263 7.690952 AATGCCGTTCTAATTTACCTGTAAA 57.309 32.000 5.05 5.05 39.12 2.01
263 264 7.413219 CGAAATGCCGTTCTAATTTACCTGTAA 60.413 37.037 0.00 0.00 0.00 2.41
264 265 6.036300 CGAAATGCCGTTCTAATTTACCTGTA 59.964 38.462 0.00 0.00 0.00 2.74
265 266 5.163794 CGAAATGCCGTTCTAATTTACCTGT 60.164 40.000 0.00 0.00 0.00 4.00
266 267 5.263185 CGAAATGCCGTTCTAATTTACCTG 58.737 41.667 0.00 0.00 0.00 4.00
267 268 4.334481 CCGAAATGCCGTTCTAATTTACCT 59.666 41.667 0.00 0.00 0.00 3.08
268 269 4.333372 TCCGAAATGCCGTTCTAATTTACC 59.667 41.667 0.00 0.00 0.00 2.85
269 270 5.473796 TCCGAAATGCCGTTCTAATTTAC 57.526 39.130 0.00 0.00 0.00 2.01
270 271 4.034742 GCTCCGAAATGCCGTTCTAATTTA 59.965 41.667 0.00 0.00 0.00 1.40
271 272 3.181500 GCTCCGAAATGCCGTTCTAATTT 60.181 43.478 0.00 0.00 0.00 1.82
272 273 2.354821 GCTCCGAAATGCCGTTCTAATT 59.645 45.455 0.00 0.00 0.00 1.40
273 274 1.940613 GCTCCGAAATGCCGTTCTAAT 59.059 47.619 0.00 0.00 0.00 1.73
274 275 1.066430 AGCTCCGAAATGCCGTTCTAA 60.066 47.619 0.00 0.00 0.00 2.10
275 276 0.535335 AGCTCCGAAATGCCGTTCTA 59.465 50.000 0.00 0.00 0.00 2.10
276 277 0.741221 GAGCTCCGAAATGCCGTTCT 60.741 55.000 0.87 0.00 0.00 3.01
277 278 1.716172 GAGCTCCGAAATGCCGTTC 59.284 57.895 0.87 0.00 0.00 3.95
278 279 2.100631 CGAGCTCCGAAATGCCGTT 61.101 57.895 8.47 0.00 41.76 4.44
279 280 2.509336 CGAGCTCCGAAATGCCGT 60.509 61.111 8.47 0.00 41.76 5.68
280 281 3.264897 CCGAGCTCCGAAATGCCG 61.265 66.667 8.47 0.00 41.76 5.69
281 282 3.577313 GCCGAGCTCCGAAATGCC 61.577 66.667 8.47 0.00 41.76 4.40
282 283 3.577313 GGCCGAGCTCCGAAATGC 61.577 66.667 8.47 1.49 41.76 3.56
283 284 1.884926 GAGGCCGAGCTCCGAAATG 60.885 63.158 8.47 0.00 41.76 2.32
284 285 2.501610 GAGGCCGAGCTCCGAAAT 59.498 61.111 8.47 0.00 41.76 2.17
285 286 3.771160 GGAGGCCGAGCTCCGAAA 61.771 66.667 8.47 0.00 41.76 3.46
299 300 4.227134 CATCCGGCCTCCGTGGAG 62.227 72.222 9.02 9.02 46.80 3.86
301 302 3.622060 AAACATCCGGCCTCCGTGG 62.622 63.158 0.00 0.00 46.80 4.94
302 303 1.241315 AAAAACATCCGGCCTCCGTG 61.241 55.000 0.00 0.00 46.80 4.94
303 304 1.074248 AAAAACATCCGGCCTCCGT 59.926 52.632 0.00 0.00 46.80 4.69
354 355 9.730420 GTGTACTTGTACAAATGTTTTCAGATT 57.270 29.630 14.23 0.00 0.00 2.40
355 356 8.898761 TGTGTACTTGTACAAATGTTTTCAGAT 58.101 29.630 14.23 0.00 0.00 2.90
356 357 8.270080 TGTGTACTTGTACAAATGTTTTCAGA 57.730 30.769 14.23 2.64 0.00 3.27
357 358 8.903570 TTGTGTACTTGTACAAATGTTTTCAG 57.096 30.769 14.23 0.00 34.17 3.02
358 359 7.971168 CCTTGTGTACTTGTACAAATGTTTTCA 59.029 33.333 14.23 4.37 36.47 2.69
359 360 8.185505 TCCTTGTGTACTTGTACAAATGTTTTC 58.814 33.333 14.23 2.08 36.47 2.29
360 361 8.057536 TCCTTGTGTACTTGTACAAATGTTTT 57.942 30.769 14.23 0.00 36.47 2.43
361 362 7.633193 TCCTTGTGTACTTGTACAAATGTTT 57.367 32.000 14.23 0.00 36.47 2.83
362 363 7.284489 ACATCCTTGTGTACTTGTACAAATGTT 59.716 33.333 14.23 0.00 35.98 2.71
363 364 6.770785 ACATCCTTGTGTACTTGTACAAATGT 59.229 34.615 14.23 9.20 35.25 2.71
364 365 7.077605 CACATCCTTGTGTACTTGTACAAATG 58.922 38.462 14.23 11.26 46.68 2.32
365 366 7.202016 CACATCCTTGTGTACTTGTACAAAT 57.798 36.000 14.23 1.60 46.68 2.32
366 367 6.612247 CACATCCTTGTGTACTTGTACAAA 57.388 37.500 14.23 7.37 46.68 2.83
379 380 4.696877 CACACATACACATCACATCCTTGT 59.303 41.667 0.00 0.00 36.15 3.16
380 381 4.696877 ACACACATACACATCACATCCTTG 59.303 41.667 0.00 0.00 0.00 3.61
381 382 4.910195 ACACACATACACATCACATCCTT 58.090 39.130 0.00 0.00 0.00 3.36
382 383 4.558226 ACACACATACACATCACATCCT 57.442 40.909 0.00 0.00 0.00 3.24
383 384 6.735678 TTTACACACATACACATCACATCC 57.264 37.500 0.00 0.00 0.00 3.51
384 385 9.624697 AAATTTTACACACATACACATCACATC 57.375 29.630 0.00 0.00 0.00 3.06
