Multiple sequence alignment - TraesCS5B01G555900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G555900 chr5B 100.000 5175 0 0 1 5175 704868969 704863795 0.000000e+00 9557.0
1 TraesCS5B01G555900 chr5B 75.676 740 115 31 4356 5054 97955142 97954427 5.030000e-80 309.0
2 TraesCS5B01G555900 chr4A 93.428 1552 63 22 16 1560 610496254 610497773 0.000000e+00 2265.0
3 TraesCS5B01G555900 chr4A 94.947 1405 42 10 2060 3442 610498196 610499593 0.000000e+00 2174.0
4 TraesCS5B01G555900 chr4A 85.489 634 74 13 3432 4055 610499610 610500235 0.000000e+00 645.0
5 TraesCS5B01G555900 chr4A 97.273 220 4 1 1803 2020 610497976 610498195 6.330000e-99 372.0
6 TraesCS5B01G555900 chr4A 96.753 154 5 0 1569 1722 610497820 610497973 1.850000e-64 257.0
7 TraesCS5B01G555900 chr4A 75.041 617 88 44 4356 4944 314146265 314145687 5.210000e-55 226.0
8 TraesCS5B01G555900 chr5D 88.548 1563 101 37 2652 4167 558271131 558272662 0.000000e+00 1823.0
9 TraesCS5B01G555900 chr5D 90.916 1354 80 25 1 1335 558269133 558270462 0.000000e+00 1779.0
10 TraesCS5B01G555900 chr5D 73.678 870 139 52 4353 5175 170476654 170477480 6.650000e-64 255.0
11 TraesCS5B01G555900 chr5D 89.796 147 9 3 1409 1555 558270461 558270601 3.180000e-42 183.0
12 TraesCS5B01G555900 chr5D 86.239 109 14 1 1409 1517 38057305 38057198 3.270000e-22 117.0
13 TraesCS5B01G555900 chr5D 85.870 92 9 4 2532 2621 558271036 558271125 1.530000e-15 95.3
14 TraesCS5B01G555900 chr4D 81.442 846 120 28 4355 5175 308473573 308474406 0.000000e+00 658.0
15 TraesCS5B01G555900 chr4D 88.391 491 47 7 4356 4842 61154016 61154500 2.690000e-162 582.0
16 TraesCS5B01G555900 chr4D 91.667 96 7 1 1721 1815 426786342 426786247 1.170000e-26 132.0
17 TraesCS5B01G555900 chr4D 93.023 86 3 3 2451 2535 215459546 215459629 7.040000e-24 122.0
18 TraesCS5B01G555900 chr6B 80.765 863 113 32 4356 5175 348691955 348691103 4.400000e-175 625.0
19 TraesCS5B01G555900 chr6B 88.424 406 38 6 4353 4751 321695520 321695923 1.010000e-131 481.0
20 TraesCS5B01G555900 chr6B 93.478 92 2 3 1721 1810 713175799 713175888 3.250000e-27 134.0
21 TraesCS5B01G555900 chr3B 90.678 472 34 5 4356 4820 481922258 481922726 2.050000e-173 619.0
22 TraesCS5B01G555900 chr3B 89.241 474 38 8 4353 4818 481930974 481931442 9.660000e-162 580.0
23 TraesCS5B01G555900 chr4B 80.257 856 126 30 4355 5175 384383905 384384752 5.730000e-169 604.0
24 TraesCS5B01G555900 chr4B 91.860 86 4 3 2451 2535 237038889 237038972 3.270000e-22 117.0
25 TraesCS5B01G555900 chr4B 91.860 86 4 3 2451 2535 237272717 237272800 3.270000e-22 117.0
26 TraesCS5B01G555900 chr4B 80.597 134 19 6 5032 5161 336338302 336338172 4.270000e-16 97.1
27 TraesCS5B01G555900 chr4B 81.308 107 18 2 4811 4916 317399822 317399927 9.230000e-13 86.1
28 TraesCS5B01G555900 chr3D 80.516 852 109 38 4356 5172 248076336 248075507 7.410000e-168 601.0
29 TraesCS5B01G555900 chr3D 91.176 102 3 5 1709 1806 311644854 311644953 3.250000e-27 134.0
30 TraesCS5B01G555900 chr7B 80.759 790 99 34 4406 5175 380725967 380726723 7.520000e-158 568.0
31 TraesCS5B01G555900 chr7B 91.837 98 3 3 1721 1817 743467967 743467874 1.170000e-26 132.0
32 TraesCS5B01G555900 chr7B 93.902 82 2 3 2455 2535 57588661 57588582 2.530000e-23 121.0
33 TraesCS5B01G555900 chr2D 88.347 472 46 4 4356 4820 276548559 276548090 4.530000e-155 558.0
34 TraesCS5B01G555900 chr2D 94.382 89 2 2 1721 1808 165009319 165009233 3.250000e-27 134.0
35 TraesCS5B01G555900 chr1B 78.788 858 116 40 4356 5175 260310342 260311171 2.760000e-142 516.0
36 TraesCS5B01G555900 chr1B 83.154 279 40 4 4904 5175 414051137 414050859 1.110000e-61 248.0
