Multiple sequence alignment - TraesCS5B01G556300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G556300 chr5B 100.000 3833 0 0 1 3833 704914264 704918096 0.000000e+00 7079.0
1 TraesCS5B01G556300 chr5B 85.799 169 13 7 3166 3332 46768866 46769025 6.590000e-38 169.0
2 TraesCS5B01G556300 chr5B 86.747 83 11 0 2252 2334 266501783 266501865 4.080000e-15 93.5
3 TraesCS5B01G556300 chr5B 82.828 99 17 0 2251 2349 402751170 402751072 5.270000e-14 89.8
4 TraesCS5B01G556300 chr4A 91.994 1449 73 18 1 1438 610264031 610262615 0.000000e+00 1993.0
5 TraesCS5B01G556300 chr4A 92.186 1139 63 14 2146 3273 610262363 610261240 0.000000e+00 1587.0
6 TraesCS5B01G556300 chr5D 89.310 1160 74 21 5 1145 557776145 557777273 0.000000e+00 1410.0
7 TraesCS5B01G556300 chr5D 92.060 869 57 7 2142 3009 557777789 557778646 0.000000e+00 1212.0
8 TraesCS5B01G556300 chr5D 92.848 825 45 8 3013 3833 557780009 557780823 0.000000e+00 1184.0
9 TraesCS5B01G556300 chr5D 96.255 267 4 6 1185 1446 557777269 557777534 2.120000e-117 433.0
10 TraesCS5B01G556300 chr5D 83.838 99 16 0 2251 2349 342712641 342712543 1.130000e-15 95.3
11 TraesCS5B01G556300 chr5D 84.211 95 15 0 2255 2349 238557411 238557317 4.080000e-15 93.5
12 TraesCS5B01G556300 chrUn 86.982 169 15 4 3164 3332 96464811 96464972 2.350000e-42 183.0
13 TraesCS5B01G556300 chrUn 85.207 169 18 4 3164 3332 311695275 311695436 2.370000e-37 167.0
14 TraesCS5B01G556300 chr6B 86.628 172 15 5 3164 3335 177054464 177054301 2.350000e-42 183.0
15 TraesCS5B01G556300 chr6B 82.011 189 27 6 127 313 618130967 618131150 1.840000e-33 154.0
16 TraesCS5B01G556300 chr6B 81.579 190 27 7 124 311 40492830 40492647 2.390000e-32 150.0
17 TraesCS5B01G556300 chr6B 81.152 191 28 7 123 311 634983168 634982984 3.090000e-31 147.0
18 TraesCS5B01G556300 chr1D 86.391 169 16 4 3164 3332 118824271 118824110 1.090000e-40 178.0
19 TraesCS5B01G556300 chr1B 84.971 173 18 5 3164 3335 174839817 174839982 6.590000e-38 169.0
20 TraesCS5B01G556300 chr6A 85.207 169 18 4 3164 3332 27171257 27171418 2.370000e-37 167.0
21 TraesCS5B01G556300 chr2B 82.162 185 27 5 128 311 53045768 53045589 1.840000e-33 154.0
22 TraesCS5B01G556300 chr3A 81.915 188 27 6 126 311 660056314 660056132 6.630000e-33 152.0
23 TraesCS5B01G556300 chr1A 81.579 190 27 7 125 311 531882062 531881878 2.390000e-32 150.0
24 TraesCS5B01G556300 chr1A 80.488 164 12 12 1847 2006 372174660 372174513 1.460000e-19 108.0
25 TraesCS5B01G556300 chr7D 81.122 196 28 8 120 311 154207197 154207387 8.580000e-32 148.0
26 TraesCS5B01G556300 chr5A 86.364 88 12 0 2247 2334 316085395 316085482 3.150000e-16 97.1
27 TraesCS5B01G556300 chr2D 88.608 79 9 0 2251 2329 108313428 108313506 3.150000e-16 97.1
28 TraesCS5B01G556300 chr2D 90.196 51 1 4 1469 1517 2149516 2149564 3.200000e-06 63.9
29 TraesCS5B01G556300 chr2A 88.608 79 9 0 2251 2329 104450754 104450832 3.150000e-16 97.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G556300 chr5B 704914264 704918096 3832 False 7079.00 7079 100.00000 1 3833 1 chr5B.!!$F3 3832
1 TraesCS5B01G556300 chr4A 610261240 610264031 2791 True 1790.00 1993 92.09000 1 3273 2 chr4A.!!$R1 3272
2 TraesCS5B01G556300 chr5D 557776145 557780823 4678 False 1059.75 1410 92.61825 5 3833 4 chr5D.!!$F1 3828

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
837 865 0.032416 TACTGGGTAGCAGGGGAGAC 60.032 60.0 0.0 0.0 0.0 3.36 F
1839 1926 0.037326 TCAATCCCAGACGCACTCAC 60.037 55.0 0.0 0.0 0.0 3.51 F
1935 2022 0.028110 GCCGCTCCAACAAATCGATC 59.972 55.0 0.0 0.0 0.0 3.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1916 2003 0.028110 GATCGATTTGTTGGAGCGGC 59.972 55.0 0.00 0.0 0.0 6.53 R
2645 2734 0.883833 GTGGCCACTGGTCATTGAAG 59.116 55.0 29.12 0.0 40.4 3.02 R
3699 5155 0.894835 TATTGACGACTCAGCTGGCA 59.105 50.0 15.13 0.0 0.0 4.92 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
52 55 7.087007 GGTCTAGAAAGAAAAAGATGCCAAAG 58.913 38.462 0.00 0.00 32.16 2.77
54 57 7.805542 GTCTAGAAAGAAAAAGATGCCAAAGAC 59.194 37.037 0.00 0.00 32.16 3.01
61 64 2.698855 AGATGCCAAAGACGCTACAT 57.301 45.000 0.00 0.00 0.00 2.29
73 76 0.097499 CGCTACATGTACGGACGACA 59.903 55.000 15.62 0.00 0.00 4.35
88 91 3.553105 GGACGACATTGTACGGGATTAAC 59.447 47.826 11.45 0.00 0.00 2.01
95 98 2.386779 TGTACGGGATTAACGGATGGA 58.613 47.619 0.00 0.00 35.23 3.41
99 102 2.159000 ACGGGATTAACGGATGGACTTC 60.159 50.000 0.00 0.00 35.23 3.01
101 104 2.438392 GGGATTAACGGATGGACTTCCT 59.562 50.000 0.00 0.00 36.82 3.36
109 112 2.746472 CGGATGGACTTCCTTGGGATTC 60.746 54.545 0.00 0.00 36.82 2.52
155 174 1.002468 CTACACGTACGGGGGATTACG 60.002 57.143 23.48 0.00 45.27 3.18
157 176 4.715983 CGTACGGGGGATTACGTG 57.284 61.111 7.57 0.00 43.93 4.49
158 177 2.105984 CGTACGGGGGATTACGTGA 58.894 57.895 7.57 0.00 43.93 4.35
159 178 0.670162 CGTACGGGGGATTACGTGAT 59.330 55.000 7.57 0.00 43.93 3.06
160 179 1.601162 CGTACGGGGGATTACGTGATG 60.601 57.143 7.57 0.00 43.93 3.07
161 180 1.682854 GTACGGGGGATTACGTGATGA 59.317 52.381 0.00 0.00 43.93 2.92
162 181 0.750850 ACGGGGGATTACGTGATGAG 59.249 55.000 0.00 0.00 42.39 2.90
163 182 0.033504 CGGGGGATTACGTGATGAGG 59.966 60.000 0.00 0.00 0.00 3.86
164 183 0.396811 GGGGGATTACGTGATGAGGG 59.603 60.000 0.00 0.00 0.00 4.30
165 184 0.396811 GGGGATTACGTGATGAGGGG 59.603 60.000 0.00 0.00 0.00 4.79
166 185 1.420430 GGGATTACGTGATGAGGGGA 58.580 55.000 0.00 0.00 0.00 4.81
167 186 1.978580 GGGATTACGTGATGAGGGGAT 59.021 52.381 0.00 0.00 0.00 3.85
168 187 2.372172 GGGATTACGTGATGAGGGGATT 59.628 50.000 0.00 0.00 0.00 3.01
169 188 3.581332 GGGATTACGTGATGAGGGGATTA 59.419 47.826 0.00 0.00 0.00 1.75
170 189 4.322801 GGGATTACGTGATGAGGGGATTAG 60.323 50.000 0.00 0.00 0.00 1.73
180 199 4.295905 TGAGGGGATTAGAGGGTGTTAT 57.704 45.455 0.00 0.00 0.00 1.89
194 213 8.110860 AGAGGGTGTTATGACAGTTTTTAATG 57.889 34.615 0.00 0.00 36.20 1.90
246 269 0.033208 TGAATTCAGGTGGGGGATGC 60.033 55.000 3.38 0.00 0.00 3.91
263 286 4.567747 GGGATGCTTAGGAAGTTTGGAAGA 60.568 45.833 0.00 0.00 0.00 2.87
264 287 5.196695 GGATGCTTAGGAAGTTTGGAAGAT 58.803 41.667 0.00 0.00 0.00 2.40
269 292 2.800250 AGGAAGTTTGGAAGATGGCTG 58.200 47.619 0.00 0.00 0.00 4.85
270 293 2.108952 AGGAAGTTTGGAAGATGGCTGT 59.891 45.455 0.00 0.00 0.00 4.40
271 294 3.330701 AGGAAGTTTGGAAGATGGCTGTA 59.669 43.478 0.00 0.00 0.00 2.74
276 299 4.532521 AGTTTGGAAGATGGCTGTAGTAGT 59.467 41.667 0.00 0.00 0.00 2.73
281 304 4.082679 GGAAGATGGCTGTAGTAGTATCCG 60.083 50.000 0.00 0.00 0.00 4.18
328 351 6.594788 TTTTTGATGAAAATCAGGGGAGAG 57.405 37.500 0.00 0.00 32.44 3.20
353 376 5.048154 AGACTAGTGAAGAAGGTTCCGTAAC 60.048 44.000 0.00 0.00 34.66 2.50
393 416 4.779523 CGTAAGTGTACGTAGCATTTTTGC 59.220 41.667 0.00 0.00 46.49 3.68
395 418 3.142951 AGTGTACGTAGCATTTTTGCCA 58.857 40.909 0.00 0.00 34.90 4.92
476 499 3.010472 TCAATGCCCAAGAAATCAGGAGA 59.990 43.478 0.00 0.00 0.00 3.71
483 506 4.505566 CCCAAGAAATCAGGAGAGAACACA 60.506 45.833 0.00 0.00 0.00 3.72
486 509 4.892433 AGAAATCAGGAGAGAACACACAG 58.108 43.478 0.00 0.00 0.00 3.66
515 538 1.001764 CCCTTCATGAGCACCAGCA 60.002 57.895 0.00 0.00 45.49 4.41
525 548 1.300388 GCACCAGCAGCACAAAAGG 60.300 57.895 0.00 0.00 41.58 3.11
552 575 3.513119 CCAGAGAAAGAGACAGATGGACA 59.487 47.826 0.00 0.00 0.00 4.02
559 582 4.213564 AGAGACAGATGGACAATTGGTC 57.786 45.455 10.83 5.59 46.20 4.02
620 643 3.126073 GGAAAAGCAAGGCAAAGTTCAG 58.874 45.455 0.00 0.00 0.00 3.02
621 644 2.229675 AAAGCAAGGCAAAGTTCAGC 57.770 45.000 0.00 0.00 0.00 4.26
713 737 1.618487 TGCATCATGGAAAGCACACA 58.382 45.000 0.00 0.00 31.05 3.72
724 748 1.103398 AAGCACACAAGCACAGGGAC 61.103 55.000 0.00 0.00 36.85 4.46
777 801 4.391869 CTGAGGAAAGCAGCAGCA 57.608 55.556 3.17 0.00 45.49 4.41
778 802 2.172534 CTGAGGAAAGCAGCAGCAG 58.827 57.895 3.17 0.00 45.49 4.24
779 803 1.924320 CTGAGGAAAGCAGCAGCAGC 61.924 60.000 3.17 0.46 45.49 5.25
818 846 7.905144 TGGGGTCTCCAATAAAAGGATATAT 57.095 36.000 0.00 0.00 43.84 0.86
819 847 8.998957 TGGGGTCTCCAATAAAAGGATATATA 57.001 34.615 0.00 0.00 43.84 0.86
820 848 8.832735 TGGGGTCTCCAATAAAAGGATATATAC 58.167 37.037 0.00 0.00 43.84 1.47
821 849 9.059023 GGGGTCTCCAATAAAAGGATATATACT 57.941 37.037 0.00 0.00 33.99 2.12
822 850 9.892130 GGGTCTCCAATAAAAGGATATATACTG 57.108 37.037 0.00 0.00 33.99 2.74
823 851 9.892130 GGTCTCCAATAAAAGGATATATACTGG 57.108 37.037 0.00 0.00 33.99 4.00
824 852 9.892130 GTCTCCAATAAAAGGATATATACTGGG 57.108 37.037 0.00 0.00 33.99 4.45
825 853 9.629649 TCTCCAATAAAAGGATATATACTGGGT 57.370 33.333 0.00 0.00 33.99 4.51
828 856 9.614792 CCAATAAAAGGATATATACTGGGTAGC 57.385 37.037 0.00 0.00 0.00 3.58
837 865 0.032416 TACTGGGTAGCAGGGGAGAC 60.032 60.000 0.00 0.00 0.00 3.36
946 975 4.978083 ATCACAACGTACCTAGGTACTG 57.022 45.455 37.24 32.23 46.22 2.74
961 996 7.501892 ACCTAGGTACTGTTCAACTAGCTATAC 59.498 40.741 14.41 0.00 41.52 1.47
992 1027 5.126067 CCTAGCTATATTATTTGGCGGCAT 58.874 41.667 14.32 0.14 0.00 4.40
1029 1064 2.103538 CCATGCTGCGACAATGGC 59.896 61.111 4.07 0.00 0.00 4.40
1059 1094 1.139498 TGAAGAAGGGGCCATGGACA 61.139 55.000 22.13 0.00 0.00 4.02
1062 1097 3.662117 GAAGGGGCCATGGACACCC 62.662 68.421 19.07 22.62 43.69 4.61
1177 1212 4.152402 CCCACATGCGCTTTCAGTATATAC 59.848 45.833 9.73 4.60 0.00 1.47
1184 1219 5.221441 TGCGCTTTCAGTATATACATCCACT 60.221 40.000 15.18 0.00 0.00 4.00
1439 1478 7.776969 ACAAGTAAGCATATGTCCATCTTGAAT 59.223 33.333 22.81 9.64 35.34 2.57
1441 1480 7.512130 AGTAAGCATATGTCCATCTTGAATGA 58.488 34.615 4.29 0.00 0.00 2.57
1446 1485 4.913335 ATGTCCATCTTGAATGATGTGC 57.087 40.909 0.00 0.00 41.47 4.57
1447 1486 3.018856 TGTCCATCTTGAATGATGTGCC 58.981 45.455 0.00 0.00 41.47 5.01
1448 1487 3.018856 GTCCATCTTGAATGATGTGCCA 58.981 45.455 0.00 0.00 41.47 4.92
1449 1488 3.066342 GTCCATCTTGAATGATGTGCCAG 59.934 47.826 0.00 0.00 41.47 4.85
1450 1489 2.223735 CCATCTTGAATGATGTGCCAGC 60.224 50.000 0.00 0.00 41.47 4.85
1451 1490 2.502142 TCTTGAATGATGTGCCAGCT 57.498 45.000 0.00 0.00 0.00 4.24
1452 1491 3.632643 TCTTGAATGATGTGCCAGCTA 57.367 42.857 0.00 0.00 0.00 3.32
1453 1492 4.160642 TCTTGAATGATGTGCCAGCTAT 57.839 40.909 0.00 0.00 0.00 2.97
1454 1493 5.294734 TCTTGAATGATGTGCCAGCTATA 57.705 39.130 0.00 0.00 0.00 1.31
1455 1494 5.059161 TCTTGAATGATGTGCCAGCTATAC 58.941 41.667 0.00 0.00 0.00 1.47
1456 1495 4.694760 TGAATGATGTGCCAGCTATACT 57.305 40.909 0.00 0.00 0.00 2.12
1457 1496 5.039920 TGAATGATGTGCCAGCTATACTT 57.960 39.130 0.00 0.00 0.00 2.24
1458 1497 6.173427 TGAATGATGTGCCAGCTATACTTA 57.827 37.500 0.00 0.00 0.00 2.24
1459 1498 6.772605 TGAATGATGTGCCAGCTATACTTAT 58.227 36.000 0.00 0.00 0.00 1.73
1460 1499 7.226441 TGAATGATGTGCCAGCTATACTTATT 58.774 34.615 0.00 0.00 0.00 1.40
1461 1500 7.173735 TGAATGATGTGCCAGCTATACTTATTG 59.826 37.037 0.00 0.00 0.00 1.90
1462 1501 6.173427 TGATGTGCCAGCTATACTTATTGA 57.827 37.500 0.00 0.00 0.00 2.57