385 386 9.624697 GAAATTTTACACACATACACATCACAT 57.375 29.630 0.00 0.00 0.00 3.21
386 387 8.624776 TGAAATTTTACACACATACACATCACA 58.375 29.630 0.00 0.00 0.00 3.58
387 388 9.117145 CTGAAATTTTACACACATACACATCAC 57.883 33.333 0.00 0.00 0.00 3.06
388 389 9.061435 TCTGAAATTTTACACACATACACATCA 57.939 29.630 0.00 0.00 0.00 3.07
438 439 9.617523 ATTCATCACAAAAGTCCTTGAATTTTT 57.382 25.926 0.04 0.00 37.66 1.94
440 441 9.918630 CTATTCATCACAAAAGTCCTTGAATTT 57.081 29.630 0.00 0.00 34.94 1.82
441 442 9.082313 ACTATTCATCACAAAAGTCCTTGAATT 57.918 29.630 0.00 0.00 34.94 2.17
442 443 8.641498 ACTATTCATCACAAAAGTCCTTGAAT 57.359 30.769 0.00 0.00 36.57 2.57
443 444 9.739276 ATACTATTCATCACAAAAGTCCTTGAA 57.261 29.630 0.00 0.00 0.00 2.69
444 445 9.383519 GATACTATTCATCACAAAAGTCCTTGA 57.616 33.333 0.00 0.00 0.00 3.02
445 446 9.166173 TGATACTATTCATCACAAAAGTCCTTG 57.834 33.333 0.00 0.00 0.00 3.61
446 447 9.911788 ATGATACTATTCATCACAAAAGTCCTT 57.088 29.630 0.00 0.00 35.33 3.36
447 448 9.334947 CATGATACTATTCATCACAAAAGTCCT 57.665 33.333 0.00 0.00 35.33 3.85
448 449 9.113838 ACATGATACTATTCATCACAAAAGTCC 57.886 33.333 0.00 0.00 35.33 3.85
449 450 9.926751 CACATGATACTATTCATCACAAAAGTC 57.073 33.333 0.00 0.00 35.33 3.01
450 451 9.453572 ACACATGATACTATTCATCACAAAAGT 57.546 29.630 0.00 0.00 35.33 2.66
453 454 9.447157 TCAACACATGATACTATTCATCACAAA 57.553 29.630 0.00 0.00 35.33 2.83
454 455 9.447157 TTCAACACATGATACTATTCATCACAA 57.553 29.630 0.00 0.00 38.03 3.33
455 456 9.447157 TTTCAACACATGATACTATTCATCACA 57.553 29.630 0.00 0.00 38.03 3.58
456 457 9.926751 CTTTCAACACATGATACTATTCATCAC 57.073 33.333 0.00 0.00 38.03 3.06
457 458 9.112725 CCTTTCAACACATGATACTATTCATCA 57.887 33.333 0.00 0.00 38.03 3.07
458 459 8.072567 GCCTTTCAACACATGATACTATTCATC 58.927 37.037 0.00 0.00 38.03 2.92
459 460 7.013655 GGCCTTTCAACACATGATACTATTCAT 59.986 37.037 0.00 0.00 38.03 2.57
460 461 6.318648 GGCCTTTCAACACATGATACTATTCA 59.681 38.462 0.00 0.00 38.03 2.57
461 462 6.318648 TGGCCTTTCAACACATGATACTATTC 59.681 38.462 3.32 0.00 38.03 1.75
462 463 6.095440 GTGGCCTTTCAACACATGATACTATT 59.905 38.462 3.32 0.00 38.03 1.73
463 464 5.590259 GTGGCCTTTCAACACATGATACTAT 59.410 40.000 3.32 0.00 38.03 2.12
464 465 4.941263 GTGGCCTTTCAACACATGATACTA 59.059 41.667 3.32 0.00 38.03 1.82
465 466 3.758554 GTGGCCTTTCAACACATGATACT 59.241 43.478 3.32 0.00 38.03 2.12
466 467 3.505680 TGTGGCCTTTCAACACATGATAC 59.494 43.478 3.32 0.00 39.92 2.24
467 468 3.760738 TGTGGCCTTTCAACACATGATA 58.239 40.909 3.32 0.00 39.92 2.15
468 469 2.596346 TGTGGCCTTTCAACACATGAT 58.404 42.857 3.32 0.00 39.92 2.45
469 470 2.064434 TGTGGCCTTTCAACACATGA 57.936 45.000 3.32 0.00 39.92 3.07
473 474 4.881920 ACAAATATGTGGCCTTTCAACAC 58.118 39.130 3.32 0.00 38.69 3.32
474 475 4.832266 AGACAAATATGTGGCCTTTCAACA 59.168 37.500 3.32 0.00 40.74 3.33
475 476 5.391312 AGACAAATATGTGGCCTTTCAAC 57.609 39.130 3.32 0.00 40.74 3.18
476 477 5.774690 AGAAGACAAATATGTGGCCTTTCAA 59.225 36.000 3.32 0.00 40.74 2.69
477 478 5.324409 AGAAGACAAATATGTGGCCTTTCA 58.676 37.500 3.32 0.74 40.74 2.69
478 479 5.904362 AGAAGACAAATATGTGGCCTTTC 57.096 39.130 3.32 0.00 40.74 2.62
479 480 6.458210 CAAAGAAGACAAATATGTGGCCTTT 58.542 36.000 3.32 0.00 40.74 3.11
480 481 5.567423 GCAAAGAAGACAAATATGTGGCCTT 60.567 40.000 3.32 0.00 40.74 4.35
481 482 4.082026 GCAAAGAAGACAAATATGTGGCCT 60.082 41.667 3.32 0.00 40.74 5.19
482 483 4.176271 GCAAAGAAGACAAATATGTGGCC 58.824 43.478 0.00 0.00 40.74 5.36
483 484 4.622740 GTGCAAAGAAGACAAATATGTGGC 59.377 41.667 0.00 0.00 40.74 5.01
484 485 5.771469 TGTGCAAAGAAGACAAATATGTGG 58.229 37.500 0.00 0.00 40.74 4.17
485 486 6.144402 GGTTGTGCAAAGAAGACAAATATGTG 59.856 38.462 0.00 0.00 40.74 3.21
