Multiple sequence alignment - TraesCS5B01G557100

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BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G557100 chr5B 100.000 4467 0 0 4032 8498 705136307 705140773 0.000000e+00 8250.0
1 TraesCS5B01G557100 chr5B 100.000 3595 0 0 1 3595 705132276 705135870 0.000000e+00 6639.0
2 TraesCS5B01G557100 chr5B 84.371 1702 212 33 5077 6745 705271272 705272952 0.000000e+00 1620.0
3 TraesCS5B01G557100 chr5B 84.585 1544 183 33 5219 6734 705258263 705259779 0.000000e+00 1482.0
4 TraesCS5B01G557100 chr5B 86.520 1276 134 16 5451 6691 705065731 705067003 0.000000e+00 1369.0
5 TraesCS5B01G557100 chr5B 93.316 763 47 4 2835 3595 694675086 694674326 0.000000e+00 1123.0
6 TraesCS5B01G557100 chr5B 84.148 839 99 13 6778 7596 705067002 705067826 0.000000e+00 782.0
7 TraesCS5B01G557100 chr5B 93.390 469 24 3 7771 8239 685659014 685659475 0.000000e+00 688.0
8 TraesCS5B01G557100 chr5B 88.372 473 41 10 7773 8239 685659813 685659349 2.680000e-154 556.0
9 TraesCS5B01G557100 chr5B 90.499 421 21 7 7774 8189 471338212 471337806 9.710000e-149 538.0
10 TraesCS5B01G557100 chr5B 94.014 284 17 0 4053 4336 509461425 509461142 1.690000e-116 431.0
11 TraesCS5B01G557100 chr5B 93.310 284 16 2 4053 4336 468001814 468002094 4.750000e-112 416.0
12 TraesCS5B01G557100 chr5B 89.457 313 29 2 6749 7057 705273006 705273318 8.000000e-105 392.0
13 TraesCS5B01G557100 chr5B 94.309 246 11 2 7774 8019 615866086 615865844 2.900000e-99 374.0
14 TraesCS5B01G557100 chr5B 92.000 250 16 4 8191 8438 705140284 705140037 1.760000e-91 348.0
15 TraesCS5B01G557100 chr5B 91.700 253 17 4 7762 8012 705140713 705140463 1.760000e-91 348.0
16 TraesCS5B01G557100 chr5B 92.083 240 17 2 8188 8427 685659575 685659812 3.800000e-88 337.0
17 TraesCS5B01G557100 chr5B 84.330 351 38 9 7079 7416 705273375 705273721 2.290000e-85 327.0
18 TraesCS5B01G557100 chr5B 91.250 240 17 4 8191 8429 685659251 685659015 2.960000e-84 324.0
19 TraesCS5B01G557100 chr5B 88.477 243 22 4 8188 8429 615865851 615866088 1.080000e-73 289.0
20 TraesCS5B01G557100 chr5B 88.043 184 17 5 7414 7595 705273803 705273983 6.680000e-51 213.0
21 TraesCS5B01G557100 chr5B 82.018 228 27 7 1135 1362 705264354 705264567 1.880000e-41 182.0
22 TraesCS5B01G557100 chr5B 81.373 204 24 10 4468 4664 705270302 705270498 4.110000e-33 154.0
23 TraesCS5B01G557100 chr5B 89.474 57 0 1 438 494 705101091 705101141 5.510000e-07 67.6
24 TraesCS5B01G557100 chr4A 91.304 2668 181 28 5142 7773 609928573 609925921 0.000000e+00 3594.0
25 TraesCS5B01G557100 chr4A 83.234 2016 237 62 4740 6708 609818556 609816595 0.000000e+00 1757.0
26 TraesCS5B01G557100 chr4A 83.450 1565 195 32 5223 6734 609920244 609918691 0.000000e+00 1397.0
27 TraesCS5B01G557100 chr4A 84.667 1187 85 39 1585 2708 636390947 636389795 0.000000e+00 1094.0
28 TraesCS5B01G557100 chr4A 83.702 1221 89 44 1569 2707 603334604 603335796 0.000000e+00 1051.0
29 TraesCS5B01G557100 chr4A 85.629 334 38 6 7318 7650 609810317 609809993 8.170000e-90 342.0
30 TraesCS5B01G557100 chr4A 98.592 71 1 0 8428 8498 609925929 609925859 8.960000e-25 126.0
31 TraesCS5B01G557100 chr4A 89.873 79 1 2 416 494 609930076 609930005 2.530000e-15 95.3
32 TraesCS5B01G557100 chr4A 92.727 55 0 4 970 1024 609929684 609929634 9.150000e-10 76.8
33 TraesCS5B01G557100 chr4A 97.143 35 1 0 5064 5098 609928631 609928597 9.210000e-05 60.2
34 TraesCS5B01G557100 chr5D 93.577 2382 96 19 4396 6741 557547031 557544671 0.000000e+00 3498.0
35 TraesCS5B01G557100 chr5D 95.713 1003 38 3 6773 7773 557544669 557543670 0.000000e+00 1609.0
36 TraesCS5B01G557100 chr5D 82.832 1829 212 56 4918 6691 558032378 558034159 0.000000e+00 1544.0
37 TraesCS5B01G557100 chr5D 83.208 1602 193 38 5189 6737 557538644 557537066 0.000000e+00 1399.0
38 TraesCS5B01G557100 chr5D 84.606 838 96 12 6778 7596 558034158 558034981 0.000000e+00 802.0
39 TraesCS5B01G557100 chr5D 85.977 706 53 23 851 1541 557547856 557547182 0.000000e+00 713.0
40 TraesCS5B01G557100 chr5D 80.568 669 104 22 7769 8429 479784272 479784922 7.660000e-135 492.0
41 TraesCS5B01G557100 chr5D 83.924 423 54 10 7769 8182 486090888 486091305 8.000000e-105 392.0
42 TraesCS5B01G557100 chr5D 82.439 410 40 18 7774 8168 498082720 498083112 6.360000e-86 329.0
43 TraesCS5B01G557100 chr5D 88.976 254 26 2 6805 7057 557536982 557536730 6.400000e-81 313.0
44 TraesCS5B01G557100 chr5D 96.454 141 5 0 2522 2662 554852593 554852453 5.130000e-57 233.0
45 TraesCS5B01G557100 chr5D 84.422 199 29 2 14 211 521097224 521097421 2.420000e-45 195.0
46 TraesCS5B01G557100 chr5D 88.199 161 14 4 8286 8445 486091033 486090877 4.050000e-43 187.0
47 TraesCS5B01G557100 chr5D 80.800 250 35 11 8191 8435 72367625 72367384 5.240000e-42 183.0
48 TraesCS5B01G557100 chr5D 93.443 122 8 0 736 857 240084475 240084596 1.880000e-41 182.0
49 TraesCS5B01G557100 chr5D 87.898 157 14 4 8284 8439 72368021 72368173 6.780000e-41 180.0
50 TraesCS5B01G557100 chr5D 78.716 296 39 15 1135 1424 551209549 551209826 8.770000e-40 176.0
51 TraesCS5B01G557100 chr5D 85.333 150 18 3 7761 7910 389003848 389003993 1.480000e-32 152.0
52 TraesCS5B01G557100 chr5D 75.645 349 56 19 7763 8104 455601426 455601752 6.870000e-31 147.0
53 TraesCS5B01G557100 chr5D 85.841 113 16 0 7773 7885 35843509 35843397 4.170000e-23 121.0
54 TraesCS5B01G557100 chr5D 83.478 115 18 1 7771 7885 35838426 35838539 1.170000e-18 106.0
55 TraesCS5B01G557100 chr5D 98.182 55 1 0 8431 8485 557543675 557543621 7.020000e-16 97.1
56 TraesCS5B01G557100 chr5D 84.000 100 10 1 6179 6272 125512115 125512214 3.270000e-14 91.6
57 TraesCS5B01G557100 chr5D 89.855 69 1 1 425 493 557548320 557548258 5.470000e-12 84.2
58 TraesCS5B01G557100 chr5D 97.727 44 1 0 690 733 557547899 557547856 9.150000e-10 76.8
59 TraesCS5B01G557100 chr1D 92.894 1154 58 13 1570 2704 306679153 306680301 0.000000e+00 1655.0
60 TraesCS5B01G557100 chr1D 91.796 1158 54 19 1570 2704 66559304 66560443 0.000000e+00 1574.0
61 TraesCS5B01G557100 chr1D 93.963 762 43 3 2836 3595 464379783 464380543 0.000000e+00 1149.0
62 TraesCS5B01G557100 chr1D 77.937 698 99 35 7773 8428 434367889 434368573 1.340000e-102 385.0
63 TraesCS5B01G557100 chr1D 80.000 440 69 16 7994 8427 86212694 86213120 2.980000e-79 307.0
64 TraesCS5B01G557100 chr1D 79.814 322 49 12 8116 8429 419723854 419724167 3.990000e-53 220.0
65 TraesCS5B01G557100 chr1D 88.312 154 15 3 8284 8436 178417051 178417202 1.880000e-41 182.0
66 TraesCS5B01G557100 chr1D 94.118 119 7 0 736 854 284915946 284915828 1.880000e-41 182.0
67 TraesCS5B01G557100 chr1D 88.000 150 17 1 8286 8435 418571182 418571330 8.770000e-40 176.0
68 TraesCS5B01G557100 chr1D 88.889 144 14 2 8284 8427 434368031 434367890 8.770000e-40 176.0
69 TraesCS5B01G557100 chr6D 94.102 763 38 7 2837 3595 450349820 450350579 0.000000e+00 1153.0
70 TraesCS5B01G557100 chr6D 79.882 1521 233 33 5248 6728 30283806 30282319 0.000000e+00 1046.0
71 TraesCS5B01G557100 chr6D 78.369 1447 240 33 5342 6738 30247661 30246238 0.000000e+00 870.0
72 TraesCS5B01G557100 chr6D 79.009 767 123 28 6749 7490 30282260 30281507 2.760000e-134 490.0
73 TraesCS5B01G557100 chr6D 78.656 759 124 27 6756 7490 30246178 30245434 3.590000e-128 470.0
74 TraesCS5B01G557100 chr6D 80.120 669 100 24 7773 8428 344800408 344799760 1.290000e-127 468.0
75 TraesCS5B01G557100 chr6D 78.524 759 125 27 6756 7490 30237369 30236625 1.670000e-126 464.0
76 TraesCS5B01G557100 chr6D 83.765 425 51 14 7771 8182 466542238 466542657 3.720000e-103 387.0
77 TraesCS5B01G557100 chr6D 85.220 318 45 2 6736 7052 30225231 30224915 8.230000e-85 326.0
78 TraesCS5B01G557100 chr6D 81.301 246 37 8 8191 8433 428889382 428889143 3.130000e-44 191.0
79 TraesCS5B01G557100 chr6D 86.628 172 17 5 8284 8454 315351967 315351801 1.460000e-42 185.0
80 TraesCS5B01G557100 chr6D 90.210 143 13 1 8286 8428 460249556 460249415 1.460000e-42 185.0
81 TraesCS5B01G557100 chr6D 89.116 147 14 2 8284 8430 27578935 27579079 1.880000e-41 182.0
82 TraesCS5B01G557100 chr6D 84.810 158 19 5 7760 7916 423545405 423545252 4.110000e-33 154.0
83 TraesCS5B01G557100 chr6D 85.124 121 17 1 7765 7885 105551806 105551687 1.160000e-23 122.0
84 TraesCS5B01G557100 chr6D 84.821 112 16 1 7774 7885 12672320 12672430 2.510000e-20 111.0
85 TraesCS5B01G557100 chr6B 93.557 776 43 7 2825 3595 573274461 573275234 0.000000e+00 1149.0
86 TraesCS5B01G557100 chr6B 78.627 772 126 27 6748 7494 57324286 57325043 7.720000e-130 475.0
87 TraesCS5B01G557100 chr6B 78.488 767 127 26 6749 7490 57286971 57287724 1.290000e-127 468.0
88 TraesCS5B01G557100 chr6B 94.215 121 7 0 736 856 343032851 343032971 1.460000e-42 185.0
89 TraesCS5B01G557100 chr2D 93.498 769 42 7 2830 3595 598652396 598653159 0.000000e+00 1136.0
90 TraesCS5B01G557100 chr2D 80.631 666 106 20 7770 8429 532160371 532161019 2.130000e-135 494.0
91 TraesCS5B01G557100 chr2D 80.572 664 95 18 7774 8428 635085112 635084474 1.660000e-131 481.0
92 TraesCS5B01G557100 chr2D 79.161 691 98 29 7769 8436 425738707 425739374 3.640000e-118 436.0
93 TraesCS5B01G557100 chr2D 84.019 413 41 11 7774 8170 646454996 646455399 2.900000e-99 374.0
94 TraesCS5B01G557100 chr2D 89.394 198 13 4 2516 2706 351383046 351382850 8.520000e-60 243.0
95 TraesCS5B01G557100 chr2D 90.411 146 13 1 8286 8431 425738851 425738707 3.130000e-44 191.0
96 TraesCS5B01G557100 chr2D 88.889 153 15 2 8286 8437 646455136 646454985 4.050000e-43 187.0
97 TraesCS5B01G557100 chr2D 94.167 120 7 0 736 855 572692734 572692615 5.240000e-42 183.0
98 TraesCS5B01G557100 chr2D 78.716 296 39 15 1135 1424 60313330 60313053 8.770000e-40 176.0
99 TraesCS5B01G557100 chr2D 83.803 142 17 5 7762 7901 2654291 2654428 6.920000e-26 130.0
100 TraesCS5B01G557100 chr7B 93.464 765 44 6 2834 3595 82717510 82716749 0.000000e+00 1131.0
101 TraesCS5B01G557100 chr7B 93.447 763 44 6 2836 3595 577233472 577234231 0.000000e+00 1127.0
102 TraesCS5B01G557100 chr7B 93.127 291 19 1 4053 4343 676127774 676128063 7.880000e-115 425.0
103 TraesCS5B01G557100 chr7B 90.795 239 18 4 8191 8429 163000861 163000627 4.950000e-82 316.0
104 TraesCS5B01G557100 chr7B 92.000 225 16 2 2036 2258 509634535 509634759 1.780000e-81 315.0
105 TraesCS5B01G557100 chr7B 96.154 52 2 0 1715 1766 509620093 509620144 1.520000e-12 86.1
106 TraesCS5B01G557100 chr7B 97.778 45 1 0 1669 1713 509619934 509619978 2.540000e-10 78.7
107 TraesCS5B01G557100 chr2B 92.848 783 48 8 2817 3594 729962537 729961758 0.000000e+00 1129.0
108 TraesCS5B01G557100 chr2B 93.298 761 48 3 2837 3595 93636883 93637642 0.000000e+00 1120.0
109 TraesCS5B01G557100 chr2B 88.563 682 56 17 7762 8435 87751455 87752122 0.000000e+00 808.0
110 TraesCS5B01G557100 chr2B 93.594 281 18 0 4055 4335 93637639 93637919 3.670000e-113 420.0
111 TraesCS5B01G557100 chr2B 89.960 249 20 4 8191 8438 87751699 87751455 4.950000e-82 316.0
112 TraesCS5B01G557100 chr2B 90.840 131 12 0 736 866 358974467 358974597 8.770000e-40 176.0
113 TraesCS5B01G557100 chr2B 84.516 155 23 1 77 230 729198278 729198124 1.480000e-32 152.0
114 TraesCS5B01G557100 chr2B 89.796 49 5 0 233 281 796046129 796046177 7.120000e-06 63.9
115 TraesCS5B01G557100 chr3A 84.706 1190 83 36 1580 2705 693592498 693593652 0.000000e+00 1098.0
116 TraesCS5B01G557100 chr3A 83.740 123 20 0 10 132 717258468 717258346 5.390000e-22 117.0
117 TraesCS5B01G557100 chr3B 80.625 1409 215 28 5338 6721 811446100 811447475 0.000000e+00 1037.0
118 TraesCS5B01G557100 chr3B 94.035 285 15 2 4053 4336 699670917 699670634 1.690000e-116 431.0
119 TraesCS5B01G557100 chr3B 93.286 283 18 1 4053 4335 434637568 434637849 4.750000e-112 416.0
120 TraesCS5B01G557100 chr3B 92.857 126 7 2 736 859 725714429 725714304 1.880000e-41 182.0
121 TraesCS5B01G557100 chr6A 80.513 1365 217 26 5392 6728 32659898 32661241 0.000000e+00 1002.0
122 TraesCS5B01G557100 chr6A 79.383 1426 229 40 5340 6729 32668808 32670204 0.000000e+00 944.0
123 TraesCS5B01G557100 chr6A 78.859 771 117 30 6748 7490 32670264 32671016 5.970000e-131 479.0
124 TraesCS5B01G557100 chr1B 81.956 1125 82 50 1571 2649 39599563 39598514 0.000000e+00 841.0
125 TraesCS5B01G557100 chr1B 95.064 466 20 3 7774 8239 453202576 453202114 0.000000e+00 730.0
126 TraesCS5B01G557100 chr1B 92.077 467 31 6 7774 8239 403530437 403529976 0.000000e+00 652.0
127 TraesCS5B01G557100 chr1B 89.597 471 38 10 7769 8233 453201769 453202234 9.500000e-164 588.0
128 TraesCS5B01G557100 chr1B 87.898 471 44 12 7769 8233 403529633 403530096 7.500000e-150 542.0
129 TraesCS5B01G557100 chr1B 92.388 289 17 3 4053 4341 89513312 89513595 2.860000e-109 407.0
130 TraesCS5B01G557100 chr1B 91.696 289 21 3 7779 8066 675680801 675681087 1.720000e-106 398.0
131 TraesCS5B01G557100 chr1B 93.776 241 14 1 8191 8431 453202009 453201770 2.260000e-95 361.0
132 TraesCS5B01G557100 chr1B 91.632 239 16 4 8192 8429 453202343 453202578 2.290000e-85 327.0
133 TraesCS5B01G557100 chr1B 94.258 209 12 0 1580 1788 31536013 31536221 3.830000e-83 320.0
134 TraesCS5B01G557100 chr1B 94.258 209 12 0 1580 1788 31559113 31559321 3.830000e-83 320.0
135 TraesCS5B01G557100 chr1B 90.833 240 20 2 8192 8431 403529870 403529633 3.830000e-83 320.0
136 TraesCS5B01G557100 chr1B 90.558 233 17 5 8191 8422 675681029 675680801 3.850000e-78 303.0
137 TraesCS5B01G557100 chr1B 88.477 243 23 5 8188 8429 403530201 403530439 1.080000e-73 289.0
138 TraesCS5B01G557100 chr1B 80.165 363 38 12 2072 2415 31565035 31565382 3.070000e-59 241.0
139 TraesCS5B01G557100 chr1B 83.206 262 30 9 1794 2049 31536674 31536927 2.390000e-55 228.0
140 TraesCS5B01G557100 chr1B 83.142 261 32 8 1794 2049 31559774 31560027 2.390000e-55 228.0
141 TraesCS5B01G557100 chr1B 78.832 274 47 8 11 281 309496948 309496683 3.150000e-39 174.0
142 TraesCS5B01G557100 chr1B 83.333 162 12 7 2526 2677 565750089 565749933 1.490000e-27 135.0