1463 1502 6.226052 TGATGTGCCAGCTATACTTATTGAG 58.774 40.000 0.00 0.00 0.00 3.02
1464 1503 5.869649 TGTGCCAGCTATACTTATTGAGA 57.130 39.130 0.00 0.00 0.00 3.27
1465 1504 5.847304 TGTGCCAGCTATACTTATTGAGAG 58.153 41.667 0.00 0.00 0.00 3.20
1466 1505 5.598417 TGTGCCAGCTATACTTATTGAGAGA 59.402 40.000 0.00 0.00 0.00 3.10
1467 1506 5.923684 GTGCCAGCTATACTTATTGAGAGAC 59.076 44.000 0.00 0.00 0.00 3.36
1468 1507 5.598417 TGCCAGCTATACTTATTGAGAGACA 59.402 40.000 0.00 0.00 0.00 3.41
1469 1508 6.268617 TGCCAGCTATACTTATTGAGAGACAT 59.731 38.462 0.00 0.00 0.00 3.06
1470 1509 6.811170 GCCAGCTATACTTATTGAGAGACATC 59.189 42.308 0.00 0.00 0.00 3.06
1471 1510 7.309744 GCCAGCTATACTTATTGAGAGACATCT 60.310 40.741 0.00 0.00 38.98 2.90
1485 1524 5.731599 GAGACATCTCGATGCTTCAATTT 57.268 39.130 6.81 0.00 42.39 1.82
1486 1525 5.481200 AGACATCTCGATGCTTCAATTTG 57.519 39.130 6.81 0.00 42.39 2.32
1487 1526 5.181009 AGACATCTCGATGCTTCAATTTGA 58.819 37.500 6.81 0.00 42.39 2.69
1488 1527 5.293814 AGACATCTCGATGCTTCAATTTGAG 59.706 40.000 6.81 0.00 42.39 3.02
1489 1528 4.201891 ACATCTCGATGCTTCAATTTGAGC 60.202 41.667 6.81 11.53 42.39 4.26
1490 1529 2.679837 TCTCGATGCTTCAATTTGAGCC 59.320 45.455 14.24 5.38 0.00 4.70
1491 1530 2.421073 CTCGATGCTTCAATTTGAGCCA 59.579 45.455 14.24 9.63 0.00 4.75
1492 1531 2.819019 TCGATGCTTCAATTTGAGCCAA 59.181 40.909 14.24 0.00 0.00 4.52
1493 1532 3.444742 TCGATGCTTCAATTTGAGCCAAT 59.555 39.130 14.24 6.13 0.00 3.16
1494 1533 4.639755 TCGATGCTTCAATTTGAGCCAATA 59.360 37.500 14.24 1.93 0.00 1.90
1495 1534 5.125257 TCGATGCTTCAATTTGAGCCAATAA 59.875 36.000 14.24 1.67 0.00 1.40
1496 1535 5.806502 CGATGCTTCAATTTGAGCCAATAAA 59.193 36.000 14.24 0.00 0.00 1.40
1497 1536 6.310956 CGATGCTTCAATTTGAGCCAATAAAA 59.689 34.615 14.24 0.00 0.00 1.52
1498 1537 7.010738 CGATGCTTCAATTTGAGCCAATAAAAT 59.989 33.333 14.24 4.16 0.00 1.82
1499 1538 7.982761 TGCTTCAATTTGAGCCAATAAAATT 57.017 28.000 14.24 0.00 34.63 1.82
1500 1539 8.031848 TGCTTCAATTTGAGCCAATAAAATTC 57.968 30.769 14.24 0.00 32.58 2.17
1501 1540 7.660617 TGCTTCAATTTGAGCCAATAAAATTCA 59.339 29.630 14.24 0.00 32.58 2.57
1502 1541 8.173130 GCTTCAATTTGAGCCAATAAAATTCAG 58.827 33.333 0.00 0.00 32.58 3.02
1503 1542 7.599630 TCAATTTGAGCCAATAAAATTCAGC 57.400 32.000 0.00 0.00 32.58 4.26
1504 1543 7.388437 TCAATTTGAGCCAATAAAATTCAGCT 58.612 30.769 0.00 0.00 32.58 4.24
1505 1544 7.879160 TCAATTTGAGCCAATAAAATTCAGCTT 59.121 29.630 0.00 0.00 32.58 3.74
1506 1545 8.508875 CAATTTGAGCCAATAAAATTCAGCTTT 58.491 29.630 0.00 0.00 32.58 3.51
1507 1546 8.625786 ATTTGAGCCAATAAAATTCAGCTTTT 57.374 26.923 0.00 0.00 33.17 2.27
1508 1547 7.424227 TTGAGCCAATAAAATTCAGCTTTTG 57.576 32.000 0.00 0.00 31.15 2.44
1509 1548 6.523840 TGAGCCAATAAAATTCAGCTTTTGT 58.476 32.000 0.00 0.00 31.15 2.83
1510 1549 6.646240 TGAGCCAATAAAATTCAGCTTTTGTC 59.354 34.615 0.00 0.00 31.15 3.18
1511 1550 5.634859 AGCCAATAAAATTCAGCTTTTGTCG 59.365 36.000 0.00 0.00 31.15 4.35
1512 1551 5.163963 GCCAATAAAATTCAGCTTTTGTCGG 60.164 40.000 0.00 0.00 31.15 4.79
1513 1552 6.155827 CCAATAAAATTCAGCTTTTGTCGGA 58.844 36.000 0.00 0.00 31.15 4.55
1514 1553 6.644592 CCAATAAAATTCAGCTTTTGTCGGAA 59.355 34.615 0.00 0.00 31.15 4.30
1515 1554 7.170658 CCAATAAAATTCAGCTTTTGTCGGAAA 59.829 33.333 0.00 0.00 31.15 3.13
1516 1555 8.547069 CAATAAAATTCAGCTTTTGTCGGAAAA 58.453 29.630 0.00 0.00 31.15 2.29
1517 1556 6.976636 AAAATTCAGCTTTTGTCGGAAAAA 57.023 29.167 0.00 0.00 0.00 1.94
1541 1580 6.403866 AAGCTATACTGAGAGACAATCCTG 57.596 41.667 0.00 0.00 0.00 3.86
1543 1582 5.769662 AGCTATACTGAGAGACAATCCTGAG 59.230 44.000 0.00 0.00 0.00 3.35
1544 1583 5.048083 GCTATACTGAGAGACAATCCTGAGG 60.048 48.000 0.00 0.00 0.00 3.86
1545 1584 2.465813 ACTGAGAGACAATCCTGAGGG 58.534 52.381 0.00 0.00 0.00 4.30
1546 1585 1.138661 CTGAGAGACAATCCTGAGGGC 59.861 57.143 0.00 0.00 0.00 5.19
1547 1586 1.273495 TGAGAGACAATCCTGAGGGCT 60.273 52.381 0.00 0.00 0.00 5.19
1548 1587 1.836802 GAGAGACAATCCTGAGGGCTT 59.163 52.381 0.00 0.00 0.00 4.35
1550 1589 1.556911 GAGACAATCCTGAGGGCTTGA 59.443 52.381 17.67 0.00 40.14 3.02
1551 1590 1.988107 AGACAATCCTGAGGGCTTGAA 59.012 47.619 17.67 0.00 40.14 2.69
1552 1591 2.579860 AGACAATCCTGAGGGCTTGAAT 59.420 45.455 17.67 6.30 40.14 2.57
1554 1593 3.359950 ACAATCCTGAGGGCTTGAATTC 58.640 45.455 17.67 0.00 40.14 2.17
1571 1656 5.577835 TGAATTCGTTCACTTTGTTCCAAG 58.422 37.500 0.04 0.00 0.00 3.61
1587 1672 5.303333 TGTTCCAAGTAAAATCCTTTGGGTC 59.697 40.000 2.61 0.00 40.33 4.46
1615 1702 6.280643 AGGCAGTTTTGTTCTAAATTTCCAC 58.719 36.000 0.00 0.00 0.00 4.02
1627 1714 8.749354 GTTCTAAATTTCCACCTACCATCAAAT 58.251 33.333 0.00 0.00 0.00 2.32
1641 1728 5.648178 CCATCAAATGGTGTTGAATCAGA 57.352 39.130 0.00 0.00 45.54 3.27
1643 1730 6.636705 CCATCAAATGGTGTTGAATCAGATT 58.363 36.000 0.00 0.00 45.54 2.40
1644 1731 7.101054 CCATCAAATGGTGTTGAATCAGATTT 58.899 34.615 0.00 0.00 45.54 2.17
1645 1732 7.064134 CCATCAAATGGTGTTGAATCAGATTTG 59.936 37.037 0.00 0.00 45.54 2.32
1646 1733 7.287512 TCAAATGGTGTTGAATCAGATTTGA 57.712 32.000 0.00 0.00 36.32 2.69
1649 1736 5.648178 TGGTGTTGAATCAGATTTGATGG 57.352 39.130 0.00 0.00 43.20 3.51
1651 1738 5.539574 TGGTGTTGAATCAGATTTGATGGTT 59.460 36.000 0.00 0.00 43.20 3.67
1652 1739 6.041865 TGGTGTTGAATCAGATTTGATGGTTT 59.958 34.615 0.00 0.00 43.20 3.27
1653 1740 6.930722 GGTGTTGAATCAGATTTGATGGTTTT 59.069 34.615 0.00 0.00 43.20 2.43
1654 1741 7.116805 GGTGTTGAATCAGATTTGATGGTTTTC 59.883 37.037 0.00 0.00 43.20 2.29
1655 1742 7.869429 GTGTTGAATCAGATTTGATGGTTTTCT 59.131 33.333 0.00 0.00 43.20 2.52
1656 1743 7.868922 TGTTGAATCAGATTTGATGGTTTTCTG 59.131 33.333 0.00 0.00 43.20 3.02
1657 1744 6.392354 TGAATCAGATTTGATGGTTTTCTGC 58.608 36.000 0.00 0.00 43.20 4.26
1658 1745 4.424061 TCAGATTTGATGGTTTTCTGCG 57.576 40.909 0.00 0.00 35.03 5.18
1659 1746 4.071423 TCAGATTTGATGGTTTTCTGCGA 58.929 39.130 0.00 0.00 35.03 5.10
1662 1749 3.363341 TTTGATGGTTTTCTGCGAACC 57.637 42.857 0.00 0.00 45.39 3.62
1663 1750 2.270352 TGATGGTTTTCTGCGAACCT 57.730 45.000 7.45 0.00 45.39 3.50
1664 1751 3.410631 TGATGGTTTTCTGCGAACCTA 57.589 42.857 7.45 0.00 45.39 3.08
1665 1752 3.334691 TGATGGTTTTCTGCGAACCTAG 58.665 45.455 7.45 0.00 45.39 3.02
1666 1753 1.519408 TGGTTTTCTGCGAACCTAGC 58.481 50.000 7.45 0.00 45.39 3.42
1668 1755 0.442699 GTTTTCTGCGAACCTAGCCG 59.557 55.000 0.00 0.00 0.00 5.52
1678 1765 3.650139 CGAACCTAGCCGCAAATATAGT 58.350 45.455 0.00 0.00 0.00 2.12
1680 1767 5.224888 CGAACCTAGCCGCAAATATAGTAA 58.775 41.667 0.00 0.00 0.00 2.24
1683 1770 7.095355 CGAACCTAGCCGCAAATATAGTAATTT 60.095 37.037 0.00 0.00 0.00 1.82
1685 1772 8.459911 ACCTAGCCGCAAATATAGTAATTTTT 57.540 30.769 0.00 0.00 0.00 1.94
1686 1773 8.349983 ACCTAGCCGCAAATATAGTAATTTTTG 58.650 33.333 0.00 0.00 37.20 2.44
1688 1775 9.730420 CTAGCCGCAAATATAGTAATTTTTGTT 57.270 29.630 0.00 0.00 36.77 2.83
1689 1776 8.406172 AGCCGCAAATATAGTAATTTTTGTTG 57.594 30.769 0.00 0.00 36.77 3.33
1690 1777 7.491048 AGCCGCAAATATAGTAATTTTTGTTGG 59.509 33.333 0.00 0.00 36.77 3.77
1691 1778 7.254286 GCCGCAAATATAGTAATTTTTGTTGGG 60.254 37.037 10.63 0.00 36.77 4.12
1692 1779 7.254286 CCGCAAATATAGTAATTTTTGTTGGGC 60.254 37.037 0.00 0.00 36.77 5.36
1693 1780 7.276658 CGCAAATATAGTAATTTTTGTTGGGCA 59.723 33.333 0.00 0.00 36.77 5.36
1694 1781 8.603181 GCAAATATAGTAATTTTTGTTGGGCAG 58.397 33.333 0.00 0.00 36.77 4.85
1695 1782 8.603181 CAAATATAGTAATTTTTGTTGGGCAGC 58.397 33.333 0.00 0.00 32.51 5.25
1696 1783 7.660030 ATATAGTAATTTTTGTTGGGCAGCT 57.340 32.000 0.00 0.00 0.00 4.24
1697 1784 4.257267 AGTAATTTTTGTTGGGCAGCTC 57.743 40.909 0.00 0.00 0.00 4.09
1699 1786 3.391506 AATTTTTGTTGGGCAGCTCTC 57.608 42.857 0.00 0.00 0.00 3.20
1700 1787 1.039856 TTTTTGTTGGGCAGCTCTCC 58.960 50.000 0.00 0.00 0.00 3.71
1702 1789 1.719063 TTTGTTGGGCAGCTCTCCCT 61.719 55.000 18.67 0.00 44.23 4.20
1703 1790 2.129555 TTGTTGGGCAGCTCTCCCTC 62.130 60.000 18.67 12.99 44.23 4.30
1704 1791 2.123632 TTGGGCAGCTCTCCCTCT 59.876 61.111 18.67 0.00 44.23 3.69
1705 1792 1.992277 TTGGGCAGCTCTCCCTCTC 60.992 63.158 18.67 0.00 44.23 3.20
1706 1793 2.042025 GGGCAGCTCTCCCTCTCT 60.042 66.667 12.35 0.00 40.66 3.10
1708 1795 1.076044 GGCAGCTCTCCCTCTCTCT 60.076 63.158 0.00 0.00 0.00 3.10
1709 1796 1.109323 GGCAGCTCTCCCTCTCTCTC 61.109 65.000 0.00 0.00 0.00 3.20
1710 1797 1.109323 GCAGCTCTCCCTCTCTCTCC 61.109 65.000 0.00 0.00 0.00 3.71
1711 1798 0.819259 CAGCTCTCCCTCTCTCTCCG 60.819 65.000 0.00 0.00 0.00 4.63
1712 1799 1.528309 GCTCTCCCTCTCTCTCCGG 60.528 68.421 0.00 0.00 0.00 5.14
1714 1801 0.179029 CTCTCCCTCTCTCTCCGGAC 60.179 65.000 0.00 0.00 0.00 4.79
1716 1803 1.973816 CTCCCTCTCTCTCCGGACGA 61.974 65.000 0.00 1.23 0.00 4.20
1718 1805 1.098712 CCCTCTCTCTCCGGACGAAG 61.099 65.000 0.00 0.00 0.00 3.79
1720 1807 1.476110 CCTCTCTCTCCGGACGAAGAT 60.476 57.143 0.00 0.00 0.00 2.40
1721 1808 2.224329 CCTCTCTCTCCGGACGAAGATA 60.224 54.545 0.00 0.00 0.00 1.98
1722 1809 3.064207 CTCTCTCTCCGGACGAAGATAG 58.936 54.545 0.00 2.54 0.00 2.08
1724 1811 3.134262 TCTCTCTCCGGACGAAGATAGAA 59.866 47.826 0.00 0.00 0.00 2.10
1725 1812 3.468770 TCTCTCCGGACGAAGATAGAAG 58.531 50.000 0.00 0.00 0.00 2.85
1727 1814 3.878103 CTCTCCGGACGAAGATAGAAGAA 59.122 47.826 0.00 0.00 0.00 2.52
1728 1815 3.878103 TCTCCGGACGAAGATAGAAGAAG 59.122 47.826 0.00 0.00 0.00 2.85
1729 1816 2.358267 TCCGGACGAAGATAGAAGAAGC 59.642 50.000 0.00 0.00 0.00 3.86
1730 1817 2.099263 CCGGACGAAGATAGAAGAAGCA 59.901 50.000 0.00 0.00 0.00 3.91
1731 1818 3.109619 CGGACGAAGATAGAAGAAGCAC 58.890 50.000 0.00 0.00 0.00 4.40
1732 1819 3.427638 CGGACGAAGATAGAAGAAGCACA 60.428 47.826 0.00 0.00 0.00 4.57
1734 1821 4.381079 GGACGAAGATAGAAGAAGCACAGT 60.381 45.833 0.00 0.00 0.00 3.55
1735 1822 5.140747 ACGAAGATAGAAGAAGCACAGTT 57.859 39.130 0.00 0.00 0.00 3.16
1736 1823 5.542779 ACGAAGATAGAAGAAGCACAGTTT 58.457 37.500 0.00 0.00 0.00 2.66
1737 1824 5.992217 ACGAAGATAGAAGAAGCACAGTTTT 59.008 36.000 0.00 0.00 0.00 2.43
1738 1825 6.483640 ACGAAGATAGAAGAAGCACAGTTTTT 59.516 34.615 0.00 0.00 0.00 1.94
1740 1827 6.809630 AGATAGAAGAAGCACAGTTTTTCC 57.190 37.500 0.00 0.00 0.00 3.13
1741 1828 5.707764 AGATAGAAGAAGCACAGTTTTTCCC 59.292 40.000 0.00 0.00 0.00 3.97
1742 1829 2.618709 AGAAGAAGCACAGTTTTTCCCG 59.381 45.455 0.00 0.00 0.00 5.14
1743 1830 1.318576 AGAAGCACAGTTTTTCCCGG 58.681 50.000 0.00 0.00 0.00 5.73
1744 1831 0.318699 GAAGCACAGTTTTTCCCGGC 60.319 55.000 0.00 0.00 0.00 6.13
1745 1832 1.744320 AAGCACAGTTTTTCCCGGCC 61.744 55.000 0.00 0.00 0.00 6.13
1746 1833 2.642700 CACAGTTTTTCCCGGCCG 59.357 61.111 21.04 21.04 0.00 6.13
1747 1834 3.292159 ACAGTTTTTCCCGGCCGC 61.292 61.111 22.85 3.63 0.00 6.53
1748 1835 3.291383 CAGTTTTTCCCGGCCGCA 61.291 61.111 22.85 4.98 0.00 5.69
1749 1836 3.292159 AGTTTTTCCCGGCCGCAC 61.292 61.111 22.85 8.62 0.00 5.34
1750 1837 4.693525 GTTTTTCCCGGCCGCACG 62.694 66.667 22.85 9.42 0.00 5.34