486 487 6.215845 GGTTGTGCAAAGAAGACAAATATGT 58.784 36.000 0.00 0.00 44.25 2.29
487 488 5.634859 GGGTTGTGCAAAGAAGACAAATATG 59.365 40.000 0.00 0.00 31.62 1.78
488 489 5.539955 AGGGTTGTGCAAAGAAGACAAATAT 59.460 36.000 0.00 0.00 31.62 1.28
489 490 4.892934 AGGGTTGTGCAAAGAAGACAAATA 59.107 37.500 0.00 0.00 31.62 1.40
490 491 3.706086 AGGGTTGTGCAAAGAAGACAAAT 59.294 39.130 0.00 0.00 31.62 2.32
491 492 3.096092 AGGGTTGTGCAAAGAAGACAAA 58.904 40.909 0.00 0.00 31.62 2.83
492 493 2.687935 GAGGGTTGTGCAAAGAAGACAA 59.312 45.455 0.00 0.00 0.00 3.18
493 494 2.297701 GAGGGTTGTGCAAAGAAGACA 58.702 47.619 0.00 0.00 0.00 3.41
494 495 2.297701 TGAGGGTTGTGCAAAGAAGAC 58.702 47.619 0.00 0.00 0.00 3.01
495 496 2.727123 TGAGGGTTGTGCAAAGAAGA 57.273 45.000 0.00 0.00 0.00 2.87
496 497 4.202141 TGAAATGAGGGTTGTGCAAAGAAG 60.202 41.667 0.00 0.00 0.00 2.85
497 498 3.703556 TGAAATGAGGGTTGTGCAAAGAA 59.296 39.130 0.00 0.00 0.00 2.52
498 499 3.295093 TGAAATGAGGGTTGTGCAAAGA 58.705 40.909 0.00 0.00 0.00 2.52
499 500 3.731652 TGAAATGAGGGTTGTGCAAAG 57.268 42.857 0.00 0.00 0.00 2.77
500 501 3.196469 TGTTGAAATGAGGGTTGTGCAAA 59.804 39.130 0.00 0.00 0.00 3.68
501 502 2.762887 TGTTGAAATGAGGGTTGTGCAA 59.237 40.909 0.00 0.00 0.00 4.08
502 503 2.382882 TGTTGAAATGAGGGTTGTGCA 58.617 42.857 0.00 0.00 0.00 4.57
503 504 3.665745 ATGTTGAAATGAGGGTTGTGC 57.334 42.857 0.00 0.00 0.00 4.57
504 505 6.527722 CGAAATATGTTGAAATGAGGGTTGTG 59.472 38.462 0.00 0.00 0.00 3.33
505 506 6.208599 ACGAAATATGTTGAAATGAGGGTTGT 59.791 34.615 0.00 0.00 0.00 3.32
506 507 6.620678 ACGAAATATGTTGAAATGAGGGTTG 58.379 36.000 0.00 0.00 0.00 3.77
507 508 6.659242 AGACGAAATATGTTGAAATGAGGGTT 59.341 34.615 0.00 0.00 0.00 4.11
508 509 6.180472 AGACGAAATATGTTGAAATGAGGGT 58.820 36.000 0.00 0.00 0.00 4.34
509 510 6.683974 AGACGAAATATGTTGAAATGAGGG 57.316 37.500 0.00 0.00 0.00 4.30
510 511 7.751732 TCAAGACGAAATATGTTGAAATGAGG 58.248 34.615 0.00 0.00 0.00 3.86
511 512 9.611284 TTTCAAGACGAAATATGTTGAAATGAG 57.389 29.630 6.08 0.00 41.64 2.90
512 513 9.958234 TTTTCAAGACGAAATATGTTGAAATGA 57.042 25.926 9.86 0.00 44.20 2.57
517 518 8.698854 GCAAATTTTCAAGACGAAATATGTTGA 58.301 29.630 0.00 0.00 43.12 3.18
518 519 7.679634 CGCAAATTTTCAAGACGAAATATGTTG 59.320 33.333 0.00 0.00 43.12 3.33
519 520 7.619161 GCGCAAATTTTCAAGACGAAATATGTT 60.619 33.333 0.30 0.00 43.12 2.71
520 521 6.183359 GCGCAAATTTTCAAGACGAAATATGT 60.183 34.615 0.30 0.00 43.12 2.29
521 522 6.171006 GCGCAAATTTTCAAGACGAAATATG 58.829 36.000 0.30 0.00 43.12 1.78
522 523 5.861251 TGCGCAAATTTTCAAGACGAAATAT 59.139 32.000 8.16 0.00 43.12 1.28
523 524 5.116377 GTGCGCAAATTTTCAAGACGAAATA 59.884 36.000 14.00 0.00 43.12 1.40
524 525 4.047822 TGCGCAAATTTTCAAGACGAAAT 58.952 34.783 8.16 0.00 43.12 2.17
525 526 3.241784 GTGCGCAAATTTTCAAGACGAAA 59.758 39.130 14.00 0.00 41.95 3.46
526 527 2.786578 GTGCGCAAATTTTCAAGACGAA 59.213 40.909 14.00 0.00 0.00 3.85
527 528 2.223363 TGTGCGCAAATTTTCAAGACGA 60.223 40.909 14.00 0.00 0.00 4.20
528 529 2.115595 TGTGCGCAAATTTTCAAGACG 58.884 42.857 14.00 0.00 0.00 4.18
529 530 3.490526 ACATGTGCGCAAATTTTCAAGAC 59.509 39.130 14.00 0.00 0.00 3.01
530 531 3.490155 CACATGTGCGCAAATTTTCAAGA 59.510 39.130 14.00 0.00 0.00 3.02
531 532 3.245754 ACACATGTGCGCAAATTTTCAAG 59.754 39.130 25.68 4.15 0.00 3.02
532 533 3.001026 CACACATGTGCGCAAATTTTCAA 59.999 39.130 25.68 0.00 39.39 2.69
533 534 2.538861 CACACATGTGCGCAAATTTTCA 59.461 40.909 25.68 4.80 39.39 2.69
534 535 3.158103 CACACATGTGCGCAAATTTTC 57.842 42.857 25.68 0.00 39.39 2.29
543 544 4.412414 TGGAGACATAACACACATGTGCG 61.412 47.826 25.68 18.95 42.45 5.34