143 TraesCS5B01G557100 chr5A 92.994 471 28 5 7770 8239 402124633 402124167 0.000000e+00 682.0
144 TraesCS5B01G557100 chr5A 88.273 469 41 10 7772 8234 402123828 402124288 4.480000e-152 549.0
145 TraesCS5B01G557100 chr5A 92.857 238 14 3 8191 8427 402124065 402123830 8.170000e-90 342.0
146 TraesCS5B01G557100 chr5A 90.574 244 19 3 8188 8430 402124393 402124633 3.830000e-83 320.0
147 TraesCS5B01G557100 chr5A 79.703 202 24 15 1137 1333 705535221 705535032 6.920000e-26 130.0
148 TraesCS5B01G557100 chr7D 81.168 685 97 26 7764 8436 13508570 13509234 9.780000e-144 521.0
149 TraesCS5B01G557100 chr7D 81.024 664 102 20 7774 8429 95103678 95104325 2.740000e-139 507.0
150 TraesCS5B01G557100 chr7D 81.024 664 102 20 7774 8429 112414772 112415419 2.740000e-139 507.0
151 TraesCS5B01G557100 chr7D 91.525 295 21 3 4053 4344 70149179 70149472 3.690000e-108 403.0
152 TraesCS5B01G557100 chr7D 81.633 245 39 5 8188 8430 71818688 71818928 1.870000e-46 198.0
153 TraesCS5B01G557100 chr7D 79.054 296 38 15 1135 1424 543342375 543342098 1.880000e-41 182.0
154 TraesCS5B01G557100 chr7D 78.716 296 39 15 1135 1424 26668770 26668493 8.770000e-40 176.0
155 TraesCS5B01G557100 chr7D 78.716 296 39 15 1135 1424 609813616 609813893 8.770000e-40 176.0
156 TraesCS5B01G557100 chr7D 85.714 112 16 0 7774 7885 310287574 310287463 1.500000e-22 119.0
157 TraesCS5B01G557100 chr7D 84.821 112 17 0 7774 7885 310282390 310282501 6.970000e-21 113.0
158 TraesCS5B01G557100 chr4D 80.717 669 101 23 7772 8429 438434664 438434013 5.920000e-136 496.0
159 TraesCS5B01G557100 chr4D 80.183 328 40 14 8116 8430 222689529 222689844 1.110000e-53 222.0
160 TraesCS5B01G557100 chr4D 79.880 333 41 12 8116 8433 273155572 273155251 3.990000e-53 220.0
161 TraesCS5B01G557100 chr4D 81.224 245 36 8 8188 8427 149439549 149439788 1.130000e-43 189.0
162 TraesCS5B01G557100 chr4D 89.726 146 13 2 8284 8429 416067452 416067309 1.460000e-42 185.0
163 TraesCS5B01G557100 chr4D 87.975 158 16 3 8284 8440 60143817 60143662 5.240000e-42 183.0
164 TraesCS5B01G557100 chr4D 89.583 144 14 1 8286 8429 50340468 50340610 1.880000e-41 182.0
165 TraesCS5B01G557100 chr4D 87.342 158 16 4 8284 8439 506195102 506194947 2.440000e-40 178.0
166 TraesCS5B01G557100 chr4D 87.662 154 16 3 8284 8436 60144308 60144459 8.770000e-40 176.0
167 TraesCS5B01G557100 chrUn 78.361 781 132 24 6736 7490 71720180 71720949 9.980000e-129 472.0
168 TraesCS5B01G557100 chrUn 93.548 124 8 0 736 859 100620763 100620886 1.460000e-42 185.0
169 TraesCS5B01G557100 chr4B 94.035 285 14 3 4054 4336 667484856 667484573 6.100000e-116 429.0
170 TraesCS5B01G557100 chr3D 90.541 148 12 2 8284 8431 33171270 33171415 2.420000e-45 195.0
171 TraesCS5B01G557100 chr3D 81.746 252 26 6 8191 8431 416371635 416371393 8.710000e-45 193.0
172 TraesCS5B01G557100 chr3D 94.915 118 6 0 736 853 498226243 498226126 1.460000e-42 185.0
173 TraesCS5B01G557100 chr3D 88.742 151 15 2 8286 8435 609802836 609802985 5.240000e-42 183.0
174 TraesCS5B01G557100 chr3D 88.312 154 15 3 8284 8437 8557127 8557277 1.880000e-41 182.0
175 TraesCS5B01G557100 chr3D 79.054 296 38 15 1135 1424 580207707 580207984 1.880000e-41 182.0
176 TraesCS5B01G557100 chr3D 84.270 178 18 7 1252 1424 501322154 501321982 1.900000e-36 165.0
177 TraesCS5B01G557100 chr3D 93.333 60 4 0 8116 8175 465959812 465959753 1.170000e-13 89.8
178 TraesCS5B01G557100 chr3D 88.158 76 5 3 8116 8190 465959282 465959354 4.230000e-13 87.9
179 TraesCS5B01G557100 chr7A 93.496 123 8 0 732 854 547526048 547525926 5.240000e-42 183.0
180 TraesCS5B01G557100 chr2A 77.341 331 60 5 4 319 778761671 778762001 1.880000e-41 182.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G557100 chr5B 705132276 705140773 8497 False 7444.500000 8250 100.000000 1 8498 2 chr5B.!!$F8 8497
1 TraesCS5B01G557100 chr5B 705258263 705259779 1516 False 1482.000000 1482 84.585000 5219 6734 1 chr5B.!!$F4 1515
2 TraesCS5B01G557100 chr5B 694674326 694675086 760 True 1123.000000 1123 93.316000 2835 3595 1 chr5B.!!$R4 760
3 TraesCS5B01G557100 chr5B 705065731 705067826 2095 False 1075.500000 1369 85.334000 5451 7596 2 chr5B.!!$F7 2145
4 TraesCS5B01G557100 chr5B 705270302 705273983 3681 False 541.200000 1620 85.514800 4468 7595 5 chr5B.!!$F9 3127
5 TraesCS5B01G557100 chr5B 685659014 685659812 798 False 512.500000 688 92.736500 7771 8427 2 chr5B.!!$F6 656
6 TraesCS5B01G557100 chr5B 685659015 685659813 798 True 440.000000 556 89.811000 7773 8429 2 chr5B.!!$R5 656
7 TraesCS5B01G557100 chr5B 705140037 705140713 676 True 348.000000 348 91.850000 7762 8438 2 chr5B.!!$R6 676
8 TraesCS5B01G557100 chr4A 609816595 609818556 1961 True 1757.000000 1757 83.234000 4740 6708 1 chr4A.!!$R2 1968
9 TraesCS5B01G557100 chr4A 609918691 609920244 1553 True 1397.000000 1397 83.450000 5223 6734 1 chr4A.!!$R3 1511
10 TraesCS5B01G557100 chr4A 636389795 636390947 1152 True 1094.000000 1094 84.667000 1585 2708 1 chr4A.!!$R4 1123
11 TraesCS5B01G557100 chr4A 603334604 603335796 1192 False 1051.000000 1051 83.702000 1569 2707 1 chr4A.!!$F1 1138
12 TraesCS5B01G557100 chr4A 609925859 609930076 4217 True 790.460000 3594 93.927800 416 8498 5 chr4A.!!$R5 8082
13 TraesCS5B01G557100 chr5D 558032378 558034981 2603 False 1173.000000 1544 83.719000 4918 7596 2 chr5D.!!$F12 2678
14 TraesCS5B01G557100 chr5D 557543621 557548320 4699 True 1013.016667 3498 93.505167 425 8485 6 chr5D.!!$R6 8060
15 TraesCS5B01G557100 chr5D 557536730 557538644 1914 True 856.000000 1399 86.092000 5189 7057 2 chr5D.!!$R5 1868
16 TraesCS5B01G557100 chr5D 479784272 479784922 650 False 492.000000 492 80.568000 7769 8429 1 chr5D.!!$F7 660
17 TraesCS5B01G557100 chr1D 306679153 306680301 1148 False 1655.000000 1655 92.894000 1570 2704 1 chr1D.!!$F4 1134
18 TraesCS5B01G557100 chr1D 66559304 66560443 1139 False 1574.000000 1574 91.796000 1570 2704 1 chr1D.!!$F1 1134
19 TraesCS5B01G557100 chr1D 464379783 464380543 760 False 1149.000000 1149 93.963000 2836 3595 1 chr1D.!!$F8 759
20 TraesCS5B01G557100 chr1D 434367889 434368573 684 False 385.000000 385 77.937000 7773 8428 1 chr1D.!!$F7 655
21 TraesCS5B01G557100 chr6D 450349820 450350579 759 False 1153.000000 1153 94.102000 2837 3595 1 chr6D.!!$F3 758
22 TraesCS5B01G557100 chr6D 30281507 30283806 2299 True 768.000000 1046 79.445500 5248 7490 2 chr6D.!!$R10 2242
23 TraesCS5B01G557100 chr6D 30245434 30247661 2227 True 670.000000 870 78.512500 5342 7490 2 chr6D.!!$R9 2148
24 TraesCS5B01G557100 chr6D 344799760 344800408 648 True 468.000000 468 80.120000 7773 8428 1 chr6D.!!$R5 655
25 TraesCS5B01G557100 chr6D 30236625 30237369 744 True 464.000000 464 78.524000 6756 7490 1 chr6D.!!$R2 734
26 TraesCS5B01G557100 chr6B 573274461 573275234 773 False 1149.000000 1149 93.557000 2825 3595 1 chr6B.!!$F4 770
27 TraesCS5B01G557100 chr6B 57324286 57325043 757 False 475.000000 475 78.627000 6748 7494 1 chr6B.!!$F2 746
28 TraesCS5B01G557100 chr6B 57286971 57287724 753 False 468.000000 468 78.488000 6749 7490 1 chr6B.!!$F1 741
29 TraesCS5B01G557100 chr2D 598652396 598653159 763 False 1136.000000 1136 93.498000 2830 3595 1 chr2D.!!$F4 765
30 TraesCS5B01G557100 chr2D 532160371 532161019 648 False 494.000000 494 80.631000 7770 8429 1 chr2D.!!$F3 659
31 TraesCS5B01G557100 chr2D 635084474 635085112 638 True 481.000000 481 80.572000 7774 8428 1 chr2D.!!$R5 654
32 TraesCS5B01G557100 chr2D 425738707 425739374 667 False 436.000000 436 79.161000 7769 8436 1 chr2D.!!$F2 667
33 TraesCS5B01G557100 chr7B 82716749 82717510 761 True 1131.000000 1131 93.464000 2834 3595 1 chr7B.!!$R1 761
34 TraesCS5B01G557100 chr7B 577233472 577234231 759 False 1127.000000 1127 93.447000 2836 3595 1 chr7B.!!$F2 759
35 TraesCS5B01G557100 chr2B 729961758 729962537 779 True 1129.000000 1129 92.848000 2817 3594 1 chr2B.!!$R3 777
36 TraesCS5B01G557100 chr2B 87751455 87752122 667 False 808.000000 808 88.563000 7762 8435 1 chr2B.!!$F1 673
37 TraesCS5B01G557100 chr2B 93636883 93637919 1036 False 770.000000 1120 93.446000 2837 4335 2 chr2B.!!$F4 1498
38 TraesCS5B01G557100 chr3A 693592498 693593652 1154 False 1098.000000 1098 84.706000 1580 2705 1 chr3A.!!$F1 1125
39 TraesCS5B01G557100 chr3B 811446100 811447475 1375 False 1037.000000 1037 80.625000 5338 6721 1 chr3B.!!$F2 1383
40 TraesCS5B01G557100 chr6A 32659898 32661241 1343 False 1002.000000 1002 80.513000 5392 6728 1 chr6A.!!$F1 1336
41 TraesCS5B01G557100 chr6A 32668808 32671016 2208 False 711.500000 944 79.121000 5340 7490 2 chr6A.!!$F2 2150
42 TraesCS5B01G557100 chr1B 39598514 39599563 1049 True 841.000000 841 81.956000 1571 2649 1 chr1B.!!$R1 1078
43 TraesCS5B01G557100 chr1B 453201770 453202576 806 True 545.500000 730 94.420000 7774 8431 2 chr1B.!!$R6 657
44 TraesCS5B01G557100 chr1B 403529633 403530437 804 True 486.000000 652 91.455000 7774 8431 2 chr1B.!!$R5 657
45 TraesCS5B01G557100 chr1B 453201769 453202578 809 False 457.500000 588 90.614500 7769 8429 2 chr1B.!!$F7 660
46 TraesCS5B01G557100 chr1B 403529633 403530439 806 False 415.500000 542 88.187500 7769 8429 2 chr1B.!!$F6 660
47 TraesCS5B01G557100 chr1B 31536013 31536927 914 False 274.000000 320 88.732000 1580 2049 2 chr1B.!!$F4 469
48 TraesCS5B01G557100 chr1B 31559113 31560027 914 False 274.000000 320 88.700000 1580 2049 2 chr1B.!!$F5 469
49 TraesCS5B01G557100 chr5A 402123830 402124633 803 True 512.000000 682 92.925500 7770 8427 2 chr5A.!!$R2 657
50 TraesCS5B01G557100 chr5A 402123828 402124633 805 False 434.500000 549 89.423500 7772 8430 2 chr5A.!!$F1 658
51 TraesCS5B01G557100 chr7D 13508570 13509234 664 False 521.000000 521 81.168000 7764 8436 1 chr7D.!!$F1 672
52 TraesCS5B01G557100 chr7D 95103678 95104325 647 False 507.000000 507 81.024000 7774 8429 1 chr7D.!!$F4 655
53 TraesCS5B01G557100 chr7D 112414772 112415419 647 False 507.000000 507 81.024000 7774 8429 1 chr7D.!!$F5 655
54 TraesCS5B01G557100 chr4D 438434013 438434664 651 True 496.000000 496 80.717000 7772 8429 1 chr4D.!!$R4 657
55 TraesCS5B01G557100 chrUn 71720180 71720949 769 False 472.000000 472 78.361000 6736 7490 1 chrUn.!!$F1 754

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
377 378 0.033894 TTAAGGGACCGGATTTGCCC 60.034 55.000 9.46 10.74 41.00 5.36 F
915 1097 0.106708 ACTTGCTCAGTTGAAGCCGA 59.893 50.000 0.00 0.00 27.32 5.54 F
1846 2565 0.674581 TTACGAAGCGGGAGAGACGA 60.675 55.000 0.00 0.00 0.00 4.20 F
1878 2598 0.740868 GCCTGTTCTATGCGCACTGA 60.741 55.000 14.90 11.66 0.00 3.41 F
2525 3310 1.078848 AAGAGGTGACCATGAGCGC 60.079 57.895 3.63 0.00 0.00 5.92 F
3455 4253 1.501169 CGTTTTCCTTTCGTACCGGT 58.499 50.000 13.98 13.98 0.00 5.28 F
4212 5012 0.839946 AGGAGGATAAGCGGCAACAT 59.160 50.000 1.45 0.00 0.00 2.71 F
4579 5396 0.043334 AGGACAGGACTGCCTACCAT 59.957 55.000 11.78 0.00 44.80 3.55 F
5046 6302 1.006227 GGGGAGGGAAAGGAGGGAT 59.994 63.158 0.00 0.00 0.00 3.85 F
5615 6954 0.034863 TAGTTTGGGGCCATTCGGTC 60.035 55.000 4.39 0.00 35.48 4.79 F
6927 8419 0.029834 GATGCATCGGTTCATGGTGC 59.970 55.000 11.68 0.00 36.39 5.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1919 2647 1.148310 GTAGCTGACGCTCAAGCAAA 58.852 50.000 0.00 0.00 45.15 3.68 R
2494 3279 0.602905 ACCTCTTGGTTCTTTCGCGG 60.603 55.000 6.13 0.00 46.05 6.46 R
2998 3791 0.325602 TAAATCCGGACTGCGGGTTT 59.674 50.000 22.02 22.02 36.04 3.27 R
3573 4373 2.959030 TCTCTCTCTCTCTCTCTCTCGG 59.041 54.545 0.00 0.00 0.00 4.63 R
4054 4854 0.478507 CCTCCCTCCCTCTCTCTCTC 59.521 65.000 0.00 0.00 0.00 3.20 R
4260 5060 0.825840 AACCCAACAACCATCACCCG 60.826 55.000 0.00 0.00 0.00 5.28 R
5135 6397 1.305201 TGTCTTGTTTTCTCCCGTGC 58.695 50.000 0.00 0.00 0.00 5.34 R
5588 6924 1.427368 TGGCCCCAAACTATGTTGAGT 59.573 47.619 0.00 0.00 0.00 3.41 R
6892 8384 1.033746 CATCCGCTTCCTGGCAATGT 61.034 55.000 0.00 0.00 0.00 2.71 R
7455 9116 0.911045 TCATGCTCCAAGCCCTGAGA 60.911 55.000 0.00 0.00 41.51 3.27 R
8258 10152 2.423577 ACCGCCAGATGAACAGTAAAC 58.576 47.619 0.00 0.00 0.00 2.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 1.710013 CACATAGTGGTGGACGTCAC 58.290 55.000 18.91 13.10 45.34 3.67
36 37 4.773117 GACGTCACCGGCTCGTCC 62.773 72.222 25.54 13.91 45.08 4.79
39 40 4.436998 GTCACCGGCTCGTCCCAG 62.437 72.222 0.00 0.00 0.00 4.45
62 63 6.467723 GGACGTATCCATCAACAATATGAC 57.532 41.667 0.00 0.00 45.47 3.06
63 64 5.118664 GGACGTATCCATCAACAATATGACG 59.881 44.000 0.00 0.00 45.47 4.35
64 65 5.597806 ACGTATCCATCAACAATATGACGT 58.402 37.500 0.00 0.00 33.26 4.34
65 66 5.690409 ACGTATCCATCAACAATATGACGTC 59.310 40.000 9.11 9.11 32.95 4.34
66 67 5.118664 CGTATCCATCAACAATATGACGTCC 59.881 44.000 14.12 0.00 30.82 4.79
67 68 4.479786 TCCATCAACAATATGACGTCCA 57.520 40.909 14.12 0.58 30.82 4.02
68 69 4.188462 TCCATCAACAATATGACGTCCAC 58.812 43.478 14.12 0.00 30.82 4.02
69 70 3.312421 CCATCAACAATATGACGTCCACC 59.688 47.826 14.12 0.00 30.82 4.61
70 71 2.612604 TCAACAATATGACGTCCACCG 58.387 47.619 14.12 0.19 44.03 4.94
71 72 2.231721 TCAACAATATGACGTCCACCGA 59.768 45.455 14.12 0.00 40.70 4.69
72 73 2.288961 ACAATATGACGTCCACCGAC 57.711 50.000 14.12 0.00 40.70 4.79
73 74 1.546923 ACAATATGACGTCCACCGACA 59.453 47.619 14.12 0.00 44.73 4.35
74 75 1.924524 CAATATGACGTCCACCGACAC 59.075 52.381 14.12 0.00 43.54 3.67
75 76 0.458669 ATATGACGTCCACCGACACC 59.541 55.000 14.12 0.00 43.54 4.16
76 77 1.925415 TATGACGTCCACCGACACCG 61.925 60.000 14.12 0.00 43.54 4.94
77 78 3.969802 GACGTCCACCGACACCGT 61.970 66.667 3.51 0.00 39.11 4.83
78 79 3.489277 GACGTCCACCGACACCGTT 62.489 63.158 3.51 0.00 39.11 4.44
79 80 2.732094 CGTCCACCGACACCGTTC 60.732 66.667 0.00 0.00 39.11 3.95
80 81 2.732094 GTCCACCGACACCGTTCG 60.732 66.667 0.00 0.00 38.99 3.95
109 110 4.485554 CCGACGAGGAAGAGCAAG 57.514 61.111 0.00 0.00 45.00 4.01
110 111 1.153745 CCGACGAGGAAGAGCAAGG 60.154 63.158 0.00 0.00 45.00 3.61
111 112 1.807573 CGACGAGGAAGAGCAAGGC 60.808 63.158 0.00 0.00 0.00 4.35
112 113 1.293498 GACGAGGAAGAGCAAGGCA 59.707 57.895 0.00 0.00 0.00 4.75