37 TraesCS5B01G555900 chr1B 93.478 92 3 2 1717 1807 555953796 555953885 3.250000e-27 134.0
38 TraesCS5B01G555900 chr6D 82.038 579 87 12 4611 5175 210609077 210608502 1.300000e-130 477.0
39 TraesCS5B01G555900 chr6D 89.247 93 6 4 2451 2542 264679066 264679155 4.240000e-21 113.0
40 TraesCS5B01G555900 chr7D 74.918 610 91 35 4604 5174 314755974 314756560 6.740000e-54 222.0
41 TraesCS5B01G555900 chr7D 93.023 86 3 3 2450 2532 542093131 542093216 7.040000e-24 122.0
42 TraesCS5B01G555900 chr2A 76.890 463 58 36 4354 4786 242202941 242203384 3.140000e-52 217.0
43 TraesCS5B01G555900 chr3A 93.333 90 3 2 1721 1809 83723321 83723234 4.210000e-26 130.0
44 TraesCS5B01G555900 chr1A 92.473 93 4 2 1715 1806 540345730 540345820 4.210000e-26 130.0
45 TraesCS5B01G555900 chr7A 93.103 87 3 3 2460 2546 350571866 350571783 1.960000e-24 124.0
46 TraesCS5B01G555900 chr5A 91.398 93 4 3 1718 1808 417902106 417902196 1.960000e-24 124.0
47 TraesCS5B01G555900 chr1D 93.902 82 2 3 2451 2531 28960917 28960996 2.530000e-23 121.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G555900 chr5B 704863795 704868969 5174 True 9557.000 9557 100.0000 1 5175 1 chr5B.!!$R2 5174
1 TraesCS5B01G555900 chr5B 97954427 97955142 715 True 309.000 309 75.6760 4356 5054 1 chr5B.!!$R1 698
2 TraesCS5B01G555900 chr4A 610496254 610500235 3981 False 1142.600 2265 93.5780 16 4055 5 chr4A.!!$F1 4039
3 TraesCS5B01G555900 chr4A 314145687 314146265 578 True 226.000 226 75.0410 4356 4944 1 chr4A.!!$R1 588
4 TraesCS5B01G555900 chr5D 558269133 558272662 3529 False 970.075 1823 88.7825 1 4167 4 chr5D.!!$F2 4166
5 TraesCS5B01G555900 chr5D 170476654 170477480 826 False 255.000 255 73.6780 4353 5175 1 chr5D.!!$F1 822
6 TraesCS5B01G555900 chr4D 308473573 308474406 833 False 658.000 658 81.4420 4355 5175 1 chr4D.!!$F3 820
7 TraesCS5B01G555900 chr6B 348691103 348691955 852 True 625.000 625 80.7650 4356 5175 1 chr6B.!!$R1 819
8 TraesCS5B01G555900 chr4B 384383905 384384752 847 False 604.000 604 80.2570 4355 5175 1 chr4B.!!$F4 820
9 TraesCS5B01G555900 chr3D 248075507 248076336 829 True 601.000 601 80.5160 4356 5172 1 chr3D.!!$R1 816
10 TraesCS5B01G555900 chr7B 380725967 380726723 756 False 568.000 568 80.7590 4406 5175 1 chr7B.!!$F1 769
11 TraesCS5B01G555900 chr1B 260310342 260311171 829 False 516.000 516 78.7880 4356 5175 1 chr1B.!!$F1 819
12 TraesCS5B01G555900 chr6D 210608502 210609077 575 True 477.000 477 82.0380 4611 5175 1 chr6D.!!$R1 564
13 TraesCS5B01G555900 chr7D 314755974 314756560 586 False 222.000 222 74.9180 4604 5174 1 chr7D.!!$F1 570

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
938 967 1.315690 CGATCTACCAGGAACGGCTA 58.684 55.0 0.00 0.0 0.00 3.93 F
1523 1568 0.322008 CTTCAGGTCAGCCCACCTTC 60.322 60.0 1.21 0.0 45.24 3.46 F
1535 1580 0.401738 CCACCTTCCTTCTGCTTCCA 59.598 55.0 0.00 0.0 0.00 3.53 F
3171 3279 0.752054 CATGGTGCTGGTTGTTGGTT 59.248 50.0 0.00 0.0 0.00 3.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1891 1973 1.274167 CATTTCCCACAGCAGCATGTT 59.726 47.619 0.00 0.00 39.31 2.71 R
3291 3399 0.327924 CATGGCAGTCCCCACAGTAA 59.672 55.000 0.00 0.00 37.79 2.24 R
3296 3404 0.618458 TTACTCATGGCAGTCCCCAC 59.382 55.000 0.00 0.00 37.79 4.61 R
4853 5108 0.031314 CAGGATCATCGGACGTCAGG 59.969 60.000 18.91 8.75 0.00 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
109 110 3.277652 GCAGCAAGCACACAAACAT 57.722 47.368 0.00 0.00 44.79 2.71
133 134 1.544724 TTGATTAGCACACCAAGGCC 58.455 50.000 0.00 0.00 0.00 5.19
173 174 3.686726 GCATAAGCAGGAATCTAATCCGG 59.313 47.826 0.00 0.00 44.60 5.14