544 545 3.073678 TGGAGACATAACACACATGTGC 58.926 45.455 25.68 6.73 42.45 4.57
559 560 7.315142 TGAAAAATAAAGACATGCATGGAGAC 58.685 34.615 29.41 17.05 0.00 3.36
560 561 7.465353 TGAAAAATAAAGACATGCATGGAGA 57.535 32.000 29.41 11.01 0.00 3.71
561 562 8.712285 AATGAAAAATAAAGACATGCATGGAG 57.288 30.769 29.41 6.29 0.00 3.86
562 563 9.504708 AAAATGAAAAATAAAGACATGCATGGA 57.495 25.926 29.41 10.33 0.00 3.41
624 625 2.436173 AGGGCGGGTTTTGAAAAATTCA 59.564 40.909 0.00 0.00 38.04 2.57
625 626 3.064207 GAGGGCGGGTTTTGAAAAATTC 58.936 45.455 0.00 0.00 0.00 2.17
626 627 2.224426 GGAGGGCGGGTTTTGAAAAATT 60.224 45.455 0.00 0.00 0.00 1.82
627 628 1.346395 GGAGGGCGGGTTTTGAAAAAT 59.654 47.619 0.00 0.00 0.00 1.82
628 629 0.753867 GGAGGGCGGGTTTTGAAAAA 59.246 50.000 0.00 0.00 0.00 1.94
629 630 0.397254 TGGAGGGCGGGTTTTGAAAA 60.397 50.000 0.00 0.00 0.00 2.29
630 631 0.178947 ATGGAGGGCGGGTTTTGAAA 60.179 50.000 0.00 0.00 0.00 2.69
631 632 0.897863 CATGGAGGGCGGGTTTTGAA 60.898 55.000 0.00 0.00 0.00 2.69
632 633 1.304052 CATGGAGGGCGGGTTTTGA 60.304 57.895 0.00 0.00 0.00 2.69
633 634 2.350458 CCATGGAGGGCGGGTTTTG 61.350 63.158 5.56 0.00 0.00 2.44
634 635 2.037208 CCATGGAGGGCGGGTTTT 59.963 61.111 5.56 0.00 0.00 2.43
635 636 2.499303 CTTCCATGGAGGGCGGGTTT 62.499 60.000 16.03 0.00 38.24 3.27
636 637 2.938798 TTCCATGGAGGGCGGGTT 60.939 61.111 15.53 0.00 38.24 4.11
637 638 3.411517 CTTCCATGGAGGGCGGGT 61.412 66.667 16.03 0.00 38.24 5.28
638 639 4.883354 GCTTCCATGGAGGGCGGG 62.883 72.222 24.05 8.77 38.24 6.13
639 640 4.883354 GGCTTCCATGGAGGGCGG 62.883 72.222 30.55 13.70 37.09 6.13
641 642 3.764160 CTCGGCTTCCATGGAGGGC 62.764 68.421 33.12 33.12 42.00 5.19
642 643 2.507944 CTCGGCTTCCATGGAGGG 59.492 66.667 24.05 17.13 38.24 4.30
643 644 2.203126 GCTCGGCTTCCATGGAGG 60.203 66.667 19.29 19.29 39.47 4.30
644 645 1.227497 GAGCTCGGCTTCCATGGAG 60.227 63.158 15.53 10.43 39.88 3.86
645 646 2.735772 GGAGCTCGGCTTCCATGGA 61.736 63.158 11.44 11.44 39.88 3.41
646 647 2.203126 GGAGCTCGGCTTCCATGG 60.203 66.667 4.97 4.97 39.88 3.66
647 648 0.677731 TTTGGAGCTCGGCTTCCATG 60.678 55.000 7.83 0.00 39.88 3.66
648 649 0.393537 CTTTGGAGCTCGGCTTCCAT 60.394 55.000 7.83 0.00 39.88 3.41
649 650 1.003355 CTTTGGAGCTCGGCTTCCA 60.003 57.895 7.83 0.00 39.88 3.53
650 651 2.402572 GCTTTGGAGCTCGGCTTCC 61.403 63.158 7.83 0.00 45.65 3.46
651 652 3.182312 GCTTTGGAGCTCGGCTTC 58.818 61.111 7.83 0.00 45.65 3.86
658 659 8.927997 TTACCTCCGTAAATTGCTTTGGAGCT 62.928 42.308 0.55 0.00 39.32 4.09
659 660 6.829342 TTACCTCCGTAAATTGCTTTGGAGC 61.829 44.000 0.55 0.00 39.18 4.70
660 661 3.081804 ACCTCCGTAAATTGCTTTGGAG 58.918 45.455 0.00 0.00 37.84 3.86
661 662 3.149005 ACCTCCGTAAATTGCTTTGGA 57.851 42.857 0.00 0.00 0.00 3.53
662 663 5.379732 TTTACCTCCGTAAATTGCTTTGG 57.620 39.130 0.00 0.00 39.09 3.28
672 673 9.558396 TCTTTTAAAAGACATTTACCTCCGTAA 57.442 29.630 23.65 0.00 39.95 3.18
673 674 9.729281 ATCTTTTAAAAGACATTTACCTCCGTA 57.271 29.630 28.38 5.26 46.80 4.02
674 675 8.631480 ATCTTTTAAAAGACATTTACCTCCGT 57.369 30.769 28.38 8.96 46.80 4.69
675 676 8.947115 AGATCTTTTAAAAGACATTTACCTCCG 58.053 33.333 28.38 0.89 46.80 4.63
700 701 6.396829 AAGGACATTGTTCCTCTTGAAAAG 57.603 37.500 7.85 0.00 46.06 2.27
701 702 6.790232 AAAGGACATTGTTCCTCTTGAAAA 57.210 33.333 7.85 0.00 46.06 2.29
702 703 6.790232 AAAAGGACATTGTTCCTCTTGAAA 57.210 33.333 7.85 0.00 46.06 2.69
703 704 6.790232 AAAAAGGACATTGTTCCTCTTGAA 57.210 33.333 7.85 0.00 46.06 2.69
727 728 5.163353 GGACATTGTTCCTTTCCCTCAAAAA 60.163 40.000 0.00 0.00 32.24 1.94
728 729 4.343814 GGACATTGTTCCTTTCCCTCAAAA 59.656 41.667 0.00 0.00 32.24 2.44
729 730 3.895041 GGACATTGTTCCTTTCCCTCAAA 59.105 43.478 0.00 0.00 32.24 2.69