113 114 0.107945 GACGAGGAAGAGCAAGGCAT 60.108 55.000 0.00 0.00 0.00 4.40
114 115 0.392193 ACGAGGAAGAGCAAGGCATG 60.392 55.000 0.00 0.00 0.00 4.06
115 116 1.094073 CGAGGAAGAGCAAGGCATGG 61.094 60.000 0.00 0.00 0.00 3.66
116 117 0.750911 GAGGAAGAGCAAGGCATGGG 60.751 60.000 0.00 0.00 0.00 4.00
117 118 1.210204 AGGAAGAGCAAGGCATGGGA 61.210 55.000 0.00 0.00 0.00 4.37
118 119 0.750911 GGAAGAGCAAGGCATGGGAG 60.751 60.000 0.00 0.00 0.00 4.30
119 120 0.254178 GAAGAGCAAGGCATGGGAGA 59.746 55.000 0.00 0.00 0.00 3.71
120 121 0.700564 AAGAGCAAGGCATGGGAGAA 59.299 50.000 0.00 0.00 0.00 2.87
121 122 0.255318 AGAGCAAGGCATGGGAGAAG 59.745 55.000 0.00 0.00 0.00 2.85
122 123 0.750911 GAGCAAGGCATGGGAGAAGG 60.751 60.000 0.00 0.00 0.00 3.46
123 124 2.421399 GCAAGGCATGGGAGAAGGC 61.421 63.158 0.00 0.00 0.00 4.35
124 125 2.117156 CAAGGCATGGGAGAAGGCG 61.117 63.158 0.00 0.00 0.00 5.52
125 126 3.350031 AAGGCATGGGAGAAGGCGG 62.350 63.158 0.00 0.00 0.00 6.13
126 127 4.115199 GGCATGGGAGAAGGCGGT 62.115 66.667 0.00 0.00 0.00 5.68
127 128 2.825836 GCATGGGAGAAGGCGGTG 60.826 66.667 0.00 0.00 0.00 4.94
128 129 2.825836 CATGGGAGAAGGCGGTGC 60.826 66.667 0.00 0.00 0.00 5.01
138 139 3.140814 GGCGGTGCCTTCAATCCC 61.141 66.667 0.00 0.00 46.69 3.85
139 140 3.508840 GCGGTGCCTTCAATCCCG 61.509 66.667 0.00 0.00 41.50 5.14
140 141 2.046314 CGGTGCCTTCAATCCCGT 60.046 61.111 0.00 0.00 34.10 5.28
141 142 2.398554 CGGTGCCTTCAATCCCGTG 61.399 63.158 0.00 0.00 34.10 4.94
142 143 1.002624 GGTGCCTTCAATCCCGTGA 60.003 57.895 0.00 0.00 0.00 4.35
143 144 1.026718 GGTGCCTTCAATCCCGTGAG 61.027 60.000 0.00 0.00 0.00 3.51
144 145 1.377202 TGCCTTCAATCCCGTGAGC 60.377 57.895 0.00 0.00 0.00 4.26
145 146 2.115291 GCCTTCAATCCCGTGAGCC 61.115 63.158 0.00 0.00 0.00 4.70
146 147 1.815421 CCTTCAATCCCGTGAGCCG 60.815 63.158 0.00 0.00 0.00 5.52
147 148 1.218047 CTTCAATCCCGTGAGCCGA 59.782 57.895 0.00 0.00 39.56 5.54
148 149 1.079405 TTCAATCCCGTGAGCCGAC 60.079 57.895 0.00 0.00 39.56 4.79
149 150 1.541310 TTCAATCCCGTGAGCCGACT 61.541 55.000 0.00 0.00 39.56 4.18
150 151 1.519455 CAATCCCGTGAGCCGACTC 60.519 63.158 0.00 0.00 43.76 3.36
151 152 3.064987 AATCCCGTGAGCCGACTCG 62.065 63.158 0.00 0.00 46.69 4.18
153 154 4.778415 CCCGTGAGCCGACTCGTG 62.778 72.222 0.00 0.00 46.69 4.35
165 166 4.155733 CTCGTGCCCCATGCCGTA 62.156 66.667 0.00 0.00 40.16 4.02
166 167 4.460683 TCGTGCCCCATGCCGTAC 62.461 66.667 0.00 0.00 40.16 3.67
167 168 4.467084 CGTGCCCCATGCCGTACT 62.467 66.667 0.00 0.00 40.16 2.73
168 169 2.045340 GTGCCCCATGCCGTACTT 60.045 61.111 0.00 0.00 40.16 2.24
169 170 1.677633 GTGCCCCATGCCGTACTTT 60.678 57.895 0.00 0.00 40.16 2.66
170 171 0.393267 GTGCCCCATGCCGTACTTTA 60.393 55.000 0.00 0.00 40.16 1.85
171 172 0.393267 TGCCCCATGCCGTACTTTAC 60.393 55.000 0.00 0.00 40.16 2.01
172 173 1.099295 GCCCCATGCCGTACTTTACC 61.099 60.000 0.00 0.00 0.00 2.85
173 174 0.253610 CCCCATGCCGTACTTTACCA 59.746 55.000 0.00 0.00 0.00 3.25
174 175 1.133915 CCCCATGCCGTACTTTACCAT 60.134 52.381 0.00 0.00 0.00 3.55
175 176 1.946768 CCCATGCCGTACTTTACCATG 59.053 52.381 0.00 0.00 34.55 3.66
176 177 1.333619 CCATGCCGTACTTTACCATGC 59.666 52.381 0.00 0.00 33.70 4.06
177 178 1.333619 CATGCCGTACTTTACCATGCC 59.666 52.381 0.00 0.00 0.00 4.40
178 179 0.741574 TGCCGTACTTTACCATGCCG 60.742 55.000 0.00 0.00 0.00 5.69
179 180 1.433837 GCCGTACTTTACCATGCCGG 61.434 60.000 0.00 0.00 42.50 6.13
180 181 1.433837 CCGTACTTTACCATGCCGGC 61.434 60.000 22.73 22.73 39.03 6.13
181 182 1.758319 CGTACTTTACCATGCCGGCG 61.758 60.000 23.90 10.49 39.03 6.46
182 183 0.460635 GTACTTTACCATGCCGGCGA 60.461 55.000 23.90 11.80 39.03 5.54
183 184 0.460635 TACTTTACCATGCCGGCGAC 60.461 55.000 23.90 0.00 39.03 5.19
184 185 2.437002 TTTACCATGCCGGCGACC 60.437 61.111 23.90 0.00 39.03 4.79
194 195 4.752879 CGGCGACCGGACCAACAT 62.753 66.667 9.46 0.00 44.15 2.71
195 196 2.359478 GGCGACCGGACCAACATT 60.359 61.111 9.46 0.00 0.00 2.71
196 197 2.396157 GGCGACCGGACCAACATTC 61.396 63.158 9.46 0.00 0.00 2.67
197 198 1.375523 GCGACCGGACCAACATTCT 60.376 57.895 9.46 0.00 0.00 2.40
198 199 1.635663 GCGACCGGACCAACATTCTG 61.636 60.000 9.46 0.00 0.00 3.02
199 200 1.019278 CGACCGGACCAACATTCTGG 61.019 60.000 9.46 0.00 44.22 3.86
200 201 0.676782 GACCGGACCAACATTCTGGG 60.677 60.000 9.46 0.00 43.09 4.45
201 202 1.131303 ACCGGACCAACATTCTGGGA 61.131 55.000 9.46 0.00 43.09 4.37
202 203 0.392998 CCGGACCAACATTCTGGGAG 60.393 60.000 0.00 0.00 41.16 4.30
203 204 1.026718 CGGACCAACATTCTGGGAGC 61.027 60.000 0.00 0.00 41.16 4.70
204 205 1.026718 GGACCAACATTCTGGGAGCG 61.027 60.000 0.00 0.00 41.16 5.03
205 206 1.648467 GACCAACATTCTGGGAGCGC 61.648 60.000 0.00 0.00 41.16 5.92
206 207 1.675310 CCAACATTCTGGGAGCGCA 60.675 57.895 11.47 0.00 32.32 6.09
207 208 1.651240 CCAACATTCTGGGAGCGCAG 61.651 60.000 11.47 8.11 32.32 5.18
220 221 3.630204 CGCAGCCGACCATATGAC 58.370 61.111 3.65 0.00 36.29 3.06
221 222 1.227234 CGCAGCCGACCATATGACA 60.227 57.895 3.65 0.00 36.29 3.58
222 223 0.601046 CGCAGCCGACCATATGACAT 60.601 55.000 3.65 0.00 36.29 3.06
223 224 0.870393 GCAGCCGACCATATGACATG 59.130 55.000 3.65 0.00 0.00 3.21
224 225 1.516161 CAGCCGACCATATGACATGG 58.484 55.000 3.65 1.70 44.54 3.66
225 226 0.397941 AGCCGACCATATGACATGGG 59.602 55.000 3.65 2.34 43.32 4.00
226 227 1.237285 GCCGACCATATGACATGGGC 61.237 60.000 3.65 7.94 43.79 5.36
229 230 1.229428 GACCATATGACATGGGCACG 58.771 55.000 3.65 0.00 46.48 5.34
230 231 0.819259 ACCATATGACATGGGCACGC 60.819 55.000 3.65 0.00 43.32 5.34
231 232 0.818852 CCATATGACATGGGCACGCA 60.819 55.000 3.65 0.00 35.58 5.24
232 233 1.241165 CATATGACATGGGCACGCAT 58.759 50.000 0.00 0.00 0.00 4.73
233 234 1.198408 CATATGACATGGGCACGCATC 59.802 52.381 0.00 0.00 0.00 3.91
234 235 0.534877 TATGACATGGGCACGCATCC 60.535 55.000 0.00 0.00 0.00 3.51
235 236 3.576356 GACATGGGCACGCATCCG 61.576 66.667 0.00 0.00 41.14 4.18
238 239 4.424711 ATGGGCACGCATCCGGTT 62.425 61.111 0.00 0.00 39.22 4.44
239 240 3.037686 ATGGGCACGCATCCGGTTA 62.038 57.895 0.00 0.00 39.22 2.85
240 241 2.895372 GGGCACGCATCCGGTTAG 60.895 66.667 0.00 0.00 39.22 2.34
241 242 2.185867 GGCACGCATCCGGTTAGA 59.814 61.111 0.00 0.00 39.22 2.10
242 243 1.227556 GGCACGCATCCGGTTAGAT 60.228 57.895 0.00 0.00 39.22 1.98
243 244 0.814010 GGCACGCATCCGGTTAGATT 60.814 55.000 0.00 0.00 39.22 2.40
244 245 1.539496 GGCACGCATCCGGTTAGATTA 60.539 52.381 0.00 0.00 39.22 1.75
245 246 1.792949 GCACGCATCCGGTTAGATTAG 59.207 52.381 0.00 0.00 39.22 1.73
246 247 2.545113 GCACGCATCCGGTTAGATTAGA 60.545 50.000 0.00 0.00 39.22 2.10
247 248 3.861131 GCACGCATCCGGTTAGATTAGAT 60.861 47.826 0.00 0.00 39.22 1.98
248 249 4.307432 CACGCATCCGGTTAGATTAGATT 58.693 43.478 0.00 0.00 39.22 2.40
249 250 4.750098 CACGCATCCGGTTAGATTAGATTT 59.250 41.667 0.00 0.00 39.22 2.17
250 251 4.989168 ACGCATCCGGTTAGATTAGATTTC 59.011 41.667 0.00 0.00 39.22 2.17
251 252 4.988540 CGCATCCGGTTAGATTAGATTTCA 59.011 41.667 0.00 0.00 0.00 2.69
252 253 5.107453 CGCATCCGGTTAGATTAGATTTCAC 60.107 44.000 0.00 0.00 0.00 3.18
253 254 5.107453 GCATCCGGTTAGATTAGATTTCACG 60.107 44.000 0.00 0.00 0.00 4.35
254 255 5.587388 TCCGGTTAGATTAGATTTCACGT 57.413 39.130 0.00 0.00 0.00 4.49
255 256 5.969423 TCCGGTTAGATTAGATTTCACGTT 58.031 37.500 0.00 0.00 0.00 3.99
256 257 5.808540 TCCGGTTAGATTAGATTTCACGTTG 59.191 40.000 0.00 0.00 0.00 4.10
257 258 5.490213 CGGTTAGATTAGATTTCACGTTGC 58.510 41.667 0.00 0.00 0.00 4.17
258 259 5.062934 CGGTTAGATTAGATTTCACGTTGCA 59.937 40.000 0.00 0.00 0.00 4.08
259 260 6.238103 CGGTTAGATTAGATTTCACGTTGCAT 60.238 38.462 0.00 0.00 0.00 3.96
260 261 7.472543 GGTTAGATTAGATTTCACGTTGCATT 58.527 34.615 0.00 0.00 0.00 3.56
261 262 7.429340 GGTTAGATTAGATTTCACGTTGCATTG 59.571 37.037 0.00 0.00 0.00 2.82
262 263 6.741992 AGATTAGATTTCACGTTGCATTGA 57.258 33.333 0.00 0.00 0.00 2.57
263 264 7.144722 AGATTAGATTTCACGTTGCATTGAA 57.855 32.000 0.00 0.00 0.00 2.69
264 265 7.023575 AGATTAGATTTCACGTTGCATTGAAC 58.976 34.615 5.62 0.00 31.42 3.18
265 266 4.566545 AGATTTCACGTTGCATTGAACA 57.433 36.364 5.62 0.40 31.42 3.18
266 267 4.930963 AGATTTCACGTTGCATTGAACAA 58.069 34.783 5.62 0.00 31.42 2.83
267 268 5.531634 AGATTTCACGTTGCATTGAACAAT 58.468 33.333 5.62 0.00 31.42 2.71
268 269 6.676950 AGATTTCACGTTGCATTGAACAATA 58.323 32.000 5.62 0.00 31.42 1.90
269 270 7.315142 AGATTTCACGTTGCATTGAACAATAT 58.685 30.769 5.62 0.00 31.42 1.28
270 271 6.687653 TTTCACGTTGCATTGAACAATATG 57.312 33.333 5.62 0.00 31.42 1.78
271 272 4.731720 TCACGTTGCATTGAACAATATGG 58.268 39.130 0.00 0.00 0.00 2.74
272 273 4.457257 TCACGTTGCATTGAACAATATGGA 59.543 37.500 0.00 0.00 0.00 3.41
273 274 5.125257 TCACGTTGCATTGAACAATATGGAT 59.875 36.000 0.00 0.00 0.00 3.41
274 275 5.806502 CACGTTGCATTGAACAATATGGATT 59.193 36.000 0.00 0.00 0.00 3.01
275 276 6.310956 CACGTTGCATTGAACAATATGGATTT 59.689 34.615 0.00 0.00 0.00 2.17
276 277 6.310956 ACGTTGCATTGAACAATATGGATTTG 59.689 34.615 0.00 0.00 0.00 2.32
277 278 6.530887 CGTTGCATTGAACAATATGGATTTGA 59.469 34.615 0.00 0.00 0.00 2.69
278 279 7.253850 CGTTGCATTGAACAATATGGATTTGAG 60.254 37.037 0.00 0.00 0.00 3.02
279 280 6.575267 TGCATTGAACAATATGGATTTGAGG 58.425 36.000 0.00 0.00 0.00 3.86
280 281 6.154877 TGCATTGAACAATATGGATTTGAGGT 59.845 34.615 0.00 0.00 0.00 3.85
281 282 7.043565 GCATTGAACAATATGGATTTGAGGTT 58.956 34.615 0.00 0.00 0.00 3.50
282 283 7.223387 GCATTGAACAATATGGATTTGAGGTTC 59.777 37.037 0.00 0.00 35.27 3.62
283 284 6.773976 TGAACAATATGGATTTGAGGTTCC 57.226 37.500 0.00 0.00 34.13 3.62
284 285 6.493166 TGAACAATATGGATTTGAGGTTCCT 58.507 36.000 0.00 0.00 34.13 3.36
285 286 7.638444 TGAACAATATGGATTTGAGGTTCCTA 58.362 34.615 0.00 0.00 34.13 2.94
286 287 8.112822 TGAACAATATGGATTTGAGGTTCCTAA 58.887 33.333 0.00 0.00 34.13 2.69
287 288 9.136323 GAACAATATGGATTTGAGGTTCCTAAT 57.864 33.333 0.00 0.00 32.95 1.73
288 289 9.492730 AACAATATGGATTTGAGGTTCCTAATT 57.507 29.630 0.00 0.00 32.95 1.40
289 290 9.492730 ACAATATGGATTTGAGGTTCCTAATTT 57.507 29.630 0.00 0.00 32.95 1.82
290 291 9.754382 CAATATGGATTTGAGGTTCCTAATTTG 57.246 33.333 0.00 0.00 32.95 2.32
291 292 9.713684 AATATGGATTTGAGGTTCCTAATTTGA 57.286 29.630 0.00 0.00 32.95 2.69
292 293 7.651027 ATGGATTTGAGGTTCCTAATTTGAG 57.349 36.000 0.00 0.00 32.95 3.02
293 294 6.789268 TGGATTTGAGGTTCCTAATTTGAGA 58.211 36.000 0.00 0.00 32.95 3.27
294 295 7.413446 TGGATTTGAGGTTCCTAATTTGAGAT 58.587 34.615 0.00 0.00 32.95 2.75
295 296 7.340232 TGGATTTGAGGTTCCTAATTTGAGATG 59.660 37.037 0.00 0.00 32.95 2.90
296 297 7.340487 GGATTTGAGGTTCCTAATTTGAGATGT 59.660 37.037 0.00 0.00 0.00 3.06
297 298 7.687941 TTTGAGGTTCCTAATTTGAGATGTC 57.312 36.000 0.00 0.00 0.00 3.06
298 299 5.745227 TGAGGTTCCTAATTTGAGATGTCC 58.255 41.667 0.00 0.00 0.00 4.02
299 300 4.770795 AGGTTCCTAATTTGAGATGTCCG 58.229 43.478 0.00 0.00 0.00 4.79
300 301 4.469945 AGGTTCCTAATTTGAGATGTCCGA 59.530 41.667 0.00 0.00 0.00 4.55
301 302 5.131142 AGGTTCCTAATTTGAGATGTCCGAT 59.869 40.000 0.00 0.00 0.00 4.18
302 303 5.823045 GGTTCCTAATTTGAGATGTCCGATT 59.177 40.000 0.00 0.00 0.00 3.34
303 304 6.238484 GGTTCCTAATTTGAGATGTCCGATTG 60.238 42.308 0.00 0.00 0.00 2.67
304 305 5.989477 TCCTAATTTGAGATGTCCGATTGT 58.011 37.500 0.00 0.00 0.00 2.71
305 306 7.119709 TCCTAATTTGAGATGTCCGATTGTA 57.880 36.000 0.00 0.00 0.00 2.41
306 307 7.561251 TCCTAATTTGAGATGTCCGATTGTAA 58.439 34.615 0.00 0.00 0.00 2.41
307 308 8.044309 TCCTAATTTGAGATGTCCGATTGTAAA 58.956 33.333 0.00 0.00 0.00 2.01
308 309 8.673711 CCTAATTTGAGATGTCCGATTGTAAAA 58.326 33.333 0.00 0.00 0.00 1.52
309 310 9.490663 CTAATTTGAGATGTCCGATTGTAAAAC 57.509 33.333 0.00 0.00 0.00 2.43
310 311 5.873179 TTGAGATGTCCGATTGTAAAACC 57.127 39.130 0.00 0.00 0.00 3.27
311 312 4.900684 TGAGATGTCCGATTGTAAAACCA 58.099 39.130 0.00 0.00 0.00 3.67
312 313 5.309638 TGAGATGTCCGATTGTAAAACCAA 58.690 37.500 0.00 0.00 0.00 3.67
313 314 5.765677 TGAGATGTCCGATTGTAAAACCAAA 59.234 36.000 0.00 0.00 0.00 3.28
314 315 6.432783 TGAGATGTCCGATTGTAAAACCAAAT 59.567 34.615 0.00 0.00 0.00 2.32
315 316 7.608376 TGAGATGTCCGATTGTAAAACCAAATA 59.392 33.333 0.00 0.00 0.00 1.40
316 317 8.519799 AGATGTCCGATTGTAAAACCAAATAT 57.480 30.769 0.00 0.00 0.00 1.28
317 318 8.966868 AGATGTCCGATTGTAAAACCAAATATT 58.033 29.630 0.00 0.00 0.00 1.28
318 319 9.581099 GATGTCCGATTGTAAAACCAAATATTT 57.419 29.630 0.00 0.00 0.00 1.40
319 320 8.749841 TGTCCGATTGTAAAACCAAATATTTG 57.250 30.769 19.40 19.40 37.90 2.32
330 331 3.096489 CAAATATTTGGGATGCACCGG 57.904 47.619 18.72 0.00 40.11 5.28
331 332 2.430332 CAAATATTTGGGATGCACCGGT 59.570 45.455 18.72 0.00 40.11 5.28
332 333 1.981256 ATATTTGGGATGCACCGGTC 58.019 50.000 2.59 0.00 40.11 4.79
333 334 0.621082 TATTTGGGATGCACCGGTCA 59.379 50.000 2.59 6.66 40.11 4.02
334 335 0.680921 ATTTGGGATGCACCGGTCAG 60.681 55.000 2.59 0.00 40.11 3.51
335 336 2.063015 TTTGGGATGCACCGGTCAGT 62.063 55.000 2.59 0.00 40.11 3.41
336 337 2.436646 GGGATGCACCGGTCAGTG 60.437 66.667 2.59 0.00 40.88 3.66
337 338 2.347490 GGATGCACCGGTCAGTGT 59.653 61.111 2.59 0.00 40.04 3.55
338 339 1.741770 GGATGCACCGGTCAGTGTC 60.742 63.158 2.59 0.97 40.04 3.67
339 340 1.741770 GATGCACCGGTCAGTGTCC 60.742 63.158 2.59 0.00 40.04 4.02
340 341 3.589654 ATGCACCGGTCAGTGTCCG 62.590 63.158 20.15 20.15 46.49 4.79
342 343 3.991051 CACCGGTCAGTGTCCGCT 61.991 66.667 21.44 7.03 45.71 5.52
343 344 3.991051 ACCGGTCAGTGTCCGCTG 61.991 66.667 21.44 12.34 45.71 5.18
344 345 3.680786 CCGGTCAGTGTCCGCTGA 61.681 66.667 21.44 6.46 45.71 4.26
359 360 4.612412 TGACGCGCCCGGAAGTTT 62.612 61.111 5.73 0.00 39.22 2.66
360 361 2.432972 GACGCGCCCGGAAGTTTA 60.433 61.111 5.73 0.00 39.22 2.01
361 362 2.028733 GACGCGCCCGGAAGTTTAA 61.029 57.895 5.73 0.00 39.22 1.52
362 363 1.963190 GACGCGCCCGGAAGTTTAAG 61.963 60.000 5.73 0.00 39.22 1.85
363 364 2.746803 CGCGCCCGGAAGTTTAAGG 61.747 63.158 0.73 0.00 0.00 2.69
364 365 2.404186 GCGCCCGGAAGTTTAAGGG 61.404 63.158 0.73 6.83 46.44 3.95