1752 1839 3.821636 TTTTTCCCGGCCGCACGTA 62.822 57.895 22.85 0.75 0.00 3.57
1759 1846 4.692475 GGCCGCACGTACAACCCT 62.692 66.667 0.00 0.00 0.00 4.34
1760 1847 2.667199 GCCGCACGTACAACCCTT 60.667 61.111 0.00 0.00 0.00 3.95
1761 1848 2.255881 GCCGCACGTACAACCCTTT 61.256 57.895 0.00 0.00 0.00 3.11
1762 1849 1.864176 CCGCACGTACAACCCTTTC 59.136 57.895 0.00 0.00 0.00 2.62
1763 1850 0.601841 CCGCACGTACAACCCTTTCT 60.602 55.000 0.00 0.00 0.00 2.52
1764 1851 1.337074 CCGCACGTACAACCCTTTCTA 60.337 52.381 0.00 0.00 0.00 2.10
1765 1852 2.613691 CGCACGTACAACCCTTTCTAT 58.386 47.619 0.00 0.00 0.00 1.98
1766 1853 2.997986 CGCACGTACAACCCTTTCTATT 59.002 45.455 0.00 0.00 0.00 1.73
1767 1854 4.175516 CGCACGTACAACCCTTTCTATTA 58.824 43.478 0.00 0.00 0.00 0.98
1768 1855 4.626604 CGCACGTACAACCCTTTCTATTAA 59.373 41.667 0.00 0.00 0.00 1.40
1769 1856 5.292589 CGCACGTACAACCCTTTCTATTAAT 59.707 40.000 0.00 0.00 0.00 1.40
1770 1857 6.509039 CGCACGTACAACCCTTTCTATTAATC 60.509 42.308 0.00 0.00 0.00 1.75
1771 1858 6.537660 GCACGTACAACCCTTTCTATTAATCT 59.462 38.462 0.00 0.00 0.00 2.40
1772 1859 7.254353 GCACGTACAACCCTTTCTATTAATCTC 60.254 40.741 0.00 0.00 0.00 2.75
1773 1860 7.762615 CACGTACAACCCTTTCTATTAATCTCA 59.237 37.037 0.00 0.00 0.00 3.27
1774 1861 8.316214 ACGTACAACCCTTTCTATTAATCTCAA 58.684 33.333 0.00 0.00 0.00 3.02
1775 1862 9.158233 CGTACAACCCTTTCTATTAATCTCAAA 57.842 33.333 0.00 0.00 0.00 2.69
1778 1865 9.014297 ACAACCCTTTCTATTAATCTCAAACTG 57.986 33.333 0.00 0.00 0.00 3.16
1779 1866 8.462016 CAACCCTTTCTATTAATCTCAAACTGG 58.538 37.037 0.00 0.00 0.00 4.00
1780 1867 6.603599 ACCCTTTCTATTAATCTCAAACTGGC 59.396 38.462 0.00 0.00 0.00 4.85
1781 1868 6.830838 CCCTTTCTATTAATCTCAAACTGGCT 59.169 38.462 0.00 0.00 0.00 4.75
1782 1869 7.993183 CCCTTTCTATTAATCTCAAACTGGCTA 59.007 37.037 0.00 0.00 0.00 3.93
1783 1870 9.050601 CCTTTCTATTAATCTCAAACTGGCTAG 57.949 37.037 0.00 0.00 0.00 3.42
1784 1871 8.438676 TTTCTATTAATCTCAAACTGGCTAGC 57.561 34.615 6.04 6.04 0.00 3.42
1785 1872 7.124573 TCTATTAATCTCAAACTGGCTAGCA 57.875 36.000 18.24 1.68 0.00 3.49
1786 1873 6.986817 TCTATTAATCTCAAACTGGCTAGCAC 59.013 38.462 18.24 6.66 0.00 4.40
1787 1874 3.710209 AATCTCAAACTGGCTAGCACT 57.290 42.857 18.24 0.00 0.00 4.40
1788 1875 2.751166 TCTCAAACTGGCTAGCACTC 57.249 50.000 18.24 0.00 0.00 3.51
1789 1876 2.251818 TCTCAAACTGGCTAGCACTCT 58.748 47.619 18.24 0.00 0.00 3.24
1790 1877 2.232452 TCTCAAACTGGCTAGCACTCTC 59.768 50.000 18.24 0.00 0.00 3.20
1791 1878 1.276421 TCAAACTGGCTAGCACTCTCC 59.724 52.381 18.24 0.00 0.00 3.71
1792 1879 1.002430 CAAACTGGCTAGCACTCTCCA 59.998 52.381 18.24 2.83 0.00 3.86
1793 1880 0.610687 AACTGGCTAGCACTCTCCAC 59.389 55.000 18.24 0.00 0.00 4.02
1794 1881 0.542938 ACTGGCTAGCACTCTCCACA 60.543 55.000 18.24 1.27 0.00 4.17
1795 1882 0.108424 CTGGCTAGCACTCTCCACAC 60.108 60.000 18.24 0.00 0.00 3.82
1796 1883 0.831711 TGGCTAGCACTCTCCACACA 60.832 55.000 18.24 0.00 0.00 3.72
1797 1884 0.321671 GGCTAGCACTCTCCACACAA 59.678 55.000 18.24 0.00 0.00 3.33
1798 1885 1.433534 GCTAGCACTCTCCACACAAC 58.566 55.000 10.63 0.00 0.00 3.32
1799 1886 1.270305 GCTAGCACTCTCCACACAACA 60.270 52.381 10.63 0.00 0.00 3.33
1800 1887 2.681706 CTAGCACTCTCCACACAACAG 58.318 52.381 0.00 0.00 0.00 3.16
1801 1888 0.107456 AGCACTCTCCACACAACAGG 59.893 55.000 0.00 0.00 0.00 4.00
1802 1889 1.510480 GCACTCTCCACACAACAGGC 61.510 60.000 0.00 0.00 0.00 4.85
1803 1890 0.107456 CACTCTCCACACAACAGGCT 59.893 55.000 0.00 0.00 0.00 4.58
1804 1891 0.107456 ACTCTCCACACAACAGGCTG 59.893 55.000 14.16 14.16 0.00 4.85
1805 1892 1.227943 TCTCCACACAACAGGCTGC 60.228 57.895 15.89 0.00 0.00 5.25
1806 1893 1.526686 CTCCACACAACAGGCTGCA 60.527 57.895 15.89 0.00 0.00 4.41
1807 1894 1.512996 CTCCACACAACAGGCTGCAG 61.513 60.000 15.89 10.11 0.00 4.41
1808 1895 1.825191 CCACACAACAGGCTGCAGT 60.825 57.895 15.89 10.65 0.00 4.40
1809 1896 0.534877 CCACACAACAGGCTGCAGTA 60.535 55.000 15.89 0.00 0.00 2.74
1810 1897 0.588252 CACACAACAGGCTGCAGTAC 59.412 55.000 15.89 9.04 0.00 2.73
1811 1898 0.880278 ACACAACAGGCTGCAGTACG 60.880 55.000 15.89 6.22 0.00 3.67
1812 1899 1.301716 ACAACAGGCTGCAGTACGG 60.302 57.895 15.89 11.90 0.00 4.02
1813 1900 2.034879 CAACAGGCTGCAGTACGGG 61.035 63.158 15.89 9.19 0.00 5.28
1814 1901 2.516888 AACAGGCTGCAGTACGGGT 61.517 57.895 15.89 5.48 0.00 5.28
1815 1902 2.434884 CAGGCTGCAGTACGGGTG 60.435 66.667 16.64 0.40 0.00 4.61
1816 1903 3.706373 AGGCTGCAGTACGGGTGG 61.706 66.667 16.64 0.00 0.00 4.61
1817 1904 4.016706 GGCTGCAGTACGGGTGGT 62.017 66.667 16.64 0.00 0.00 4.16
1818 1905 2.032071 GCTGCAGTACGGGTGGTT 59.968 61.111 16.64 0.00 0.00 3.67
1819 1906 1.599797 GCTGCAGTACGGGTGGTTT 60.600 57.895 16.64 0.00 0.00 3.27
1820 1907 1.170290 GCTGCAGTACGGGTGGTTTT 61.170 55.000 16.64 0.00 0.00 2.43
1821 1908 0.872388 CTGCAGTACGGGTGGTTTTC 59.128 55.000 5.25 0.00 0.00 2.29
1822 1909 0.180642 TGCAGTACGGGTGGTTTTCA 59.819 50.000 0.00 0.00 0.00 2.69
1823 1910 1.310904 GCAGTACGGGTGGTTTTCAA 58.689 50.000 0.00 0.00 0.00 2.69
1824 1911 1.883926 GCAGTACGGGTGGTTTTCAAT 59.116 47.619 0.00 0.00 0.00 2.57
1825 1912 2.095415 GCAGTACGGGTGGTTTTCAATC 60.095 50.000 0.00 0.00 0.00 2.67
1826 1913 2.486592 CAGTACGGGTGGTTTTCAATCC 59.513 50.000 0.00 0.00 0.00 3.01
1827 1914 1.814394 GTACGGGTGGTTTTCAATCCC 59.186 52.381 0.00 0.00 35.22 3.85
1828 1915 0.186386 ACGGGTGGTTTTCAATCCCA 59.814 50.000 0.00 0.00 38.15 4.37
1829 1916 0.887933 CGGGTGGTTTTCAATCCCAG 59.112 55.000 0.00 0.00 38.15 4.45
1830 1917 1.546773 CGGGTGGTTTTCAATCCCAGA 60.547 52.381 0.00 0.00 38.15 3.86
1831 1918 1.893137 GGGTGGTTTTCAATCCCAGAC 59.107 52.381 0.00 0.00 38.15 3.51
1832 1919 1.539827 GGTGGTTTTCAATCCCAGACG 59.460 52.381 0.00 0.00 0.00 4.18
1833 1920 1.068541 GTGGTTTTCAATCCCAGACGC 60.069 52.381 0.00 0.00 0.00 5.19
1834 1921 1.243902 GGTTTTCAATCCCAGACGCA 58.756 50.000 0.00 0.00 0.00 5.24
1835 1922 1.068541 GGTTTTCAATCCCAGACGCAC 60.069 52.381 0.00 0.00 0.00 5.34
1836 1923 1.880027 GTTTTCAATCCCAGACGCACT 59.120 47.619 0.00 0.00 0.00 4.40
1837 1924 1.808411 TTTCAATCCCAGACGCACTC 58.192 50.000 0.00 0.00 0.00 3.51
1838 1925 0.684535 TTCAATCCCAGACGCACTCA 59.315 50.000 0.00 0.00 0.00 3.41
1839 1926 0.037326 TCAATCCCAGACGCACTCAC 60.037 55.000 0.00 0.00 0.00 3.51
1840 1927 1.079819 AATCCCAGACGCACTCACG 60.080 57.895 0.00 0.00 39.50 4.35
1841 1928 3.649277 ATCCCAGACGCACTCACGC 62.649 63.158 0.00 0.00 36.19 5.34
1842 1929 4.662961 CCCAGACGCACTCACGCA 62.663 66.667 0.00 0.00 36.19 5.24
1843 1930 3.406361 CCAGACGCACTCACGCAC 61.406 66.667 0.00 0.00 36.19 5.34
1844 1931 3.406361 CAGACGCACTCACGCACC 61.406 66.667 0.00 0.00 36.19 5.01
1845 1932 4.664677 AGACGCACTCACGCACCC 62.665 66.667 0.00 0.00 36.19 4.61
1850 1937 3.314331 CACTCACGCACCCCTCCT 61.314 66.667 0.00 0.00 0.00 3.69
1851 1938 1.982395 CACTCACGCACCCCTCCTA 60.982 63.158 0.00 0.00 0.00 2.94
1852 1939 1.982938 ACTCACGCACCCCTCCTAC 60.983 63.158 0.00 0.00 0.00 3.18
1853 1940 1.682684 CTCACGCACCCCTCCTACT 60.683 63.158 0.00 0.00 0.00 2.57
1854 1941 1.668101 CTCACGCACCCCTCCTACTC 61.668 65.000 0.00 0.00 0.00 2.59
1855 1942 1.982395 CACGCACCCCTCCTACTCA 60.982 63.158 0.00 0.00 0.00 3.41
1856 1943 1.229082 ACGCACCCCTCCTACTCAA 60.229 57.895 0.00 0.00 0.00 3.02
1857 1944 1.218316 CGCACCCCTCCTACTCAAC 59.782 63.158 0.00 0.00 0.00 3.18
1858 1945 1.602771 GCACCCCTCCTACTCAACC 59.397 63.158 0.00 0.00 0.00 3.77
1859 1946 1.898154 CACCCCTCCTACTCAACCG 59.102 63.158 0.00 0.00 0.00 4.44
1860 1947 1.988406 ACCCCTCCTACTCAACCGC 60.988 63.158 0.00 0.00 0.00 5.68
1861 1948 1.987855 CCCCTCCTACTCAACCGCA 60.988 63.158 0.00 0.00 0.00 5.69
1862 1949 1.338136 CCCCTCCTACTCAACCGCAT 61.338 60.000 0.00 0.00 0.00 4.73
1863 1950 0.179073 CCCTCCTACTCAACCGCATG 60.179 60.000 0.00 0.00 0.00 4.06
1864 1951 0.811616 CCTCCTACTCAACCGCATGC 60.812 60.000 7.91 7.91 0.00 4.06
1865 1952 0.108186 CTCCTACTCAACCGCATGCA 60.108 55.000 19.57 0.00 0.00 3.96
1866 1953 0.391130 TCCTACTCAACCGCATGCAC 60.391 55.000 19.57 0.00 0.00 4.57
1867 1954 1.695893 CCTACTCAACCGCATGCACG 61.696 60.000 19.57 9.46 0.00 5.34
1868 1955 0.735978 CTACTCAACCGCATGCACGA 60.736 55.000 19.57 6.82 34.06 4.35
1869 1956 0.108377 TACTCAACCGCATGCACGAT 60.108 50.000 19.57 0.00 34.06 3.73
1870 1957 1.349627 CTCAACCGCATGCACGATC 59.650 57.895 19.57 0.00 34.06 3.69
1871 1958 1.079197 TCAACCGCATGCACGATCT 60.079 52.632 19.57 0.00 34.06 2.75
1872 1959 1.061411 CAACCGCATGCACGATCTG 59.939 57.895 19.57 0.00 34.06 2.90
1880 1967 3.945434 GCACGATCTGCATGCCCG 61.945 66.667 16.68 15.25 46.29 6.13
1881 1968 3.945434 CACGATCTGCATGCCCGC 61.945 66.667 16.68 0.87 0.00 6.13
1930 2017 3.747976 GCGGCCGCTCCAACAAAT 61.748 61.111 41.71 0.00 38.26 2.32
1931 2018 2.485122 CGGCCGCTCCAACAAATC 59.515 61.111 14.67 0.00 34.01 2.17
1932 2019 2.485122 GGCCGCTCCAACAAATCG 59.515 61.111 0.00 0.00 34.01 3.34
1933 2020 2.038269 GGCCGCTCCAACAAATCGA 61.038 57.895 0.00 0.00 34.01 3.59
1934 2021 1.376609 GGCCGCTCCAACAAATCGAT 61.377 55.000 0.00 0.00 34.01 3.59
1935 2022 0.028110 GCCGCTCCAACAAATCGATC 59.972 55.000 0.00 0.00 0.00 3.69
1936 2023 0.301687 CCGCTCCAACAAATCGATCG 59.698 55.000 9.36 9.36 0.00 3.69
1937 2024 0.315382 CGCTCCAACAAATCGATCGC 60.315 55.000 11.09 0.00 0.00 4.58
1938 2025 0.028110 GCTCCAACAAATCGATCGCC 59.972 55.000 11.09 0.00 0.00 5.54
1939 2026 1.368641 CTCCAACAAATCGATCGCCA 58.631 50.000 11.09 0.00 0.00 5.69
1940 2027 1.737236 CTCCAACAAATCGATCGCCAA 59.263 47.619 11.09 0.00 0.00 4.52
1941 2028 1.466950 TCCAACAAATCGATCGCCAAC 59.533 47.619 11.09 0.00 0.00 3.77
1942 2029 1.523501 CAACAAATCGATCGCCAACG 58.476 50.000 11.09 0.00 42.01 4.10
1951 2038 4.680237 TCGCCAACGACCCAGCTG 62.680 66.667 6.78 6.78 45.12 4.24
1954 2041 4.335647 CCAACGACCCAGCTGCCT 62.336 66.667 8.66 0.00 0.00 4.75
1955 2042 2.662596 CAACGACCCAGCTGCCTA 59.337 61.111 8.66 0.00 0.00 3.93
1956 2043 1.741770 CAACGACCCAGCTGCCTAC 60.742 63.158 8.66 0.00 0.00 3.18
1957 2044 2.955881 AACGACCCAGCTGCCTACC 61.956 63.158 8.66 0.00 0.00 3.18
1958 2045 3.390521 CGACCCAGCTGCCTACCA 61.391 66.667 8.66 0.00 0.00 3.25
1959 2046 2.735772 CGACCCAGCTGCCTACCAT 61.736 63.158 8.66 0.00 0.00 3.55
1960 2047 1.153086 GACCCAGCTGCCTACCATG 60.153 63.158 8.66 0.00 0.00 3.66
1961 2048 2.194056 CCCAGCTGCCTACCATGG 59.806 66.667 11.19 11.19 0.00 3.66
1968 2055 2.513897 GCCTACCATGGCCACGAC 60.514 66.667 8.16 0.00 46.82 4.34
1969 2056 2.202878 CCTACCATGGCCACGACG 60.203 66.667 8.16 0.00 0.00 5.12
1970 2057 2.577059 CTACCATGGCCACGACGT 59.423 61.111 8.16 4.09 0.00 4.34
1971 2058 1.518572 CTACCATGGCCACGACGTC 60.519 63.158 8.16 5.18 0.00 4.34
1972 2059 2.220615 CTACCATGGCCACGACGTCA 62.221 60.000 8.16 0.00 0.00 4.35
1973 2060 2.495366 TACCATGGCCACGACGTCAC 62.495 60.000 8.16 1.22 0.00 3.67
1974 2061 2.356913 CATGGCCACGACGTCACA 60.357 61.111 8.16 6.37 0.00 3.58
1975 2062 2.357034 ATGGCCACGACGTCACAC 60.357 61.111 8.16 1.21 0.00 3.82