730 731 3.117322 TGGACATTGTTCCTTTCCCTCAA 60.117 43.478 0.00 0.00 36.51 3.02
731 732 2.445145 TGGACATTGTTCCTTTCCCTCA 59.555 45.455 0.00 0.00 36.51 3.86
732 733 3.154827 TGGACATTGTTCCTTTCCCTC 57.845 47.619 0.00 0.00 36.51 4.30
733 734 3.181418 ACATGGACATTGTTCCTTTCCCT 60.181 43.478 0.00 0.00 36.51 4.20
734 735 3.056607 CACATGGACATTGTTCCTTTCCC 60.057 47.826 0.00 0.00 36.51 3.97
735 736 3.614870 GCACATGGACATTGTTCCTTTCC 60.615 47.826 0.00 0.00 36.51 3.13
736 737 3.256631 AGCACATGGACATTGTTCCTTTC 59.743 43.478 0.00 0.00 36.51 2.62
737 738 3.233507 AGCACATGGACATTGTTCCTTT 58.766 40.909 0.00 0.00 36.51 3.11
738 739 2.880443 AGCACATGGACATTGTTCCTT 58.120 42.857 0.00 0.00 36.51 3.36
739 740 2.559668 CAAGCACATGGACATTGTTCCT 59.440 45.455 0.00 0.00 36.51 3.36
767 768 0.466922 CCAGATCCAATGGACCTGCC 60.467 60.000 18.34 0.00 41.90 4.85
768 769 0.548031 TCCAGATCCAATGGACCTGC 59.452 55.000 18.34 1.81 41.90 4.85
774 775 1.610102 GCTCCGATCCAGATCCAATGG 60.610 57.143 0.00 0.00 39.33 3.16
775 776 1.610102 GGCTCCGATCCAGATCCAATG 60.610 57.143 2.11 0.00 34.40 2.82
776 777 0.689623 GGCTCCGATCCAGATCCAAT 59.310 55.000 2.11 0.00 34.40 3.16
777 778 1.410850 GGGCTCCGATCCAGATCCAA 61.411 60.000 2.11 0.00 34.40 3.53
778 779 1.838846 GGGCTCCGATCCAGATCCA 60.839 63.158 2.11 0.00 34.40 3.41
779 780 3.064416 GGGCTCCGATCCAGATCC 58.936 66.667 2.11 0.00 34.40 3.36
808 817 3.022607 CTGATCGATGATGCAGCTGTA 57.977 47.619 16.64 12.13 0.00 2.74
816 825 0.599466 AGGCGTGCTGATCGATGATG 60.599 55.000 0.54 0.00 0.00 3.07
817 826 0.599466 CAGGCGTGCTGATCGATGAT 60.599 55.000 0.54 0.00 0.00 2.45
818 827 1.227060 CAGGCGTGCTGATCGATGA 60.227 57.895 0.54 0.00 0.00 2.92
912 922 2.411504 TTTGAATAAGCGGCCCGGC 61.412 57.895 4.77 0.00 0.00 6.13
913 923 1.431845 GTTTGAATAAGCGGCCCGG 59.568 57.895 4.77 0.00 0.00 5.73
914 924 1.431845 GGTTTGAATAAGCGGCCCG 59.568 57.895 0.00 0.00 0.00 6.13
915 925 1.672854 GGGGTTTGAATAAGCGGCCC 61.673 60.000 0.00 0.00 0.00 5.80
916 926 0.683179 AGGGGTTTGAATAAGCGGCC 60.683 55.000 0.00 0.00 0.00 6.13
1005 1015 0.742635 CGAGGAAGCAGAGGAAAGGC 60.743 60.000 0.00 0.00 0.00 4.35
1189 1199 3.934962 GGAGAGGCGGAGGATGGC 61.935 72.222 0.00 0.00 0.00 4.40
1192 1202 4.565850 GGGGGAGAGGCGGAGGAT 62.566 72.222 0.00 0.00 0.00 3.24
1470 1480 3.082579 GCTCTCGCCCTGGTACCAG 62.083 68.421 31.71 31.71 43.26 4.00
1617 1630 6.705863 AATGAGTAAATCAGGAATGAAGCC 57.294 37.500 0.00 0.00 42.53 4.35
1663 1700 6.127054 ACTGGGAATCATTCGATCTCAAGTAA 60.127 38.462 0.00 0.00 0.00 2.24
1664 1701 5.363868 ACTGGGAATCATTCGATCTCAAGTA 59.636 40.000 0.00 0.00 0.00 2.24
1665 1702 4.163078 ACTGGGAATCATTCGATCTCAAGT 59.837 41.667 0.00 0.00 0.00 3.16
1668 1705 3.452264 ACACTGGGAATCATTCGATCTCA 59.548 43.478 0.00 0.00 0.00 3.27
1672 1709 3.198635 ACTGACACTGGGAATCATTCGAT 59.801 43.478 0.00 0.00 0.00 3.59
1685 1722 0.319728 CAGTCCCTCCACTGACACTG 59.680 60.000 0.00 0.00 45.92 3.66
1750 1787 3.054139 TCTCATGGTCATGGAAAGGAAGG 60.054 47.826 10.61 0.00 39.24 3.46
1759 1797 3.349927 TCTTTGCTTCTCATGGTCATGG 58.650 45.455 10.61 2.91 39.24 3.66
1760 1798 4.216902 TGTTCTTTGCTTCTCATGGTCATG 59.783 41.667 4.67 4.67 40.09 3.07
1761 1799 4.401022 TGTTCTTTGCTTCTCATGGTCAT 58.599 39.130 0.00 0.00 0.00 3.06
1762 1800 3.819368 TGTTCTTTGCTTCTCATGGTCA 58.181 40.909 0.00 0.00 0.00 4.02
1763 1801 5.382618 AATGTTCTTTGCTTCTCATGGTC 57.617 39.130 0.00 0.00 0.00 4.02
1764 1802 4.219288 GGAATGTTCTTTGCTTCTCATGGT 59.781 41.667 0.00 0.00 0.00 3.55
1800 1838 0.751452 TGTGTGTACGCCCACTAACA 59.249 50.000 3.51 0.00 36.30 2.41
1817 1855 1.617850 CCAACTCTGCTCTGTCTCTGT 59.382 52.381 0.00 0.00 0.00 3.41