365 366 1.297364 CGCCCGGAAGTTTAAGGGA 59.703 57.895 0.73 0.00 46.64 4.20
366 367 1.022982 CGCCCGGAAGTTTAAGGGAC 61.023 60.000 0.73 5.85 46.64 4.46
367 368 0.679002 GCCCGGAAGTTTAAGGGACC 60.679 60.000 0.73 0.00 46.64 4.46
368 369 0.392060 CCCGGAAGTTTAAGGGACCG 60.392 60.000 0.73 0.00 46.64 4.79
369 370 3.148340 CGGAAGTTTAAGGGACCGG 57.852 57.895 0.00 0.00 37.28 5.28
370 371 0.609662 CGGAAGTTTAAGGGACCGGA 59.390 55.000 9.46 0.00 37.28 5.14
371 372 1.208776 CGGAAGTTTAAGGGACCGGAT 59.791 52.381 9.46 0.00 37.28 4.18
372 373 2.355412 CGGAAGTTTAAGGGACCGGATT 60.355 50.000 9.46 0.00 37.28 3.01
373 374 3.693807 GGAAGTTTAAGGGACCGGATTT 58.306 45.455 9.46 0.00 0.00 2.17
374 375 3.442625 GGAAGTTTAAGGGACCGGATTTG 59.557 47.826 9.46 0.00 0.00 2.32
375 376 2.443416 AGTTTAAGGGACCGGATTTGC 58.557 47.619 9.46 0.00 0.00 3.68
376 377 1.475280 GTTTAAGGGACCGGATTTGCC 59.525 52.381 9.46 0.00 0.00 4.52
377 378 0.033894 TTAAGGGACCGGATTTGCCC 60.034 55.000 9.46 10.74 41.00 5.36
378 379 1.208844 TAAGGGACCGGATTTGCCCA 61.209 55.000 9.46 0.00 43.20 5.36
379 380 1.874299 AAGGGACCGGATTTGCCCAT 61.874 55.000 9.46 0.35 43.20 4.00
380 381 1.828224 GGGACCGGATTTGCCCATC 60.828 63.158 9.46 0.00 40.39 3.51
381 382 1.077068 GGACCGGATTTGCCCATCA 60.077 57.895 9.46 0.00 0.00 3.07
382 383 1.384222 GGACCGGATTTGCCCATCAC 61.384 60.000 9.46 0.00 0.00 3.06
383 384 1.714899 GACCGGATTTGCCCATCACG 61.715 60.000 9.46 0.00 0.00 4.35
384 385 1.748879 CCGGATTTGCCCATCACGT 60.749 57.895 0.00 0.00 0.00 4.49
385 386 1.714899 CCGGATTTGCCCATCACGTC 61.715 60.000 0.00 0.00 0.00 4.34
386 387 0.744414 CGGATTTGCCCATCACGTCT 60.744 55.000 0.00 0.00 0.00 4.18
387 388 1.472552 CGGATTTGCCCATCACGTCTA 60.473 52.381 0.00 0.00 0.00 2.59
388 389 2.806745 CGGATTTGCCCATCACGTCTAT 60.807 50.000 0.00 0.00 0.00 1.98
389 390 3.554129 CGGATTTGCCCATCACGTCTATA 60.554 47.826 0.00 0.00 0.00 1.31
390 391 3.997021 GGATTTGCCCATCACGTCTATAG 59.003 47.826 0.00 0.00 0.00 1.31
391 392 4.262463 GGATTTGCCCATCACGTCTATAGA 60.262 45.833 0.00 0.00 0.00 1.98
392 393 4.955811 TTTGCCCATCACGTCTATAGAT 57.044 40.909 5.57 0.00 0.00 1.98
393 394 3.942130 TGCCCATCACGTCTATAGATG 57.058 47.619 18.61 18.61 39.02 2.90
394 395 2.029020 TGCCCATCACGTCTATAGATGC 60.029 50.000 19.87 1.36 38.21 3.91
395 396 2.232452 GCCCATCACGTCTATAGATGCT 59.768 50.000 19.87 6.56 38.21 3.79
396 397 3.674682 GCCCATCACGTCTATAGATGCTC 60.675 52.174 19.87 0.31 38.21 4.26
397 398 3.761218 CCCATCACGTCTATAGATGCTCT 59.239 47.826 19.87 3.86 38.21 4.09
398 399 4.219507 CCCATCACGTCTATAGATGCTCTT 59.780 45.833 19.87 0.00 38.21 2.85
399 400 5.416013 CCCATCACGTCTATAGATGCTCTTA 59.584 44.000 19.87 3.90 38.21 2.10
400 401 6.318628 CCATCACGTCTATAGATGCTCTTAC 58.681 44.000 19.87 0.00 38.21 2.34
401 402 6.072452 CCATCACGTCTATAGATGCTCTTACA 60.072 42.308 19.87 0.00 38.21 2.41
402 403 7.362487 CCATCACGTCTATAGATGCTCTTACAT 60.362 40.741 19.87 0.00 38.21 2.29
403 404 8.669243 CATCACGTCTATAGATGCTCTTACATA 58.331 37.037 19.87 0.00 33.56 2.29
404 405 8.617290 TCACGTCTATAGATGCTCTTACATAA 57.383 34.615 19.87 0.00 34.50 1.90
405 406 9.232473 TCACGTCTATAGATGCTCTTACATAAT 57.768 33.333 19.87 0.00 34.50 1.28
408 409 9.639636 CGTCTATAGATGCTCTTACATAATACG 57.360 37.037 9.01 0.00 0.00 3.06
414 415 8.467402 AGATGCTCTTACATAATACGTAATGC 57.533 34.615 0.00 0.00 33.05 3.56
415 416 8.307483 AGATGCTCTTACATAATACGTAATGCT 58.693 33.333 0.00 0.00 33.33 3.79
416 417 8.833231 ATGCTCTTACATAATACGTAATGCTT 57.167 30.769 0.00 0.00 33.33 3.91
417 418 8.072238 TGCTCTTACATAATACGTAATGCTTG 57.928 34.615 0.00 0.00 33.33 4.01
418 419 7.709182 TGCTCTTACATAATACGTAATGCTTGT 59.291 33.333 0.00 2.60 33.33 3.16
419 420 8.004344 GCTCTTACATAATACGTAATGCTTGTG 58.996 37.037 0.00 0.52 31.38 3.33
420 421 8.360325 TCTTACATAATACGTAATGCTTGTGG 57.640 34.615 0.00 0.00 0.00 4.17
421 422 7.439955 TCTTACATAATACGTAATGCTTGTGGG 59.560 37.037 0.00 0.00 0.00 4.61
422 423 4.819630 ACATAATACGTAATGCTTGTGGGG 59.180 41.667 0.00 0.00 0.00 4.96
423 424 2.341846 ATACGTAATGCTTGTGGGGG 57.658 50.000 0.00 0.00 0.00 5.40
463 464 2.764637 AATGTTGGCTGACCGGGACC 62.765 60.000 6.32 1.27 39.70 4.46
494 495 2.352225 GCCACACAACACAACAACTCAA 60.352 45.455 0.00 0.00 0.00 3.02
495 496 3.500982 CCACACAACACAACAACTCAAG 58.499 45.455 0.00 0.00 0.00 3.02
497 498 2.176369 CACAACACAACAACTCAAGCG 58.824 47.619 0.00 0.00 0.00 4.68
519 582 0.912006 AAAGGACAGGAGGAGGAGGC 60.912 60.000 0.00 0.00 0.00 4.70
520 583 2.039624 GGACAGGAGGAGGAGGCA 59.960 66.667 0.00 0.00 0.00 4.75
523 599 0.980231 GACAGGAGGAGGAGGCACAT 60.980 60.000 0.00 0.00 0.00 3.21
526 602 0.252881 AGGAGGAGGAGGCACATCAA 60.253 55.000 0.00 0.00 0.00 2.57
528 604 0.463474 GAGGAGGAGGCACATCAAGC 60.463 60.000 0.00 0.00 0.00 4.01
529 605 1.817099 GGAGGAGGCACATCAAGCG 60.817 63.158 0.00 0.00 0.00 4.68
532 608 2.334946 GGAGGCACATCAAGCGCAA 61.335 57.895 11.47 0.00 0.00 4.85
542 618 1.026584 TCAAGCGCAATGATGGATGG 58.973 50.000 11.47 0.00 0.00 3.51
544 620 1.027357 AAGCGCAATGATGGATGGAC 58.973 50.000 11.47 0.00 0.00 4.02
545 621 0.820891 AGCGCAATGATGGATGGACC 60.821 55.000 11.47 0.00 39.54 4.46
548 624 2.146342 CGCAATGATGGATGGACCTAC 58.854 52.381 0.00 0.00 39.86 3.18
549 625 2.146342 GCAATGATGGATGGACCTACG 58.854 52.381 0.00 0.00 39.86 3.51
550 626 2.485479 GCAATGATGGATGGACCTACGT 60.485 50.000 0.00 0.00 39.86 3.57
551 627 3.133691 CAATGATGGATGGACCTACGTG 58.866 50.000 0.00 0.00 39.86 4.49
552 628 0.464036 TGATGGATGGACCTACGTGC 59.536 55.000 0.00 0.00 39.86 5.34
553 629 0.753262 GATGGATGGACCTACGTGCT 59.247 55.000 0.00 0.00 39.86 4.40
554 630 0.465705 ATGGATGGACCTACGTGCTG 59.534 55.000 0.00 0.00 39.86 4.41
555 631 0.902984 TGGATGGACCTACGTGCTGT 60.903 55.000 0.00 0.00 39.86 4.40
557 633 1.687123 GGATGGACCTACGTGCTGTAT 59.313 52.381 0.00 0.00 35.41 2.29
559 635 3.057456 GGATGGACCTACGTGCTGTATAG 60.057 52.174 0.00 0.00 35.41 1.31
560 636 2.304092 TGGACCTACGTGCTGTATAGG 58.696 52.381 0.00 0.00 41.21 2.57
561 637 2.092267 TGGACCTACGTGCTGTATAGGA 60.092 50.000 5.31 0.00 38.20 2.94
562 638 2.553172 GGACCTACGTGCTGTATAGGAG 59.447 54.545 5.31 0.00 38.20 3.69
563 639 2.553172 GACCTACGTGCTGTATAGGAGG 59.447 54.545 5.31 0.00 38.20 4.30
564 640 2.174210 ACCTACGTGCTGTATAGGAGGA 59.826 50.000 7.65 0.00 38.20 3.71
566 642 1.033574 ACGTGCTGTATAGGAGGAGC 58.966 55.000 7.65 0.00 34.68 4.70
567 643 1.032794 CGTGCTGTATAGGAGGAGCA 58.967 55.000 0.00 0.00 39.11 4.26
568 644 1.615883 CGTGCTGTATAGGAGGAGCAT 59.384 52.381 0.00 0.00 43.07 3.79
588 672 4.586001 GCATATGGGTGAGTCATTTTCCAT 59.414 41.667 17.94 17.94 38.40 3.41
592 676 2.450476 GGTGAGTCATTTTCCATGGCT 58.550 47.619 6.96 0.00 36.57 4.75
596 680 4.996788 GAGTCATTTTCCATGGCTCATT 57.003 40.909 6.96 0.00 46.74 2.57
598 682 5.334724 AGTCATTTTCCATGGCTCATTTC 57.665 39.130 6.96 0.00 25.32 2.17
603 687 2.488204 TCCATGGCTCATTTCGAACA 57.512 45.000 6.96 0.00 0.00 3.18
610 694 1.089920 CTCATTTCGAACAGCCCAGG 58.910 55.000 0.00 0.00 0.00 4.45
612 696 1.073125 TCATTTCGAACAGCCCAGGAA 59.927 47.619 0.00 0.00 0.00 3.36
613 697 1.470098 CATTTCGAACAGCCCAGGAAG 59.530 52.381 0.00 0.00 0.00 3.46
615 699 0.762418 TTCGAACAGCCCAGGAAGAA 59.238 50.000 0.00 0.00 0.00 2.52
616 700 0.762418 TCGAACAGCCCAGGAAGAAA 59.238 50.000 0.00 0.00 0.00 2.52
617 701 1.160137 CGAACAGCCCAGGAAGAAAG 58.840 55.000 0.00 0.00 0.00 2.62
618 702 1.270839 CGAACAGCCCAGGAAGAAAGA 60.271 52.381 0.00 0.00 0.00 2.52
619 703 2.155279 GAACAGCCCAGGAAGAAAGAC 58.845 52.381 0.00 0.00 0.00 3.01
620 704 1.140312 ACAGCCCAGGAAGAAAGACA 58.860 50.000 0.00 0.00 0.00 3.41
621 705 1.707427 ACAGCCCAGGAAGAAAGACAT 59.293 47.619 0.00 0.00 0.00 3.06
624 708 1.467920 CCCAGGAAGAAAGACATGCC 58.532 55.000 0.00 0.00 0.00 4.40
625 709 1.272092 CCCAGGAAGAAAGACATGCCA 60.272 52.381 0.00 0.00 0.00 4.92
626 710 1.815003 CCAGGAAGAAAGACATGCCAC 59.185 52.381 0.00 0.00 0.00 5.01
631 771 2.957402 AGAAAGACATGCCACCAGAA 57.043 45.000 0.00 0.00 0.00 3.02
633 773 3.152341 AGAAAGACATGCCACCAGAAAG 58.848 45.455 0.00 0.00 0.00 2.62
636 776 1.980765 AGACATGCCACCAGAAAGAGA 59.019 47.619 0.00 0.00 0.00 3.10
638 778 3.149196 GACATGCCACCAGAAAGAGAAA 58.851 45.455 0.00 0.00 0.00 2.52
659 816 4.579454 AAAAGAAAGGAAAACGGTAGGC 57.421 40.909 0.00 0.00 0.00 3.93
660 817 2.195741 AGAAAGGAAAACGGTAGGCC 57.804 50.000 0.00 0.00 0.00 5.19
661 818 1.422402 AGAAAGGAAAACGGTAGGCCA 59.578 47.619 5.01 0.00 34.09 5.36
665 822 0.535553 GGAAAACGGTAGGCCACACA 60.536 55.000 5.01 0.00 34.09 3.72
666 823 1.310904 GAAAACGGTAGGCCACACAA 58.689 50.000 5.01 0.00 34.09 3.33
669 826 1.765230 AACGGTAGGCCACACAAAAA 58.235 45.000 5.01 0.00 34.09 1.94
733 915 0.887933 CCACCCACGGGATTTCTTTG 59.112 55.000 9.72 0.00 38.96 2.77
735 917 1.960689 CACCCACGGGATTTCTTTGTT 59.039 47.619 9.72 0.00 38.96 2.83
736 918 3.150767 CACCCACGGGATTTCTTTGTTA 58.849 45.455 9.72 0.00 38.96 2.41
737 919 3.057806 CACCCACGGGATTTCTTTGTTAC 60.058 47.826 9.72 0.00 38.96 2.50
738 920 3.181437 ACCCACGGGATTTCTTTGTTACT 60.181 43.478 9.72 0.00 38.96 2.24
739 921 3.439129 CCCACGGGATTTCTTTGTTACTC 59.561 47.826 0.00 0.00 37.50 2.59
740 922 3.439129 CCACGGGATTTCTTTGTTACTCC 59.561 47.826 0.00 0.00 0.00 3.85
741 923 3.439129 CACGGGATTTCTTTGTTACTCCC 59.561 47.826 0.00 0.00 39.19 4.30
742 924 3.329814 ACGGGATTTCTTTGTTACTCCCT 59.670 43.478 4.09 0.00 40.20 4.20
743 925 4.202535 ACGGGATTTCTTTGTTACTCCCTT 60.203 41.667 4.09 0.00 40.20 3.95
744 926 4.395231 CGGGATTTCTTTGTTACTCCCTTC 59.605 45.833 4.09 0.00 40.20 3.46
745 927 4.395231 GGGATTTCTTTGTTACTCCCTTCG 59.605 45.833 0.00 0.00 39.42 3.79
746 928 5.001874 GGATTTCTTTGTTACTCCCTTCGT 58.998 41.667 0.00 0.00 0.00 3.85
747 929 5.121925 GGATTTCTTTGTTACTCCCTTCGTC 59.878 44.000 0.00 0.00 0.00 4.20
748 930 3.672767 TCTTTGTTACTCCCTTCGTCC 57.327 47.619 0.00 0.00 0.00 4.79
749 931 2.029649 TCTTTGTTACTCCCTTCGTCCG 60.030 50.000 0.00 0.00 0.00 4.79
750 932 0.604578 TTGTTACTCCCTTCGTCCGG 59.395 55.000 0.00 0.00 0.00 5.14
751 933 0.251297 TGTTACTCCCTTCGTCCGGA 60.251 55.000 0.00 0.00 0.00 5.14
752 934 0.890683 GTTACTCCCTTCGTCCGGAA 59.109 55.000 5.23 0.00 0.00 4.30
753 935 1.273327 GTTACTCCCTTCGTCCGGAAA 59.727 52.381 5.23 0.00 33.34 3.13
754 936 1.856629 TACTCCCTTCGTCCGGAAAT 58.143 50.000 5.23 0.00 33.34 2.17
755 937 1.856629 ACTCCCTTCGTCCGGAAATA 58.143 50.000 5.23 0.00 33.34 1.40
756 938 1.479730 ACTCCCTTCGTCCGGAAATAC 59.520 52.381 5.23 0.00 33.34 1.89
757 939 1.755380 CTCCCTTCGTCCGGAAATACT 59.245 52.381 5.23 0.00 33.34 2.12
758 940 2.167900 CTCCCTTCGTCCGGAAATACTT 59.832 50.000 5.23 0.00 33.34 2.24
759 941 3.364549 TCCCTTCGTCCGGAAATACTTA 58.635 45.455 5.23 0.00 33.34 2.24
760 942 3.962718 TCCCTTCGTCCGGAAATACTTAT 59.037 43.478 5.23 0.00 33.34 1.73
761 943 4.038402 TCCCTTCGTCCGGAAATACTTATC 59.962 45.833 5.23 0.00 33.34 1.75
762 944 3.979495 CCTTCGTCCGGAAATACTTATCG 59.021 47.826 5.23 1.58 33.34 2.92
763 945 4.261322 CCTTCGTCCGGAAATACTTATCGA 60.261 45.833 5.23 4.55 33.34 3.59
764 946 4.898829 TCGTCCGGAAATACTTATCGAA 57.101 40.909 5.23 0.00 0.00 3.71
765 947 5.247507 TCGTCCGGAAATACTTATCGAAA 57.752 39.130 5.23 0.00 0.00 3.46
766 948 5.649557 TCGTCCGGAAATACTTATCGAAAA 58.350 37.500 5.23 0.00 0.00 2.29
767 949 6.098679 TCGTCCGGAAATACTTATCGAAAAA 58.901 36.000 5.23 0.00 0.00 1.94
795 977 9.851686 TGCATAAAAATGGATGTATCTAGAACT 57.148 29.630 0.00 0.00 0.00 3.01
822 1004 7.776618 AATACGTCTAGATACATCCATTCCA 57.223 36.000 0.00 0.00 0.00 3.53
823 1005 7.962995 ATACGTCTAGATACATCCATTCCAT 57.037 36.000 0.00 0.00 0.00 3.41
824 1006 6.274157 ACGTCTAGATACATCCATTCCATC 57.726 41.667 0.00 0.00 0.00 3.51
825 1007 5.106118 ACGTCTAGATACATCCATTCCATCG 60.106 44.000 0.00 0.00 0.00 3.84
826 1008 5.123979 CGTCTAGATACATCCATTCCATCGA 59.876 44.000 0.00 0.00 0.00 3.59
827 1009 6.326375 GTCTAGATACATCCATTCCATCGAC 58.674 44.000 0.00 0.00 0.00 4.20
828 1010 6.010219 TCTAGATACATCCATTCCATCGACA 58.990 40.000 0.00 0.00 0.00 4.35
829 1011 5.551305 AGATACATCCATTCCATCGACAA 57.449 39.130 0.00 0.00 0.00 3.18
830 1012 5.545588 AGATACATCCATTCCATCGACAAG 58.454 41.667 0.00 0.00 0.00 3.16
831 1013 3.634397 ACATCCATTCCATCGACAAGT 57.366 42.857 0.00 0.00 0.00 3.16
832 1014 4.753516 ACATCCATTCCATCGACAAGTA 57.246 40.909 0.00 0.00 0.00 2.24
833 1015 5.296151 ACATCCATTCCATCGACAAGTAT 57.704 39.130 0.00 0.00 0.00 2.12
834 1016 5.684704 ACATCCATTCCATCGACAAGTATT 58.315 37.500 0.00 0.00 0.00 1.89
835 1017 6.122277 ACATCCATTCCATCGACAAGTATTT 58.878 36.000 0.00 0.00 0.00 1.40
836 1018 6.260936 ACATCCATTCCATCGACAAGTATTTC 59.739 38.462 0.00 0.00 0.00 2.17
837 1019 5.989477 TCCATTCCATCGACAAGTATTTCT 58.011 37.500 0.00 0.00 0.00 2.52
838 1020 5.817296 TCCATTCCATCGACAAGTATTTCTG 59.183 40.000 0.00 0.00 0.00 3.02
839 1021 5.008019 CCATTCCATCGACAAGTATTTCTGG 59.992 44.000 0.00 0.00 0.00 3.86
840 1022 5.414789 TTCCATCGACAAGTATTTCTGGA 57.585 39.130 0.00 0.00 0.00 3.86
841 1023 4.755411 TCCATCGACAAGTATTTCTGGAC 58.245 43.478 0.00 0.00 0.00 4.02
842 1024 3.551890 CCATCGACAAGTATTTCTGGACG 59.448 47.826 0.00 0.00 36.80 4.79
843 1025 3.226346 TCGACAAGTATTTCTGGACGG 57.774 47.619 0.00 0.00 36.30 4.79
844 1026 2.821378 TCGACAAGTATTTCTGGACGGA 59.179 45.455 0.00 0.00 36.30 4.69
845 1027 3.119602 TCGACAAGTATTTCTGGACGGAG 60.120 47.826 0.00 0.00 36.30 4.63
846 1028 3.522553 GACAAGTATTTCTGGACGGAGG 58.477 50.000 0.00 0.00 0.00 4.30
847 1029 3.170717 ACAAGTATTTCTGGACGGAGGA 58.829 45.455 0.00 0.00 0.00 3.71
848 1030 3.581332 ACAAGTATTTCTGGACGGAGGAA 59.419 43.478 0.00 0.00 0.00 3.36
849 1031 4.184629 CAAGTATTTCTGGACGGAGGAAG 58.815 47.826 0.00 0.00 0.00 3.46
850 1032 3.442076 AGTATTTCTGGACGGAGGAAGT 58.558 45.455 0.00 0.00 0.00 3.01
851 1033 4.607239 AGTATTTCTGGACGGAGGAAGTA 58.393 43.478 0.00 0.00 0.00 2.24
856 1038 4.903045 TCTGGACGGAGGAAGTATTTTT 57.097 40.909 0.00 0.00 0.00 1.94
891 1073 1.229529 ACCCCACCTCACCTACCTG 60.230 63.158 0.00 0.00 0.00 4.00
893 1075 1.918293 CCCACCTCACCTACCTGCA 60.918 63.158 0.00 0.00 0.00 4.41
897 1079 1.204941 CACCTCACCTACCTGCAGTAC 59.795 57.143 13.81 0.00 0.00 2.73