401 402 3.665675 CTTCCTCTTGGCCCCGACG 62.666 68.421 0.00 0.00 0.00 5.12
763 788 2.196925 CCATCTCCCTCGTCCTCGG 61.197 68.421 0.00 0.00 37.69 4.63
823 851 1.443802 GCGAGGAGAAGAAAAGGTGG 58.556 55.000 0.00 0.00 0.00 4.61
925 954 3.592814 CCGCAGCCGTCCGATCTA 61.593 66.667 0.00 0.00 0.00 1.98
926 955 2.353607 CGCAGCCGTCCGATCTAC 60.354 66.667 0.00 0.00 0.00 2.59
929 958 1.360551 CAGCCGTCCGATCTACCAG 59.639 63.158 0.00 0.00 0.00 4.00
937 966 1.392710 CCGATCTACCAGGAACGGCT 61.393 60.000 0.00 0.00 42.73 5.52
938 967 1.315690 CGATCTACCAGGAACGGCTA 58.684 55.000 0.00 0.00 0.00 3.93
1110 1153 1.768077 GAGGTGAGGGATGGAGGGG 60.768 68.421 0.00 0.00 0.00 4.79
1111 1154 2.774351 GGTGAGGGATGGAGGGGG 60.774 72.222 0.00 0.00 0.00 5.40
1308 1351 2.509336 GCGTCCATCGAGGTGGTG 60.509 66.667 5.00 1.23 42.86 4.17
1517 1562 0.390472 CTCGTTCTTCAGGTCAGCCC 60.390 60.000 0.00 0.00 34.57 5.19
1518 1563 1.118965 TCGTTCTTCAGGTCAGCCCA 61.119 55.000 0.00 0.00 34.66 5.36
1522 1567 0.768221 TCTTCAGGTCAGCCCACCTT 60.768 55.000 1.21 0.00 45.24 3.50
1523 1568 0.322008 CTTCAGGTCAGCCCACCTTC 60.322 60.000 1.21 0.00 45.24 3.46
1524 1569 1.779061 TTCAGGTCAGCCCACCTTCC 61.779 60.000 1.21 0.00 45.24 3.46
1525 1570 2.208349 AGGTCAGCCCACCTTCCT 59.792 61.111 0.00 0.00 45.24 3.36
1533 1578 0.962855 GCCCACCTTCCTTCTGCTTC 60.963 60.000 0.00 0.00 0.00 3.86
1535 1580 0.401738 CCACCTTCCTTCTGCTTCCA 59.598 55.000 0.00 0.00 0.00 3.53
1581 1663 2.155279 TGTGTTAGCCTTAAATGCGCA 58.845 42.857 14.96 14.96 0.00 6.09
1596 1678 1.279539 CGCATTGTGTCGTGTTGCT 59.720 52.632 0.00 0.00 0.00 3.91
1676 1758 3.951655 CTTGTGGGCGCGCAATGTC 62.952 63.158 34.42 16.87 0.00 3.06
1700 1782 1.957113 GCTACTTGGGCTGCAAATCCT 60.957 52.381 0.50 0.00 0.00 3.24
1701 1783 1.747355 CTACTTGGGCTGCAAATCCTG 59.253 52.381 0.50 0.00 0.00 3.86
1734 1816 4.448210 TGTGAAACACTCCCTCTGTAAAC 58.552 43.478 0.00 0.00 45.67 2.01
1735 1817 4.163458 TGTGAAACACTCCCTCTGTAAACT 59.837 41.667 0.00 0.00 45.67 2.66
1747 1829 8.777578 TCCCTCTGTAAACTAATATAAGAGCA 57.222 34.615 0.00 0.00 0.00 4.26
1778 1860 8.886816 AGATTACTAACGTAGTGTTCTAAACG 57.113 34.615 0.00 0.00 45.00 3.60
1779 1861 6.911484 TTACTAACGTAGTGTTCTAAACGC 57.089 37.500 0.00 0.00 45.00 4.84
1876 1958 9.412460 AGGAAATATTTGAGATGCATTCTTGTA 57.588 29.630 5.17 0.00 33.74 2.41
1935 2017 4.180057 CTGCACTAGATGGAGTTCAGTTC 58.820 47.826 0.00 0.00 41.70 3.01
2022 2106 4.862574 GTGATGTGAACTTGCGTCATAGTA 59.137 41.667 0.00 0.00 33.82 1.82
2023 2107 5.004821 GTGATGTGAACTTGCGTCATAGTAG 59.995 44.000 0.00 0.00 33.82 2.57
2025 2109 4.733850 TGTGAACTTGCGTCATAGTAGAG 58.266 43.478 0.00 0.00 0.00 2.43
2026 2110 4.217767 TGTGAACTTGCGTCATAGTAGAGT 59.782 41.667 0.00 0.00 0.00 3.24
2027 2111 4.559251 GTGAACTTGCGTCATAGTAGAGTG 59.441 45.833 0.00 0.00 0.00 3.51
2028 2112 4.217767 TGAACTTGCGTCATAGTAGAGTGT 59.782 41.667 0.00 0.00 0.00 3.55
2029 2113 4.098055 ACTTGCGTCATAGTAGAGTGTG 57.902 45.455 0.00 0.00 0.00 3.82
2030 2114 2.561733 TGCGTCATAGTAGAGTGTGC 57.438 50.000 0.00 0.00 0.00 4.57
2031 2115 1.816224 TGCGTCATAGTAGAGTGTGCA 59.184 47.619 0.00 0.00 0.00 4.57
2032 2116 2.427095 TGCGTCATAGTAGAGTGTGCAT 59.573 45.455 0.00 0.00 0.00 3.96
2033 2117 3.119137 TGCGTCATAGTAGAGTGTGCATT 60.119 43.478 0.00 0.00 0.00 3.56
2034 2118 4.097286 TGCGTCATAGTAGAGTGTGCATTA 59.903 41.667 0.00 0.00 0.00 1.90
2035 2119 5.221244 TGCGTCATAGTAGAGTGTGCATTAT 60.221 40.000 0.00 0.00 0.00 1.28
2036 2120 5.117745 GCGTCATAGTAGAGTGTGCATTATG 59.882 44.000 0.00 0.00 0.00 1.90
2037 2121 6.209361 CGTCATAGTAGAGTGTGCATTATGT 58.791 40.000 0.00 0.00 0.00 2.29
2038 2122 6.360947 CGTCATAGTAGAGTGTGCATTATGTC 59.639 42.308 0.00 0.00 0.00 3.06