1976 2063 3.158537 ATGGCCACGACGTCACACA 62.159 57.895 8.16 7.09 0.00 3.72
1977 2064 3.335534 GGCCACGACGTCACACAC 61.336 66.667 17.16 0.07 0.00 3.82
1978 2065 2.583868 GCCACGACGTCACACACA 60.584 61.111 17.16 0.00 0.00 3.72
1979 2066 2.867091 GCCACGACGTCACACACAC 61.867 63.158 17.16 0.00 0.00 3.82
1980 2067 1.517475 CCACGACGTCACACACACA 60.517 57.895 17.16 0.00 0.00 3.72
1981 2068 1.628983 CACGACGTCACACACACAC 59.371 57.895 17.16 0.00 0.00 3.82
1982 2069 1.870458 ACGACGTCACACACACACG 60.870 57.895 17.16 0.00 39.48 4.49
1983 2070 2.618839 GACGTCACACACACACGC 59.381 61.111 11.55 0.00 37.02 5.34
1984 2071 3.192475 GACGTCACACACACACGCG 62.192 63.158 11.55 3.53 37.02 6.01
1985 2072 4.627114 CGTCACACACACACGCGC 62.627 66.667 5.73 0.00 0.00 6.86
1986 2073 4.627114 GTCACACACACACGCGCG 62.627 66.667 30.96 30.96 0.00 6.86
1999 2086 4.312231 GCGCGCACACACACACAT 62.312 61.111 29.10 0.00 0.00 3.21
2000 2087 2.949030 GCGCGCACACACACACATA 61.949 57.895 29.10 0.00 0.00 2.29
2001 2088 1.154672 CGCGCACACACACACATAC 60.155 57.895 8.75 0.00 0.00 2.39
2002 2089 1.826299 CGCGCACACACACACATACA 61.826 55.000 8.75 0.00 0.00 2.29
2003 2090 0.384230 GCGCACACACACACATACAC 60.384 55.000 0.30 0.00 0.00 2.90
2004 2091 0.933796 CGCACACACACACATACACA 59.066 50.000 0.00 0.00 0.00 3.72
2005 2092 1.332816 CGCACACACACACATACACAC 60.333 52.381 0.00 0.00 0.00 3.82
2006 2093 1.332816 GCACACACACACATACACACG 60.333 52.381 0.00 0.00 0.00 4.49
2007 2094 0.934496 ACACACACACATACACACGC 59.066 50.000 0.00 0.00 0.00 5.34
2008 2095 0.234625 CACACACACATACACACGCC 59.765 55.000 0.00 0.00 0.00 5.68
2009 2096 0.179070 ACACACACATACACACGCCA 60.179 50.000 0.00 0.00 0.00 5.69
2010 2097 1.155889 CACACACATACACACGCCAT 58.844 50.000 0.00 0.00 0.00 4.40
2011 2098 1.136000 CACACACATACACACGCCATG 60.136 52.381 0.00 0.00 0.00 3.66
2012 2099 1.270571 ACACACATACACACGCCATGA 60.271 47.619 0.00 0.00 0.00 3.07
2013 2100 2.009051 CACACATACACACGCCATGAT 58.991 47.619 0.00 0.00 0.00 2.45
2014 2101 2.030823 CACACATACACACGCCATGATC 59.969 50.000 0.00 0.00 0.00 2.92
2015 2102 1.599071 CACATACACACGCCATGATCC 59.401 52.381 0.00 0.00 0.00 3.36
2016 2103 1.209261 ACATACACACGCCATGATCCA 59.791 47.619 0.00 0.00 0.00 3.41
2017 2104 1.869132 CATACACACGCCATGATCCAG 59.131 52.381 0.00 0.00 0.00 3.86
2018 2105 0.461870 TACACACGCCATGATCCAGC 60.462 55.000 0.00 0.00 0.00 4.85
2019 2106 2.124570 ACACGCCATGATCCAGCC 60.125 61.111 0.00 0.00 0.00 4.85
2020 2107 2.191375 CACGCCATGATCCAGCCT 59.809 61.111 0.00 0.00 0.00 4.58
2021 2108 1.890979 CACGCCATGATCCAGCCTC 60.891 63.158 0.00 0.00 0.00 4.70
2022 2109 2.664185 CGCCATGATCCAGCCTCG 60.664 66.667 0.00 0.00 0.00 4.63
2023 2110 2.976903 GCCATGATCCAGCCTCGC 60.977 66.667 0.00 0.00 0.00 5.03
2024 2111 2.664185 CCATGATCCAGCCTCGCG 60.664 66.667 0.00 0.00 0.00 5.87
2025 2112 2.664185 CATGATCCAGCCTCGCGG 60.664 66.667 6.13 0.00 0.00 6.46
2026 2113 2.839632 ATGATCCAGCCTCGCGGA 60.840 61.111 6.13 0.00 36.22 5.54
2027 2114 3.157217 ATGATCCAGCCTCGCGGAC 62.157 63.158 6.13 0.00 35.11 4.79
2028 2115 4.593864 GATCCAGCCTCGCGGACC 62.594 72.222 6.13 0.00 35.11 4.46
2035 2122 4.271816 CCTCGCGGACCCGATCTG 62.272 72.222 13.24 0.00 42.83 2.90
2036 2123 4.271816 CTCGCGGACCCGATCTGG 62.272 72.222 13.24 0.91 42.83 3.86
2037 2124 4.807631 TCGCGGACCCGATCTGGA 62.808 66.667 13.24 0.00 42.00 3.86
2038 2125 4.570663 CGCGGACCCGATCTGGAC 62.571 72.222 13.24 3.48 42.00 4.02
2039 2126 4.570663 GCGGACCCGATCTGGACG 62.571 72.222 13.24 14.01 42.00 4.79
2040 2127 4.570663 CGGACCCGATCTGGACGC 62.571 72.222 10.54 0.00 42.00 5.19
2041 2128 3.458163 GGACCCGATCTGGACGCA 61.458 66.667 10.54 0.00 42.00 5.24
2042 2129 2.202756 GACCCGATCTGGACGCAC 60.203 66.667 10.54 0.00 42.00 5.34
2043 2130 2.680352 ACCCGATCTGGACGCACT 60.680 61.111 10.54 0.00 42.00 4.40
2044 2131 2.202797 CCCGATCTGGACGCACTG 60.203 66.667 0.00 0.00 42.00 3.66
2045 2132 2.710902 CCCGATCTGGACGCACTGA 61.711 63.158 0.00 0.00 42.00 3.41
2046 2133 1.439228 CCGATCTGGACGCACTGAT 59.561 57.895 0.00 0.06 42.00 2.90
2047 2134 0.873312 CCGATCTGGACGCACTGATG 60.873 60.000 4.46 0.00 42.00 3.07
2056 2143 3.503363 GCACTGATGCCGGTCTGC 61.503 66.667 1.90 0.00 46.97 4.26
2057 2144 2.046988 CACTGATGCCGGTCTGCA 60.047 61.111 1.90 0.00 46.94 4.41
2058 2145 2.046892 ACTGATGCCGGTCTGCAC 60.047 61.111 1.90 0.00 45.48 4.57
2059 2146 2.821366 CTGATGCCGGTCTGCACC 60.821 66.667 1.90 0.00 45.48 5.01
2067 2154 4.408821 GGTCTGCACCGCCATGGA 62.409 66.667 18.40 0.00 42.00 3.41
2068 2155 3.127533 GTCTGCACCGCCATGGAC 61.128 66.667 18.40 5.97 42.00 4.02
2069 2156 3.321648 TCTGCACCGCCATGGACT 61.322 61.111 18.40 0.00 42.00 3.85
2070 2157 2.821366 CTGCACCGCCATGGACTC 60.821 66.667 18.40 0.00 42.00 3.36
2071 2158 4.758251 TGCACCGCCATGGACTCG 62.758 66.667 18.40 9.82 42.00 4.18
2072 2159 4.451150 GCACCGCCATGGACTCGA 62.451 66.667 18.40 0.00 42.00 4.04
2073 2160 2.509336 CACCGCCATGGACTCGAC 60.509 66.667 18.40 0.00 42.00 4.20
2074 2161 3.771160 ACCGCCATGGACTCGACC 61.771 66.667 18.40 0.00 42.00 4.79
2075 2162 3.461773 CCGCCATGGACTCGACCT 61.462 66.667 18.40 0.00 42.00 3.85
2076 2163 2.125326 CCGCCATGGACTCGACCTA 61.125 63.158 18.40 0.00 42.00 3.08
2077 2164 1.360551 CGCCATGGACTCGACCTAG 59.639 63.158 18.40 0.00 0.00 3.02
2078 2165 1.068250 GCCATGGACTCGACCTAGC 59.932 63.158 18.40 0.00 0.00 3.42
2079 2166 1.360551 CCATGGACTCGACCTAGCG 59.639 63.158 5.56 0.00 0.00 4.26
2080 2167 1.299468 CATGGACTCGACCTAGCGC 60.299 63.158 0.00 0.00 0.00 5.92
2081 2168 1.753078 ATGGACTCGACCTAGCGCA 60.753 57.895 11.47 0.00 0.00 6.09
2082 2169 1.320344 ATGGACTCGACCTAGCGCAA 61.320 55.000 11.47 0.00 0.00 4.85
2083 2170 1.516603 GGACTCGACCTAGCGCAAC 60.517 63.158 11.47 0.00 0.00 4.17
2084 2171 1.868251 GACTCGACCTAGCGCAACG 60.868 63.158 11.47 7.77 0.00 4.10
2085 2172 2.249557 GACTCGACCTAGCGCAACGA 62.250 60.000 11.47 11.79 0.00 3.85
2086 2173 1.868251 CTCGACCTAGCGCAACGAC 60.868 63.158 11.47 0.00 0.00 4.34
2087 2174 3.238241 CGACCTAGCGCAACGACG 61.238 66.667 11.47 6.02 0.00 5.12
2108 2195 4.338539 GTCGTCACCGTGCTCCGT 62.339 66.667 0.00 0.00 35.01 4.69
2109 2196 4.034258 TCGTCACCGTGCTCCGTC 62.034 66.667 0.00 0.00 35.01 4.79
2110 2197 4.337060 CGTCACCGTGCTCCGTCA 62.337 66.667 0.00 0.00 33.66 4.35
2111 2198 2.261671 GTCACCGTGCTCCGTCAT 59.738 61.111 0.00 0.00 33.66 3.06
2112 2199 2.094659 GTCACCGTGCTCCGTCATG 61.095 63.158 0.00 0.00 33.66 3.07
2113 2200 2.815211 CACCGTGCTCCGTCATGG 60.815 66.667 0.00 6.34 46.15 3.66
2114 2201 4.760047 ACCGTGCTCCGTCATGGC 62.760 66.667 7.47 0.00 44.94 4.40
2115 2202 4.457496 CCGTGCTCCGTCATGGCT 62.457 66.667 0.00 0.00 36.44 4.75
2116 2203 2.434884 CGTGCTCCGTCATGGCTT 60.435 61.111 0.00 0.00 37.80 4.35
2117 2204 1.153647 CGTGCTCCGTCATGGCTTA 60.154 57.895 0.00 0.00 37.80 3.09
2118 2205 0.530650 CGTGCTCCGTCATGGCTTAT 60.531 55.000 0.00 0.00 37.80 1.73
2119 2206 1.668419 GTGCTCCGTCATGGCTTATT 58.332 50.000 0.00 0.00 37.80 1.40
2120 2207 1.599542 GTGCTCCGTCATGGCTTATTC 59.400 52.381 0.00 0.00 37.80 1.75
2121 2208 0.861837 GCTCCGTCATGGCTTATTCG 59.138 55.000 0.00 0.00 37.80 3.34
2122 2209 0.861837 CTCCGTCATGGCTTATTCGC 59.138 55.000 0.00 0.00 37.80 4.70
2123 2210 0.176910 TCCGTCATGGCTTATTCGCA 59.823 50.000 0.00 0.00 37.80 5.10
2124 2211 1.013596 CCGTCATGGCTTATTCGCAA 58.986 50.000 0.00 0.00 0.00 4.85
2125 2212 1.268032 CCGTCATGGCTTATTCGCAAC 60.268 52.381 0.00 0.00 0.00 4.17
2126 2213 1.396648 CGTCATGGCTTATTCGCAACA 59.603 47.619 0.00 0.00 0.00 3.33
2127 2214 2.159585 CGTCATGGCTTATTCGCAACAA 60.160 45.455 0.00 0.00 0.00 2.83
2128 2215 3.487376 CGTCATGGCTTATTCGCAACAAT 60.487 43.478 0.00 0.00 0.00 2.71
2129 2216 4.260579 CGTCATGGCTTATTCGCAACAATA 60.261 41.667 0.00 0.00 0.00 1.90
2130 2217 5.560760 CGTCATGGCTTATTCGCAACAATAT 60.561 40.000 0.00 0.00 0.00 1.28
2131 2218 6.208644 GTCATGGCTTATTCGCAACAATATT 58.791 36.000 0.00 0.00 0.00 1.28
2132 2219 6.142798 GTCATGGCTTATTCGCAACAATATTG 59.857 38.462 14.01 14.01 0.00 1.90
2133 2220 5.574891 TGGCTTATTCGCAACAATATTGT 57.425 34.783 15.47 15.47 44.72 2.71
2134 2221 5.577835 TGGCTTATTCGCAACAATATTGTC 58.422 37.500 21.02 9.13 41.31 3.18
2135 2222 4.976116 GGCTTATTCGCAACAATATTGTCC 59.024 41.667 21.02 13.82 41.31 4.02
2136 2223 5.449862 GGCTTATTCGCAACAATATTGTCCA 60.450 40.000 21.02 4.84 41.31 4.02
2137 2224 6.033341 GCTTATTCGCAACAATATTGTCCAA 58.967 36.000 21.02 11.54 41.31 3.53
2138 2225 6.697019 GCTTATTCGCAACAATATTGTCCAAT 59.303 34.615 21.02 16.66 41.31 3.16
2139 2226 7.222611 GCTTATTCGCAACAATATTGTCCAATT 59.777 33.333 21.02 2.72 41.31 2.32
2140 2227 9.729023 CTTATTCGCAACAATATTGTCCAATTA 57.271 29.630 21.02 9.75 41.31 1.40
2142 2229 7.804614 TTCGCAACAATATTGTCCAATTAAC 57.195 32.000 21.02 4.75 41.31 2.01
2143 2230 7.151999 TCGCAACAATATTGTCCAATTAACT 57.848 32.000 21.02 0.00 41.31 2.24
2144 2231 7.247728 TCGCAACAATATTGTCCAATTAACTC 58.752 34.615 21.02 1.82 41.31 3.01
2160 2247 7.362401 CCAATTAACTCCATCTGAACCTTCAAG 60.362 40.741 0.00 0.00 36.64 3.02
2161 2248 4.982241 AACTCCATCTGAACCTTCAAGA 57.018 40.909 0.00 0.00 36.64 3.02
2196 2283 9.342308 ACTATTCCATATATTTCCAGTTGTGTG 57.658 33.333 0.00 0.00 0.00 3.82
2205 2292 0.740149 CCAGTTGTGTGTGCATGTGT 59.260 50.000 0.00 0.00 0.00 3.72
2206 2293 1.534385 CCAGTTGTGTGTGCATGTGTG 60.534 52.381 0.00 0.00 0.00 3.82
2207 2294 1.132834 CAGTTGTGTGTGCATGTGTGT 59.867 47.619 0.00 0.00 0.00 3.72
2208 2295 1.132834 AGTTGTGTGTGCATGTGTGTG 59.867 47.619 0.00 0.00 0.00 3.82
2209 2296 1.132073 GTTGTGTGTGCATGTGTGTGA 59.868 47.619 0.00 0.00 0.00 3.58
2210 2297 1.457346 TGTGTGTGCATGTGTGTGAA 58.543 45.000 0.00 0.00 0.00 3.18
2211 2298 1.815003 TGTGTGTGCATGTGTGTGAAA 59.185 42.857 0.00 0.00 0.00 2.69
2212 2299 2.184448 GTGTGTGCATGTGTGTGAAAC 58.816 47.619 0.00 0.00 37.35 2.78
2239 2328 3.589988 ACTTGGTGCTGACTATTCTTCG 58.410 45.455 0.00 0.00 0.00 3.79
2241 2330 2.959516 TGGTGCTGACTATTCTTCGTG 58.040 47.619 0.00 0.00 0.00 4.35
2385 2474 2.026542 TGCAGATCACTTCTTCCAGCAT 60.027 45.455 0.00 0.00 29.93 3.79
2420 2509 4.506039 TGCAGCTGAGCAAACCAT 57.494 50.000 20.43 0.00 42.46 3.55
2421 2510 2.736197 TGCAGCTGAGCAAACCATT 58.264 47.368 20.43 0.00 42.46 3.16
2451 2540 0.250513 ACTACAACCCTAGCAGCAGC 59.749 55.000 0.00 0.00 42.56 5.25
2616 2705 1.607467 GGTGGCCATGCAGGAGTTT 60.607 57.895 9.72 0.00 41.22 2.66
2618 2707 0.895100 GTGGCCATGCAGGAGTTTCA 60.895 55.000 9.72 0.00 41.22 2.69
2626 2715 1.066858 TGCAGGAGTTTCAGACCGATC 60.067 52.381 0.00 0.00 0.00 3.69
2633 2722 1.743958 GTTTCAGACCGATCGAGAGGA 59.256 52.381 18.66 6.05 0.00 3.71
2634 2723 2.350057 TTCAGACCGATCGAGAGGAT 57.650 50.000 18.66 1.67 38.35 3.24
2641 2730 1.239347 CGATCGAGAGGATGGTGCTA 58.761 55.000 10.26 0.00 34.82 3.49
2645 2734 0.249238 CGAGAGGATGGTGCTACAGC 60.249 60.000 0.00 0.00 42.50 4.40
2649 2738 1.208052 GAGGATGGTGCTACAGCTTCA 59.792 52.381 12.71 1.60 42.66 3.02