898 1080 1.077334 ACCTCACCTACCTGCAGTACT 59.923 52.381 13.81 0.00 0.00 2.73
899 1081 2.180276 CCTCACCTACCTGCAGTACTT 58.820 52.381 13.81 0.00 0.00 2.24
900 1082 2.093973 CCTCACCTACCTGCAGTACTTG 60.094 54.545 13.81 3.22 0.00 3.16
914 1096 1.461127 GTACTTGCTCAGTTGAAGCCG 59.539 52.381 0.00 0.00 36.88 5.52
915 1097 0.106708 ACTTGCTCAGTTGAAGCCGA 59.893 50.000 0.00 0.00 27.32 5.54
971 1153 1.064946 CTAGCTAGACTTGCGCGCT 59.935 57.895 33.29 12.78 35.28 5.92
1078 1290 2.740981 TGCAAACTGCCAAGTGTTTTTG 59.259 40.909 0.00 0.00 44.23 2.44
1079 1291 2.999355 GCAAACTGCCAAGTGTTTTTGA 59.001 40.909 0.00 0.00 37.42 2.69
1080 1292 3.181521 GCAAACTGCCAAGTGTTTTTGAC 60.182 43.478 0.00 0.00 37.42 3.18
1081 1293 3.951775 AACTGCCAAGTGTTTTTGACA 57.048 38.095 0.00 0.00 36.51 3.58
1104 1317 5.129485 CACGGGCTTATATATTGGATCCTCT 59.871 44.000 14.23 2.43 0.00 3.69
1105 1318 5.129485 ACGGGCTTATATATTGGATCCTCTG 59.871 44.000 14.23 0.00 0.00 3.35
1118 1336 2.820479 CTCTGCTCTGCTGCTGCC 60.820 66.667 13.47 0.00 38.71 4.85
1170 1388 1.523095 GTCTTCACAGCGTGAGTTCAC 59.477 52.381 10.44 2.16 43.69 3.18
1182 1400 3.253188 CGTGAGTTCACCATCCATTGTTT 59.747 43.478 6.68 0.00 43.66 2.83
1192 1410 4.040706 ACCATCCATTGTTTGATTGCTTGT 59.959 37.500 0.00 0.00 0.00 3.16
1217 1435 7.221067 GTCCAGTTCATTAGCTATATATGCGAC 59.779 40.741 0.00 0.00 35.28 5.19
1253 1471 4.651503 TCCTGATTAATGTGTCCTCCTCTC 59.348 45.833 0.00 0.00 0.00 3.20
1304 1525 1.067142 TGCGTGTATCTTCTCCACCAC 60.067 52.381 0.00 0.00 0.00 4.16
1333 1554 7.928873 TCTCTTCCAAATCCTGGTAATTAAGT 58.071 34.615 0.00 0.00 46.51 2.24
1334 1555 8.390921 TCTCTTCCAAATCCTGGTAATTAAGTT 58.609 33.333 0.00 0.00 46.51 2.66
1335 1556 9.681062 CTCTTCCAAATCCTGGTAATTAAGTTA 57.319 33.333 0.00 0.00 46.51 2.24
1338 1559 8.288689 TCCAAATCCTGGTAATTAAGTTAAGC 57.711 34.615 1.21 0.00 46.51 3.09
1339 1560 7.340999 TCCAAATCCTGGTAATTAAGTTAAGCC 59.659 37.037 1.21 4.50 46.51 4.35
1341 1562 8.695456 CAAATCCTGGTAATTAAGTTAAGCCAT 58.305 33.333 13.38 1.85 0.00 4.40
1342 1563 8.465273 AATCCTGGTAATTAAGTTAAGCCATC 57.535 34.615 13.38 0.00 0.00 3.51
1343 1564 6.362248 TCCTGGTAATTAAGTTAAGCCATCC 58.638 40.000 13.38 7.20 0.00 3.51
1344 1565 6.069323 TCCTGGTAATTAAGTTAAGCCATCCA 60.069 38.462 13.38 10.18 0.00 3.41
1346 1567 7.255590 CCTGGTAATTAAGTTAAGCCATCCATG 60.256 40.741 13.38 0.00 0.00 3.66
1377 1600 4.040461 ACTCACTTGCCTCTAAACTAAGCA 59.960 41.667 0.00 0.00 0.00 3.91
1389 1614 7.437862 CCTCTAAACTAAGCAGCATTTCTCTAG 59.562 40.741 0.00 0.00 0.00 2.43
1400 1625 5.233902 CAGCATTTCTCTAGGAACTGAATCG 59.766 44.000 12.41 0.00 41.52 3.34
1460 1687 7.815068 ACAGTGCTAGTCATTTGTTCTAGTTAG 59.185 37.037 0.00 0.00 35.14 2.34
1461 1688 7.815068 CAGTGCTAGTCATTTGTTCTAGTTAGT 59.185 37.037 0.00 0.00 35.14 2.24
1488 1715 2.119495 ACACTCTGTTTCACTCACCCT 58.881 47.619 0.00 0.00 0.00 4.34
1502 1729 2.227388 CTCACCCTCTGTTTGCAATGTC 59.773 50.000 0.00 0.00 0.00 3.06
1532 1759 6.814146 CACTCTCTGTTCCTATTTGTTCTACC 59.186 42.308 0.00 0.00 0.00 3.18
1551 1800 6.464222 TCTACCACAAATTAGGTCAACTGAG 58.536 40.000 0.87 0.00 39.31 3.35
1556 1805 6.655003 CCACAAATTAGGTCAACTGAGTACAT 59.345 38.462 0.00 0.00 0.00 2.29
1557 1806 7.822334 CCACAAATTAGGTCAACTGAGTACATA 59.178 37.037 0.00 0.00 0.00 2.29
1558 1807 8.656849 CACAAATTAGGTCAACTGAGTACATAC 58.343 37.037 0.00 0.00 0.00 2.39
1559 1808 8.372459 ACAAATTAGGTCAACTGAGTACATACA 58.628 33.333 0.00 0.00 0.00 2.29
1560 1809 9.383519 CAAATTAGGTCAACTGAGTACATACAT 57.616 33.333 0.00 0.00 0.00 2.29
1561 1810 9.959721 AAATTAGGTCAACTGAGTACATACATT 57.040 29.630 0.00 0.00 0.00 2.71
1562 1811 9.959721 AATTAGGTCAACTGAGTACATACATTT 57.040 29.630 0.00 0.00 0.00 2.32
1563 1812 9.959721 ATTAGGTCAACTGAGTACATACATTTT 57.040 29.630 0.00 0.00 0.00 1.82
1566 1815 9.959721 AGGTCAACTGAGTACATACATTTTATT 57.040 29.630 0.00 0.00 0.00 1.40
1702 1973 4.080863 CACTTGGGAGTACCTTGAGCTTAT 60.081 45.833 0.00 0.00 41.11 1.73
1788 2059 3.130633 GTTACGGCTGATGCACATCATA 58.869 45.455 13.42 1.25 45.74 2.15
1846 2565 0.674581 TTACGAAGCGGGAGAGACGA 60.675 55.000 0.00 0.00 0.00 4.20
1847 2566 1.364626 TACGAAGCGGGAGAGACGAC 61.365 60.000 0.00 0.00 0.00 4.34
1848 2567 2.100603 GAAGCGGGAGAGACGACG 59.899 66.667 0.00 0.00 0.00 5.12
1878 2598 0.740868 GCCTGTTCTATGCGCACTGA 60.741 55.000 14.90 11.66 0.00 3.41
1931 2659 2.327940 GCGTGTTTGCTTGAGCGT 59.672 55.556 0.00 0.00 45.83 5.07
1933 2661 1.641140 CGTGTTTGCTTGAGCGTCA 59.359 52.632 0.00 0.00 45.83 4.35
1961 2689 2.751436 TGGGCAGAAGATTGGCGC 60.751 61.111 0.00 0.00 43.96 6.53
2149 2886 4.848299 GCGAAGACAATTTCTGAACACATC 59.152 41.667 0.00 0.00 33.46 3.06
2206 2943 4.093556 CACTATTTTCCTCTGTTCTTCGCC 59.906 45.833 0.00 0.00 0.00 5.54
2393 3159 4.333649 CGCTTGATTGTGATCCAACTATGT 59.666 41.667 0.00 0.00 35.44 2.29
2525 3310 1.078848 AAGAGGTGACCATGAGCGC 60.079 57.895 3.63 0.00 0.00 5.92
2710 3501 7.854557 GGGTACCGTAAAAGTTCTCATTATT 57.145 36.000 5.65 0.00 40.86 1.40
2711 3502 8.272545 GGGTACCGTAAAAGTTCTCATTATTT 57.727 34.615 5.65 0.00 40.86 1.40
2712 3503 8.733458 GGGTACCGTAAAAGTTCTCATTATTTT 58.267 33.333 5.65 0.00 40.86 1.82
2744 3535 4.413495 TGTAACTATTGCTTGAAACCGC 57.587 40.909 0.00 0.00 0.00 5.68
2767 3558 6.857964 CGCTGTGATTCAAATGTCTAGTTTTT 59.142 34.615 0.00 0.00 0.00 1.94
2768 3559 7.149080 CGCTGTGATTCAAATGTCTAGTTTTTG 60.149 37.037 7.85 7.85 0.00 2.44
2778 3569 9.612620 CAAATGTCTAGTTTTTGAACTATGGTC 57.387 33.333 8.25 0.00 35.00 4.02
2790 3581 5.168569 TGAACTATGGTCTAAAGCTGTTCG 58.831 41.667 0.00 0.00 34.42 3.95
2808 3599 9.325198 AGCTGTTCGTGTATCATTTTATCAATA 57.675 29.630 0.00 0.00 0.00 1.90
2930 3721 3.420893 TCAGAGAATTCAACCCGCAATT 58.579 40.909 8.44 0.00 0.00 2.32
2997 3790 4.223659 ACGTCACTGTGTTTTGTTGAAAC 58.776 39.130 7.79 0.00 46.28 2.78
3052 3845 7.323177 CCGAACCGTTATTTTACATTTTTCGAA 59.677 33.333 0.00 0.00 35.33 3.71
3056 3850 9.518906 ACCGTTATTTTACATTTTTCGAAAACT 57.481 25.926 22.41 14.85 0.00 2.66
3093 3887 4.020573 AGGTAATTCATCCGCGGATCATAA 60.021 41.667 37.10 28.48 31.62 1.90
3455 4253 1.501169 CGTTTTCCTTTCGTACCGGT 58.499 50.000 13.98 13.98 0.00 5.28
3536 4336 6.713450 TCGATAACTACACATGCATACCTCTA 59.287 38.462 0.00 0.00 0.00 2.43
3573 4373 6.432472 AGAGGAAAACAACAGATTTCTCATCC 59.568 38.462 0.00 0.00 36.15 3.51
4065 4865 5.657826 TTCAAACATGAGAGAGAGAGAGG 57.342 43.478 0.00 0.00 0.00 3.69
4089 4889 3.369388 GGGAGGGAGGGAGGGAGT 61.369 72.222 0.00 0.00 0.00 3.85
4094 4894 2.041405 GGAGGGAGGGAGTGGGAG 60.041 72.222 0.00 0.00 0.00 4.30
4098 4898 2.041405 GGAGGGAGTGGGAGGAGG 60.041 72.222 0.00 0.00 0.00 4.30
4109 4909 1.595058 GGGAGGAGGGAGGGAGAGAA 61.595 65.000 0.00 0.00 0.00 2.87
4171 4971 1.740585 TGTTTTGTGTGAACACCGAGG 59.259 47.619 10.92 0.00 45.88 4.63
4172 4972 1.741145 GTTTTGTGTGAACACCGAGGT 59.259 47.619 10.92 0.00 45.88 3.85
4212 5012 0.839946 AGGAGGATAAGCGGCAACAT 59.160 50.000 1.45 0.00 0.00 2.71
4277 5077 0.960364 CTCGGGTGATGGTTGTTGGG 60.960 60.000 0.00 0.00 0.00 4.12
4304 5104 7.865706 AAGAGTGTGTGTTATGTTTTCTCTT 57.134 32.000 0.00 0.00 35.72 2.85
4336 5136 3.365220 CGCACAGACTCTTTTGCTAGTAC 59.635 47.826 7.51 0.00 32.56 2.73
4362 5162 6.753913 ATAATCTTGTAATCTCTCCCAGCA 57.246 37.500 0.00 0.00 0.00 4.41
4363 5163 3.895232 TCTTGTAATCTCTCCCAGCAC 57.105 47.619 0.00 0.00 0.00 4.40
4365 5165 1.204146 TGTAATCTCTCCCAGCACCC 58.796 55.000 0.00 0.00 0.00 4.61
4366 5166 1.204146 GTAATCTCTCCCAGCACCCA 58.796 55.000 0.00 0.00 0.00 4.51
4367 5167 1.139853 GTAATCTCTCCCAGCACCCAG 59.860 57.143 0.00 0.00 0.00 4.45
4368 5168 1.919600 AATCTCTCCCAGCACCCAGC 61.920 60.000 0.00 0.00 46.19 4.85
4378 5178 4.489771 CACCCAGCCCATCCCGAC 62.490 72.222 0.00 0.00 0.00 4.79
4382 5182 4.489771 CAGCCCATCCCGACCCAC 62.490 72.222 0.00 0.00 0.00 4.61
4384 5184 4.489771 GCCCATCCCGACCCACAG 62.490 72.222 0.00 0.00 0.00 3.66
4385 5185 4.489771 CCCATCCCGACCCACAGC 62.490 72.222 0.00 0.00 0.00 4.40
4386 5186 4.838152 CCATCCCGACCCACAGCG 62.838 72.222 0.00 0.00 0.00 5.18
4412 5212 3.827898 CGTCCCTCGCCTCACCTC 61.828 72.222 0.00 0.00 0.00 3.85
4434 5234 3.126000 CGCCTCTTTCTTCTCACCAAATC 59.874 47.826 0.00 0.00 0.00 2.17
4456 5256 2.690840 GGGCCTCCCTAATACTTGAGA 58.309 52.381 0.84 0.00 41.34 3.27
4459 5263 4.263112 GGGCCTCCCTAATACTTGAGATTC 60.263 50.000 0.84 0.00 41.34 2.52
4464 5268 4.960469 TCCCTAATACTTGAGATTCCGTGT 59.040 41.667 0.00 0.00 0.00 4.49
4579 5396 0.043334 AGGACAGGACTGCCTACCAT 59.957 55.000 11.78 0.00 44.80 3.55
4663 5490 5.998363 TCCTTTTTAAGCTTCCTCTCTGTTC 59.002 40.000 0.00 0.00 0.00 3.18
4677 5504 3.142174 CTCTGTTCAGTTTTCTGGGTCC 58.858 50.000 0.00 0.00 46.94 4.46
4681 5508 3.971305 TGTTCAGTTTTCTGGGTCCTCTA 59.029 43.478 0.00 0.00 46.94 2.43
4697 5524 6.040504 GGGTCCTCTATTGACTTTTGTTTGTT 59.959 38.462 0.00 0.00 33.22 2.83
4709 5536 7.384660 TGACTTTTGTTTGTTGCCAATCATATC 59.615 33.333 0.00 0.00 32.00 1.63
4732 5638 2.636893 ACTCTCTGATTTGGTGTGCTCT 59.363 45.455 0.00 0.00 0.00 4.09
4737 5643 1.948834 TGATTTGGTGTGCTCTGTGTG 59.051 47.619 0.00 0.00 0.00 3.82
4948 6198 5.011023 TGAAGGAGGCTTCAAGAATTTTTCC 59.989 40.000 0.00 0.00 40.00 3.13
4949 6199 4.745351 AGGAGGCTTCAAGAATTTTTCCT 58.255 39.130 0.00 0.00 0.00 3.36
4950 6200 4.525874 AGGAGGCTTCAAGAATTTTTCCTG 59.474 41.667 0.00 0.00 31.66 3.86
5046 6302 1.006227 GGGGAGGGAAAGGAGGGAT 59.994 63.158 0.00 0.00 0.00 3.85
5120 6381 2.900546 GTGGAGGATCGAACCATAGGAT 59.099 50.000 14.80 0.00 36.09 3.24
5154 6416 1.305201 GCACGGGAGAAAACAAGACA 58.695 50.000 0.00 0.00 0.00 3.41
5360 6685 6.207417 TCTCATTGACATTCCCTCACTTTTTC 59.793 38.462 0.00 0.00 0.00 2.29
5361 6686 5.243730 TCATTGACATTCCCTCACTTTTTCC 59.756 40.000 0.00 0.00 0.00 3.13
5364 6689 3.412386 ACATTCCCTCACTTTTTCCTCG 58.588 45.455 0.00 0.00 0.00 4.63
5482 6814 3.128242 AGAGAGGAAATTGCAGCATTTCG 59.872 43.478 14.64 0.00 37.58 3.46
5588 6924 3.117888 GCTCCTTCAATCCCAATACCTCA 60.118 47.826 0.00 0.00 0.00 3.86
5615 6954 0.034863 TAGTTTGGGGCCATTCGGTC 60.035 55.000 4.39 0.00 35.48 4.79
5835 7174 2.397044 AAGGGAATGGACCAAAGCAA 57.603 45.000 0.00 0.00 0.00 3.91
6101 7455 2.093341 GCCGGGAAGTAACAATGGACTA 60.093 50.000 2.18 0.00 0.00 2.59
6161 7515 5.221884 TGTCCTCAAAATGGGCATGAATTTT 60.222 36.000 0.00 2.72 36.63 1.82
6176 7533 6.611381 CATGAATTTTGGTGAAGACGTGTAT 58.389 36.000 0.00 0.00 0.00 2.29
6409 7772 8.982091 AGAAAATCTACCCTTAATTAAGCTCC 57.018 34.615 18.18 0.67 32.02 4.70
6505 7919 4.825085 ACAATTTGGTTAGACAACGATGGT 59.175 37.500 0.78 0.00 35.34 3.55
6572 7986 7.656412 TCGAAGAAATGAAATCAACCATCAAA 58.344 30.769 0.00 0.00 0.00 2.69
6633 8049 4.546570 GGAATTGACACTTTGCAGGTAAC 58.453 43.478 0.00 0.00 0.00 2.50
6734 8165 6.826741 TGCAGGGTCTTCCTATAATTGTTAAC 59.173 38.462 0.00 0.00 46.12 2.01
6762 8248 3.799281 ATGGAGGTGTTTTGTGTGTTG 57.201 42.857 0.00 0.00 0.00 3.33
6892 8384 2.357637 CTGGCTTTTTGACACCGAGAAA 59.642 45.455 0.00 0.00 0.00 2.52
6900 8392 1.234821 GACACCGAGAAACATTGCCA 58.765 50.000 0.00 0.00 0.00 4.92
6927 8419 0.029834 GATGCATCGGTTCATGGTGC 59.970 55.000 11.68 0.00 36.39 5.01
7071 8608 6.768381 AGAAGGTTAGTTCTCTTTTCCACAAG 59.232 38.462 0.00 0.00 30.55 3.16
7075 8614 2.952310 AGTTCTCTTTTCCACAAGTGCC 59.048 45.455 0.00 0.00 0.00 5.01
7455 9116 1.610102 GCAACTGTCAGAGTGCCTCAT 60.610 52.381 17.34 0.00 34.02 2.90
7478 9139 1.452833 GGGCTTGGAGCATGAGGAC 60.453 63.158 0.00 0.00 44.75 3.85
7582 9243 6.985645 TGTTGATTTCAATATTTAGCATGGGC 59.014 34.615 0.00 0.00 38.24 5.36
7637 9298 3.206150 AGCTATGATGTAAGTTTGCCGG 58.794 45.455 0.00 0.00 0.00 6.13
7725 9388 7.479070 CAGAATGTACGTTTTTAATCACTGC 57.521 36.000 0.98 0.00 0.00 4.40
7944 9625 2.735126 GCCCAATGAACAGTAAATGCGG 60.735 50.000 0.00 0.00 0.00 5.69
8177 9896 0.589729 CGGAAGGCGCGATCAAAATG 60.590 55.000 12.10 0.00 0.00 2.32
8272 10166 5.607119 AAATTCGCGTTTACTGTTCATCT 57.393 34.783 5.77 0.00 0.00 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 1.710013 GTGACGTCCACCACTATGTG 58.290 55.000 14.12 0.00 39.86 3.21
22 23 4.436998 CTGGGACGAGCCGGTGAC 62.437 72.222 1.90 0.00 37.63 3.67
41 42 5.597806 ACGTCATATTGTTGATGGATACGT 58.402 37.500 0.00 0.00 37.02 3.57
42 43 5.118664 GGACGTCATATTGTTGATGGATACG 59.881 44.000 18.91 0.00 37.02 3.06
43 44 5.989168 TGGACGTCATATTGTTGATGGATAC 59.011 40.000 18.91 0.00 37.02 2.24
44 45 5.989168 GTGGACGTCATATTGTTGATGGATA 59.011 40.000 18.91 0.00 37.02 2.59
45 46 4.816385 GTGGACGTCATATTGTTGATGGAT 59.184 41.667 18.91 0.00 37.02 3.41
46 47 4.188462 GTGGACGTCATATTGTTGATGGA 58.812 43.478 18.91 0.00 37.02 3.41
47 48 3.312421 GGTGGACGTCATATTGTTGATGG 59.688 47.826 18.91 0.00 37.02 3.51
48 49 3.001228 CGGTGGACGTCATATTGTTGATG 59.999 47.826 18.91 0.00 38.37 3.07
49 50 3.118920 TCGGTGGACGTCATATTGTTGAT 60.119 43.478 18.91 0.00 44.69 2.57
50 51 2.231721 TCGGTGGACGTCATATTGTTGA 59.768 45.455 18.91 0.89 44.69 3.18
51 52 2.347452 GTCGGTGGACGTCATATTGTTG 59.653 50.000 18.91 0.00 44.69 3.33
52 53 2.028839 TGTCGGTGGACGTCATATTGTT 60.029 45.455 18.91 0.00 46.49 2.83
53 54 1.546923 TGTCGGTGGACGTCATATTGT 59.453 47.619 18.91 0.00 46.49 2.71
54 55 1.924524 GTGTCGGTGGACGTCATATTG 59.075 52.381 18.91 2.80 46.49 1.90
55 56 1.134907 GGTGTCGGTGGACGTCATATT 60.135 52.381 18.91 0.00 46.49 1.28
56 57 0.458669 GGTGTCGGTGGACGTCATAT 59.541 55.000 18.91 0.00 46.49 1.78
57 58 1.885157 GGTGTCGGTGGACGTCATA 59.115 57.895 18.91 2.38 46.49 2.15
58 59 2.654877 GGTGTCGGTGGACGTCAT 59.345 61.111 18.91 0.00 46.49 3.06
59 60 3.968568 CGGTGTCGGTGGACGTCA 61.969 66.667 18.91 0.27 46.49 4.35
60 61 3.489277 AACGGTGTCGGTGGACGTC 62.489 63.158 7.13 7.13 46.49 4.34
61 62 3.489277 GAACGGTGTCGGTGGACGT 62.489 63.158 0.00 0.00 46.49 4.34
62 63 2.732094 GAACGGTGTCGGTGGACG 60.732 66.667 0.00 0.00 46.49 4.79
63 64 2.732094 CGAACGGTGTCGGTGGAC 60.732 66.667 5.27 0.00 43.71 4.02
75 76 1.153958 GGAGTCCGTAACCCGAACG 60.154 63.158 0.00 0.00 39.56 3.95
76 77 1.153958 CGGAGTCCGTAACCCGAAC 60.154 63.158 23.83 0.00 42.73 3.95
77 78 3.277133 CGGAGTCCGTAACCCGAA 58.723 61.111 23.83 0.00 42.73 4.30