2039 2123 6.360947 GTCATAGTAGAGTGTGCATTATGTCG 59.639 42.308 0.00 0.00 0.00 4.35
2040 2124 4.983671 AGTAGAGTGTGCATTATGTCGA 57.016 40.909 0.00 0.00 0.00 4.20
2041 2125 5.521906 AGTAGAGTGTGCATTATGTCGAT 57.478 39.130 0.00 0.00 0.00 3.59
2042 2126 5.524284 AGTAGAGTGTGCATTATGTCGATC 58.476 41.667 0.00 0.00 0.00 3.69
2043 2127 3.375642 AGAGTGTGCATTATGTCGATCG 58.624 45.455 9.36 9.36 0.00 3.69
2044 2128 2.472861 GAGTGTGCATTATGTCGATCGG 59.527 50.000 16.41 0.00 0.00 4.18
2045 2129 2.159099 AGTGTGCATTATGTCGATCGGT 60.159 45.455 16.41 4.57 0.00 4.69
2046 2130 2.218759 GTGTGCATTATGTCGATCGGTC 59.781 50.000 16.41 9.60 0.00 4.79
2047 2131 1.792949 GTGCATTATGTCGATCGGTCC 59.207 52.381 16.41 4.36 0.00 4.46
2048 2132 1.686587 TGCATTATGTCGATCGGTCCT 59.313 47.619 16.41 4.93 0.00 3.85
2049 2133 2.102420 TGCATTATGTCGATCGGTCCTT 59.898 45.455 16.41 4.84 0.00 3.36
2050 2134 3.131396 GCATTATGTCGATCGGTCCTTT 58.869 45.455 16.41 0.00 0.00 3.11
2051 2135 3.560068 GCATTATGTCGATCGGTCCTTTT 59.440 43.478 16.41 0.00 0.00 2.27
2052 2136 4.748102 GCATTATGTCGATCGGTCCTTTTA 59.252 41.667 16.41 0.00 0.00 1.52
2053 2137 5.235616 GCATTATGTCGATCGGTCCTTTTAA 59.764 40.000 16.41 4.92 0.00 1.52
2054 2138 6.073222 GCATTATGTCGATCGGTCCTTTTAAT 60.073 38.462 16.41 6.85 0.00 1.40
2055 2139 7.519970 GCATTATGTCGATCGGTCCTTTTAATT 60.520 37.037 16.41 0.00 0.00 1.40
2056 2140 8.984764 CATTATGTCGATCGGTCCTTTTAATTA 58.015 33.333 16.41 0.00 0.00 1.40
2057 2141 8.583810 TTATGTCGATCGGTCCTTTTAATTAG 57.416 34.615 16.41 0.00 0.00 1.73
2058 2142 5.969423 TGTCGATCGGTCCTTTTAATTAGT 58.031 37.500 16.41 0.00 0.00 2.24
2061 2145 6.198591 GTCGATCGGTCCTTTTAATTAGTCTG 59.801 42.308 16.41 0.00 0.00 3.51
2068 2152 7.385752 CGGTCCTTTTAATTAGTCTGTGTGTAA 59.614 37.037 0.00 0.00 0.00 2.41
2132 2216 4.913335 ATTTCTAGCCTTGTGCATCATG 57.087 40.909 0.00 0.00 44.83 3.07
2193 2277 2.168521 GCCTTTTTCCTAAGGGGCAATC 59.831 50.000 4.71 0.00 44.04 2.67
2200 2294 1.284785 CCTAAGGGGCAATCTTGTGGA 59.715 52.381 0.00 0.00 0.00 4.02
3120 3228 3.573558 TCCGAAATGGAAGCGCAC 58.426 55.556 11.47 2.54 46.38 5.34
3142 3250 4.042062 ACAATGTTGTCTGATTCTCCCTCA 59.958 41.667 0.00 0.00 36.50 3.86
3156 3264 4.603131 TCTCCCTCAAGGAATTTTCATGG 58.397 43.478 0.00 0.00 46.94 3.66
3171 3279 0.752054 CATGGTGCTGGTTGTTGGTT 59.248 50.000 0.00 0.00 0.00 3.67
3200 3308 8.028938 CCCTTCAAACTTTTGTCAAGTATATGG 58.971 37.037 1.75 0.00 39.18 2.74
3221 3329 4.767928 TGGGGCTTTAATTTTACGTGATGT 59.232 37.500 0.00 0.00 0.00 3.06
3253 3361 6.816616 AAAATTTCTAGTCCCTAGGGAGAG 57.183 41.667 31.88 27.92 46.16 3.20
3291 3399 1.231963 GACCCCCTCCAAACCCATAT 58.768 55.000 0.00 0.00 0.00 1.78
3293 3401 2.787035 GACCCCCTCCAAACCCATATTA 59.213 50.000 0.00 0.00 0.00 0.98
3294 3402 2.516702 ACCCCCTCCAAACCCATATTAC 59.483 50.000 0.00 0.00 0.00 1.89
3296 3404 3.436470 CCCCCTCCAAACCCATATTACTG 60.436 52.174 0.00 0.00 0.00 2.74
3297 3405 3.204382 CCCCTCCAAACCCATATTACTGT 59.796 47.826 0.00 0.00 0.00 3.55
3298 3406 4.207165 CCCTCCAAACCCATATTACTGTG 58.793 47.826 0.00 0.00 0.00 3.66
3299 3407 4.207165 CCTCCAAACCCATATTACTGTGG 58.793 47.826 0.00 0.00 33.59 4.17
3306 3414 2.851195 CCATATTACTGTGGGGACTGC 58.149 52.381 0.00 0.00 30.29 4.40
3307 3415 2.487265 CCATATTACTGTGGGGACTGCC 60.487 54.545 0.00 0.00 30.29 4.85
3308 3416 1.959710 TATTACTGTGGGGACTGCCA 58.040 50.000 0.00 0.00 35.15 4.92
3310 3418 0.327924 TTACTGTGGGGACTGCCATG 59.672 55.000 0.00 0.00 35.15 3.66
3328 3453 4.757149 GCCATGAGTAACTGTTTTCTGAGT 59.243 41.667 0.00 0.00 0.00 3.41
3354 3479 7.950512 TCATGTGATTTACTTTTTGATGGTGT 58.049 30.769 0.00 0.00 0.00 4.16