2662 2751 0.610232 AGCTTCAATGACCAGTGGCC 60.610 55.000 9.78 0.00 0.00 5.36
2699 2788 2.110213 GATATTGGCCGGCCGTGA 59.890 61.111 39.00 27.59 39.42 4.35
2802 2891 0.534652 GGCTCATGGACATCTCTGCC 60.535 60.000 0.00 0.00 0.00 4.85
2855 2944 1.439679 GCCCTGTCTGTTTCTTACCG 58.560 55.000 0.00 0.00 0.00 4.02
3015 4471 5.296748 TGTATATGCATGCGTATTGACAGT 58.703 37.500 31.72 13.63 31.38 3.55
3037 4493 9.117183 ACAGTATTATATGCATGCATATTCCAG 57.883 33.333 42.62 31.05 44.49 3.86
3040 4496 9.334947 GTATTATATGCATGCATATTCCAGACT 57.665 33.333 42.62 26.83 44.49 3.24
3043 4499 4.420522 TGCATGCATATTCCAGACTACA 57.579 40.909 18.46 0.00 0.00 2.74
3184 4640 7.147532 ACACTTACTCCCTCCATTCCTAAATAC 60.148 40.741 0.00 0.00 0.00 1.89
3185 4641 7.071321 CACTTACTCCCTCCATTCCTAAATACT 59.929 40.741 0.00 0.00 0.00 2.12
3187 4643 5.289510 ACTCCCTCCATTCCTAAATACTGT 58.710 41.667 0.00 0.00 0.00 3.55
3188 4644 6.449956 ACTCCCTCCATTCCTAAATACTGTA 58.550 40.000 0.00 0.00 0.00 2.74
3189 4645 7.082972 ACTCCCTCCATTCCTAAATACTGTAT 58.917 38.462 0.00 0.00 0.00 2.29
3190 4646 8.239478 ACTCCCTCCATTCCTAAATACTGTATA 58.761 37.037 0.00 0.00 0.00 1.47
3191 4647 8.431910 TCCCTCCATTCCTAAATACTGTATAC 57.568 38.462 0.00 0.00 0.00 1.47
3192 4648 7.456902 TCCCTCCATTCCTAAATACTGTATACC 59.543 40.741 0.00 0.00 0.00 2.73
3292 4748 2.156917 TCCGTATATAGTCCGCACTGG 58.843 52.381 0.00 0.00 40.09 4.00
3343 4799 3.055385 CGGAGGGAGTAATTGTCAGGAAA 60.055 47.826 0.00 0.00 0.00 3.13
3372 4828 7.148355 AGGAAGAACTTTACAACAAAAACGA 57.852 32.000 0.00 0.00 0.00 3.85
3407 4863 5.113502 GCATGATGCTAGAATAAACCACC 57.886 43.478 10.72 0.00 40.96 4.61
3422 4878 4.431416 AACCACCAACACTCATGAGTAA 57.569 40.909 27.44 0.00 40.20 2.24
3448 4904 1.204704 TCATCAAGGCTCAGTGGTACG 59.795 52.381 0.00 0.00 0.00 3.67
3466 4922 5.650266 TGGTACGCTTTCCATCATTGTTTAT 59.350 36.000 0.00 0.00 0.00 1.40
3494 4950 2.273370 TTGCCTTACGATGACGAGAC 57.727 50.000 0.00 0.00 42.66 3.36
3549 5005 1.176527 ATTGTTGTGGATCAAGCCGG 58.823 50.000 0.00 0.00 36.66 6.13
3596 5052 4.625607 TTTTCCACAAAAACACACCCTT 57.374 36.364 0.00 0.00 31.88 3.95
3598 5054 1.746220 TCCACAAAAACACACCCTTCG 59.254 47.619 0.00 0.00 0.00 3.79
3613 5069 2.683362 CCCTTCGGAGAAAGCCAAATAC 59.317 50.000 0.00 0.00 45.90 1.89
3618 5074 6.318900 CCTTCGGAGAAAGCCAAATACTATTT 59.681 38.462 0.00 0.00 45.90 1.40
3623 5079 7.908601 CGGAGAAAGCCAAATACTATTTGTTAC 59.091 37.037 16.83 8.65 0.00 2.50
3676 5132 5.741011 ACTCAATAACCGAAATCCAAGCTA 58.259 37.500 0.00 0.00 0.00 3.32
3699 5155 7.381678 GCTAAAACTCGGTTAGATCGTTCATAT 59.618 37.037 0.00 0.00 31.37 1.78
3722 5178 4.202253 TGCCAGCTGAGTCGTCAATATATT 60.202 41.667 17.39 0.00 30.14 1.28
3760 5216 3.179830 AGCTCACAAGATACGCGTAAAG 58.820 45.455 24.55 14.97 0.00 1.85
3777 5233 8.180267 ACGCGTAAAGTAATATCTTAGCGATAT 58.820 33.333 11.67 0.00 45.14 1.63
3786 5242 9.712305 GTAATATCTTAGCGATATGGCCATAAT 57.288 33.333 28.75 16.80 43.00 1.28
3798 5258 8.458052 CGATATGGCCATAATACATGCTTAAAA 58.542 33.333 28.75 2.64 0.00 1.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 1.923204 CTCTCATCCGTGAAGCTTTCG 59.077 52.381 14.95 14.95 33.05 3.46
52 55 0.374758 TCGTCCGTACATGTAGCGTC 59.625 55.000 19.38 13.61 0.00 5.19
54 57 0.097499 TGTCGTCCGTACATGTAGCG 59.903 55.000 5.62 12.47 0.00 4.26
61 64 1.135717 CCGTACAATGTCGTCCGTACA 60.136 52.381 0.00 0.00 35.10 2.90
73 76 3.388676 TCCATCCGTTAATCCCGTACAAT 59.611 43.478 0.00 0.00 0.00 2.71
88 91 0.839946 ATCCCAAGGAAGTCCATCCG 59.160 55.000 0.00 0.00 44.60 4.18
95 98 1.760405 ACCAGGAATCCCAAGGAAGT 58.240 50.000 9.59 0.00 34.34 3.01
99 102 0.618458 TCGAACCAGGAATCCCAAGG 59.382 55.000 0.00 0.00 36.36 3.61
101 104 1.912731 TCATCGAACCAGGAATCCCAA 59.087 47.619 0.00 0.00 33.88 4.12
133 136 1.679559 AATCCCCCGTACGTGTAGCC 61.680 60.000 15.21 0.00 0.00 3.93
155 174 2.370189 CACCCTCTAATCCCCTCATCAC 59.630 54.545 0.00 0.00 0.00 3.06
156 175 2.022035 ACACCCTCTAATCCCCTCATCA 60.022 50.000 0.00 0.00 0.00 3.07
157 176 2.695585 ACACCCTCTAATCCCCTCATC 58.304 52.381 0.00 0.00 0.00 2.92
158 177 2.897823 ACACCCTCTAATCCCCTCAT 57.102 50.000 0.00 0.00 0.00 2.90
159 178 2.661176 AACACCCTCTAATCCCCTCA 57.339 50.000 0.00 0.00 0.00 3.86
160 179 4.040584 GTCATAACACCCTCTAATCCCCTC 59.959 50.000 0.00 0.00 0.00 4.30
161 180 3.974642 GTCATAACACCCTCTAATCCCCT 59.025 47.826 0.00 0.00 0.00 4.79
162 181 3.714798 TGTCATAACACCCTCTAATCCCC 59.285 47.826 0.00 0.00 0.00 4.81
163 182 4.409247 ACTGTCATAACACCCTCTAATCCC 59.591 45.833 0.00 0.00 0.00 3.85
164 183 5.615925 ACTGTCATAACACCCTCTAATCC 57.384 43.478 0.00 0.00 0.00 3.01
165 184 7.923414 AAAACTGTCATAACACCCTCTAATC 57.077 36.000 0.00 0.00 0.00 1.75
166 185 9.802039 TTAAAAACTGTCATAACACCCTCTAAT 57.198 29.630 0.00 0.00 0.00 1.73
167 186 9.802039 ATTAAAAACTGTCATAACACCCTCTAA 57.198 29.630 0.00 0.00 0.00 2.10
168 187 9.226606 CATTAAAAACTGTCATAACACCCTCTA 57.773 33.333 0.00 0.00 0.00 2.43
169 188 7.176690 CCATTAAAAACTGTCATAACACCCTCT 59.823 37.037 0.00 0.00 0.00 3.69
170 189 7.312899 CCATTAAAAACTGTCATAACACCCTC 58.687 38.462 0.00 0.00 0.00 4.30
180 199 9.226606 CTACTAATGACCCATTAAAAACTGTCA 57.773 33.333 0.00 0.00 36.14 3.58
194 213 0.750850 TGCGCCTCTACTAATGACCC 59.249 55.000 4.18 0.00 0.00 4.46
224 243 0.407918 TCCCCCACCTGAATTCAACC 59.592 55.000 9.88 0.00 0.00 3.77
225 244 2.102578 CATCCCCCACCTGAATTCAAC 58.897 52.381 9.88 0.00 0.00 3.18
246 269 4.397417 CAGCCATCTTCCAAACTTCCTAAG 59.603 45.833 0.00 0.00 0.00 2.18
263 286 3.563223 ACACGGATACTACTACAGCCAT 58.437 45.455 0.00 0.00 0.00 4.40
264 287 3.008835 ACACGGATACTACTACAGCCA 57.991 47.619 0.00 0.00 0.00 4.75
269 292 5.975939 CAGGCTTTTACACGGATACTACTAC 59.024 44.000 0.00 0.00 0.00 2.73
270 293 5.653769 ACAGGCTTTTACACGGATACTACTA 59.346 40.000 0.00 0.00 0.00 1.82
271 294 4.465305 ACAGGCTTTTACACGGATACTACT 59.535 41.667 0.00 0.00 0.00 2.57
276 299 3.193267 ACGTACAGGCTTTTACACGGATA 59.807 43.478 0.00 0.00 33.90 2.59
281 304 3.611549 GCTAGACGTACAGGCTTTTACAC 59.388 47.826 0.00 0.00 40.13 2.90
328 351 3.506844 ACGGAACCTTCTTCACTAGTCTC 59.493 47.826 0.00 0.00 0.00 3.36
476 499 2.480419 GAGTAATTGCGCTGTGTGTTCT 59.520 45.455 9.73 0.00 0.00 3.01
483 506 1.003118 TGAAGGGAGTAATTGCGCTGT 59.997 47.619 9.73 0.00 0.00 4.40
486 509 2.288666 TCATGAAGGGAGTAATTGCGC 58.711 47.619 0.00 0.00 0.00 6.09
515 538 0.555769 TCTGGGGTTCCTTTTGTGCT 59.444 50.000 0.00 0.00 0.00 4.40
525 548 2.900546 TCTGTCTCTTTCTCTGGGGTTC 59.099 50.000 0.00 0.00 0.00 3.62
552 575 2.092914 GGGGACTTCTGATCGACCAATT 60.093 50.000 0.00 0.00 0.00 2.32
559 582 0.250234 TGCTTGGGGACTTCTGATCG 59.750 55.000 0.00 0.00 0.00 3.69
713 737 1.674057 CTTCCTCGTCCCTGTGCTT 59.326 57.895 0.00 0.00 0.00 3.91
724 748 4.161189 ACATATCATATGGAGCCTTCCTCG 59.839 45.833 9.54 0.00 44.36 4.63
779 803 2.273449 CCAACCCCTGCTGGCTAG 59.727 66.667 3.63 0.00 0.00 3.42
780 804 3.338250 CCCAACCCCTGCTGGCTA 61.338 66.667 3.63 0.00 0.00 3.93
783 807 4.366684 GACCCCAACCCCTGCTGG 62.367 72.222 1.89 1.89 0.00 4.85
784 808 3.260100 AGACCCCAACCCCTGCTG 61.260 66.667 0.00 0.00 0.00 4.41
785 809 2.936032 GAGACCCCAACCCCTGCT 60.936 66.667 0.00 0.00 0.00 4.24
797 824 9.892130 CCAGTATATATCCTTTTATTGGAGACC 57.108 37.037 0.00 0.00 36.99 3.85
814 842 3.927322 TCTCCCCTGCTACCCAGTATATA 59.073 47.826 0.00 0.00 40.06 0.86
816 844 2.149556 TCTCCCCTGCTACCCAGTATA 58.850 52.381 0.00 0.00 40.06 1.47
817 845 0.941963 TCTCCCCTGCTACCCAGTAT 59.058 55.000 0.00 0.00 40.06 2.12
818 846 0.032416 GTCTCCCCTGCTACCCAGTA 60.032 60.000 0.00 0.00 40.06 2.74
819 847 1.306226 GTCTCCCCTGCTACCCAGT 60.306 63.158 0.00 0.00 40.06 4.00
820 848 2.427245 CGTCTCCCCTGCTACCCAG 61.427 68.421 0.00 0.00 41.41 4.45
821 849 2.363795 CGTCTCCCCTGCTACCCA 60.364 66.667 0.00 0.00 0.00 4.51
822 850 2.043248 TCGTCTCCCCTGCTACCC 60.043 66.667 0.00 0.00 0.00 3.69
823 851 0.683504 TTCTCGTCTCCCCTGCTACC 60.684 60.000 0.00 0.00 0.00 3.18
824 852 0.741915 CTTCTCGTCTCCCCTGCTAC 59.258 60.000 0.00 0.00 0.00 3.58
825 853 1.038130 GCTTCTCGTCTCCCCTGCTA 61.038 60.000 0.00 0.00 0.00 3.49
826 854 2.355193 GCTTCTCGTCTCCCCTGCT 61.355 63.158 0.00 0.00 0.00 4.24
827 855 1.893919 AAGCTTCTCGTCTCCCCTGC 61.894 60.000 0.00 0.00 0.00 4.85
828 856 1.407258 CTAAGCTTCTCGTCTCCCCTG 59.593 57.143 0.00 0.00 0.00 4.45
829 857 1.006162 ACTAAGCTTCTCGTCTCCCCT 59.994 52.381 0.00 0.00 0.00 4.79
837 865 4.170256 GACCTCTGAAACTAAGCTTCTCG 58.830 47.826 0.00 0.00 0.00 4.04
966 1001 4.572389 CCGCCAAATAATATAGCTAGGCAG 59.428 45.833 14.54 8.42 40.81 4.85
983 1018 3.657448 ATGTCGTCGATGCCGCCAA 62.657 57.895 0.00 0.00 35.37 4.52
992 1027 3.458163 GCCTCCCCATGTCGTCGA 61.458 66.667 0.00 0.00 0.00 4.20
1059 1094 0.760945 GGATGATGTCCTCCTCGGGT 60.761 60.000 0.00 0.00 44.16 5.28
1184 1219 8.868522 ATCAAAAGACAAGAATCATCTACCAA 57.131 30.769 0.00 0.00 33.77 3.67
1439 1478 6.041979 TCTCAATAAGTATAGCTGGCACATCA 59.958 38.462 0.00 0.00 38.20 3.07
1441 1480 6.268617 TCTCTCAATAAGTATAGCTGGCACAT 59.731 38.462 0.00 0.00 38.20 3.21
1446 1485 8.121305 AGATGTCTCTCAATAAGTATAGCTGG 57.879 38.462 0.00 0.00 0.00 4.85
1461 1500 3.706802 TGAAGCATCGAGATGTCTCTC 57.293 47.619 13.79 11.12 43.86 3.20
1462 1501 4.669206 ATTGAAGCATCGAGATGTCTCT 57.331 40.909 13.79 1.24 40.75 3.10
1463 1502 5.292834 TCAAATTGAAGCATCGAGATGTCTC 59.707 40.000 13.79 10.84 40.80 3.36
1464 1503 5.181009 TCAAATTGAAGCATCGAGATGTCT 58.819 37.500 13.79 8.95 40.80 3.41
1465 1504 5.475273 TCAAATTGAAGCATCGAGATGTC 57.525 39.130 13.79 5.98 40.80 3.06
1466 1505 4.201891 GCTCAAATTGAAGCATCGAGATGT 60.202 41.667 13.79 0.00 40.80 3.06
1467 1506 4.280461 GCTCAAATTGAAGCATCGAGATG 58.720 43.478 8.62 8.62 41.60 2.90
1468 1507 3.314635 GGCTCAAATTGAAGCATCGAGAT 59.685 43.478 15.44 0.00 0.00 2.75
1469 1508 2.679837 GGCTCAAATTGAAGCATCGAGA 59.320 45.455 15.44 0.00 0.00 4.04
1470 1509 2.421073 TGGCTCAAATTGAAGCATCGAG 59.579 45.455 15.44 0.00 0.00 4.04
1471 1510 2.435422 TGGCTCAAATTGAAGCATCGA 58.565 42.857 15.44 0.00 0.00 3.59
1472 1511 2.925578 TGGCTCAAATTGAAGCATCG 57.074 45.000 15.44 0.00 0.00 3.84
1473 1512 7.599630 TTTTATTGGCTCAAATTGAAGCATC 57.400 32.000 15.44 0.00 0.00 3.91
1474 1513 8.570068 AATTTTATTGGCTCAAATTGAAGCAT 57.430 26.923 15.44 7.27 30.59 3.79
1475 1514 7.660617 TGAATTTTATTGGCTCAAATTGAAGCA 59.339 29.630 15.44 1.73 31.66 3.91
1476 1515 8.031848 TGAATTTTATTGGCTCAAATTGAAGC 57.968 30.769 0.00 3.27 31.66 3.86
1477 1516 8.173130 GCTGAATTTTATTGGCTCAAATTGAAG 58.827 33.333 0.00 0.00 31.66 3.02
1478 1517 7.879160 AGCTGAATTTTATTGGCTCAAATTGAA 59.121 29.630 0.00 0.00 31.66 2.69
1479 1518 7.388437 AGCTGAATTTTATTGGCTCAAATTGA 58.612 30.769 0.00 0.00 31.66 2.57
1480 1519 7.605410 AGCTGAATTTTATTGGCTCAAATTG 57.395 32.000 0.00 0.00 31.66 2.32
1481 1520 8.625786 AAAGCTGAATTTTATTGGCTCAAATT 57.374 26.923 0.00 0.00 33.70 1.82
1482 1521 8.508875 CAAAAGCTGAATTTTATTGGCTCAAAT 58.491 29.630 0.00 0.00 31.29 2.32
1483 1522 7.498570 ACAAAAGCTGAATTTTATTGGCTCAAA 59.501 29.630 0.00 0.00 31.29 2.69