87 88 1.995646 GCTCTTCCTCGTCGGAGTCC 61.996 65.000 0.00 0.00 44.28 3.85
88 89 1.306642 TGCTCTTCCTCGTCGGAGTC 61.307 60.000 0.00 0.00 44.28 3.36
89 90 0.894184 TTGCTCTTCCTCGTCGGAGT 60.894 55.000 0.00 0.00 44.28 3.85
90 91 0.179150 CTTGCTCTTCCTCGTCGGAG 60.179 60.000 0.00 0.00 44.28 4.63
91 92 1.595993 CCTTGCTCTTCCTCGTCGGA 61.596 60.000 0.00 0.00 41.06 4.55
92 93 1.153745 CCTTGCTCTTCCTCGTCGG 60.154 63.158 0.00 0.00 0.00 4.79
93 94 1.807573 GCCTTGCTCTTCCTCGTCG 60.808 63.158 0.00 0.00 0.00 5.12
94 95 0.107945 ATGCCTTGCTCTTCCTCGTC 60.108 55.000 0.00 0.00 0.00 4.20
95 96 0.392193 CATGCCTTGCTCTTCCTCGT 60.392 55.000 0.00 0.00 0.00 4.18
96 97 1.094073 CCATGCCTTGCTCTTCCTCG 61.094 60.000 0.00 0.00 0.00 4.63
97 98 0.750911 CCCATGCCTTGCTCTTCCTC 60.751 60.000 0.00 0.00 0.00 3.71
98 99 1.210204 TCCCATGCCTTGCTCTTCCT 61.210 55.000 0.00 0.00 0.00 3.36
99 100 0.750911 CTCCCATGCCTTGCTCTTCC 60.751 60.000 0.00 0.00 0.00 3.46
100 101 0.254178 TCTCCCATGCCTTGCTCTTC 59.746 55.000 0.00 0.00 0.00 2.87
101 102 0.700564 TTCTCCCATGCCTTGCTCTT 59.299 50.000 0.00 0.00 0.00 2.85
102 103 0.255318 CTTCTCCCATGCCTTGCTCT 59.745 55.000 0.00 0.00 0.00 4.09
103 104 0.750911 CCTTCTCCCATGCCTTGCTC 60.751 60.000 0.00 0.00 0.00 4.26
104 105 1.305623 CCTTCTCCCATGCCTTGCT 59.694 57.895 0.00 0.00 0.00 3.91
105 106 2.421399 GCCTTCTCCCATGCCTTGC 61.421 63.158 0.00 0.00 0.00 4.01
106 107 2.117156 CGCCTTCTCCCATGCCTTG 61.117 63.158 0.00 0.00 0.00 3.61
107 108 2.273449 CGCCTTCTCCCATGCCTT 59.727 61.111 0.00 0.00 0.00 4.35
108 109 3.801997 CCGCCTTCTCCCATGCCT 61.802 66.667 0.00 0.00 0.00 4.75
109 110 4.115199 ACCGCCTTCTCCCATGCC 62.115 66.667 0.00 0.00 0.00 4.40
110 111 2.825836 CACCGCCTTCTCCCATGC 60.826 66.667 0.00 0.00 0.00 4.06
111 112 2.825836 GCACCGCCTTCTCCCATG 60.826 66.667 0.00 0.00 0.00 3.66
112 113 4.115199 GGCACCGCCTTCTCCCAT 62.115 66.667 0.00 0.00 46.69 4.00
122 123 3.508840 CGGGATTGAAGGCACCGC 61.509 66.667 0.00 0.00 37.93 5.68
124 125 1.002624 TCACGGGATTGAAGGCACC 60.003 57.895 0.00 0.00 0.00 5.01
125 126 1.648467 GCTCACGGGATTGAAGGCAC 61.648 60.000 0.00 0.00 0.00 5.01
126 127 1.377202 GCTCACGGGATTGAAGGCA 60.377 57.895 0.00 0.00 0.00 4.75
127 128 2.115291 GGCTCACGGGATTGAAGGC 61.115 63.158 0.00 0.00 0.00 4.35
128 129 1.815421 CGGCTCACGGGATTGAAGG 60.815 63.158 0.00 0.00 39.42 3.46
129 130 1.084370 GTCGGCTCACGGGATTGAAG 61.084 60.000 0.00 0.00 44.45 3.02
130 131 1.079405 GTCGGCTCACGGGATTGAA 60.079 57.895 0.00 0.00 44.45 2.69
131 132 1.945354 GAGTCGGCTCACGGGATTGA 61.945 60.000 13.26 0.00 44.45 2.57
132 133 1.519455 GAGTCGGCTCACGGGATTG 60.519 63.158 13.26 0.00 44.45 2.67
133 134 2.893398 GAGTCGGCTCACGGGATT 59.107 61.111 13.26 0.00 44.45 3.01
134 135 3.518998 CGAGTCGGCTCACGGGAT 61.519 66.667 18.62 0.00 44.45 3.85
136 137 4.778415 CACGAGTCGGCTCACGGG 62.778 72.222 18.62 1.07 44.45 5.28
153 154 1.099295 GGTAAAGTACGGCATGGGGC 61.099 60.000 0.00 0.00 43.74 5.80
154 155 0.253610 TGGTAAAGTACGGCATGGGG 59.746 55.000 0.00 0.00 0.00 4.96
155 156 1.946768 CATGGTAAAGTACGGCATGGG 59.053 52.381 0.00 0.00 29.95 4.00
156 157 1.333619 GCATGGTAAAGTACGGCATGG 59.666 52.381 0.00 0.00 32.46 3.66
157 158 1.333619 GGCATGGTAAAGTACGGCATG 59.666 52.381 0.00 0.00 33.93 4.06
158 159 1.675552 GGCATGGTAAAGTACGGCAT 58.324 50.000 0.00 0.00 0.00 4.40
159 160 0.741574 CGGCATGGTAAAGTACGGCA 60.742 55.000 0.00 0.00 0.00 5.69
160 161 1.433837 CCGGCATGGTAAAGTACGGC 61.434 60.000 0.00 0.00 33.01 5.68
161 162 1.433837 GCCGGCATGGTAAAGTACGG 61.434 60.000 24.80 0.00 41.21 4.02
162 163 1.758319 CGCCGGCATGGTAAAGTACG 61.758 60.000 28.98 0.12 41.21 3.67
163 164 0.460635 TCGCCGGCATGGTAAAGTAC 60.461 55.000 28.98 0.00 41.21 2.73
164 165 0.460635 GTCGCCGGCATGGTAAAGTA 60.461 55.000 28.98 0.00 41.21 2.24
165 166 1.743995 GTCGCCGGCATGGTAAAGT 60.744 57.895 28.98 0.00 41.21 2.66
166 167 2.469516 GGTCGCCGGCATGGTAAAG 61.470 63.158 28.98 7.38 41.21 1.85
167 168 2.437002 GGTCGCCGGCATGGTAAA 60.437 61.111 28.98 0.00 41.21 2.01
168 169 4.823419 CGGTCGCCGGCATGGTAA 62.823 66.667 28.98 0.35 44.15 2.85
178 179 2.359478 AATGTTGGTCCGGTCGCC 60.359 61.111 0.00 3.21 0.00 5.54
179 180 1.375523 AGAATGTTGGTCCGGTCGC 60.376 57.895 0.00 0.00 0.00 5.19
180 181 1.019278 CCAGAATGTTGGTCCGGTCG 61.019 60.000 0.00 0.00 33.38 4.79
181 182 0.676782 CCCAGAATGTTGGTCCGGTC 60.677 60.000 0.00 0.00 36.45 4.79
182 183 1.131303 TCCCAGAATGTTGGTCCGGT 61.131 55.000 0.00 0.00 36.45 5.28
183 184 0.392998 CTCCCAGAATGTTGGTCCGG 60.393 60.000 0.00 0.00 36.45 5.14
184 185 1.026718 GCTCCCAGAATGTTGGTCCG 61.027 60.000 0.00 0.00 36.45 4.79
185 186 1.026718 CGCTCCCAGAATGTTGGTCC 61.027 60.000 0.00 0.00 36.45 4.46
186 187 1.648467 GCGCTCCCAGAATGTTGGTC 61.648 60.000 0.00 0.00 36.45 4.02
187 188 1.675641 GCGCTCCCAGAATGTTGGT 60.676 57.895 0.00 0.00 36.45 3.67
188 189 1.651240 CTGCGCTCCCAGAATGTTGG 61.651 60.000 9.73 0.00 38.00 3.77
189 190 1.798735 CTGCGCTCCCAGAATGTTG 59.201 57.895 9.73 0.00 34.77 3.33
190 191 2.042831 GCTGCGCTCCCAGAATGTT 61.043 57.895 9.73 0.00 34.77 2.71
191 192 2.437359 GCTGCGCTCCCAGAATGT 60.437 61.111 9.73 0.00 34.77 2.71
192 193 3.207669 GGCTGCGCTCCCAGAATG 61.208 66.667 9.73 0.00 34.77 2.67
193 194 4.845580 CGGCTGCGCTCCCAGAAT 62.846 66.667 9.73 0.00 34.77 2.40
199 200 3.521529 ATATGGTCGGCTGCGCTCC 62.522 63.158 9.73 9.22 0.00 4.70
200 201 2.029666 ATATGGTCGGCTGCGCTC 59.970 61.111 9.73 0.00 0.00 5.03
201 202 2.280389 CATATGGTCGGCTGCGCT 60.280 61.111 9.73 0.00 0.00 5.92
202 203 2.280119 TCATATGGTCGGCTGCGC 60.280 61.111 0.00 0.00 0.00 6.09
203 204 0.601046 ATGTCATATGGTCGGCTGCG 60.601 55.000 2.13 0.00 0.00 5.18
204 205 0.870393 CATGTCATATGGTCGGCTGC 59.130 55.000 2.13 0.00 0.00 5.25
205 206 1.516161 CCATGTCATATGGTCGGCTG 58.484 55.000 2.13 0.00 34.56 4.85
206 207 0.397941 CCCATGTCATATGGTCGGCT 59.602 55.000 2.13 0.00 37.48 5.52
207 208 1.237285 GCCCATGTCATATGGTCGGC 61.237 60.000 2.13 3.93 37.48 5.54
208 209 0.108396 TGCCCATGTCATATGGTCGG 59.892 55.000 2.13 0.00 37.48 4.79
209 210 1.229428 GTGCCCATGTCATATGGTCG 58.771 55.000 2.13 0.00 37.48 4.79
210 211 1.229428 CGTGCCCATGTCATATGGTC 58.771 55.000 2.13 0.00 37.48 4.02
211 212 0.819259 GCGTGCCCATGTCATATGGT 60.819 55.000 2.13 0.00 37.48 3.55
212 213 0.818852 TGCGTGCCCATGTCATATGG 60.819 55.000 2.13 0.00 38.88 2.74
213 214 1.198408 GATGCGTGCCCATGTCATATG 59.802 52.381 0.00 0.00 0.00 1.78
214 215 1.527034 GATGCGTGCCCATGTCATAT 58.473 50.000 0.00 0.00 0.00 1.78
215 216 0.534877 GGATGCGTGCCCATGTCATA 60.535 55.000 0.00 0.00 0.00 2.15
216 217 1.825191 GGATGCGTGCCCATGTCAT 60.825 57.895 0.00 0.00 0.00 3.06
217 218 2.438254 GGATGCGTGCCCATGTCA 60.438 61.111 0.00 0.00 0.00 3.58
218 219 3.576356 CGGATGCGTGCCCATGTC 61.576 66.667 0.00 0.00 0.00 3.06
221 222 2.940890 CTAACCGGATGCGTGCCCAT 62.941 60.000 9.46 0.00 0.00 4.00
222 223 3.673956 CTAACCGGATGCGTGCCCA 62.674 63.158 9.46 0.00 0.00 5.36
223 224 2.660258 ATCTAACCGGATGCGTGCCC 62.660 60.000 9.46 0.00 0.00 5.36
224 225 0.814010 AATCTAACCGGATGCGTGCC 60.814 55.000 9.46 0.00 0.00 5.01
225 226 1.792949 CTAATCTAACCGGATGCGTGC 59.207 52.381 9.46 0.00 0.00 5.34
226 227 3.364889 TCTAATCTAACCGGATGCGTG 57.635 47.619 9.46 0.00 0.00 5.34
227 228 4.602340 AATCTAATCTAACCGGATGCGT 57.398 40.909 9.46 0.00 0.00 5.24
228 229 4.988540 TGAAATCTAATCTAACCGGATGCG 59.011 41.667 9.46 0.00 0.00 4.73
229 230 5.107453 CGTGAAATCTAATCTAACCGGATGC 60.107 44.000 9.46 0.00 0.00 3.91
230 231 5.983720 ACGTGAAATCTAATCTAACCGGATG 59.016 40.000 9.46 0.00 0.00 3.51
231 232 6.158023 ACGTGAAATCTAATCTAACCGGAT 57.842 37.500 9.46 0.00 0.00 4.18
232 233 5.587388 ACGTGAAATCTAATCTAACCGGA 57.413 39.130 9.46 0.00 0.00 5.14
233 234 5.501897 GCAACGTGAAATCTAATCTAACCGG 60.502 44.000 0.00 0.00 0.00 5.28
234 235 5.062934 TGCAACGTGAAATCTAATCTAACCG 59.937 40.000 0.00 0.00 0.00 4.44
235 236 6.417191 TGCAACGTGAAATCTAATCTAACC 57.583 37.500 0.00 0.00 0.00 2.85
236 237 8.175069 TCAATGCAACGTGAAATCTAATCTAAC 58.825 33.333 0.00 0.00 0.00 2.34
237 238 8.262715 TCAATGCAACGTGAAATCTAATCTAA 57.737 30.769 0.00 0.00 0.00 2.10
238 239 7.841915 TCAATGCAACGTGAAATCTAATCTA 57.158 32.000 0.00 0.00 0.00 1.98
239 240 6.741992 TCAATGCAACGTGAAATCTAATCT 57.258 33.333 0.00 0.00 0.00 2.40
240 241 6.801377 TGTTCAATGCAACGTGAAATCTAATC 59.199 34.615 11.18 1.07 35.60 1.75
241 242 6.676950 TGTTCAATGCAACGTGAAATCTAAT 58.323 32.000 11.18 0.00 35.60 1.73
242 243 6.066054 TGTTCAATGCAACGTGAAATCTAA 57.934 33.333 11.18 0.00 35.60 2.10
243 244 5.681337 TGTTCAATGCAACGTGAAATCTA 57.319 34.783 11.18 0.00 35.60 1.98
244 245 4.566545 TGTTCAATGCAACGTGAAATCT 57.433 36.364 11.18 0.00 35.60 2.40
245 246 5.827568 ATTGTTCAATGCAACGTGAAATC 57.172 34.783 11.18 3.28 35.60 2.17
246 247 6.310956 CCATATTGTTCAATGCAACGTGAAAT 59.689 34.615 11.18 6.52 35.60 2.17
247 248 5.632764 CCATATTGTTCAATGCAACGTGAAA 59.367 36.000 11.18 0.37 35.60 2.69
248 249 5.048434 TCCATATTGTTCAATGCAACGTGAA 60.048 36.000 8.11 6.72 0.00 3.18
249 250 4.457257 TCCATATTGTTCAATGCAACGTGA 59.543 37.500 8.11 0.00 0.00 4.35
250 251 4.731720 TCCATATTGTTCAATGCAACGTG 58.268 39.130 8.11 0.00 0.00 4.49
251 252 5.581126 ATCCATATTGTTCAATGCAACGT 57.419 34.783 8.11 0.00 0.00 3.99
252 253 6.530887 TCAAATCCATATTGTTCAATGCAACG 59.469 34.615 8.11 0.00 0.00 4.10
253 254 7.010738 CCTCAAATCCATATTGTTCAATGCAAC 59.989 37.037 8.11 0.00 0.00 4.17
254 255 7.042950 CCTCAAATCCATATTGTTCAATGCAA 58.957 34.615 8.11 0.00 0.00 4.08
255 256 6.154877 ACCTCAAATCCATATTGTTCAATGCA 59.845 34.615 8.11 0.00 0.00 3.96
256 257 6.576185 ACCTCAAATCCATATTGTTCAATGC 58.424 36.000 8.11 0.00 0.00 3.56
257 258 7.707893 GGAACCTCAAATCCATATTGTTCAATG 59.292 37.037 8.11 0.00 35.71 2.82
258 259 7.620888 AGGAACCTCAAATCCATATTGTTCAAT 59.379 33.333 3.55 3.55 38.23 2.57
259 260 6.953520 AGGAACCTCAAATCCATATTGTTCAA 59.046 34.615 0.00 0.00 38.23 2.69
260 261 6.493166 AGGAACCTCAAATCCATATTGTTCA 58.507 36.000 0.00 0.00 38.23 3.18
261 262 8.519799 TTAGGAACCTCAAATCCATATTGTTC 57.480 34.615 0.00 0.00 38.23 3.18
262 263 9.492730 AATTAGGAACCTCAAATCCATATTGTT 57.507 29.630 0.00 0.00 38.23 2.83
263 264 9.492730 AAATTAGGAACCTCAAATCCATATTGT 57.507 29.630 0.00 0.00 38.23 2.71
264 265 9.754382 CAAATTAGGAACCTCAAATCCATATTG 57.246 33.333 0.00 0.00 38.23 1.90
265 266 9.713684 TCAAATTAGGAACCTCAAATCCATATT 57.286 29.630 0.00 0.00 38.23 1.28
266 267 9.359653 CTCAAATTAGGAACCTCAAATCCATAT 57.640 33.333 0.00 0.00 38.23 1.78
267 268 8.556589 TCTCAAATTAGGAACCTCAAATCCATA 58.443 33.333 0.00 0.00 38.23 2.74
268 269 7.413446 TCTCAAATTAGGAACCTCAAATCCAT 58.587 34.615 0.00 0.00 38.23 3.41
269 270 6.789268 TCTCAAATTAGGAACCTCAAATCCA 58.211 36.000 0.00 0.00 38.23 3.41
270 271 7.340487 ACATCTCAAATTAGGAACCTCAAATCC 59.660 37.037 0.00 0.00 35.88 3.01
271 272 8.286191 ACATCTCAAATTAGGAACCTCAAATC 57.714 34.615 0.00 0.00 0.00 2.17
272 273 7.340487 GGACATCTCAAATTAGGAACCTCAAAT 59.660 37.037 0.00 0.00 0.00 2.32
273 274 6.659242 GGACATCTCAAATTAGGAACCTCAAA 59.341 38.462 0.00 0.00 0.00 2.69
274 275 6.180472 GGACATCTCAAATTAGGAACCTCAA 58.820 40.000 0.00 0.00 0.00 3.02
275 276 5.626809 CGGACATCTCAAATTAGGAACCTCA 60.627 44.000 0.00 0.00 0.00 3.86
276 277 4.811557 CGGACATCTCAAATTAGGAACCTC 59.188 45.833 0.00 0.00 0.00 3.85
277 278 4.469945 TCGGACATCTCAAATTAGGAACCT 59.530 41.667 0.00 0.00 0.00 3.50
278 279 4.766375 TCGGACATCTCAAATTAGGAACC 58.234 43.478 0.00 0.00 0.00 3.62
279 280 6.316390 ACAATCGGACATCTCAAATTAGGAAC 59.684 38.462 0.00 0.00 0.00 3.62
280 281 6.414732 ACAATCGGACATCTCAAATTAGGAA 58.585 36.000 0.00 0.00 0.00 3.36
281 282 5.989477 ACAATCGGACATCTCAAATTAGGA 58.011 37.500 0.00 0.00 0.00 2.94
282 283 7.786178 TTACAATCGGACATCTCAAATTAGG 57.214 36.000 0.00 0.00 0.00 2.69
283 284 9.490663 GTTTTACAATCGGACATCTCAAATTAG 57.509 33.333 0.00 0.00 0.00 1.73
284 285 8.455682 GGTTTTACAATCGGACATCTCAAATTA 58.544 33.333 0.00 0.00 0.00 1.40
285 286 7.040062 TGGTTTTACAATCGGACATCTCAAATT 60.040 33.333 0.00 0.00 0.00 1.82
286 287 6.432783 TGGTTTTACAATCGGACATCTCAAAT 59.567 34.615 0.00 0.00 0.00 2.32
287 288 5.765677 TGGTTTTACAATCGGACATCTCAAA 59.234 36.000 0.00 0.00 0.00 2.69
288 289 5.309638 TGGTTTTACAATCGGACATCTCAA 58.690 37.500 0.00 0.00 0.00 3.02
289 290 4.900684 TGGTTTTACAATCGGACATCTCA 58.099 39.130 0.00 0.00 0.00 3.27
290 291 5.873179 TTGGTTTTACAATCGGACATCTC 57.127 39.130 0.00 0.00 0.00 2.75
291 292 6.834168 ATTTGGTTTTACAATCGGACATCT 57.166 33.333 0.00 0.00 0.00 2.90
292 293 9.581099 AAATATTTGGTTTTACAATCGGACATC 57.419 29.630 0.00 0.00 0.00 3.06
293 294 9.364989 CAAATATTTGGTTTTACAATCGGACAT 57.635 29.630 18.72 0.00 34.59 3.06
294 295 8.749841 CAAATATTTGGTTTTACAATCGGACA 57.250 30.769 18.72 0.00 34.59 4.02
310 311 2.430332 ACCGGTGCATCCCAAATATTTG 59.570 45.455 19.40 19.40 37.90 2.32
311 312 2.693074 GACCGGTGCATCCCAAATATTT 59.307 45.455 14.63 0.00 0.00 1.40
312 313 2.306847 GACCGGTGCATCCCAAATATT 58.693 47.619 14.63 0.00 0.00 1.28
313 314 1.214175 TGACCGGTGCATCCCAAATAT 59.786 47.619 14.63 0.00 0.00 1.28
314 315 0.621082 TGACCGGTGCATCCCAAATA 59.379 50.000 14.63 0.00 0.00 1.40
315 316 0.680921 CTGACCGGTGCATCCCAAAT 60.681 55.000 14.63 0.00 0.00 2.32
316 317 1.303236 CTGACCGGTGCATCCCAAA 60.303 57.895 14.63 0.00 0.00 3.28
317 318 2.350895 CTGACCGGTGCATCCCAA 59.649 61.111 14.63 0.00 0.00 4.12
318 319 2.927856 ACTGACCGGTGCATCCCA 60.928 61.111 14.63 0.29 0.00 4.37
319 320 2.436646 CACTGACCGGTGCATCCC 60.437 66.667 14.63 0.00 0.00 3.85
320 321 1.741770 GACACTGACCGGTGCATCC 60.742 63.158 14.63 0.00 40.52 3.51
321 322 1.741770 GGACACTGACCGGTGCATC 60.742 63.158 14.63 4.77 40.52 3.91
322 323 2.347490 GGACACTGACCGGTGCAT 59.653 61.111 14.63 0.00 40.52 3.96
323 324 4.293648 CGGACACTGACCGGTGCA 62.294 66.667 14.63 9.37 45.65 4.57
342 343 2.712325 TTAAACTTCCGGGCGCGTCA 62.712 55.000 22.32 5.13 0.00 4.35
343 344 1.963190 CTTAAACTTCCGGGCGCGTC 61.963 60.000 22.32 4.38 0.00 5.19
344 345 2.030862 TTAAACTTCCGGGCGCGT 59.969 55.556 22.32 4.63 0.00 6.01
345 346 2.746803 CCTTAAACTTCCGGGCGCG 61.747 63.158 17.31 17.31 0.00 6.86