3355 3480 8.420222 TCATGTGATTTACTTTTTGATGGTGTT 58.580 29.630 0.00 0.00 0.00 3.32
3356 3481 9.044150 CATGTGATTTACTTTTTGATGGTGTTT 57.956 29.630 0.00 0.00 0.00 2.83
3358 3483 9.522804 TGTGATTTACTTTTTGATGGTGTTTAC 57.477 29.630 0.00 0.00 0.00 2.01
3359 3484 9.744468 GTGATTTACTTTTTGATGGTGTTTACT 57.256 29.630 0.00 0.00 0.00 2.24
3360 3485 9.743057 TGATTTACTTTTTGATGGTGTTTACTG 57.257 29.630 0.00 0.00 0.00 2.74
3402 3528 4.460505 CCGACACGAACAGAAATTTAACC 58.539 43.478 0.00 0.00 0.00 2.85
3404 3536 3.880610 ACACGAACAGAAATTTAACCGC 58.119 40.909 0.00 0.00 0.00 5.68
3405 3537 3.312973 ACACGAACAGAAATTTAACCGCA 59.687 39.130 0.00 0.00 0.00 5.69
3409 3541 5.022021 CGAACAGAAATTTAACCGCAGATC 58.978 41.667 0.00 0.00 0.00 2.75
3412 3544 4.092968 ACAGAAATTTAACCGCAGATCGTC 59.907 41.667 0.00 0.00 36.19 4.20
3425 3557 2.915463 CAGATCGTCCGTACTTGACAAC 59.085 50.000 11.49 3.99 32.91 3.32
3451 3610 9.318041 CTTGAATATTGTGTTACTTGTTTCTCG 57.682 33.333 0.00 0.00 0.00 4.04
3462 3621 4.908736 ACTTGTTTCTCGAATGTGTTGTG 58.091 39.130 0.00 0.00 0.00 3.33
3464 3623 2.286125 TGTTTCTCGAATGTGTTGTGCG 60.286 45.455 0.00 0.00 0.00 5.34
3478 3640 5.238432 TGTGTTGTGCGAGATCAAAGTAAAT 59.762 36.000 0.00 0.00 0.00 1.40
3507 3669 3.153919 GTGCCTCCATTACCACAAGAAA 58.846 45.455 0.00 0.00 0.00 2.52
3510 3672 4.837860 TGCCTCCATTACCACAAGAAATTT 59.162 37.500 0.00 0.00 0.00 1.82
3540 3703 7.122948 AGAGTATACTTTCAGTACCACAGGAAG 59.877 40.741 6.88 0.00 32.84 3.46
3545 3708 7.741108 ATACTTTCAGTACCACAGGAAGTGAAG 60.741 40.741 5.83 0.00 41.15 3.02
3669 3833 3.319198 GGGCAGTCAGAACGGGGA 61.319 66.667 0.00 0.00 0.00 4.81
3670 3834 2.670148 GGGCAGTCAGAACGGGGAT 61.670 63.158 0.00 0.00 0.00 3.85
3737 3902 3.009363 TCTGTCTCATGCCTTGGATTTGA 59.991 43.478 0.00 0.00 0.00 2.69
3750 3915 4.836125 TGGATTTGAGTGTTCTTCTTGC 57.164 40.909 0.00 0.00 0.00 4.01
3765 3930 0.318955 CTTGCCCTTCTTTGCCGTTG 60.319 55.000 0.00 0.00 0.00 4.10
3826 3991 5.208294 ACTTCAACTGTATAGAGAGGGGA 57.792 43.478 3.49 0.00 0.00 4.81
3922 4088 2.127758 CACGTCGAAACTTGGCGC 60.128 61.111 0.00 0.00 0.00 6.53
3996 4171 2.952783 CATGGAAAGCATGCGCGC 60.953 61.111 27.26 27.26 45.49 6.86
4077 4252 8.495361 ACCACTAGAATACTATATAGCAGTCG 57.505 38.462 9.78 0.00 0.00 4.18
4081 4256 9.504708 ACTAGAATACTATATAGCAGTCGTTGT 57.495 33.333 9.78 5.27 0.00 3.32
4116 4291 7.013655 ACCTTAATTATCTGTTGTCATCCATGC 59.986 37.037 0.00 0.00 0.00 4.06
4141 4316 5.183713 TGTGCTGATTGAATAGAAAGGGTTG 59.816 40.000 0.00 0.00 0.00 3.77
4145 4320 6.808704 GCTGATTGAATAGAAAGGGTTGTTTC 59.191 38.462 0.00 0.00 36.79 2.78
4160 4335 4.271776 GGTTGTTTCGGCTATGTATGTACC 59.728 45.833 0.00 0.00 0.00 3.34
4167 4342 5.736813 TCGGCTATGTATGTACCTTTTGTT 58.263 37.500 0.00 0.00 0.00 2.83
4168 4343 6.174760 TCGGCTATGTATGTACCTTTTGTTT 58.825 36.000 0.00 0.00 0.00 2.83
4169 4344 6.314400 TCGGCTATGTATGTACCTTTTGTTTC 59.686 38.462 0.00 0.00 0.00 2.78
4170 4345 6.092944 CGGCTATGTATGTACCTTTTGTTTCA 59.907 38.462 0.00 0.00 0.00 2.69
4171 4346 7.201696 CGGCTATGTATGTACCTTTTGTTTCAT 60.202 37.037 0.00 0.00 0.00 2.57
4172 4347 8.129211 GGCTATGTATGTACCTTTTGTTTCATC 58.871 37.037 0.00 0.00 0.00 2.92
4173 4348 8.893727 GCTATGTATGTACCTTTTGTTTCATCT 58.106 33.333 0.00 0.00 0.00 2.90
4176 4351 8.263940 TGTATGTACCTTTTGTTTCATCTAGC 57.736 34.615 0.00 0.00 0.00 3.42
4177 4352 5.856126 TGTACCTTTTGTTTCATCTAGCG 57.144 39.130 0.00 0.00 0.00 4.26
4178 4353 5.302360 TGTACCTTTTGTTTCATCTAGCGT 58.698 37.500 0.00 0.00 0.00 5.07
4179 4354 5.407387 TGTACCTTTTGTTTCATCTAGCGTC 59.593 40.000 0.00 0.00 0.00 5.19
4180 4355 4.642429 ACCTTTTGTTTCATCTAGCGTCT 58.358 39.130 0.00 0.00 0.00 4.18