1818 1856 1.617850 ACCAACTCTGCTCTGTCTCTG 59.382 52.381 0.00 0.00 0.00 3.35
1819 1857 2.008242 ACCAACTCTGCTCTGTCTCT 57.992 50.000 0.00 0.00 0.00 3.10
1820 1858 2.823154 ACTACCAACTCTGCTCTGTCTC 59.177 50.000 0.00 0.00 0.00 3.36
1821 1859 2.883026 ACTACCAACTCTGCTCTGTCT 58.117 47.619 0.00 0.00 0.00 3.41
1822 1860 3.759618 ACTACTACCAACTCTGCTCTGTC 59.240 47.826 0.00 0.00 0.00 3.51
1823 1861 3.759618 GACTACTACCAACTCTGCTCTGT 59.240 47.826 0.00 0.00 0.00 3.41
1824 1862 3.181505 CGACTACTACCAACTCTGCTCTG 60.182 52.174 0.00 0.00 0.00 3.35
1874 1912 2.534298 CTTCAGCTGTACGATGTCCTG 58.466 52.381 14.67 0.00 0.00 3.86
1882 1920 0.319900 AGTGTGGCTTCAGCTGTACG 60.320 55.000 14.67 4.50 41.70 3.67
1904 1942 1.376037 GCTAGGACCAGGTGCACAC 60.376 63.158 20.43 8.23 0.00 3.82
2003 2051 3.006247 GCTGCAACCAAAAGTCCAAAAA 58.994 40.909 0.00 0.00 0.00 1.94
2043 2091 2.584236 ACTCGGCTAACCTCGACATAT 58.416 47.619 0.00 0.00 0.00 1.78
2046 2094 1.945394 GATACTCGGCTAACCTCGACA 59.055 52.381 0.00 0.00 0.00 4.35
2125 2173 6.985188 TTTAATTGCTGTAAGTAGAGGCAG 57.015 37.500 0.00 0.00 35.30 4.85
2161 2217 4.382291 TGTCCATAACTAGTTGTGCGTTT 58.618 39.130 22.93 0.00 31.45 3.60
2164 2220 3.585862 ACTGTCCATAACTAGTTGTGCG 58.414 45.455 22.93 16.85 31.45 5.34
2177 2235 7.739825 AGCATATCAACATAACTACTGTCCAT 58.260 34.615 0.00 0.00 0.00 3.41
2189 2247 9.082313 TCTATGAGAAGTGAGCATATCAACATA 57.918 33.333 0.00 0.00 40.43 2.29
2218 2284 7.545362 ACCTGAAACATCAAAAGATCGATAG 57.455 36.000 0.00 0.00 0.00 2.08
2330 2396 4.652131 AACGGCAACCCCATCGCA 62.652 61.111 0.00 0.00 0.00 5.10
2623 2691 3.281727 TCCATTATGGAACTGCAGGAC 57.718 47.619 19.93 11.14 45.00 3.85
2673 2741 6.964807 ATCACCAGCATGCTATAATTCAAA 57.035 33.333 22.19 0.00 31.97 2.69
2674 2742 6.321945 ACAATCACCAGCATGCTATAATTCAA 59.678 34.615 22.19 1.09 31.97 2.69
2675 2743 5.829391 ACAATCACCAGCATGCTATAATTCA 59.171 36.000 22.19 0.94 31.97 2.57
2680 2748 2.880268 GCACAATCACCAGCATGCTATA 59.120 45.455 22.19 6.40 31.97 1.31
2691 2760 2.070783 CCTTTGCAATGCACAATCACC 58.929 47.619 7.72 0.00 38.71 4.02
2706 2775 0.036388 TCTTACGCCTCCAGCCTTTG 60.036 55.000 0.00 0.00 38.78 2.77
2709 2778 0.614979 TCTTCTTACGCCTCCAGCCT 60.615 55.000 0.00 0.00 38.78 4.58
2710 2779 0.249398 TTCTTCTTACGCCTCCAGCC 59.751 55.000 0.00 0.00 38.78 4.85
2711 2780 2.094762 TTTCTTCTTACGCCTCCAGC 57.905 50.000 0.00 0.00 38.52 4.85
2712 2781 5.629079 AATTTTTCTTCTTACGCCTCCAG 57.371 39.130 0.00 0.00 0.00 3.86
2713 2782 7.110155 AGATAATTTTTCTTCTTACGCCTCCA 58.890 34.615 0.00 0.00 0.00 3.86
2714 2783 7.555306 AGATAATTTTTCTTCTTACGCCTCC 57.445 36.000 0.00 0.00 0.00 4.30
2715 2784 8.277018 GCTAGATAATTTTTCTTCTTACGCCTC 58.723 37.037 0.00 0.00 0.00 4.70
2716 2785 7.769044 TGCTAGATAATTTTTCTTCTTACGCCT 59.231 33.333 0.00 0.00 0.00 5.52
2717 2786 7.851472 GTGCTAGATAATTTTTCTTCTTACGCC 59.149 37.037 0.00 0.00 0.00 5.68
2720 2789 9.690434 CACGTGCTAGATAATTTTTCTTCTTAC 57.310 33.333 0.82 0.00 0.00 2.34
2734 2803 2.426024 GTTCCACTCCACGTGCTAGATA 59.574 50.000 19.38 5.02 42.42 1.98
2753 2822 4.327357 CGACGCACTATCTCAAATTCAGTT 59.673 41.667 0.00 0.00 0.00 3.16
2769 2838 2.827555 CACTGAATTTTCTCGACGCAC 58.172 47.619 0.00 0.00 0.00 5.34
2773 2842 1.194547 TGCGCACTGAATTTTCTCGAC 59.805 47.619 5.66 0.00 0.00 4.20
2778 2847 2.339400 CGTTCATGCGCACTGAATTTTC 59.661 45.455 26.56 17.52 35.26 2.29
2789 2858 2.709475 GGGACATCGTTCATGCGC 59.291 61.111 0.00 0.00 35.65 6.09
2790 2859 3.005898 CGGGACATCGTTCATGCG 58.994 61.111 0.00 0.00 35.65 4.73
2791 2860 2.709475 GCGGGACATCGTTCATGC 59.291 61.111 0.00 0.00 35.65 4.06
2793 2862 0.107214 AATGGCGGGACATCGTTCAT 60.107 50.000 0.00 0.00 0.00 2.57