1484 1523 6.991531 ACAAAAGCTGAATTTTATTGGCTCAA 59.008 30.769 0.00 0.00 31.29 3.02
1485 1524 6.523840 ACAAAAGCTGAATTTTATTGGCTCA 58.476 32.000 0.00 0.00 31.29 4.26
1486 1525 6.183360 CGACAAAAGCTGAATTTTATTGGCTC 60.183 38.462 0.00 0.00 31.29 4.70
1487 1526 5.634859 CGACAAAAGCTGAATTTTATTGGCT 59.365 36.000 0.00 0.00 31.29 4.75
1488 1527 5.163963 CCGACAAAAGCTGAATTTTATTGGC 60.164 40.000 0.00 0.00 26.51 4.52
1489 1528 6.155827 TCCGACAAAAGCTGAATTTTATTGG 58.844 36.000 0.00 0.00 33.21 3.16
1490 1529 7.636259 TTCCGACAAAAGCTGAATTTTATTG 57.364 32.000 0.00 0.00 31.29 1.90
1491 1530 8.655651 TTTTCCGACAAAAGCTGAATTTTATT 57.344 26.923 0.00 0.00 31.29 1.40
1492 1531 8.655651 TTTTTCCGACAAAAGCTGAATTTTAT 57.344 26.923 0.00 0.00 31.29 1.40
1494 1533 6.976636 TTTTTCCGACAAAAGCTGAATTTT 57.023 29.167 0.00 0.00 32.65 1.82
1515 1554 7.768120 CAGGATTGTCTCTCAGTATAGCTTTTT 59.232 37.037 0.00 0.00 0.00 1.94
1516 1555 7.124901 TCAGGATTGTCTCTCAGTATAGCTTTT 59.875 37.037 0.00 0.00 0.00 2.27
1517 1556 6.609212 TCAGGATTGTCTCTCAGTATAGCTTT 59.391 38.462 0.00 0.00 0.00 3.51
1518 1557 6.132658 TCAGGATTGTCTCTCAGTATAGCTT 58.867 40.000 0.00 0.00 0.00 3.74
1519 1558 5.700183 TCAGGATTGTCTCTCAGTATAGCT 58.300 41.667 0.00 0.00 0.00 3.32
1520 1559 5.048083 CCTCAGGATTGTCTCTCAGTATAGC 60.048 48.000 0.00 0.00 0.00 2.97
1521 1560 5.476599 CCCTCAGGATTGTCTCTCAGTATAG 59.523 48.000 0.00 0.00 33.47 1.31
1522 1561 5.389520 CCCTCAGGATTGTCTCTCAGTATA 58.610 45.833 0.00 0.00 33.47 1.47
1523 1562 4.222336 CCCTCAGGATTGTCTCTCAGTAT 58.778 47.826 0.00 0.00 33.47 2.12
1524 1563 3.636679 CCCTCAGGATTGTCTCTCAGTA 58.363 50.000 0.00 0.00 33.47 2.74
1525 1564 2.465813 CCCTCAGGATTGTCTCTCAGT 58.534 52.381 0.00 0.00 33.47 3.41
1538 1577 1.740025 GAACGAATTCAAGCCCTCAGG 59.260 52.381 6.22 0.00 34.70 3.86
1539 1578 2.160417 GTGAACGAATTCAAGCCCTCAG 59.840 50.000 6.22 0.00 46.40 3.35
1541 1580 2.427506 AGTGAACGAATTCAAGCCCTC 58.572 47.619 6.22 0.00 46.40 4.30
1543 1582 3.243401 ACAAAGTGAACGAATTCAAGCCC 60.243 43.478 6.22 0.00 46.40 5.19
1544 1583 3.964909 ACAAAGTGAACGAATTCAAGCC 58.035 40.909 6.22 0.00 46.40 4.35
1545 1584 4.441087 GGAACAAAGTGAACGAATTCAAGC 59.559 41.667 6.22 0.00 46.40 4.01
1546 1585 5.577835 TGGAACAAAGTGAACGAATTCAAG 58.422 37.500 6.22 0.00 40.73 3.02
1547 1586 5.568685 TGGAACAAAGTGAACGAATTCAA 57.431 34.783 6.22 0.00 40.73 2.69
1587 1672 7.306574 GGAAATTTAGAACAAAACTGCCTTTCG 60.307 37.037 0.00 0.00 0.00 3.46
1593 1678 6.280643 AGGTGGAAATTTAGAACAAAACTGC 58.719 36.000 0.00 0.00 0.00 4.40
1627 1714 5.078949 ACCATCAAATCTGATTCAACACCA 58.921 37.500 2.92 0.00 40.49 4.17
1630 1717 7.868922 CAGAAAACCATCAAATCTGATTCAACA 59.131 33.333 2.92 0.00 40.49 3.33
1631 1718 7.148689 GCAGAAAACCATCAAATCTGATTCAAC 60.149 37.037 2.92 0.00 40.49 3.18
1634 1721 5.514204 CGCAGAAAACCATCAAATCTGATTC 59.486 40.000 2.92 0.00 40.49 2.52
1636 1723 4.701651 TCGCAGAAAACCATCAAATCTGAT 59.298 37.500 5.34 0.00 43.40 2.90
1637 1724 4.071423 TCGCAGAAAACCATCAAATCTGA 58.929 39.130 5.34 0.00 39.85 3.27
1638 1725 4.424061 TCGCAGAAAACCATCAAATCTG 57.576 40.909 0.00 0.00 40.30 2.90
1640 1727 3.920412 GGTTCGCAGAAAACCATCAAATC 59.080 43.478 0.26 0.00 45.90 2.17
1641 1728 3.913089 GGTTCGCAGAAAACCATCAAAT 58.087 40.909 0.26 0.00 45.90 2.32
1649 1736 0.442699 CGGCTAGGTTCGCAGAAAAC 59.557 55.000 0.00 0.00 45.90 2.43
1651 1738 4.590487 CGGCTAGGTTCGCAGAAA 57.410 55.556 0.00 0.00 45.90 2.52
1657 1744 3.650139 ACTATATTTGCGGCTAGGTTCG 58.350 45.455 0.00 0.00 0.00 3.95
1658 1745 7.668525 AATTACTATATTTGCGGCTAGGTTC 57.331 36.000 0.00 0.00 0.00 3.62
1659 1746 8.459911 AAAATTACTATATTTGCGGCTAGGTT 57.540 30.769 0.00 0.00 0.00 3.50
1662 1749 9.730420 AACAAAAATTACTATATTTGCGGCTAG 57.270 29.630 0.00 0.00 36.48 3.42
1663 1750 9.509855 CAACAAAAATTACTATATTTGCGGCTA 57.490 29.630 0.00 0.00 36.48 3.93
1664 1751 7.491048 CCAACAAAAATTACTATATTTGCGGCT 59.509 33.333 0.00 0.00 36.48 5.52
1665 1752 7.254286 CCCAACAAAAATTACTATATTTGCGGC 60.254 37.037 0.00 0.00 36.48 6.53
1666 1753 7.254286 GCCCAACAAAAATTACTATATTTGCGG 60.254 37.037 0.00 0.00 36.48 5.69
1668 1755 8.485976 TGCCCAACAAAAATTACTATATTTGC 57.514 30.769 0.00 0.00 36.48 3.68
1669 1756 8.603181 GCTGCCCAACAAAAATTACTATATTTG 58.397 33.333 0.00 0.00 38.42 2.32
1670 1757 8.539544 AGCTGCCCAACAAAAATTACTATATTT 58.460 29.630 0.00 0.00 0.00 1.40
1671 1758 8.078060 AGCTGCCCAACAAAAATTACTATATT 57.922 30.769 0.00 0.00 0.00 1.28
1672 1759 7.561356 AGAGCTGCCCAACAAAAATTACTATAT 59.439 33.333 0.00 0.00 0.00 0.86
1673 1760 6.889722 AGAGCTGCCCAACAAAAATTACTATA 59.110 34.615 0.00 0.00 0.00 1.31
1674 1761 5.716703 AGAGCTGCCCAACAAAAATTACTAT 59.283 36.000 0.00 0.00 0.00 2.12
1675 1762 5.076873 AGAGCTGCCCAACAAAAATTACTA 58.923 37.500 0.00 0.00 0.00 1.82
1677 1764 4.237724 GAGAGCTGCCCAACAAAAATTAC 58.762 43.478 0.00 0.00 0.00 1.89
1678 1765 3.258123 GGAGAGCTGCCCAACAAAAATTA 59.742 43.478 0.00 0.00 0.00 1.40
1680 1767 1.620323 GGAGAGCTGCCCAACAAAAAT 59.380 47.619 0.00 0.00 0.00 1.82
1683 1770 1.228552 GGGAGAGCTGCCCAACAAA 60.229 57.895 14.93 0.00 45.31 2.83
1689 1776 2.042025 AGAGAGGGAGAGCTGCCC 60.042 66.667 12.45 12.45 46.40 5.36
1690 1777 1.076044 AGAGAGAGGGAGAGCTGCC 60.076 63.158 0.00 0.00 41.91 4.85
1691 1778 1.109323 GGAGAGAGAGGGAGAGCTGC 61.109 65.000 0.00 0.00 0.00 5.25
1692 1779 0.819259 CGGAGAGAGAGGGAGAGCTG 60.819 65.000 0.00 0.00 0.00 4.24
1693 1780 1.531748 CGGAGAGAGAGGGAGAGCT 59.468 63.158 0.00 0.00 0.00 4.09
1694 1781 1.528309 CCGGAGAGAGAGGGAGAGC 60.528 68.421 0.00 0.00 0.00 4.09
1695 1782 0.179029 GTCCGGAGAGAGAGGGAGAG 60.179 65.000 3.06 0.00 0.00 3.20
1696 1783 1.916738 GTCCGGAGAGAGAGGGAGA 59.083 63.158 3.06 0.00 0.00 3.71
1697 1784 1.525077 CGTCCGGAGAGAGAGGGAG 60.525 68.421 3.06 0.00 0.00 4.30
1699 1786 1.077644 TTCGTCCGGAGAGAGAGGG 60.078 63.158 3.06 0.00 0.00 4.30
1700 1787 0.107606 TCTTCGTCCGGAGAGAGAGG 60.108 60.000 3.06 3.04 0.00 3.69
1702 1789 2.699321 TCTATCTTCGTCCGGAGAGAGA 59.301 50.000 16.22 16.22 0.00 3.10
1703 1790 3.114668 TCTATCTTCGTCCGGAGAGAG 57.885 52.381 3.06 12.34 0.00 3.20
1704 1791 3.134262 TCTTCTATCTTCGTCCGGAGAGA 59.866 47.826 3.06 9.65 0.00 3.10
1705 1792 3.468770 TCTTCTATCTTCGTCCGGAGAG 58.531 50.000 3.06 1.52 0.00 3.20
1706 1793 3.555527 TCTTCTATCTTCGTCCGGAGA 57.444 47.619 3.06 1.18 0.00 3.71
1708 1795 2.358267 GCTTCTTCTATCTTCGTCCGGA 59.642 50.000 0.00 0.00 0.00 5.14
1709 1796 2.099263 TGCTTCTTCTATCTTCGTCCGG 59.901 50.000 0.00 0.00 0.00 5.14
1710 1797 3.109619 GTGCTTCTTCTATCTTCGTCCG 58.890 50.000 0.00 0.00 0.00 4.79
1711 1798 4.109050 CTGTGCTTCTTCTATCTTCGTCC 58.891 47.826 0.00 0.00 0.00 4.79
1712 1799 4.739195 ACTGTGCTTCTTCTATCTTCGTC 58.261 43.478 0.00 0.00 0.00 4.20
1714 1801 6.473397 AAAACTGTGCTTCTTCTATCTTCG 57.527 37.500 0.00 0.00 0.00 3.79
1716 1803 6.207614 GGGAAAAACTGTGCTTCTTCTATCTT 59.792 38.462 3.14 0.00 0.00 2.40
1718 1805 5.390991 CGGGAAAAACTGTGCTTCTTCTATC 60.391 44.000 3.14 0.00 0.00 2.08
1720 1807 3.813166 CGGGAAAAACTGTGCTTCTTCTA 59.187 43.478 3.14 0.00 0.00 2.10
1721 1808 2.618709 CGGGAAAAACTGTGCTTCTTCT 59.381 45.455 3.14 0.00 0.00 2.85
1722 1809 2.287608 CCGGGAAAAACTGTGCTTCTTC 60.288 50.000 0.00 0.00 0.00 2.87
1724 1811 1.318576 CCGGGAAAAACTGTGCTTCT 58.681 50.000 0.00 0.00 0.00 2.85
1725 1812 0.318699 GCCGGGAAAAACTGTGCTTC 60.319 55.000 2.18 0.00 0.00 3.86
1727 1814 2.200337 GGCCGGGAAAAACTGTGCT 61.200 57.895 2.18 0.00 0.00 4.40
1728 1815 2.338620 GGCCGGGAAAAACTGTGC 59.661 61.111 2.18 0.00 0.00 4.57
1729 1816 2.642700 CGGCCGGGAAAAACTGTG 59.357 61.111 20.10 0.00 0.00 3.66
1730 1817 3.292159 GCGGCCGGGAAAAACTGT 61.292 61.111 29.38 0.00 0.00 3.55
1731 1818 3.291383 TGCGGCCGGGAAAAACTG 61.291 61.111 29.38 0.00 0.00 3.16
1732 1819 3.292159 GTGCGGCCGGGAAAAACT 61.292 61.111 29.38 0.00 0.00 2.66
1734 1821 3.821636 TACGTGCGGCCGGGAAAAA 62.822 57.895 29.38 0.00 0.00 1.94
1735 1822 4.311445 TACGTGCGGCCGGGAAAA 62.311 61.111 29.38 0.00 0.00 2.29
1742 1829 4.692475 AGGGTTGTACGTGCGGCC 62.692 66.667 0.00 2.70 0.00 6.13
1743 1830 2.178892 GAAAGGGTTGTACGTGCGGC 62.179 60.000 0.00 0.00 0.00 6.53
1744 1831 0.601841 AGAAAGGGTTGTACGTGCGG 60.602 55.000 0.00 0.00 0.00 5.69
1745 1832 2.068837 TAGAAAGGGTTGTACGTGCG 57.931 50.000 0.00 0.00 0.00 5.34
1746 1833 6.537660 AGATTAATAGAAAGGGTTGTACGTGC 59.462 38.462 0.00 0.00 0.00 5.34
1747 1834 7.762615 TGAGATTAATAGAAAGGGTTGTACGTG 59.237 37.037 0.00 0.00 0.00 4.49
1748 1835 7.844009 TGAGATTAATAGAAAGGGTTGTACGT 58.156 34.615 0.00 0.00 0.00 3.57
1749 1836 8.712285 TTGAGATTAATAGAAAGGGTTGTACG 57.288 34.615 0.00 0.00 0.00 3.67
1752 1839 9.014297 CAGTTTGAGATTAATAGAAAGGGTTGT 57.986 33.333 0.00 0.00 0.00 3.32
1753 1840 8.462016 CCAGTTTGAGATTAATAGAAAGGGTTG 58.538 37.037 0.00 0.00 0.00 3.77
1754 1841 7.122799 GCCAGTTTGAGATTAATAGAAAGGGTT 59.877 37.037 0.00 0.00 0.00 4.11
1755 1842 6.603599 GCCAGTTTGAGATTAATAGAAAGGGT 59.396 38.462 0.00 0.00 0.00 4.34
1756 1843 6.830838 AGCCAGTTTGAGATTAATAGAAAGGG 59.169 38.462 0.00 0.00 0.00 3.95
1757 1844 7.872113 AGCCAGTTTGAGATTAATAGAAAGG 57.128 36.000 0.00 0.00 0.00 3.11
1758 1845 8.555361 GCTAGCCAGTTTGAGATTAATAGAAAG 58.445 37.037 2.29 0.00 0.00 2.62
1759 1846 8.046708 TGCTAGCCAGTTTGAGATTAATAGAAA 58.953 33.333 13.29 0.00 0.00 2.52
1760 1847 7.495934 GTGCTAGCCAGTTTGAGATTAATAGAA 59.504 37.037 13.29 0.00 0.00 2.10
1761 1848 6.986817 GTGCTAGCCAGTTTGAGATTAATAGA 59.013 38.462 13.29 0.00 0.00 1.98
1762 1849 6.989169 AGTGCTAGCCAGTTTGAGATTAATAG 59.011 38.462 13.29 0.00 0.00 1.73
1763 1850 6.889198 AGTGCTAGCCAGTTTGAGATTAATA 58.111 36.000 13.29 0.00 0.00 0.98
1764 1851 5.749462 AGTGCTAGCCAGTTTGAGATTAAT 58.251 37.500 13.29 0.00 0.00 1.40
1765 1852 5.046304 AGAGTGCTAGCCAGTTTGAGATTAA 60.046 40.000 13.29 0.00 0.00 1.40
1766 1853 4.467795 AGAGTGCTAGCCAGTTTGAGATTA 59.532 41.667 13.29 0.00 0.00 1.75
1767 1854 3.262915 AGAGTGCTAGCCAGTTTGAGATT 59.737 43.478 13.29 0.00 0.00 2.40
1768 1855 2.836981 AGAGTGCTAGCCAGTTTGAGAT 59.163 45.455 13.29 0.00 0.00 2.75
1769 1856 2.232452 GAGAGTGCTAGCCAGTTTGAGA 59.768 50.000 13.29 0.00 0.00 3.27
1770 1857 2.615869 GAGAGTGCTAGCCAGTTTGAG 58.384 52.381 13.29 0.00 0.00 3.02
1771 1858 1.276421 GGAGAGTGCTAGCCAGTTTGA 59.724 52.381 13.29 0.00 0.00 2.69
1772 1859 1.002430 TGGAGAGTGCTAGCCAGTTTG 59.998 52.381 13.29 0.00 0.00 2.93
1773 1860 1.002544 GTGGAGAGTGCTAGCCAGTTT 59.997 52.381 13.29 0.00 0.00 2.66
1774 1861 0.610687 GTGGAGAGTGCTAGCCAGTT 59.389 55.000 13.29 0.00 0.00 3.16
1775 1862 0.542938 TGTGGAGAGTGCTAGCCAGT 60.543 55.000 13.29 3.13 0.00 4.00
1776 1863 0.108424 GTGTGGAGAGTGCTAGCCAG 60.108 60.000 13.29 0.00 0.00 4.85
1777 1864 0.831711 TGTGTGGAGAGTGCTAGCCA 60.832 55.000 13.29 0.00 0.00 4.75
1778 1865 0.321671 TTGTGTGGAGAGTGCTAGCC 59.678 55.000 13.29 3.49 0.00 3.93
1779 1866 1.270305 TGTTGTGTGGAGAGTGCTAGC 60.270 52.381 8.10 8.10 0.00 3.42