4181 4356 4.691216 ACCTTTTGTTTCATCTAGCGTCTC 59.309 41.667 0.00 0.00 0.00 3.36
4182 4357 4.093556 CCTTTTGTTTCATCTAGCGTCTCC 59.906 45.833 0.00 0.00 0.00 3.71
4183 4358 4.537135 TTTGTTTCATCTAGCGTCTCCT 57.463 40.909 0.00 0.00 0.00 3.69
4184 4359 4.537135 TTGTTTCATCTAGCGTCTCCTT 57.463 40.909 0.00 0.00 0.00 3.36
4185 4360 3.849911 TGTTTCATCTAGCGTCTCCTTG 58.150 45.455 0.00 0.00 0.00 3.61
4186 4361 3.190874 GTTTCATCTAGCGTCTCCTTGG 58.809 50.000 0.00 0.00 0.00 3.61
4187 4362 0.747255 TCATCTAGCGTCTCCTTGGC 59.253 55.000 0.00 0.00 0.00 4.52
4188 4363 0.749649 CATCTAGCGTCTCCTTGGCT 59.250 55.000 0.00 0.00 40.68 4.75
4189 4364 1.957177 CATCTAGCGTCTCCTTGGCTA 59.043 52.381 0.00 0.00 38.19 3.93
4190 4365 2.366640 TCTAGCGTCTCCTTGGCTAT 57.633 50.000 0.00 0.00 38.48 2.97
4191 4366 2.231529 TCTAGCGTCTCCTTGGCTATC 58.768 52.381 0.00 0.00 38.48 2.08
4192 4367 1.957177 CTAGCGTCTCCTTGGCTATCA 59.043 52.381 0.00 0.00 38.48 2.15
4193 4368 0.749649 AGCGTCTCCTTGGCTATCAG 59.250 55.000 0.00 0.00 34.75 2.90
4194 4369 0.461961 GCGTCTCCTTGGCTATCAGT 59.538 55.000 0.00 0.00 0.00 3.41
4195 4370 1.537135 GCGTCTCCTTGGCTATCAGTC 60.537 57.143 0.00 0.00 0.00 3.51
4196 4371 2.028130 CGTCTCCTTGGCTATCAGTCT 58.972 52.381 0.00 0.00 0.00 3.24
4197 4372 2.034053 CGTCTCCTTGGCTATCAGTCTC 59.966 54.545 0.00 0.00 0.00 3.36
4198 4373 2.364002 GTCTCCTTGGCTATCAGTCTCC 59.636 54.545 0.00 0.00 0.00 3.71
4199 4374 2.023984 TCTCCTTGGCTATCAGTCTCCA 60.024 50.000 0.00 0.00 0.00 3.86
4200 4375 2.971330 CTCCTTGGCTATCAGTCTCCAT 59.029 50.000 0.00 0.00 0.00 3.41
4201 4376 2.702478 TCCTTGGCTATCAGTCTCCATG 59.298 50.000 0.00 0.00 0.00 3.66
4202 4377 2.702478 CCTTGGCTATCAGTCTCCATGA 59.298 50.000 0.00 0.00 0.00 3.07
4203 4378 3.494048 CCTTGGCTATCAGTCTCCATGAC 60.494 52.174 0.00 0.00 45.67 3.06
4215 4390 3.935828 GTCTCCATGACAACTTTCTAGGC 59.064 47.826 0.00 0.00 44.73 3.93
4216 4391 3.055094 TCTCCATGACAACTTTCTAGGCC 60.055 47.826 0.00 0.00 0.00 5.19
4217 4392 2.026262 TCCATGACAACTTTCTAGGCCC 60.026 50.000 0.00 0.00 0.00 5.80
4218 4393 2.369394 CATGACAACTTTCTAGGCCCC 58.631 52.381 0.00 0.00 0.00 5.80
4219 4394 1.742308 TGACAACTTTCTAGGCCCCT 58.258 50.000 0.00 0.00 0.00 4.79
4220 4395 2.910544 TGACAACTTTCTAGGCCCCTA 58.089 47.619 0.00 0.00 0.00 3.53
4221 4396 2.570302 TGACAACTTTCTAGGCCCCTAC 59.430 50.000 0.00 0.00 0.00 3.18
4222 4397 1.914108 ACAACTTTCTAGGCCCCTACC 59.086 52.381 0.00 0.00 0.00 3.18
4223 4398 2.197465 CAACTTTCTAGGCCCCTACCT 58.803 52.381 0.00 0.00 44.31 3.08
4224 4399 2.170817 CAACTTTCTAGGCCCCTACCTC 59.829 54.545 0.00 0.00 41.50 3.85
4225 4400 1.652306 ACTTTCTAGGCCCCTACCTCT 59.348 52.381 0.00 0.00 41.50 3.69
4226 4401 2.863879 ACTTTCTAGGCCCCTACCTCTA 59.136 50.000 0.00 0.00 41.50 2.43
4227 4402 3.471690 ACTTTCTAGGCCCCTACCTCTAT 59.528 47.826 0.00 0.00 41.50 1.98
4228 4403 3.829728 TTCTAGGCCCCTACCTCTATC 57.170 52.381 0.00 0.00 41.50 2.08
4229 4404 2.001558 TCTAGGCCCCTACCTCTATCC 58.998 57.143 0.00 0.00 41.50 2.59
4230 4405 1.007359 CTAGGCCCCTACCTCTATCCC 59.993 61.905 0.00 0.00 41.50 3.85
4231 4406 0.710158 AGGCCCCTACCTCTATCCCT 60.710 60.000 0.00 0.00 33.62 4.20
4232 4407 1.090833 GGCCCCTACCTCTATCCCTA 58.909 60.000 0.00 0.00 0.00 3.53
4233 4408 1.007359 GGCCCCTACCTCTATCCCTAG 59.993 61.905 0.00 0.00 0.00 3.02
4234 4409 1.620251 GCCCCTACCTCTATCCCTAGC 60.620 61.905 0.00 0.00 0.00 3.42
4235 4410 2.004589 CCCCTACCTCTATCCCTAGCT 58.995 57.143 0.00 0.00 0.00 3.32
4236 4411 2.384029 CCCCTACCTCTATCCCTAGCTT 59.616 54.545 0.00 0.00 0.00 3.74
4237 4412 3.181405 CCCCTACCTCTATCCCTAGCTTT 60.181 52.174 0.00 0.00 0.00 3.51