346 347 2.404186 CCCTTAAACTTCCGGGCGC 61.404 63.158 0.00 0.00 0.00 6.53
347 348 1.022982 GTCCCTTAAACTTCCGGGCG 61.023 60.000 0.00 0.00 36.61 6.13
348 349 0.679002 GGTCCCTTAAACTTCCGGGC 60.679 60.000 0.00 0.00 36.61 6.13
349 350 0.392060 CGGTCCCTTAAACTTCCGGG 60.392 60.000 0.00 0.00 38.07 5.73
350 351 3.148340 CGGTCCCTTAAACTTCCGG 57.852 57.895 0.00 0.00 35.25 5.14
351 352 0.609662 TCCGGTCCCTTAAACTTCCG 59.390 55.000 0.00 0.00 38.05 4.30
352 353 3.361281 AATCCGGTCCCTTAAACTTCC 57.639 47.619 0.00 0.00 0.00 3.46
353 354 3.119602 GCAAATCCGGTCCCTTAAACTTC 60.120 47.826 0.00 0.00 0.00 3.01
354 355 2.823747 GCAAATCCGGTCCCTTAAACTT 59.176 45.455 0.00 0.00 0.00 2.66
355 356 2.443416 GCAAATCCGGTCCCTTAAACT 58.557 47.619 0.00 0.00 0.00 2.66
356 357 1.475280 GGCAAATCCGGTCCCTTAAAC 59.525 52.381 0.00 0.00 0.00 2.01
357 358 1.617533 GGGCAAATCCGGTCCCTTAAA 60.618 52.381 0.00 0.00 35.87 1.52
358 359 0.033894 GGGCAAATCCGGTCCCTTAA 60.034 55.000 0.00 0.00 35.87 1.85
359 360 1.208844 TGGGCAAATCCGGTCCCTTA 61.209 55.000 0.00 0.00 39.49 2.69
360 361 1.874299 ATGGGCAAATCCGGTCCCTT 61.874 55.000 0.00 1.50 39.49 3.95
361 362 2.284515 GATGGGCAAATCCGGTCCCT 62.285 60.000 0.00 0.00 39.49 4.20
362 363 1.828224 GATGGGCAAATCCGGTCCC 60.828 63.158 0.00 6.45 39.22 4.46
363 364 1.077068 TGATGGGCAAATCCGGTCC 60.077 57.895 0.00 0.00 34.94 4.46
364 365 1.714899 CGTGATGGGCAAATCCGGTC 61.715 60.000 0.00 0.00 34.94 4.79
365 366 1.748879 CGTGATGGGCAAATCCGGT 60.749 57.895 0.00 0.00 34.94 5.28
366 367 1.714899 GACGTGATGGGCAAATCCGG 61.715 60.000 0.00 0.00 34.94 5.14
367 368 0.744414 AGACGTGATGGGCAAATCCG 60.744 55.000 0.00 0.00 34.94 4.18
368 369 2.325583 TAGACGTGATGGGCAAATCC 57.674 50.000 0.00 0.00 0.00 3.01
369 370 4.883083 TCTATAGACGTGATGGGCAAATC 58.117 43.478 0.00 0.00 0.00 2.17
370 371 4.955811 TCTATAGACGTGATGGGCAAAT 57.044 40.909 0.00 0.00 0.00 2.32
371 372 4.631131 CATCTATAGACGTGATGGGCAAA 58.369 43.478 4.10 0.00 35.32 3.68
372 373 3.554960 GCATCTATAGACGTGATGGGCAA 60.555 47.826 4.10 0.00 38.30 4.52
373 374 2.029020 GCATCTATAGACGTGATGGGCA 60.029 50.000 4.10 0.00 38.30 5.36
374 375 2.232452 AGCATCTATAGACGTGATGGGC 59.768 50.000 4.10 2.18 38.30 5.36
375 376 4.103365 GAGCATCTATAGACGTGATGGG 57.897 50.000 4.10 0.00 38.30 4.00
390 391 8.467402 AGCATTACGTATTATGTAAGAGCATC 57.533 34.615 23.66 9.22 37.18 3.91
391 392 8.712363 CAAGCATTACGTATTATGTAAGAGCAT 58.288 33.333 23.66 16.13 37.18 3.79
392 393 7.709182 ACAAGCATTACGTATTATGTAAGAGCA 59.291 33.333 23.66 3.98 37.18 4.26
393 394 8.004344 CACAAGCATTACGTATTATGTAAGAGC 58.996 37.037 18.80 18.80 36.05 4.09
394 395 8.487970 CCACAAGCATTACGTATTATGTAAGAG 58.512 37.037 12.67 9.40 33.56 2.85
395 396 7.439955 CCCACAAGCATTACGTATTATGTAAGA 59.560 37.037 12.67 0.00 33.56 2.10
396 397 7.307751 CCCCACAAGCATTACGTATTATGTAAG 60.308 40.741 12.67 7.39 33.56 2.34
397 398 6.483974 CCCCACAAGCATTACGTATTATGTAA 59.516 38.462 10.19 10.19 34.45 2.41
398 399 5.992829 CCCCACAAGCATTACGTATTATGTA 59.007 40.000 8.61 0.00 0.00 2.29
399 400 4.819630 CCCCACAAGCATTACGTATTATGT 59.180 41.667 8.61 2.70 0.00 2.29
400 401 4.215399 CCCCCACAAGCATTACGTATTATG 59.785 45.833 0.00 0.00 0.00 1.90
401 402 4.103469 TCCCCCACAAGCATTACGTATTAT 59.897 41.667 0.00 0.00 0.00 1.28
402 403 3.455177 TCCCCCACAAGCATTACGTATTA 59.545 43.478 0.00 0.00 0.00 0.98
403 404 2.240160 TCCCCCACAAGCATTACGTATT 59.760 45.455 0.00 0.00 0.00 1.89
404 405 1.841277 TCCCCCACAAGCATTACGTAT 59.159 47.619 0.00 0.00 0.00 3.06
405 406 1.208535 CTCCCCCACAAGCATTACGTA 59.791 52.381 0.00 0.00 0.00 3.57
406 407 0.035439 CTCCCCCACAAGCATTACGT 60.035 55.000 0.00 0.00 0.00 3.57
407 408 0.748005 CCTCCCCCACAAGCATTACG 60.748 60.000 0.00 0.00 0.00 3.18
408 409 1.037579 GCCTCCCCCACAAGCATTAC 61.038 60.000 0.00 0.00 0.00 1.89
409 410 1.306296 GCCTCCCCCACAAGCATTA 59.694 57.895 0.00 0.00 0.00 1.90
410 411 2.037847 GCCTCCCCCACAAGCATT 59.962 61.111 0.00 0.00 0.00 3.56
411 412 4.431131 CGCCTCCCCCACAAGCAT 62.431 66.667 0.00 0.00 0.00 3.79
414 415 4.101448 CTCCGCCTCCCCCACAAG 62.101 72.222 0.00 0.00 0.00 3.16
419 420 4.798682 TTCTCCTCCGCCTCCCCC 62.799 72.222 0.00 0.00 0.00 5.40
420 421 3.157949 CTTCTCCTCCGCCTCCCC 61.158 72.222 0.00 0.00 0.00 4.81
421 422 2.364448 ACTTCTCCTCCGCCTCCC 60.364 66.667 0.00 0.00 0.00 4.30
422 423 2.726351 CCACTTCTCCTCCGCCTCC 61.726 68.421 0.00 0.00 0.00 4.30
423 424 1.682684 TCCACTTCTCCTCCGCCTC 60.683 63.158 0.00 0.00 0.00 4.70
463 464 1.302431 TTGTGTGGCATCTGTCCCG 60.302 57.895 0.00 0.00 0.00 5.14
464 465 0.537143 TGTTGTGTGGCATCTGTCCC 60.537 55.000 0.00 0.00 0.00 4.46
465 466 0.593128 GTGTTGTGTGGCATCTGTCC 59.407 55.000 0.00 0.00 0.00 4.02
466 467 1.308047 TGTGTTGTGTGGCATCTGTC 58.692 50.000 0.00 0.00 0.00 3.51
467 468 1.405105 GTTGTGTTGTGTGGCATCTGT 59.595 47.619 0.00 0.00 0.00 3.41
468 469 1.404748 TGTTGTGTTGTGTGGCATCTG 59.595 47.619 0.00 0.00 0.00 2.90
494 495 0.836400 TCCTCCTGTCCTTTTCCGCT 60.836 55.000 0.00 0.00 0.00 5.52
495 496 0.391793 CTCCTCCTGTCCTTTTCCGC 60.392 60.000 0.00 0.00 0.00 5.54
497 498 1.557371 CTCCTCCTCCTGTCCTTTTCC 59.443 57.143 0.00 0.00 0.00 3.13
519 582 1.402613 TCCATCATTGCGCTTGATGTG 59.597 47.619 32.56 26.90 45.83 3.21
520 583 1.753930 TCCATCATTGCGCTTGATGT 58.246 45.000 32.56 13.90 45.83 3.06
523 599 1.026584 CCATCCATCATTGCGCTTGA 58.973 50.000 9.73 12.65 0.00 3.02
526 602 0.820891 GGTCCATCCATCATTGCGCT 60.821 55.000 9.73 0.00 35.97 5.92
528 604 2.146342 GTAGGTCCATCCATCATTGCG 58.854 52.381 0.00 0.00 39.02 4.85
529 605 2.146342 CGTAGGTCCATCCATCATTGC 58.854 52.381 0.00 0.00 39.02 3.56
532 608 1.070758 GCACGTAGGTCCATCCATCAT 59.929 52.381 0.00 0.00 39.02 2.45
542 618 2.553172 CCTCCTATACAGCACGTAGGTC 59.447 54.545 0.00 0.00 37.01 3.85
544 620 2.814919 CTCCTCCTATACAGCACGTAGG 59.185 54.545 0.00 0.00 37.03 3.18
545 621 2.226912 GCTCCTCCTATACAGCACGTAG 59.773 54.545 0.00 0.00 32.28 3.51
548 624 1.032794 TGCTCCTCCTATACAGCACG 58.967 55.000 0.00 0.00 36.96 5.34
549 625 4.382470 CCATATGCTCCTCCTATACAGCAC 60.382 50.000 0.00 0.00 44.44 4.40
550 626 3.771479 CCATATGCTCCTCCTATACAGCA 59.229 47.826 0.00 0.00 45.65 4.41
551 627 3.133721 CCCATATGCTCCTCCTATACAGC 59.866 52.174 0.00 0.00 0.00 4.40
552 628 4.161189 CACCCATATGCTCCTCCTATACAG 59.839 50.000 0.00 0.00 0.00 2.74
553 629 4.096681 CACCCATATGCTCCTCCTATACA 58.903 47.826 0.00 0.00 0.00 2.29
554 630 4.353777 TCACCCATATGCTCCTCCTATAC 58.646 47.826 0.00 0.00 0.00 1.47
555 631 4.045974 ACTCACCCATATGCTCCTCCTATA 59.954 45.833 0.00 0.00 0.00 1.31
557 633 2.180086 ACTCACCCATATGCTCCTCCTA 59.820 50.000 0.00 0.00 0.00 2.94
559 635 1.346068 GACTCACCCATATGCTCCTCC 59.654 57.143 0.00 0.00 0.00 4.30
560 636 2.042464 TGACTCACCCATATGCTCCTC 58.958 52.381 0.00 0.00 0.00 3.71
561 637 2.180946 TGACTCACCCATATGCTCCT 57.819 50.000 0.00 0.00 0.00 3.69
562 638 3.498774 AATGACTCACCCATATGCTCC 57.501 47.619 0.00 0.00 0.00 4.70
563 639 4.276926 GGAAAATGACTCACCCATATGCTC 59.723 45.833 0.00 0.00 0.00 4.26
564 640 4.210331 GGAAAATGACTCACCCATATGCT 58.790 43.478 0.00 0.00 0.00 3.79
566 642 5.010314 CCATGGAAAATGACTCACCCATATG 59.990 44.000 5.56 0.00 33.50 1.78
567 643 5.142639 CCATGGAAAATGACTCACCCATAT 58.857 41.667 5.56 0.00 33.50 1.78
568 644 4.535781 CCATGGAAAATGACTCACCCATA 58.464 43.478 5.56 0.00 33.50 2.74
592 676 0.690192 TCCTGGGCTGTTCGAAATGA 59.310 50.000 0.00 0.00 0.00 2.57
596 680 0.762418 TTCTTCCTGGGCTGTTCGAA 59.238 50.000 0.00 0.00 0.00 3.71
598 682 1.160137 CTTTCTTCCTGGGCTGTTCG 58.840 55.000 0.00 0.00 0.00 3.95
603 687 1.615384 GCATGTCTTTCTTCCTGGGCT 60.615 52.381 0.00 0.00 0.00 5.19
610 694 2.783135 TCTGGTGGCATGTCTTTCTTC 58.217 47.619 0.00 0.00 0.00 2.87
612 696 2.957402 TTCTGGTGGCATGTCTTTCT 57.043 45.000 0.00 0.00 0.00 2.52
613 697 3.149196 TCTTTCTGGTGGCATGTCTTTC 58.851 45.455 0.00 0.00 0.00 2.62
615 699 2.373169 TCTCTTTCTGGTGGCATGTCTT 59.627 45.455 0.00 0.00 0.00 3.01
616 700 1.980765 TCTCTTTCTGGTGGCATGTCT 59.019 47.619 0.00 0.00 0.00 3.41
617 701 2.479566 TCTCTTTCTGGTGGCATGTC 57.520 50.000 0.00 0.00 0.00 3.06
618 702 2.957402 TTCTCTTTCTGGTGGCATGT 57.043 45.000 0.00 0.00 0.00 3.21
619 703 4.589216 TTTTTCTCTTTCTGGTGGCATG 57.411 40.909 0.00 0.00 0.00 4.06
638 778 3.319972 GGCCTACCGTTTTCCTTTCTTTT 59.680 43.478 0.00 0.00 0.00 2.27
643 800 1.133730 TGTGGCCTACCGTTTTCCTTT 60.134 47.619 3.32 0.00 39.70 3.11
646 803 0.535553 TGTGTGGCCTACCGTTTTCC 60.536 55.000 3.32 0.00 39.70 3.13
666 823 7.251281 GCTCGCTTCCTCAATTAGTAATTTTT 58.749 34.615 5.34 0.00 0.00 1.94
669 826 4.508124 CGCTCGCTTCCTCAATTAGTAATT 59.492 41.667 2.10 2.10 0.00 1.40
670 827 4.051922 CGCTCGCTTCCTCAATTAGTAAT 58.948 43.478 0.00 0.00 0.00 1.89
671 828 3.129813 TCGCTCGCTTCCTCAATTAGTAA 59.870 43.478 0.00 0.00 0.00 2.24
672 829 2.686405 TCGCTCGCTTCCTCAATTAGTA 59.314 45.455 0.00 0.00 0.00 1.82
673 830 1.476891 TCGCTCGCTTCCTCAATTAGT 59.523 47.619 0.00 0.00 0.00 2.24
675 832 1.802880 GCTCGCTCGCTTCCTCAATTA 60.803 52.381 0.00 0.00 0.00 1.40
677 834 1.520342 GCTCGCTCGCTTCCTCAAT 60.520 57.895 0.00 0.00 0.00 2.57
678 835 2.125912 GCTCGCTCGCTTCCTCAA 60.126 61.111 0.00 0.00 0.00 3.02
679 836 4.482684 CGCTCGCTCGCTTCCTCA 62.483 66.667 0.00 0.00 0.00 3.86
702 884 1.900981 TGGGTGGGACGCATGTTTG 60.901 57.895 0.00 0.00 43.02 2.93
733 915 0.890683 TTCCGGACGAAGGGAGTAAC 59.109 55.000 1.83 0.00 33.01 2.50
735 917 1.856629 ATTTCCGGACGAAGGGAGTA 58.143 50.000 1.83 0.00 33.01 2.59
736 918 1.479730 GTATTTCCGGACGAAGGGAGT 59.520 52.381 1.83 0.00 33.01 3.85
737 919 1.755380 AGTATTTCCGGACGAAGGGAG 59.245 52.381 1.83 0.00 33.01 4.30
738 920 1.856629 AGTATTTCCGGACGAAGGGA 58.143 50.000 1.83 0.00 0.00 4.20
739 921 2.685850 AAGTATTTCCGGACGAAGGG 57.314 50.000 1.83 0.00 0.00 3.95
740 922 3.979495 CGATAAGTATTTCCGGACGAAGG 59.021 47.826 1.83 0.00 0.00 3.46
741 923 4.852138 TCGATAAGTATTTCCGGACGAAG 58.148 43.478 1.83 0.00 0.00 3.79
742 924 4.898829 TCGATAAGTATTTCCGGACGAA 57.101 40.909 1.83 0.00 0.00 3.85
743 925 4.898829 TTCGATAAGTATTTCCGGACGA 57.101 40.909 1.83 3.31 0.00 4.20
744 926 5.954434 TTTTCGATAAGTATTTCCGGACG 57.046 39.130 1.83 0.27 0.00 4.79
769 951 9.851686 AGTTCTAGATACATCCATTTTTATGCA 57.148 29.630 0.00 0.00 0.00 3.96
796 978 8.647796 TGGAATGGATGTATCTAGACGTATTTT 58.352 33.333 0.00 0.00 0.00 1.82
797 979 8.190326 TGGAATGGATGTATCTAGACGTATTT 57.810 34.615 0.00 0.00 0.00 1.40
798 980 7.776618 TGGAATGGATGTATCTAGACGTATT 57.223 36.000 0.00 0.00 0.00 1.89
799 981 7.201741 CGATGGAATGGATGTATCTAGACGTAT 60.202 40.741 0.00 0.00 0.00 3.06
800 982 6.093633 CGATGGAATGGATGTATCTAGACGTA 59.906 42.308 0.00 0.00 0.00 3.57
801 983 5.106118 CGATGGAATGGATGTATCTAGACGT 60.106 44.000 0.00 0.00 0.00 4.34
802 984 5.123979 TCGATGGAATGGATGTATCTAGACG 59.876 44.000 0.00 0.00 0.00 4.18
803 985 6.071896 TGTCGATGGAATGGATGTATCTAGAC 60.072 42.308 0.00 0.00 32.34 2.59
804 986 6.010219 TGTCGATGGAATGGATGTATCTAGA 58.990 40.000 0.00 0.00 32.34 2.43
805 987 6.272822 TGTCGATGGAATGGATGTATCTAG 57.727 41.667 0.00 0.00 32.34 2.43
806 988 6.267699 ACTTGTCGATGGAATGGATGTATCTA 59.732 38.462 0.00 0.00 32.34 1.98
807 989 5.070981 ACTTGTCGATGGAATGGATGTATCT 59.929 40.000 0.00 0.00 32.34 1.98
808 990 5.300752 ACTTGTCGATGGAATGGATGTATC 58.699 41.667 0.00 0.00 32.34 2.24
809 991 5.296151 ACTTGTCGATGGAATGGATGTAT 57.704 39.130 0.00 0.00 32.34 2.29
810 992 4.753516 ACTTGTCGATGGAATGGATGTA 57.246 40.909 0.00 0.00 32.34 2.29
811 993 3.634397 ACTTGTCGATGGAATGGATGT 57.366 42.857 0.00 0.00 32.34 3.06
812 994 6.484643 AGAAATACTTGTCGATGGAATGGATG 59.515 38.462 0.00 0.00 32.34 3.51
813 995 6.484643 CAGAAATACTTGTCGATGGAATGGAT 59.515 38.462 0.00 0.00 32.34 3.41
814 996 5.817296 CAGAAATACTTGTCGATGGAATGGA 59.183 40.000 0.00 0.00 0.00 3.41
815 997 5.008019 CCAGAAATACTTGTCGATGGAATGG 59.992 44.000 0.00 0.00 0.00 3.16
816 998 5.817296 TCCAGAAATACTTGTCGATGGAATG 59.183 40.000 0.00 0.00 32.84 2.67
817 999 5.817816 GTCCAGAAATACTTGTCGATGGAAT 59.182 40.000 0.00 0.00 37.34 3.01
818 1000 5.175859 GTCCAGAAATACTTGTCGATGGAA 58.824 41.667 0.00 0.00 37.34 3.53
819 1001 4.676986 CGTCCAGAAATACTTGTCGATGGA 60.677 45.833 0.00 0.00 33.33 3.41
820 1002 3.551890 CGTCCAGAAATACTTGTCGATGG 59.448 47.826 0.00 0.00 0.00 3.51
821 1003 3.551890 CCGTCCAGAAATACTTGTCGATG 59.448 47.826 0.00 0.00 0.00 3.84
822 1004 3.446161 TCCGTCCAGAAATACTTGTCGAT 59.554 43.478 0.00 0.00 0.00 3.59
823 1005 2.821378 TCCGTCCAGAAATACTTGTCGA 59.179 45.455 0.00 0.00 0.00 4.20
824 1006 3.179830 CTCCGTCCAGAAATACTTGTCG 58.820 50.000 0.00 0.00 0.00 4.35
825 1007 3.194968 TCCTCCGTCCAGAAATACTTGTC 59.805 47.826 0.00 0.00 0.00 3.18
826 1008 3.170717 TCCTCCGTCCAGAAATACTTGT 58.829 45.455 0.00 0.00 0.00 3.16
827 1009 3.887621 TCCTCCGTCCAGAAATACTTG 57.112 47.619 0.00 0.00 0.00 3.16
828 1010 3.838903 ACTTCCTCCGTCCAGAAATACTT 59.161 43.478 0.00 0.00 0.00 2.24
829 1011 3.442076 ACTTCCTCCGTCCAGAAATACT 58.558 45.455 0.00 0.00 0.00 2.12
830 1012 3.889520 ACTTCCTCCGTCCAGAAATAC 57.110 47.619 0.00 0.00 0.00 1.89
831 1013 6.555463 AAATACTTCCTCCGTCCAGAAATA 57.445 37.500 0.00 0.00 0.00 1.40
832 1014 5.437191 AAATACTTCCTCCGTCCAGAAAT 57.563 39.130 0.00 0.00 0.00 2.17
833 1015 4.903045 AAATACTTCCTCCGTCCAGAAA 57.097 40.909 0.00 0.00 0.00 2.52
834 1016 4.903045 AAAATACTTCCTCCGTCCAGAA 57.097 40.909 0.00 0.00 0.00 3.02
835 1017 4.903045 AAAAATACTTCCTCCGTCCAGA 57.097 40.909 0.00 0.00 0.00 3.86
856 1038 7.415086 AGGTGGGGTGATGTGTTATTATTAAA 58.585 34.615 0.00 0.00 0.00 1.52
857 1039 6.975949 AGGTGGGGTGATGTGTTATTATTAA 58.024 36.000 0.00 0.00 0.00 1.40
873 1055 1.229529 CAGGTAGGTGAGGTGGGGT 60.230 63.158 0.00 0.00 0.00 4.95
893 1075 2.772287 GGCTTCAACTGAGCAAGTACT 58.228 47.619 0.00 0.00 38.56 2.73
897 1079 0.795085 CTCGGCTTCAACTGAGCAAG 59.205 55.000 0.00 0.00 36.31 4.01
898 1080 0.603707 CCTCGGCTTCAACTGAGCAA 60.604 55.000 0.00 0.00 41.03 3.91
899 1081 1.004560 CCTCGGCTTCAACTGAGCA 60.005 57.895 0.00 0.00 41.03 4.26
900 1082 1.004440 ACCTCGGCTTCAACTGAGC 60.004 57.895 0.00 0.00 41.03 4.26