1780 1867 2.611473 CCTGTTGTGTGGAGAGTGCTAG 60.611 54.545 0.00 0.00 0.00 3.42
1781 1868 1.344438 CCTGTTGTGTGGAGAGTGCTA 59.656 52.381 0.00 0.00 0.00 3.49
1782 1869 0.107456 CCTGTTGTGTGGAGAGTGCT 59.893 55.000 0.00 0.00 0.00 4.40
1783 1870 1.510480 GCCTGTTGTGTGGAGAGTGC 61.510 60.000 0.00 0.00 0.00 4.40
1784 1871 0.107456 AGCCTGTTGTGTGGAGAGTG 59.893 55.000 0.00 0.00 0.00 3.51
1785 1872 0.107456 CAGCCTGTTGTGTGGAGAGT 59.893 55.000 0.00 0.00 0.00 3.24
1786 1873 1.233285 GCAGCCTGTTGTGTGGAGAG 61.233 60.000 0.00 0.00 0.00 3.20
1787 1874 1.227943 GCAGCCTGTTGTGTGGAGA 60.228 57.895 0.00 0.00 0.00 3.71
1788 1875 1.512996 CTGCAGCCTGTTGTGTGGAG 61.513 60.000 0.00 0.00 0.00 3.86
1789 1876 1.526686 CTGCAGCCTGTTGTGTGGA 60.527 57.895 0.00 0.00 0.00 4.02
1790 1877 0.534877 TACTGCAGCCTGTTGTGTGG 60.535 55.000 15.27 0.00 0.00 4.17
1791 1878 0.588252 GTACTGCAGCCTGTTGTGTG 59.412 55.000 15.27 0.00 0.00 3.82
1792 1879 0.880278 CGTACTGCAGCCTGTTGTGT 60.880 55.000 15.27 0.00 0.00 3.72
1793 1880 1.568612 CCGTACTGCAGCCTGTTGTG 61.569 60.000 15.27 0.00 0.00 3.33
1794 1881 1.301716 CCGTACTGCAGCCTGTTGT 60.302 57.895 15.27 0.00 0.00 3.32
1795 1882 2.034879 CCCGTACTGCAGCCTGTTG 61.035 63.158 15.27 0.00 0.00 3.33
1796 1883 2.347490 CCCGTACTGCAGCCTGTT 59.653 61.111 15.27 0.00 0.00 3.16
1797 1884 2.923035 ACCCGTACTGCAGCCTGT 60.923 61.111 15.27 1.09 0.00 4.00
1798 1885 2.434884 CACCCGTACTGCAGCCTG 60.435 66.667 15.27 2.87 0.00 4.85
1799 1886 3.706373 CCACCCGTACTGCAGCCT 61.706 66.667 15.27 0.00 0.00 4.58
1800 1887 3.546714 AACCACCCGTACTGCAGCC 62.547 63.158 15.27 3.46 0.00 4.85
1801 1888 1.170290 AAAACCACCCGTACTGCAGC 61.170 55.000 15.27 0.00 0.00 5.25
1802 1889 0.872388 GAAAACCACCCGTACTGCAG 59.128 55.000 13.48 13.48 0.00 4.41
1803 1890 0.180642 TGAAAACCACCCGTACTGCA 59.819 50.000 0.00 0.00 0.00 4.41
1804 1891 1.310904 TTGAAAACCACCCGTACTGC 58.689 50.000 0.00 0.00 0.00 4.40
1805 1892 2.486592 GGATTGAAAACCACCCGTACTG 59.513 50.000 0.00 0.00 0.00 2.74
1806 1893 2.553685 GGGATTGAAAACCACCCGTACT 60.554 50.000 0.00 0.00 29.94 2.73
1807 1894 1.814394 GGGATTGAAAACCACCCGTAC 59.186 52.381 0.00 0.00 29.94 3.67
1808 1895 1.424302 TGGGATTGAAAACCACCCGTA 59.576 47.619 0.00 0.00 39.04 4.02
1809 1896 0.186386 TGGGATTGAAAACCACCCGT 59.814 50.000 0.00 0.00 39.04 5.28
1810 1897 0.887933 CTGGGATTGAAAACCACCCG 59.112 55.000 0.00 0.00 39.04 5.28
1811 1898 1.893137 GTCTGGGATTGAAAACCACCC 59.107 52.381 0.00 0.00 37.48 4.61
1812 1899 1.539827 CGTCTGGGATTGAAAACCACC 59.460 52.381 0.00 0.00 0.00 4.61
1813 1900 1.068541 GCGTCTGGGATTGAAAACCAC 60.069 52.381 0.00 0.00 0.00 4.16
1814 1901 1.243902 GCGTCTGGGATTGAAAACCA 58.756 50.000 0.00 0.00 0.00 3.67
1815 1902 1.068541 GTGCGTCTGGGATTGAAAACC 60.069 52.381 0.00 0.00 0.00 3.27
1816 1903 1.880027 AGTGCGTCTGGGATTGAAAAC 59.120 47.619 0.00 0.00 0.00 2.43
1817 1904 2.151202 GAGTGCGTCTGGGATTGAAAA 58.849 47.619 0.00 0.00 0.00 2.29
1818 1905 1.071542 TGAGTGCGTCTGGGATTGAAA 59.928 47.619 0.00 0.00 0.00 2.69
1819 1906 0.684535 TGAGTGCGTCTGGGATTGAA 59.315 50.000 0.00 0.00 0.00 2.69
1820 1907 0.037326 GTGAGTGCGTCTGGGATTGA 60.037 55.000 0.00 0.00 0.00 2.57
1821 1908 1.354337 CGTGAGTGCGTCTGGGATTG 61.354 60.000 0.00 0.00 0.00 2.67
1822 1909 1.079819 CGTGAGTGCGTCTGGGATT 60.080 57.895 0.00 0.00 0.00 3.01
1823 1910 2.573869 CGTGAGTGCGTCTGGGAT 59.426 61.111 0.00 0.00 0.00 3.85
1824 1911 4.357947 GCGTGAGTGCGTCTGGGA 62.358 66.667 0.00 0.00 0.00 4.37
1825 1912 4.662961 TGCGTGAGTGCGTCTGGG 62.663 66.667 0.00 0.00 37.81 4.45
1826 1913 3.406361 GTGCGTGAGTGCGTCTGG 61.406 66.667 0.00 0.00 37.81 3.86
1827 1914 3.406361 GGTGCGTGAGTGCGTCTG 61.406 66.667 0.00 0.00 37.81 3.51
1828 1915 4.664677 GGGTGCGTGAGTGCGTCT 62.665 66.667 0.00 0.00 37.81 4.18
1833 1920 1.982395 TAGGAGGGGTGCGTGAGTG 60.982 63.158 0.00 0.00 0.00 3.51
1834 1921 1.982938 GTAGGAGGGGTGCGTGAGT 60.983 63.158 0.00 0.00 0.00 3.41
1835 1922 1.668101 GAGTAGGAGGGGTGCGTGAG 61.668 65.000 0.00 0.00 0.00 3.51
1836 1923 1.681327 GAGTAGGAGGGGTGCGTGA 60.681 63.158 0.00 0.00 0.00 4.35
1837 1924 1.541310 TTGAGTAGGAGGGGTGCGTG 61.541 60.000 0.00 0.00 0.00 5.34
1838 1925 1.229082 TTGAGTAGGAGGGGTGCGT 60.229 57.895 0.00 0.00 0.00 5.24
1839 1926 1.218316 GTTGAGTAGGAGGGGTGCG 59.782 63.158 0.00 0.00 0.00 5.34
1840 1927 1.602771 GGTTGAGTAGGAGGGGTGC 59.397 63.158 0.00 0.00 0.00 5.01
1841 1928 1.898154 CGGTTGAGTAGGAGGGGTG 59.102 63.158 0.00 0.00 0.00 4.61
1842 1929 1.988406 GCGGTTGAGTAGGAGGGGT 60.988 63.158 0.00 0.00 0.00 4.95
1843 1930 1.338136 ATGCGGTTGAGTAGGAGGGG 61.338 60.000 0.00 0.00 0.00 4.79
1844 1931 0.179073 CATGCGGTTGAGTAGGAGGG 60.179 60.000 0.00 0.00 0.00 4.30
1845 1932 0.811616 GCATGCGGTTGAGTAGGAGG 60.812 60.000 0.00 0.00 0.00 4.30
1846 1933 0.108186 TGCATGCGGTTGAGTAGGAG 60.108 55.000 14.09 0.00 0.00 3.69
1847 1934 0.391130 GTGCATGCGGTTGAGTAGGA 60.391 55.000 14.09 0.00 0.00 2.94
1848 1935 1.695893 CGTGCATGCGGTTGAGTAGG 61.696 60.000 14.09 0.00 0.00 3.18
1849 1936 0.735978 TCGTGCATGCGGTTGAGTAG 60.736 55.000 14.09 0.00 0.00 2.57
1850 1937 0.108377 ATCGTGCATGCGGTTGAGTA 60.108 50.000 14.09 0.00 0.00 2.59
1851 1938 1.361668 GATCGTGCATGCGGTTGAGT 61.362 55.000 14.09 0.00 0.00 3.41
1852 1939 1.086067 AGATCGTGCATGCGGTTGAG 61.086 55.000 14.09 0.46 0.00 3.02
1853 1940 1.079197 AGATCGTGCATGCGGTTGA 60.079 52.632 14.09 8.28 0.00 3.18
1854 1941 1.061411 CAGATCGTGCATGCGGTTG 59.939 57.895 14.09 2.46 0.00 3.77
1855 1942 3.489731 CAGATCGTGCATGCGGTT 58.510 55.556 14.09 2.40 0.00 4.44
1864 1951 3.945434 GCGGGCATGCAGATCGTG 61.945 66.667 21.36 1.44 34.15 4.35
1913 2000 3.683587 GATTTGTTGGAGCGGCCGC 62.684 63.158 42.34 42.34 40.66 6.53
1914 2001 2.485122 GATTTGTTGGAGCGGCCG 59.515 61.111 24.05 24.05 40.66 6.13
1915 2002 1.376609 ATCGATTTGTTGGAGCGGCC 61.377 55.000 0.00 0.00 37.10 6.13
1916 2003 0.028110 GATCGATTTGTTGGAGCGGC 59.972 55.000 0.00 0.00 0.00 6.53
1917 2004 0.301687 CGATCGATTTGTTGGAGCGG 59.698 55.000 10.26 0.00 38.16 5.52
1918 2005 0.315382 GCGATCGATTTGTTGGAGCG 60.315 55.000 21.57 0.00 43.65 5.03
1919 2006 0.028110 GGCGATCGATTTGTTGGAGC 59.972 55.000 21.57 0.00 0.00 4.70
1920 2007 1.368641 TGGCGATCGATTTGTTGGAG 58.631 50.000 21.57 0.00 0.00 3.86
1921 2008 1.466950 GTTGGCGATCGATTTGTTGGA 59.533 47.619 21.57 0.00 0.00 3.53
1922 2009 1.790123 CGTTGGCGATCGATTTGTTGG 60.790 52.381 21.57 0.00 41.33 3.77
1923 2010 1.127766 TCGTTGGCGATCGATTTGTTG 59.872 47.619 21.57 1.51 42.81 3.33
1924 2011 1.434555 TCGTTGGCGATCGATTTGTT 58.565 45.000 21.57 0.00 42.81 2.83
1925 2012 3.131326 TCGTTGGCGATCGATTTGT 57.869 47.368 21.57 0.00 42.81 2.83
1934 2021 4.680237 CAGCTGGGTCGTTGGCGA 62.680 66.667 5.57 0.00 45.79 5.54
1937 2024 2.954684 TAGGCAGCTGGGTCGTTGG 61.955 63.158 17.12 0.00 0.00 3.77
1938 2025 1.741770 GTAGGCAGCTGGGTCGTTG 60.742 63.158 17.12 0.00 0.00 4.10
1939 2026 2.663196 GTAGGCAGCTGGGTCGTT 59.337 61.111 17.12 0.00 0.00 3.85
1940 2027 3.391382 GGTAGGCAGCTGGGTCGT 61.391 66.667 17.12 2.98 0.00 4.34
1941 2028 2.735772 ATGGTAGGCAGCTGGGTCG 61.736 63.158 17.12 0.00 0.00 4.79
1942 2029 1.153086 CATGGTAGGCAGCTGGGTC 60.153 63.158 17.12 0.00 0.00 4.46
1943 2030 2.683465 CCATGGTAGGCAGCTGGGT 61.683 63.158 17.12 0.00 0.00 4.51
1944 2031 2.194056 CCATGGTAGGCAGCTGGG 59.806 66.667 17.12 0.93 0.00 4.45
1952 2039 2.202878 CGTCGTGGCCATGGTAGG 60.203 66.667 24.78 8.45 0.00 3.18
1953 2040 1.518572 GACGTCGTGGCCATGGTAG 60.519 63.158 24.78 17.34 0.00 3.18
1954 2041 2.276853 TGACGTCGTGGCCATGGTA 61.277 57.895 24.78 3.39 0.00 3.25
1955 2042 3.621805 TGACGTCGTGGCCATGGT 61.622 61.111 24.78 15.46 0.00 3.55
1956 2043 3.118454 GTGACGTCGTGGCCATGG 61.118 66.667 24.78 7.63 0.00 3.66
1957 2044 2.356913 TGTGACGTCGTGGCCATG 60.357 61.111 19.62 19.62 0.00 3.66
1958 2045 2.357034 GTGTGACGTCGTGGCCAT 60.357 61.111 9.72 0.00 0.00 4.40
1959 2046 3.839432 TGTGTGACGTCGTGGCCA 61.839 61.111 11.62 0.00 0.00 5.36
1960 2047 3.335534 GTGTGTGACGTCGTGGCC 61.336 66.667 11.62 0.00 0.00 5.36
1961 2048 2.583868 TGTGTGTGACGTCGTGGC 60.584 61.111 11.62 1.78 0.00 5.01
1962 2049 1.517475 TGTGTGTGTGACGTCGTGG 60.517 57.895 11.62 0.00 0.00 4.94
1963 2050 1.628983 GTGTGTGTGTGACGTCGTG 59.371 57.895 11.62 0.00 0.00 4.35
1964 2051 1.870458 CGTGTGTGTGTGACGTCGT 60.870 57.895 11.62 0.00 0.00 4.34
1965 2052 2.910549 CGTGTGTGTGTGACGTCG 59.089 61.111 11.62 0.00 0.00 5.12
1966 2053 2.618839 GCGTGTGTGTGTGACGTC 59.381 61.111 9.11 9.11 35.52 4.34
1967 2054 3.251763 CGCGTGTGTGTGTGACGT 61.252 61.111 0.00 0.00 35.52 4.34
1968 2055 4.627114 GCGCGTGTGTGTGTGACG 62.627 66.667 8.43 0.00 36.18 4.35
1969 2056 4.627114 CGCGCGTGTGTGTGTGAC 62.627 66.667 24.19 0.00 31.69 3.67
1982 2069 2.949030 TATGTGTGTGTGTGCGCGC 61.949 57.895 27.26 27.26 36.27 6.86
1983 2070 1.154672 GTATGTGTGTGTGTGCGCG 60.155 57.895 0.00 0.00 0.00 6.86
1984 2071 0.384230 GTGTATGTGTGTGTGTGCGC 60.384 55.000 0.00 0.00 0.00 6.09
1985 2072 0.933796 TGTGTATGTGTGTGTGTGCG 59.066 50.000 0.00 0.00 0.00 5.34
1986 2073 1.332816 CGTGTGTATGTGTGTGTGTGC 60.333 52.381 0.00 0.00 0.00 4.57
1987 2074 1.332816 GCGTGTGTATGTGTGTGTGTG 60.333 52.381 0.00 0.00 0.00 3.82
1988 2075 0.934496 GCGTGTGTATGTGTGTGTGT 59.066 50.000 0.00 0.00 0.00 3.72
1989 2076 0.234625 GGCGTGTGTATGTGTGTGTG 59.765 55.000 0.00 0.00 0.00 3.82
1990 2077 0.179070 TGGCGTGTGTATGTGTGTGT 60.179 50.000 0.00 0.00 0.00 3.72
1991 2078 1.136000 CATGGCGTGTGTATGTGTGTG 60.136 52.381 0.00 0.00 0.00 3.82
1992 2079 1.155889 CATGGCGTGTGTATGTGTGT 58.844 50.000 0.00 0.00 0.00 3.72
1993 2080 1.437625 TCATGGCGTGTGTATGTGTG 58.562 50.000 6.60 0.00 0.00 3.82
1994 2081 2.279741 GATCATGGCGTGTGTATGTGT 58.720 47.619 6.60 0.00 0.00 3.72
1995 2082 1.599071 GGATCATGGCGTGTGTATGTG 59.401 52.381 6.60 0.00 0.00 3.21
1996 2083 1.209261 TGGATCATGGCGTGTGTATGT 59.791 47.619 6.60 0.00 0.00 2.29
1997 2084 1.869132 CTGGATCATGGCGTGTGTATG 59.131 52.381 6.60 0.00 0.00 2.39
1998 2085 1.811558 GCTGGATCATGGCGTGTGTAT 60.812 52.381 6.60 0.00 0.00 2.29
1999 2086 0.461870 GCTGGATCATGGCGTGTGTA 60.462 55.000 6.60 0.00 0.00 2.90
2000 2087 1.746615 GCTGGATCATGGCGTGTGT 60.747 57.895 6.60 0.00 0.00 3.72
2001 2088 2.475466 GGCTGGATCATGGCGTGTG 61.475 63.158 6.60 0.00 0.00 3.82
2002 2089 2.124570 GGCTGGATCATGGCGTGT 60.125 61.111 6.60 0.00 0.00 4.49
2003 2090 1.890979 GAGGCTGGATCATGGCGTG 60.891 63.158 0.00 0.00 0.00 5.34
2004 2091 2.507944 GAGGCTGGATCATGGCGT 59.492 61.111 0.00 0.00 0.00 5.68
2005 2092 2.664185 CGAGGCTGGATCATGGCG 60.664 66.667 0.00 0.00 0.00 5.69
2006 2093 2.976903 GCGAGGCTGGATCATGGC 60.977 66.667 0.00 0.00 0.00 4.40
2007 2094 2.664185 CGCGAGGCTGGATCATGG 60.664 66.667 0.00 0.00 0.00 3.66
2019 2106 4.271816 CCAGATCGGGTCCGCGAG 62.272 72.222 8.23 0.00 39.59 5.03
2020 2107 4.807631 TCCAGATCGGGTCCGCGA 62.808 66.667 8.23 8.91 39.59 5.87
2021 2108 4.570663 GTCCAGATCGGGTCCGCG 62.571 72.222 11.92 0.00 39.59 6.46