4238 4413 3.835395 CCCTACCTCTATCCCTAGCTTTG 59.165 52.174 0.00 0.00 0.00 2.77
4239 4414 4.484912 CCTACCTCTATCCCTAGCTTTGT 58.515 47.826 0.00 0.00 0.00 2.83
4240 4415 4.525100 CCTACCTCTATCCCTAGCTTTGTC 59.475 50.000 0.00 0.00 0.00 3.18
4241 4416 2.959707 ACCTCTATCCCTAGCTTTGTCG 59.040 50.000 0.00 0.00 0.00 4.35
4242 4417 3.223435 CCTCTATCCCTAGCTTTGTCGA 58.777 50.000 0.00 0.00 0.00 4.20
4243 4418 3.004944 CCTCTATCCCTAGCTTTGTCGAC 59.995 52.174 9.11 9.11 0.00 4.20
4244 4419 2.957006 TCTATCCCTAGCTTTGTCGACC 59.043 50.000 14.12 0.00 0.00 4.79
4245 4420 1.568504 ATCCCTAGCTTTGTCGACCA 58.431 50.000 14.12 0.00 0.00 4.02
4246 4421 1.568504 TCCCTAGCTTTGTCGACCAT 58.431 50.000 14.12 0.00 0.00 3.55
4247 4422 1.906574 TCCCTAGCTTTGTCGACCATT 59.093 47.619 14.12 0.00 0.00 3.16
4248 4423 2.304761 TCCCTAGCTTTGTCGACCATTT 59.695 45.455 14.12 0.00 0.00 2.32
4249 4424 2.420022 CCCTAGCTTTGTCGACCATTTG 59.580 50.000 14.12 0.04 0.00 2.32
4250 4425 2.159517 CCTAGCTTTGTCGACCATTTGC 60.160 50.000 14.12 10.18 0.00 3.68
4251 4426 1.317613 AGCTTTGTCGACCATTTGCA 58.682 45.000 14.12 0.00 0.00 4.08
4252 4427 1.888512 AGCTTTGTCGACCATTTGCAT 59.111 42.857 14.12 0.00 0.00 3.96
4253 4428 1.987770 GCTTTGTCGACCATTTGCATG 59.012 47.619 14.12 0.00 0.00 4.06
4254 4429 1.987770 CTTTGTCGACCATTTGCATGC 59.012 47.619 14.12 11.82 0.00 4.06
4255 4430 1.246649 TTGTCGACCATTTGCATGCT 58.753 45.000 20.33 0.00 0.00 3.79
4256 4431 0.804364 TGTCGACCATTTGCATGCTC 59.196 50.000 20.33 5.74 0.00 4.26
4257 4432 0.804364 GTCGACCATTTGCATGCTCA 59.196 50.000 20.33 5.47 0.00 4.26
4258 4433 0.804364 TCGACCATTTGCATGCTCAC 59.196 50.000 20.33 2.78 0.00 3.51
4259 4434 0.522626 CGACCATTTGCATGCTCACA 59.477 50.000 20.33 0.00 0.00 3.58
4260 4435 1.068402 CGACCATTTGCATGCTCACAA 60.068 47.619 20.33 6.93 0.00 3.33
4261 4436 2.331194 GACCATTTGCATGCTCACAAC 58.669 47.619 20.33 1.60 0.00 3.32
4262 4437 1.965643 ACCATTTGCATGCTCACAACT 59.034 42.857 20.33 0.00 0.00 3.16
4263 4438 2.366266 ACCATTTGCATGCTCACAACTT 59.634 40.909 20.33 0.00 0.00 2.66
4264 4439 3.181463 ACCATTTGCATGCTCACAACTTT 60.181 39.130 20.33 0.00 0.00 2.66
4265 4440 3.185594 CCATTTGCATGCTCACAACTTTG 59.814 43.478 20.33 2.87 0.00 2.77
4266 4441 1.855513 TTGCATGCTCACAACTTTGC 58.144 45.000 20.33 0.00 0.00 3.68
4267 4442 0.745468 TGCATGCTCACAACTTTGCA 59.255 45.000 20.33 0.00 37.73 4.08
4268 4443 1.136500 TGCATGCTCACAACTTTGCAA 59.864 42.857 20.33 0.00 37.17 4.08
4269 4444 1.790623 GCATGCTCACAACTTTGCAAG 59.209 47.619 11.37 0.00 38.96 4.01
4270 4445 1.790623 CATGCTCACAACTTTGCAAGC 59.209 47.619 0.00 0.00 38.96 4.01
4271 4446 1.105457 TGCTCACAACTTTGCAAGCT 58.895 45.000 14.03 0.00 38.85 3.74
4272 4447 2.296792 TGCTCACAACTTTGCAAGCTA 58.703 42.857 14.03 0.00 38.85 3.32
4273 4448 2.033299 TGCTCACAACTTTGCAAGCTAC 59.967 45.455 14.03 0.00 38.85 3.58
4274 4449 2.033299 GCTCACAACTTTGCAAGCTACA 59.967 45.455 0.00 0.00 36.59 2.74
4275 4450 3.489059 GCTCACAACTTTGCAAGCTACAA 60.489 43.478 0.00 0.00 36.59 2.41
4276 4451 4.671377 CTCACAACTTTGCAAGCTACAAA 58.329 39.130 12.71 12.71 35.77 2.83
4277 4452 5.065704 TCACAACTTTGCAAGCTACAAAA 57.934 34.783 13.90 2.76 36.63 2.44
4278 4453 5.101628 TCACAACTTTGCAAGCTACAAAAG 58.898 37.500 13.90 12.62 36.63 2.27
4279 4454 4.864247 CACAACTTTGCAAGCTACAAAAGT 59.136 37.500 13.90 13.13 36.63 2.66
4280 4455 4.864247 ACAACTTTGCAAGCTACAAAAGTG 59.136 37.500 16.75 16.27 36.63 3.16
4281 4456 3.447742 ACTTTGCAAGCTACAAAAGTGC 58.552 40.909 15.79 8.22 36.63 4.40
4282 4457 3.119173 ACTTTGCAAGCTACAAAAGTGCA 60.119 39.130 15.79 10.48 36.63 4.57
4283 4458 3.731652 TTGCAAGCTACAAAAGTGCAT 57.268 38.095 7.75 0.00 0.00 3.96