2794 2863 0.537653 TAATGGCGGGACATCGTTCA 59.462 50.000 0.00 0.00 0.00 3.18
2795 2864 1.217882 CTAATGGCGGGACATCGTTC 58.782 55.000 0.00 0.00 0.00 3.95
2796 2865 0.814010 GCTAATGGCGGGACATCGTT 60.814 55.000 0.00 0.00 0.00 3.85
2798 2867 3.642755 GCTAATGGCGGGACATCG 58.357 61.111 0.00 0.00 0.00 3.84
2807 2876 0.179145 CAACTGCTGCAGCTAATGGC 60.179 55.000 36.61 12.64 42.66 4.40
2819 2888 1.898574 CCAGGCGTTTCCAACTGCT 60.899 57.895 0.00 0.00 37.29 4.24
2820 2889 0.887387 TACCAGGCGTTTCCAACTGC 60.887 55.000 0.00 0.00 37.29 4.40
2821 2890 1.737793 GATACCAGGCGTTTCCAACTG 59.262 52.381 0.00 0.00 37.29 3.16
2823 2892 1.092348 GGATACCAGGCGTTTCCAAC 58.908 55.000 0.00 0.00 41.08 3.77
2825 2894 2.378211 TGGATACCAGGCGTTTCCA 58.622 52.632 1.66 1.66 46.66 3.53
2826 2895 1.092348 GTTGGATACCAGGCGTTTCC 58.908 55.000 0.00 0.00 41.61 3.13
2827 2896 2.109425 AGTTGGATACCAGGCGTTTC 57.891 50.000 0.00 0.00 33.81 2.78
2828 2897 2.835764 TCTAGTTGGATACCAGGCGTTT 59.164 45.455 0.00 0.00 33.81 3.60
2829 2898 2.463752 TCTAGTTGGATACCAGGCGTT 58.536 47.619 0.00 0.00 33.81 4.84
2831 2900 2.431057 AGTTCTAGTTGGATACCAGGCG 59.569 50.000 0.00 0.00 33.81 5.52
2833 2902 6.323996 TGACATAGTTCTAGTTGGATACCAGG 59.676 42.308 0.00 0.00 33.81 4.45
2835 2904 7.727578 TTGACATAGTTCTAGTTGGATACCA 57.272 36.000 0.00 0.00 0.00 3.25
2836 2905 8.258708 ACTTTGACATAGTTCTAGTTGGATACC 58.741 37.037 0.00 0.00 0.00 2.73
2837 2906 9.088512 CACTTTGACATAGTTCTAGTTGGATAC 57.911 37.037 0.00 0.00 0.00 2.24
2838 2907 7.764443 GCACTTTGACATAGTTCTAGTTGGATA 59.236 37.037 0.00 0.00 0.00 2.59
2839 2908 6.595716 GCACTTTGACATAGTTCTAGTTGGAT 59.404 38.462 0.00 0.00 0.00 3.41
2840 2909 5.932303 GCACTTTGACATAGTTCTAGTTGGA 59.068 40.000 0.00 0.00 0.00 3.53
2841 2910 5.700832 TGCACTTTGACATAGTTCTAGTTGG 59.299 40.000 0.00 0.00 0.00 3.77
2842 2911 6.785488 TGCACTTTGACATAGTTCTAGTTG 57.215 37.500 0.00 0.00 0.00 3.16
2843 2912 9.672673 AATATGCACTTTGACATAGTTCTAGTT 57.327 29.630 0.00 0.00 32.56 2.24
2844 2913 9.672673 AAATATGCACTTTGACATAGTTCTAGT 57.327 29.630 0.00 0.00 33.18 2.57
2850 2919 9.461312 TCCTTTAAATATGCACTTTGACATAGT 57.539 29.630 6.39 0.00 32.56 2.12
2853 2922 7.761249 GCTTCCTTTAAATATGCACTTTGACAT 59.239 33.333 6.39 0.00 0.00 3.06
2854 2923 7.090173 GCTTCCTTTAAATATGCACTTTGACA 58.910 34.615 6.39 0.00 0.00 3.58
2855 2924 6.531594 GGCTTCCTTTAAATATGCACTTTGAC 59.468 38.462 6.39 0.00 0.00 3.18
2856 2925 6.210385 TGGCTTCCTTTAAATATGCACTTTGA 59.790 34.615 6.39 0.00 0.00 2.69
2857 2926 6.397272 TGGCTTCCTTTAAATATGCACTTTG 58.603 36.000 6.39 0.00 0.00 2.77
2858 2927 6.603940 TGGCTTCCTTTAAATATGCACTTT 57.396 33.333 0.00 0.00 0.00 2.66
2868 2937 8.765488 TGATGATATGATTGGCTTCCTTTAAA 57.235 30.769 0.00 0.00 0.00 1.52
2872 2941 7.562454 TCTTTTGATGATATGATTGGCTTCCTT 59.438 33.333 0.00 0.00 0.00 3.36
2873 2942 7.064866 TCTTTTGATGATATGATTGGCTTCCT 58.935 34.615 0.00 0.00 0.00 3.36
2874 2943 7.281040 TCTTTTGATGATATGATTGGCTTCC 57.719 36.000 0.00 0.00 0.00 3.46
2875 2944 9.760077 ATTTCTTTTGATGATATGATTGGCTTC 57.240 29.630 0.00 0.00 0.00 3.86
2933 3003 8.291032 GCTCGATAAACTTAGTAGATAGCTTCA 58.709 37.037 0.00 0.00 0.00 3.02
2940 3010 6.260493 ACACGAGCTCGATAAACTTAGTAGAT 59.740 38.462 40.58 11.04 43.02 1.98
2942 3012 5.808403 ACACGAGCTCGATAAACTTAGTAG 58.192 41.667 40.58 15.15 43.02 2.57
2944 3014 4.698583 ACACGAGCTCGATAAACTTAGT 57.301 40.909 40.58 19.72 43.02 2.24
2945 3015 5.571741 TGAAACACGAGCTCGATAAACTTAG 59.428 40.000 40.58 19.15 43.02 2.18
2946 3016 5.463286 TGAAACACGAGCTCGATAAACTTA 58.537 37.500 40.58 16.99 43.02 2.24
2947 3017 4.304110 TGAAACACGAGCTCGATAAACTT 58.696 39.130 40.58 22.65 43.02 2.66