2022 2109 4.570663 CGTCCAGATCGGGTCCGC 62.571 72.222 11.92 0.97 39.59 5.54
2023 2110 4.570663 GCGTCCAGATCGGGTCCG 62.571 72.222 11.92 15.15 41.35 4.79
2024 2111 3.458163 TGCGTCCAGATCGGGTCC 61.458 66.667 11.92 3.34 34.36 4.46
2025 2112 2.202756 GTGCGTCCAGATCGGGTC 60.203 66.667 11.92 5.42 34.36 4.46
2026 2113 2.680352 AGTGCGTCCAGATCGGGT 60.680 61.111 11.92 0.00 34.36 5.28
2027 2114 2.021068 ATCAGTGCGTCCAGATCGGG 62.021 60.000 5.39 5.39 34.36 5.14
2028 2115 0.873312 CATCAGTGCGTCCAGATCGG 60.873 60.000 0.00 0.00 0.00 4.18
2029 2116 1.485838 GCATCAGTGCGTCCAGATCG 61.486 60.000 0.00 0.00 42.28 3.69
2030 2117 2.305405 GCATCAGTGCGTCCAGATC 58.695 57.895 0.00 0.00 42.28 2.75
2031 2118 4.528674 GCATCAGTGCGTCCAGAT 57.471 55.556 0.00 0.00 42.28 2.90
2040 2127 2.046988 TGCAGACCGGCATCAGTG 60.047 61.111 0.00 0.00 39.25 3.66
2041 2128 2.046892 GTGCAGACCGGCATCAGT 60.047 61.111 0.00 0.00 46.92 3.41
2042 2129 2.821366 GGTGCAGACCGGCATCAG 60.821 66.667 0.00 0.00 46.92 2.90
2050 2137 4.408821 TCCATGGCGGTGCAGACC 62.409 66.667 6.96 0.00 39.14 3.85
2051 2138 3.127533 GTCCATGGCGGTGCAGAC 61.128 66.667 6.96 0.00 35.57 3.51
2052 2139 3.315142 GAGTCCATGGCGGTGCAGA 62.315 63.158 6.96 0.00 35.57 4.26
2053 2140 2.821366 GAGTCCATGGCGGTGCAG 60.821 66.667 6.96 0.00 35.57 4.41
2054 2141 4.758251 CGAGTCCATGGCGGTGCA 62.758 66.667 6.96 0.00 35.57 4.57
2055 2142 4.451150 TCGAGTCCATGGCGGTGC 62.451 66.667 6.96 0.00 35.57 5.01
2056 2143 2.509336 GTCGAGTCCATGGCGGTG 60.509 66.667 6.96 0.00 35.57 4.94
2057 2144 2.849096 TAGGTCGAGTCCATGGCGGT 62.849 60.000 6.96 0.00 35.57 5.68
2058 2145 2.076622 CTAGGTCGAGTCCATGGCGG 62.077 65.000 6.96 0.75 0.00 6.13
2059 2146 1.360551 CTAGGTCGAGTCCATGGCG 59.639 63.158 6.96 5.26 0.00 5.69
2060 2147 1.068250 GCTAGGTCGAGTCCATGGC 59.932 63.158 6.96 2.00 0.00 4.40
2061 2148 1.360551 CGCTAGGTCGAGTCCATGG 59.639 63.158 4.97 4.97 0.00 3.66
2062 2149 1.299468 GCGCTAGGTCGAGTCCATG 60.299 63.158 0.00 0.00 0.00 3.66
2063 2150 1.320344 TTGCGCTAGGTCGAGTCCAT 61.320 55.000 9.73 0.00 0.00 3.41
2064 2151 1.974875 TTGCGCTAGGTCGAGTCCA 60.975 57.895 9.73 0.00 0.00 4.02
2065 2152 1.516603 GTTGCGCTAGGTCGAGTCC 60.517 63.158 9.73 0.00 0.00 3.85
2066 2153 1.868251 CGTTGCGCTAGGTCGAGTC 60.868 63.158 9.73 0.00 0.00 3.36
2067 2154 2.178521 CGTTGCGCTAGGTCGAGT 59.821 61.111 9.73 0.00 0.00 4.18
2068 2155 1.868251 GTCGTTGCGCTAGGTCGAG 60.868 63.158 9.73 0.00 0.00 4.04
2069 2156 2.177531 GTCGTTGCGCTAGGTCGA 59.822 61.111 9.73 3.68 0.00 4.20
2070 2157 3.238241 CGTCGTTGCGCTAGGTCG 61.238 66.667 9.73 12.84 0.00 4.79
2100 2187 1.599542 GAATAAGCCATGACGGAGCAC 59.400 52.381 0.00 0.00 36.56 4.40
2101 2188 1.806247 CGAATAAGCCATGACGGAGCA 60.806 52.381 0.00 0.00 36.56 4.26
2102 2189 0.861837 CGAATAAGCCATGACGGAGC 59.138 55.000 0.00 0.00 36.56 4.70
2103 2190 0.861837 GCGAATAAGCCATGACGGAG 59.138 55.000 0.00 0.00 36.56 4.63
2104 2191 0.176910 TGCGAATAAGCCATGACGGA 59.823 50.000 0.00 0.00 36.56 4.69
2105 2192 1.013596 TTGCGAATAAGCCATGACGG 58.986 50.000 0.00 0.00 36.02 4.79
2106 2193 1.396648 TGTTGCGAATAAGCCATGACG 59.603 47.619 0.00 0.00 36.02 4.35
2107 2194 3.485947 TTGTTGCGAATAAGCCATGAC 57.514 42.857 0.00 0.00 36.02 3.06
2108 2195 6.183360 ACAATATTGTTGCGAATAAGCCATGA 60.183 34.615 15.47 0.00 38.47 3.07
2109 2196 5.978919 ACAATATTGTTGCGAATAAGCCATG 59.021 36.000 15.47 0.00 38.47 3.66
2110 2197 6.147864 ACAATATTGTTGCGAATAAGCCAT 57.852 33.333 15.47 0.00 38.47 4.40
2111 2198 5.449862 GGACAATATTGTTGCGAATAAGCCA 60.450 40.000 21.63 0.00 42.43 4.75
2112 2199 4.976116 GGACAATATTGTTGCGAATAAGCC 59.024 41.667 21.63 10.55 42.43 4.35
2113 2200 5.577835 TGGACAATATTGTTGCGAATAAGC 58.422 37.500 21.63 5.44 42.43 3.09
2114 2201 8.633075 AATTGGACAATATTGTTGCGAATAAG 57.367 30.769 21.63 0.00 42.43 1.73
2116 2203 9.509855 GTTAATTGGACAATATTGTTGCGAATA 57.490 29.630 21.63 9.05 42.43 1.75
2117 2204 8.250332 AGTTAATTGGACAATATTGTTGCGAAT 58.750 29.630 21.63 14.88 42.43 3.34
2118 2205 7.598278 AGTTAATTGGACAATATTGTTGCGAA 58.402 30.769 21.63 13.41 42.43 4.70
2119 2206 7.151999 AGTTAATTGGACAATATTGTTGCGA 57.848 32.000 21.63 11.17 42.43 5.10
2120 2207 6.472163 GGAGTTAATTGGACAATATTGTTGCG 59.528 38.462 21.63 0.00 42.43 4.85
2121 2208 7.319646 TGGAGTTAATTGGACAATATTGTTGC 58.680 34.615 21.63 10.25 42.43 4.17
2122 2209 9.520204 GATGGAGTTAATTGGACAATATTGTTG 57.480 33.333 21.63 0.00 42.43 3.33
2123 2210 9.479549 AGATGGAGTTAATTGGACAATATTGTT 57.520 29.630 21.63 8.57 42.43 2.83
2124 2211 8.906867 CAGATGGAGTTAATTGGACAATATTGT 58.093 33.333 20.93 20.93 45.65 2.71
2125 2212 9.123902 TCAGATGGAGTTAATTGGACAATATTG 57.876 33.333 14.01 14.01 0.00 1.90
2126 2213 9.699410 TTCAGATGGAGTTAATTGGACAATATT 57.301 29.630 0.00 0.00 0.00 1.28
2127 2214 9.125026 GTTCAGATGGAGTTAATTGGACAATAT 57.875 33.333 0.00 0.00 0.00 1.28
2128 2215 7.556275 GGTTCAGATGGAGTTAATTGGACAATA 59.444 37.037 0.00 0.00 0.00 1.90
2129 2216 6.378280 GGTTCAGATGGAGTTAATTGGACAAT 59.622 38.462 0.00 0.00 0.00 2.71
2130 2217 5.710099 GGTTCAGATGGAGTTAATTGGACAA 59.290 40.000 0.00 0.00 0.00 3.18
2131 2218 5.014123 AGGTTCAGATGGAGTTAATTGGACA 59.986 40.000 0.00 0.00 0.00 4.02
2132 2219 5.501156 AGGTTCAGATGGAGTTAATTGGAC 58.499 41.667 0.00 0.00 0.00 4.02
2133 2220 5.779241 AGGTTCAGATGGAGTTAATTGGA 57.221 39.130 0.00 0.00 0.00 3.53
2134 2221 5.945784 TGAAGGTTCAGATGGAGTTAATTGG 59.054 40.000 0.00 0.00 32.50 3.16
2135 2222 7.391554 TCTTGAAGGTTCAGATGGAGTTAATTG 59.608 37.037 0.00 0.00 38.61 2.32
2136 2223 7.461749 TCTTGAAGGTTCAGATGGAGTTAATT 58.538 34.615 0.00 0.00 38.61 1.40
2137 2224 7.020827 TCTTGAAGGTTCAGATGGAGTTAAT 57.979 36.000 0.00 0.00 38.61 1.40
2138 2225 6.043243 ACTCTTGAAGGTTCAGATGGAGTTAA 59.957 38.462 0.00 0.00 38.61 2.01
2139 2226 5.544176 ACTCTTGAAGGTTCAGATGGAGTTA 59.456 40.000 0.00 0.00 38.61 2.24
2140 2227 4.349342 ACTCTTGAAGGTTCAGATGGAGTT 59.651 41.667 0.00 0.00 38.61 3.01
2141 2228 3.906846 ACTCTTGAAGGTTCAGATGGAGT 59.093 43.478 0.00 10.85 38.61 3.85
2142 2229 4.020751 TGACTCTTGAAGGTTCAGATGGAG 60.021 45.833 0.00 3.48 38.61 3.86
2143 2230 3.903714 TGACTCTTGAAGGTTCAGATGGA 59.096 43.478 0.00 0.00 38.61 3.41
2144 2231 4.277515 TGACTCTTGAAGGTTCAGATGG 57.722 45.455 0.00 0.00 38.61 3.51
2180 2267 4.523943 ACATGCACACACAACTGGAAATAT 59.476 37.500 0.00 0.00 0.00 1.28
2182 2269 2.694628 ACATGCACACACAACTGGAAAT 59.305 40.909 0.00 0.00 0.00 2.17
2192 2279 2.159393 AGTTTCACACACATGCACACAC 60.159 45.455 0.00 0.00 0.00 3.82
2196 2283 2.097304 TCACAGTTTCACACACATGCAC 59.903 45.455 0.00 0.00 0.00 4.57
2205 2292 2.163412 GCACCAAGTTCACAGTTTCACA 59.837 45.455 0.00 0.00 0.00 3.58
2206 2293 2.423538 AGCACCAAGTTCACAGTTTCAC 59.576 45.455 0.00 0.00 0.00 3.18
2207 2294 2.423185 CAGCACCAAGTTCACAGTTTCA 59.577 45.455 0.00 0.00 0.00 2.69
2208 2295 2.682856 TCAGCACCAAGTTCACAGTTTC 59.317 45.455 0.00 0.00 0.00 2.78
2209 2296 2.423538 GTCAGCACCAAGTTCACAGTTT 59.576 45.455 0.00 0.00 0.00 2.66
2210 2297 2.017049 GTCAGCACCAAGTTCACAGTT 58.983 47.619 0.00 0.00 0.00 3.16
2211 2298 1.210478 AGTCAGCACCAAGTTCACAGT 59.790 47.619 0.00 0.00 0.00 3.55
2212 2299 1.959042 AGTCAGCACCAAGTTCACAG 58.041 50.000 0.00 0.00 0.00 3.66
2239 2328 0.319813 GCCCACCTGAATTTGCACAC 60.320 55.000 0.00 0.00 0.00 3.82
2241 2330 0.037975 CTGCCCACCTGAATTTGCAC 60.038 55.000 0.00 0.00 0.00 4.57
2385 2474 1.954733 GCATTGGTGGCAGTGGATGTA 60.955 52.381 0.00 0.00 0.00 2.29
2420 2509 6.990349 GCTAGGGTTGTAGTAATTCATGCTAA 59.010 38.462 0.00 0.00 0.00 3.09
2421 2510 6.099125 TGCTAGGGTTGTAGTAATTCATGCTA 59.901 38.462 0.00 0.00 0.00 3.49
2451 2540 1.811266 CATGGCGGAGTCGAGGTTG 60.811 63.158 0.00 0.00 39.00 3.77
2521 2610 2.892425 CTTCGAGACGGCCATGGC 60.892 66.667 29.47 29.47 41.06 4.40
2616 2705 1.598882 CATCCTCTCGATCGGTCTGA 58.401 55.000 16.41 7.95 0.00 3.27
2618 2707 0.183971 ACCATCCTCTCGATCGGTCT 59.816 55.000 16.41 0.00 30.86 3.85
2626 2715 0.249238 GCTGTAGCACCATCCTCTCG 60.249 60.000 0.00 0.00 41.59 4.04
2633 2722 3.012518 GTCATTGAAGCTGTAGCACCAT 58.987 45.455 6.65 0.00 45.16 3.55
2634 2723 2.426522 GTCATTGAAGCTGTAGCACCA 58.573 47.619 6.65 0.69 45.16 4.17
2641 2730 1.901591 CCACTGGTCATTGAAGCTGT 58.098 50.000 0.00 0.00 0.00 4.40
2645 2734 0.883833 GTGGCCACTGGTCATTGAAG 59.116 55.000 29.12 0.00 40.40 3.02
2649 2738 1.075482 CCTGTGGCCACTGGTCATT 59.925 57.895 39.97 0.00 40.40 2.57
2662 2751 1.213013 CCGAGGACGAGAACCTGTG 59.787 63.158 0.00 0.00 42.66 3.66
2855 2944 1.078143 AAGATTGGCGACCAGGAGC 60.078 57.895 0.00 0.00 33.81 4.70
2929 3026 3.426615 AGGAGGACATATGGAGATCGTC 58.573 50.000 7.80 6.45 0.00 4.20
2934 3031 4.512942 GGGGATAAGGAGGACATATGGAGA 60.513 50.000 7.80 0.00 0.00 3.71
3037 4493 3.946558 CAGTAGGTAGGTGGACTGTAGTC 59.053 52.174 3.43 3.43 44.04 2.59
3043 4499 3.759815 ATGACAGTAGGTAGGTGGACT 57.240 47.619 0.00 0.00 0.00 3.85
3184 4640 9.959749 GTGAAATCTCTAGAAAGAGGTATACAG 57.040 37.037 5.01 0.00 42.67 2.74
3185 4641 9.702253 AGTGAAATCTCTAGAAAGAGGTATACA 57.298 33.333 5.01 0.00 42.67 2.29
3189 4645 9.976776 TTAGAGTGAAATCTCTAGAAAGAGGTA 57.023 33.333 2.75 0.00 42.67 3.08
3190 4646 8.887264 TTAGAGTGAAATCTCTAGAAAGAGGT 57.113 34.615 2.75 0.00 45.57 3.85
3212 4668 7.540055 ACTCGTTTTTCTCCGTATGTAGTTTAG 59.460 37.037 0.00 0.00 0.00 1.85
3214 4670 6.145048 CACTCGTTTTTCTCCGTATGTAGTTT 59.855 38.462 0.00 0.00 0.00 2.66
3225 4681 5.927115 AGTGTAGATTCACTCGTTTTTCTCC 59.073 40.000 0.00 0.00 44.07 3.71
3274 4730 3.909776 TTCCAGTGCGGACTATATACG 57.090 47.619 10.03 0.00 46.36 3.06
3343 4799 7.875327 TTTGTTGTAAAGTTCTTCCTAAGCT 57.125 32.000 0.00 0.00 0.00 3.74
3407 4863 4.696877 TGAGGCAATTACTCATGAGTGTTG 59.303 41.667 33.76 32.26 42.52 3.33
3448 4904 8.538409 AGTTTCAATAAACAATGATGGAAAGC 57.462 30.769 4.04 0.00 46.18 3.51
3466 4922 5.516090 GTCATCGTAAGGCAAAAGTTTCAA 58.484 37.500 0.00 0.00 38.47 2.69
3511 4967 8.698210 ACAACAATATCCAAATTGCATGTATCT 58.302 29.630 0.00 0.00 39.93 1.98
3522 4978 6.407299 GGCTTGATCCACAACAATATCCAAAT 60.407 38.462 0.00 0.00 34.56 2.32
3578 5034 1.746220 CGAAGGGTGTGTTTTTGTGGA 59.254 47.619 0.00 0.00 0.00 4.02
3596 5052 6.177610 ACAAATAGTATTTGGCTTTCTCCGA 58.822 36.000 30.02 0.00 33.92 4.55
3598 5054 8.736244 TGTAACAAATAGTATTTGGCTTTCTCC 58.264 33.333 30.02 14.50 33.92 3.71
3639 5095 9.233649 TCGGTTATTGAGTTGGTTAATTAATGT 57.766 29.630 0.31 0.00 0.00 2.71
3644 5100 8.248253 GGATTTCGGTTATTGAGTTGGTTAATT 58.752 33.333 0.00 0.00 0.00 1.40
3645 5101 7.394923 TGGATTTCGGTTATTGAGTTGGTTAAT 59.605 33.333 0.00 0.00 0.00 1.40
3676 5132 6.018994 GCATATGAACGATCTAACCGAGTTTT 60.019 38.462 6.97 0.00 0.00 2.43
3699 5155 0.894835 TATTGACGACTCAGCTGGCA 59.105 50.000 15.13 0.00 0.00 4.92
3722 5178 3.219281 GAGCTTTGTCACCCCTGTTAAA 58.781 45.455 0.00 0.00 0.00 1.52
3777 5233 6.782082 TGTTTTAAGCATGTATTATGGCCA 57.218 33.333 8.56 8.56 0.00 5.36
3798 5258 7.167924 TGGTGTGCAAAACATGATATATTGT 57.832 32.000 0.00 0.00 41.97 2.71


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.