901 1083 0.318441 TCACCTCGGCTTCAACTGAG 59.682 55.000 0.00 0.00 41.86 3.35
1078 1290 5.104900 AGGATCCAATATATAAGCCCGTGTC 60.105 44.000 15.82 0.00 0.00 3.67
1079 1291 4.783227 AGGATCCAATATATAAGCCCGTGT 59.217 41.667 15.82 0.00 0.00 4.49
1080 1292 5.129485 AGAGGATCCAATATATAAGCCCGTG 59.871 44.000 15.82 0.00 33.66 4.94
1081 1293 5.129485 CAGAGGATCCAATATATAAGCCCGT 59.871 44.000 15.82 0.00 33.66 5.28
1123 1341 1.313812 AAGCAAGAGCAGCATCCAGC 61.314 55.000 0.00 0.00 45.49 4.85
1126 1344 1.065701 CATCAAGCAAGAGCAGCATCC 59.934 52.381 0.00 0.00 45.49 3.51
1127 1345 1.743958 ACATCAAGCAAGAGCAGCATC 59.256 47.619 0.00 0.00 45.49 3.91
1128 1346 1.743958 GACATCAAGCAAGAGCAGCAT 59.256 47.619 0.00 0.00 45.49 3.79
1130 1348 1.130749 CAGACATCAAGCAAGAGCAGC 59.869 52.381 0.00 0.00 45.49 5.25
1131 1349 2.415857 GACAGACATCAAGCAAGAGCAG 59.584 50.000 0.00 0.00 45.49 4.24
1170 1388 4.571919 ACAAGCAATCAAACAATGGATGG 58.428 39.130 0.00 0.00 0.00 3.51
1182 1400 4.156556 GCTAATGAACTGGACAAGCAATCA 59.843 41.667 0.00 0.00 0.00 2.57
1192 1410 7.122799 AGTCGCATATATAGCTAATGAACTGGA 59.877 37.037 7.88 0.00 0.00 3.86
1217 1435 7.596248 CACATTAATCAGGAGGAACAAAACAAG 59.404 37.037 0.00 0.00 0.00 3.16
1333 1554 4.009675 GTGAGTGAACATGGATGGCTTAA 58.990 43.478 0.00 0.00 0.00 1.85
1334 1555 3.264193 AGTGAGTGAACATGGATGGCTTA 59.736 43.478 0.00 0.00 0.00 3.09
1335 1556 2.040813 AGTGAGTGAACATGGATGGCTT 59.959 45.455 0.00 0.00 0.00 4.35
1337 1558 2.012673 GAGTGAGTGAACATGGATGGC 58.987 52.381 0.00 0.00 0.00 4.40
1338 1559 3.005554 GTGAGTGAGTGAACATGGATGG 58.994 50.000 0.00 0.00 0.00 3.51
1339 1560 3.935315 AGTGAGTGAGTGAACATGGATG 58.065 45.455 0.00 0.00 0.00 3.51
1341 1562 3.732212 CAAGTGAGTGAGTGAACATGGA 58.268 45.455 0.00 0.00 0.00 3.41
1342 1563 2.225019 GCAAGTGAGTGAGTGAACATGG 59.775 50.000 0.00 0.00 0.00 3.66
1343 1564 2.225019 GGCAAGTGAGTGAGTGAACATG 59.775 50.000 0.00 0.00 0.00 3.21
1344 1565 2.105477 AGGCAAGTGAGTGAGTGAACAT 59.895 45.455 0.00 0.00 0.00 2.71
1346 1567 2.139118 GAGGCAAGTGAGTGAGTGAAC 58.861 52.381 0.00 0.00 0.00 3.18
1389 1614 3.053831 TGAAAGACCCGATTCAGTTCC 57.946 47.619 0.00 0.00 32.14 3.62
1460 1687 6.198591 GTGAGTGAAACAGAGTGTGTAACTAC 59.801 42.308 0.00 0.00 39.03 2.73
1461 1688 6.270815 GTGAGTGAAACAGAGTGTGTAACTA 58.729 40.000 0.00 0.00 39.03 2.24
1488 1715 2.618241 GTGAGTGGACATTGCAAACAGA 59.382 45.455 1.71 0.00 0.00 3.41
1502 1729 5.174395 CAAATAGGAACAGAGAGTGAGTGG 58.826 45.833 0.00 0.00 0.00 4.00
1532 1759 7.672983 ATGTACTCAGTTGACCTAATTTGTG 57.327 36.000 0.00 0.00 0.00 3.33
1562 1811 9.856162 AGGGTACAGTAAAAGAACTCAAAATAA 57.144 29.630 0.00 0.00 0.00 1.40
1563 1812 9.280174 CAGGGTACAGTAAAAGAACTCAAAATA 57.720 33.333 0.00 0.00 0.00 1.40
1564 1813 7.996644 TCAGGGTACAGTAAAAGAACTCAAAAT 59.003 33.333 0.00 0.00 0.00 1.82
1565 1814 7.340256 TCAGGGTACAGTAAAAGAACTCAAAA 58.660 34.615 0.00 0.00 0.00 2.44
1566 1815 6.891388 TCAGGGTACAGTAAAAGAACTCAAA 58.109 36.000 0.00 0.00 0.00 2.69
1567 1816 6.488769 TCAGGGTACAGTAAAAGAACTCAA 57.511 37.500 0.00 0.00 0.00 3.02
1788 2059 6.634805 ACGAACAATGATTGACTGAGTCTAT 58.365 36.000 12.80 11.76 33.15 1.98
1919 2647 1.148310 GTAGCTGACGCTCAAGCAAA 58.852 50.000 0.00 0.00 45.15 3.68
2062 2791 4.873827 TCTATACGTGGAAGCAATTCAACC 59.126 41.667 0.00 0.00 0.00 3.77
2100 2836 9.233232 CGACCCAATTAAATTAATTCAGTTAGC 57.767 33.333 7.92 0.00 36.29 3.09
2123 2860 3.059868 TGTTCAGAAATTGTCTTCGCGAC 60.060 43.478 9.15 0.00 43.14 5.19
2149 2886 3.059461 GCTACTCATCCGTTCTCTAGTCG 60.059 52.174 0.00 0.00 0.00 4.18
2285 3029 7.268586 CACTACTAGATAATGGTTTGCAGTCT 58.731 38.462 0.00 0.00 0.00 3.24
2433 3199 4.747009 GCATCTCCCTAATCCCAAACCTAC 60.747 50.000 0.00 0.00 0.00 3.18
2494 3279 0.602905 ACCTCTTGGTTCTTTCGCGG 60.603 55.000 6.13 0.00 46.05 6.46
2715 3506 8.905702 GTTTCAAGCAATAGTTACAAGACATTG 58.094 33.333 0.00 0.00 42.46 2.82
2716 3507 8.082242 GGTTTCAAGCAATAGTTACAAGACATT 58.918 33.333 0.00 0.00 0.00 2.71
2717 3508 7.573096 CGGTTTCAAGCAATAGTTACAAGACAT 60.573 37.037 0.00 0.00 0.00 3.06
2718 3509 6.293190 CGGTTTCAAGCAATAGTTACAAGACA 60.293 38.462 0.00 0.00 0.00 3.41
2719 3510 6.077838 CGGTTTCAAGCAATAGTTACAAGAC 58.922 40.000 0.00 0.00 0.00 3.01
2720 3511 5.334569 GCGGTTTCAAGCAATAGTTACAAGA 60.335 40.000 0.00 0.00 0.00 3.02
2721 3512 4.851558 GCGGTTTCAAGCAATAGTTACAAG 59.148 41.667 0.00 0.00 0.00 3.16
2722 3513 4.517453 AGCGGTTTCAAGCAATAGTTACAA 59.483 37.500 0.00 0.00 35.48 2.41
2723 3514 4.069304 AGCGGTTTCAAGCAATAGTTACA 58.931 39.130 0.00 0.00 35.48 2.41
2724 3515 4.083484 ACAGCGGTTTCAAGCAATAGTTAC 60.083 41.667 0.00 0.00 35.48 2.50
2725 3516 4.069304 ACAGCGGTTTCAAGCAATAGTTA 58.931 39.130 0.00 0.00 35.48 2.24
2726 3517 2.884639 ACAGCGGTTTCAAGCAATAGTT 59.115 40.909 0.00 0.00 35.48 2.24
2727 3518 2.226437 CACAGCGGTTTCAAGCAATAGT 59.774 45.455 0.00 0.00 35.48 2.12
2728 3519 2.483877 TCACAGCGGTTTCAAGCAATAG 59.516 45.455 0.00 0.00 35.48 1.73
2729 3520 2.499197 TCACAGCGGTTTCAAGCAATA 58.501 42.857 0.00 0.00 35.48 1.90
2730 3521 1.317613 TCACAGCGGTTTCAAGCAAT 58.682 45.000 0.00 0.00 35.48 3.56
2731 3522 1.317613 ATCACAGCGGTTTCAAGCAA 58.682 45.000 0.00 0.00 35.48 3.91
2732 3523 1.266718 GAATCACAGCGGTTTCAAGCA 59.733 47.619 0.00 0.00 35.48 3.91
2733 3524 1.266718 TGAATCACAGCGGTTTCAAGC 59.733 47.619 2.17 0.00 0.00 4.01
2734 3525 3.624326 TTGAATCACAGCGGTTTCAAG 57.376 42.857 11.31 0.00 34.20 3.02
2744 3535 9.734620 TTCAAAAACTAGACATTTGAATCACAG 57.265 29.630 20.55 0.00 43.99 3.66
2767 3558 5.168569 CGAACAGCTTTAGACCATAGTTCA 58.831 41.667 0.00 0.00 35.19 3.18
2768 3559 5.062308 CACGAACAGCTTTAGACCATAGTTC 59.938 44.000 0.00 0.00 0.00 3.01
2774 3565 2.902705 ACACGAACAGCTTTAGACCA 57.097 45.000 0.00 0.00 0.00 4.02
2778 3569 9.638300 GATAAAATGATACACGAACAGCTTTAG 57.362 33.333 0.00 0.00 0.00 1.85
2905 3696 3.191162 TGCGGGTTGAATTCTCTGAAATG 59.809 43.478 7.05 0.00 0.00 2.32
2976 3768 4.799280 GTTTCAACAAAACACAGTGACG 57.201 40.909 7.81 0.00 45.49 4.35
2997 3790 1.241315 AAATCCGGACTGCGGGTTTG 61.241 55.000 18.43 0.00 36.04 2.93
2998 3791 0.325602 TAAATCCGGACTGCGGGTTT 59.674 50.000 22.02 22.02 36.04 3.27
3052 3845 4.741928 ACCTAAAACATCAGGGGAGTTT 57.258 40.909 0.00 0.00 37.08 2.66
3056 3850 6.395780 TGAATTACCTAAAACATCAGGGGA 57.604 37.500 0.00 0.00 36.15 4.81
3455 4253 3.731726 TATTTGCAATCCGGGTCGCCA 62.732 52.381 0.00 0.00 0.00 5.69
3550 4350 5.478332 GGGATGAGAAATCTGTTGTTTTCCT 59.522 40.000 0.00 0.00 34.25 3.36
3573 4373 2.959030 TCTCTCTCTCTCTCTCTCTCGG 59.041 54.545 0.00 0.00 0.00 4.63
4036 4836 9.381033 CTCTCTCTCTCATGTTTGAATATGTTT 57.619 33.333 0.00 0.00 0.00 2.83
4037 4837 8.756927 TCTCTCTCTCTCATGTTTGAATATGTT 58.243 33.333 0.00 0.00 0.00 2.71
4038 4838 8.303780 TCTCTCTCTCTCATGTTTGAATATGT 57.696 34.615 0.00 0.00 0.00 2.29
4039 4839 7.868922 CCTCTCTCTCTCTCATGTTTGAATATG 59.131 40.741 0.00 0.00 0.00 1.78
4040 4840 7.015487 CCCTCTCTCTCTCTCATGTTTGAATAT 59.985 40.741 0.00 0.00 0.00 1.28
4041 4841 6.323482 CCCTCTCTCTCTCTCATGTTTGAATA 59.677 42.308 0.00 0.00 0.00 1.75
4042 4842 5.129155 CCCTCTCTCTCTCTCATGTTTGAAT 59.871 44.000 0.00 0.00 0.00 2.57
4043 4843 4.465660 CCCTCTCTCTCTCTCATGTTTGAA 59.534 45.833 0.00 0.00 0.00 2.69
4044 4844 4.022603 CCCTCTCTCTCTCTCATGTTTGA 58.977 47.826 0.00 0.00 0.00 2.69
4045 4845 4.022603 TCCCTCTCTCTCTCTCATGTTTG 58.977 47.826 0.00 0.00 0.00 2.93
4046 4846 4.280819 CTCCCTCTCTCTCTCTCATGTTT 58.719 47.826 0.00 0.00 0.00 2.83
4047 4847 3.373001 CCTCCCTCTCTCTCTCTCATGTT 60.373 52.174 0.00 0.00 0.00 2.71
4048 4848 2.175499 CCTCCCTCTCTCTCTCTCATGT 59.825 54.545 0.00 0.00 0.00 3.21
4049 4849 2.489619 CCCTCCCTCTCTCTCTCTCATG 60.490 59.091 0.00 0.00 0.00 3.07
4050 4850 1.782752 CCCTCCCTCTCTCTCTCTCAT 59.217 57.143 0.00 0.00 0.00 2.90
4051 4851 1.221635 CCCTCCCTCTCTCTCTCTCA 58.778 60.000 0.00 0.00 0.00 3.27
4052 4852 1.421646 CTCCCTCCCTCTCTCTCTCTC 59.578 61.905 0.00 0.00 0.00 3.20
4053 4853 1.522900 CTCCCTCCCTCTCTCTCTCT 58.477 60.000 0.00 0.00 0.00 3.10
4054 4854 0.478507 CCTCCCTCCCTCTCTCTCTC 59.521 65.000 0.00 0.00 0.00 3.20
4055 4855 0.998945 CCCTCCCTCCCTCTCTCTCT 60.999 65.000 0.00 0.00 0.00 3.10
4056 4856 0.996762 TCCCTCCCTCCCTCTCTCTC 60.997 65.000 0.00 0.00 0.00 3.20
4057 4857 0.998945 CTCCCTCCCTCCCTCTCTCT 60.999 65.000 0.00 0.00 0.00 3.10
4058 4858 1.541672 CTCCCTCCCTCCCTCTCTC 59.458 68.421 0.00 0.00 0.00 3.20
4061 4861 3.039526 CCCTCCCTCCCTCCCTCT 61.040 72.222 0.00 0.00 0.00 3.69
4065 4865 4.179599 CCCTCCCTCCCTCCCTCC 62.180 77.778 0.00 0.00 0.00 4.30
4089 4889 2.204624 TCTCCCTCCCTCCTCCCA 60.205 66.667 0.00 0.00 0.00 4.37
4094 4894 1.491668 GTCTTTCTCTCCCTCCCTCC 58.508 60.000 0.00 0.00 0.00 4.30
4098 4898 0.973496 AGGCGTCTTTCTCTCCCTCC 60.973 60.000 0.00 0.00 0.00 4.30
4109 4909 7.990886 TGAATATGTTTAATCCTAAGGCGTCTT 59.009 33.333 7.72 7.72 37.03 3.01
4140 4940 7.481798 GTGTTCACACAAAACAAAACAAAAACA 59.518 29.630 5.16 0.00 45.75 2.83
4177 4977 4.821589 CTTCTCACCCTCGCCGGC 62.822 72.222 19.07 19.07 0.00 6.13
4187 4987 1.539280 GCCGCTTATCCTCCTTCTCAC 60.539 57.143 0.00 0.00 0.00 3.51
4212 5012 9.809096 TTTTATTTTTGCGAGGCATCATATTTA 57.191 25.926 0.00 0.00 38.76 1.40
4260 5060 0.825840 AACCCAACAACCATCACCCG 60.826 55.000 0.00 0.00 0.00 5.28
4277 5077 8.827677 AGAGAAAACATAACACACACTCTTAAC 58.172 33.333 0.00 0.00 0.00 2.01
4336 5136 8.370940 TGCTGGGAGAGATTACAAGATTATTAG 58.629 37.037 0.00 0.00 0.00 1.73
4348 5148 1.500474 CTGGGTGCTGGGAGAGATTA 58.500 55.000 0.00 0.00 0.00 1.75
4357 5157 4.828296 GGATGGGCTGGGTGCTGG 62.828 72.222 0.00 0.00 42.39 4.85
4358 5158 4.828296 GGGATGGGCTGGGTGCTG 62.828 72.222 0.00 0.00 42.39 4.41
4365 5165 4.489771 GTGGGTCGGGATGGGCTG 62.490 72.222 0.00 0.00 0.00 4.85
4367 5167 4.489771 CTGTGGGTCGGGATGGGC 62.490 72.222 0.00 0.00 0.00 5.36
4368 5168 4.489771 GCTGTGGGTCGGGATGGG 62.490 72.222 0.00 0.00 0.00 4.00
4369 5169 4.838152 CGCTGTGGGTCGGGATGG 62.838 72.222 0.00 0.00 0.00 3.51
4376 5176 4.996434 AGTGCTGCGCTGTGGGTC 62.996 66.667 15.93 0.00 0.00 4.46
4408 5208 1.273886 GTGAGAAGAAAGAGGCGAGGT 59.726 52.381 0.00 0.00 0.00 3.85
4412 5212 2.169832 TTGGTGAGAAGAAAGAGGCG 57.830 50.000 0.00 0.00 0.00 5.52
4455 5255 2.754254 GGGGGCCAACACGGAATC 60.754 66.667 4.39 0.00 36.56 2.52
4456 5256 2.664835 TTTGGGGGCCAACACGGAAT 62.665 55.000 4.39 0.00 43.82 3.01
4459 5263 1.763546 AAATTTGGGGGCCAACACGG 61.764 55.000 4.39 0.00 43.82 4.94
4464 5268 2.158081 ACCTAAGAAATTTGGGGGCCAA 60.158 45.455 4.39 0.00 42.29 4.52
4579 5396 2.038659 CAGTTTTTGGGAGGCTGGAAA 58.961 47.619 0.00 0.00 0.00 3.13
4663 5490 4.938226 GTCAATAGAGGACCCAGAAAACTG 59.062 45.833 0.00 0.00 0.00 3.16
4677 5504 6.753897 GGCAACAAACAAAAGTCAATAGAG 57.246 37.500 0.00 0.00 0.00 2.43
4697 5524 3.891366 TCAGAGAGTCGATATGATTGGCA 59.109 43.478 0.00 0.00 0.00 4.92
4709 5536 1.728971 GCACACCAAATCAGAGAGTCG 59.271 52.381 0.00 0.00 0.00 4.18
4732 5638 3.468326 TAACTGCAGCGCCCACACA 62.468 57.895 15.27 0.00 0.00 3.72
4737 5643 1.026718 ACAATCTAACTGCAGCGCCC 61.027 55.000 15.27 0.00 0.00 6.13
5135 6397 1.305201 TGTCTTGTTTTCTCCCGTGC 58.695 50.000 0.00 0.00 0.00 5.34
5140 6402 2.612212 TCGCTGTTGTCTTGTTTTCTCC 59.388 45.455 0.00 0.00 0.00 3.71
5246 6523 8.708742 CATCACAGTTCTTCATTACTTTCGTAA 58.291 33.333 0.00 0.00 39.73 3.18
5292 6577 7.093988 TGTGATTATTGGTAAAACAGGACCATG 60.094 37.037 0.00 0.00 45.09 3.66
5360 6685 5.248640 AGCCAATCCATCAAATATACGAGG 58.751 41.667 0.00 0.00 0.00 4.63
5361 6686 6.128172 GGAAGCCAATCCATCAAATATACGAG 60.128 42.308 0.00 0.00 39.42 4.18
5364 6689 5.185828 GGGGAAGCCAATCCATCAAATATAC 59.814 44.000 3.50 0.00 41.55 1.47
5465 6796 4.037858 AGATCGAAATGCTGCAATTTCC 57.962 40.909 21.04 13.11 41.52 3.13
5588 6924 1.427368 TGGCCCCAAACTATGTTGAGT 59.573 47.619 0.00 0.00 0.00 3.41
5615 6954 2.398498 CAGTTGACGAGGTCTGTTGAG 58.602 52.381 0.00 0.00 33.15 3.02
5729 7068 4.932146 TGACACCAGTGTATATGATGACG 58.068 43.478 2.85 0.00 45.05 4.35
5835 7174 3.737559 TTGGATCACTGGGTTATTGCT 57.262 42.857 0.00 0.00 0.00 3.91
6101 7455 2.306805 TGGGATTGCTGAAGACATGTCT 59.693 45.455 22.89 22.89 42.75 3.41
6161 7515 3.953712 ATCACATACACGTCTTCACCA 57.046 42.857 0.00 0.00 0.00 4.17
6176 7533 6.823286 TTGAGATCATAAACCCCTATCACA 57.177 37.500 0.00 0.00 0.00 3.58
6572 7986 2.573915 CCCCCTTCTTCAGCTCTAGTTT 59.426 50.000 0.00 0.00 0.00 2.66
6633 8049 5.969435 GGTAAGAACGTTTGTGAAAAGGAAG 59.031 40.000 0.46 0.00 0.00 3.46
6734 8165 7.552687 ACACACAAAACACCTCCATATGTATAG 59.447 37.037 1.24 0.00 0.00 1.31
6892 8384 1.033746 CATCCGCTTCCTGGCAATGT 61.034 55.000 0.00 0.00 0.00 2.71
6900 8392 2.109799 CCGATGCATCCGCTTCCT 59.890 61.111 20.87 0.00 38.72 3.36
6927 8419 2.034124 CAAGTCCAAATGGCCCTATGG 58.966 52.381 0.00 5.80 34.44 2.74
7071 8608 4.993584 CCAGACATCAATAGATACAGGCAC 59.006 45.833 0.00 0.00 31.88 5.01
7075 8614 7.295322 TCCTTCCAGACATCAATAGATACAG 57.705 40.000 0.00 0.00 31.88 2.74
7239 8786 4.196193 ACAGGAGAAATGACACGAAAACA 58.804 39.130 0.00 0.00 0.00 2.83
7455 9116 0.911045 TCATGCTCCAAGCCCTGAGA 60.911 55.000 0.00 0.00 41.51 3.27
7478 9139 2.031560 TGTTAAACGCTCACTTGTGCTG 59.968 45.455 2.13 0.00 32.84 4.41
7582 9243 9.081997 GTCTACTTCATGACTCTAGTTCAAATG 57.918 37.037 3.21 0.00 0.00 2.32
7637 9298 6.834168 TGGTTCTGTTCTTATTCCAAATCC 57.166 37.500 0.00 0.00 0.00 3.01
7713 9376 9.897744 CAGAAGATGTAAAAGCAGTGATTAAAA 57.102 29.630 0.00 0.00 0.00 1.52
7714 9377 8.023128 GCAGAAGATGTAAAAGCAGTGATTAAA 58.977 33.333 0.00 0.00 0.00 1.52
7725 9388 5.491982 ACTAGTGGGCAGAAGATGTAAAAG 58.508 41.667 0.00 0.00 0.00 2.27
8017 9707 4.119136 CGAAAGAGCACAAAAATTTGGGT 58.881 39.130 9.67 4.79 43.39 4.51
8177 9896 4.435651 GCTTACATGCGGAAAGACTACAAC 60.436 45.833 0.00 0.00 0.00 3.32
8258 10152 2.423577 ACCGCCAGATGAACAGTAAAC 58.576 47.619 0.00 0.00 0.00 2.01
8329 10233 5.948742 TTTGGTCCCTCAAGTTTCAAAAT 57.051 34.783 0.00 0.00 0.00 1.82
8366 10270 5.826643 AGTCTAGACTTGGTCTCTCAAGAT 58.173 41.667 20.00 0.00 44.98 2.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.