3015 3093 6.112058 TGCCAAAGCTTGTTCTGTAATTTTT 58.888 32.000 0.00 0.00 40.80 1.94
3020 3098 5.070001 ACTATGCCAAAGCTTGTTCTGTAA 58.930 37.500 0.00 0.00 40.80 2.41
3028 3106 8.165239 TGGTAATATTACTATGCCAAAGCTTG 57.835 34.615 21.86 0.00 35.43 4.01
3046 3124 9.762381 AATTGTTTCTTCCCAGTATTGGTAATA 57.238 29.630 3.28 0.00 43.40 0.98
3047 3125 8.664669 AATTGTTTCTTCCCAGTATTGGTAAT 57.335 30.769 3.28 0.00 43.40 1.89
3050 3128 7.007723 TGTAATTGTTTCTTCCCAGTATTGGT 58.992 34.615 3.28 0.00 43.40 3.67
3119 3568 3.565902 CAGACAAAAGGGAAACAGGAGAC 59.434 47.826 0.00 0.00 0.00 3.36
3450 3906 7.518211 CGGAGAAACGAAAATGTGCATATATGA 60.518 37.037 17.10 0.00 35.47 2.15
3458 3914 2.681152 ACGGAGAAACGAAAATGTGC 57.319 45.000 0.00 0.00 37.61 4.57
3467 3923 2.211806 TGGTTTACCAACGGAGAAACG 58.788 47.619 0.00 0.00 44.35 3.60
3476 3932 4.017177 AGAGTAAGCCTGGTTTACCAAC 57.983 45.455 24.28 17.34 46.97 3.77
3535 3991 0.945813 TGCCAAAAGACGTTAACCGG 59.054 50.000 0.00 0.00 42.24 5.28
3538 3994 4.483476 ACTCATGCCAAAAGACGTTAAC 57.517 40.909 0.00 0.00 0.00 2.01
3541 3997 3.130340 ACAAACTCATGCCAAAAGACGTT 59.870 39.130 0.00 0.00 0.00 3.99
3544 4000 5.108517 TGAAACAAACTCATGCCAAAAGAC 58.891 37.500 0.00 0.00 0.00 3.01
3562 4018 1.180029 ATGCATCACCAGGCTGAAAC 58.820 50.000 17.94 0.00 0.00 2.78
3563 4019 2.804986 TATGCATCACCAGGCTGAAA 57.195 45.000 17.94 0.48 0.00 2.69
3605 4061 0.727398 GTAAGCACACGGATCAAGCC 59.273 55.000 0.00 0.00 0.00 4.35
3620 4076 8.076178 AGAAGAAACAAAAACATCCATCGTAAG 58.924 33.333 0.00 0.00 0.00 2.34
3624 4080 7.141363 AGAAGAAGAAACAAAAACATCCATCG 58.859 34.615 0.00 0.00 0.00 3.84
3666 4123 2.049959 CTAATGAGATCGAGCGCACAG 58.950 52.381 9.83 6.36 0.00 3.66
3667 4124 1.865655 GCTAATGAGATCGAGCGCACA 60.866 52.381 9.83 4.97 0.00 4.57
3668 4125 0.781191 GCTAATGAGATCGAGCGCAC 59.219 55.000 9.83 0.96 0.00 5.34
3669 4126 0.670706 AGCTAATGAGATCGAGCGCA 59.329 50.000 10.08 10.08 39.96 6.09
3670 4127 1.059173 CAGCTAATGAGATCGAGCGC 58.941 55.000 0.00 0.00 39.96 5.92
3705 4162 6.765036 GGTTCAACATACTCATCAGTCATCAT 59.235 38.462 0.00 0.00 33.62 2.45
3727 4184 1.151450 CAGGGGTGCTTCACTGGTT 59.849 57.895 1.89 0.00 34.40 3.67
3728 4185 2.833913 CCAGGGGTGCTTCACTGGT 61.834 63.158 16.67 0.00 44.21 4.00
3745 4202 3.425162 ACCATGAACAGAAGGAACTCC 57.575 47.619 0.00 0.00 38.49 3.85
3766 4223 2.353208 GCCACGAGAGAGAACAATCACT 60.353 50.000 0.00 0.00 0.00 3.41
3800 4257 3.063670 TCGCATGCACAAATTATTCCG 57.936 42.857 19.57 0.00 0.00 4.30
3806 4263 1.001181 AGGCTTTCGCATGCACAAATT 59.999 42.857 19.57 2.48 38.10 1.82
3818 4275 0.393537 ATTCCTCCTGCAGGCTTTCG 60.394 55.000 28.91 12.38 43.08 3.46
3828 4285 4.212143 TCAGATGTTGTGATTCCTCCTG 57.788 45.455 0.00 0.00 0.00 3.86
3835 4292 6.015688 ACAAGCTCAAATCAGATGTTGTGATT 60.016 34.615 0.00 0.00 44.77 2.57
3913 4370 2.695585 AGTGGGAGGCTCCTATTTAGG 58.304 52.381 31.39 0.00 45.02 2.69
3927 4384 2.239654 CCAGGAAAATCAGCTAGTGGGA 59.760 50.000 0.00 0.00 0.00 4.37
3984 4441 3.605634 CACCCATAGTCAATCAAACGGA 58.394 45.455 0.00 0.00 0.00 4.69
4023 4480 1.609501 CGGGAGGAGGGTCAACTCA 60.610 63.158 0.00 0.00 39.27 3.41
4033 4490 1.072159 GGATGGATTGCGGGAGGAG 59.928 63.158 0.00 0.00 0.00 3.69
4131 4588 4.950050 TCGATGAGAATTAAAGGAGGAGC 58.050 43.478 0.00 0.00 0.00 4.70
4147 5173 3.458163 GGTGGCCGGACTCGATGA 61.458 66.667 9.82 0.00 39.00 2.92
4180 5206 1.468054 GGCAGATTTGTTAGGCAAGCG 60.468 52.381 0.00 0.00 38.47 4.68
4185 5211 1.745653 GTGGAGGCAGATTTGTTAGGC 59.254 52.381 0.00 0.00 0.00 3.93
4210 5236 0.902516 GAGCACTGGAGGAGGTGTCT 60.903 60.000 0.00 0.00 36.03 3.41
4214 5240 2.500815 TAGCGAGCACTGGAGGAGGT 62.501 60.000 0.00 0.00 0.00 3.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.