4284 4459 3.015934 TGCAAGCTACAAAAGTGCATG 57.984 42.857 2.92 0.00 0.00 4.06
4285 4460 2.622470 TGCAAGCTACAAAAGTGCATGA 59.378 40.909 2.92 0.00 0.00 3.07
4286 4461 3.067883 TGCAAGCTACAAAAGTGCATGAA 59.932 39.130 2.92 0.00 0.00 2.57
4287 4462 3.671928 GCAAGCTACAAAAGTGCATGAAG 59.328 43.478 0.00 0.00 0.00 3.02
4288 4463 4.794003 GCAAGCTACAAAAGTGCATGAAGT 60.794 41.667 0.00 0.00 0.00 3.01
4289 4464 4.494350 AGCTACAAAAGTGCATGAAGTG 57.506 40.909 0.00 0.00 0.00 3.16
4290 4465 3.254166 AGCTACAAAAGTGCATGAAGTGG 59.746 43.478 0.00 0.00 0.00 4.00
4291 4466 3.253188 GCTACAAAAGTGCATGAAGTGGA 59.747 43.478 0.00 0.00 0.00 4.02
4296 4471 2.559785 GTGCATGAAGTGGACTGGG 58.440 57.895 0.00 0.00 44.86 4.45
4297 4472 0.962356 GTGCATGAAGTGGACTGGGG 60.962 60.000 0.00 0.00 44.86 4.96
4298 4473 1.380302 GCATGAAGTGGACTGGGGT 59.620 57.895 0.00 0.00 0.00 4.95
4299 4474 0.618458 GCATGAAGTGGACTGGGGTA 59.382 55.000 0.00 0.00 0.00 3.69
4300 4475 1.679032 GCATGAAGTGGACTGGGGTAC 60.679 57.143 0.00 0.00 0.00 3.34
4301 4476 0.902531 ATGAAGTGGACTGGGGTACG 59.097 55.000 0.00 0.00 0.00 3.67
4302 4477 0.178955 TGAAGTGGACTGGGGTACGA 60.179 55.000 0.00 0.00 0.00 3.43
4303 4478 1.192428 GAAGTGGACTGGGGTACGAT 58.808 55.000 0.00 0.00 0.00 3.73
4304 4479 0.902531 AAGTGGACTGGGGTACGATG 59.097 55.000 0.00 0.00 0.00 3.84
4305 4480 0.040646 AGTGGACTGGGGTACGATGA 59.959 55.000 0.00 0.00 0.00 2.92
4306 4481 0.899720 GTGGACTGGGGTACGATGAA 59.100 55.000 0.00 0.00 0.00 2.57
4307 4482 1.134788 GTGGACTGGGGTACGATGAAG 60.135 57.143 0.00 0.00 0.00 3.02
4308 4483 1.272816 TGGACTGGGGTACGATGAAGA 60.273 52.381 0.00 0.00 0.00 2.87
4309 4484 1.409427 GGACTGGGGTACGATGAAGAG 59.591 57.143 0.00 0.00 0.00 2.85
4310 4485 2.376109 GACTGGGGTACGATGAAGAGA 58.624 52.381 0.00 0.00 0.00 3.10
4311 4486 2.099427 GACTGGGGTACGATGAAGAGAC 59.901 54.545 0.00 0.00 0.00 3.36
4312 4487 1.065701 CTGGGGTACGATGAAGAGACG 59.934 57.143 0.00 0.00 0.00 4.18
4313 4488 1.101331 GGGGTACGATGAAGAGACGT 58.899 55.000 0.00 0.00 42.70 4.34
4314 4489 1.065251 GGGGTACGATGAAGAGACGTC 59.935 57.143 7.70 7.70 40.61 4.34
4315 4490 2.015587 GGGTACGATGAAGAGACGTCT 58.984 52.381 20.18 20.18 40.61 4.18
4316 4491 2.031930 GGGTACGATGAAGAGACGTCTC 59.968 54.545 33.52 33.52 43.17 3.36
4326 4501 1.011333 GAGACGTCTCTCTCTTCCGG 58.989 60.000 33.28 0.00 40.09 5.14
4327 4502 1.027792 AGACGTCTCTCTCTTCCGGC 61.028 60.000 13.58 0.00 0.00 6.13
4328 4503 1.995646 GACGTCTCTCTCTTCCGGCC 61.996 65.000 8.70 0.00 0.00 6.13
4329 4504 2.046864 CGTCTCTCTCTTCCGGCCA 61.047 63.158 2.24 0.00 0.00 5.36
4330 4505 1.813192 GTCTCTCTCTTCCGGCCAG 59.187 63.158 2.24 0.00 0.00 4.85
4331 4506 0.968393 GTCTCTCTCTTCCGGCCAGT 60.968 60.000 2.24 0.00 0.00 4.00
4332 4507 0.251832 TCTCTCTCTTCCGGCCAGTT 60.252 55.000 2.24 0.00 0.00 3.16
4333 4508 1.005569 TCTCTCTCTTCCGGCCAGTTA 59.994 52.381 2.24 0.00 0.00 2.24
4334 4509 1.135333 CTCTCTCTTCCGGCCAGTTAC 59.865 57.143 2.24 0.00 0.00 2.50
4335 4510 0.175989 CTCTCTTCCGGCCAGTTACC 59.824 60.000 2.24 0.00 0.00 2.85
4336 4511 0.543410 TCTCTTCCGGCCAGTTACCA 60.543 55.000 2.24 0.00 0.00 3.25
4337 4512 0.391263 CTCTTCCGGCCAGTTACCAC 60.391 60.000 2.24 0.00 0.00 4.16
4338 4513 1.122632 TCTTCCGGCCAGTTACCACA 61.123 55.000 2.24 0.00 0.00 4.17
4339 4514 0.250553 CTTCCGGCCAGTTACCACAA 60.251 55.000 2.24 0.00 0.00 3.33
4340 4515 0.250553 TTCCGGCCAGTTACCACAAG 60.251 55.000 2.24 0.00 0.00 3.16
4341 4516 1.122632 TCCGGCCAGTTACCACAAGA 61.123 55.000 2.24 0.00 0.00 3.02
4342 4517 0.250553 CCGGCCAGTTACCACAAGAA 60.251 55.000 2.24 0.00 0.00 2.52
4343 4518 0.872388 CGGCCAGTTACCACAAGAAC 59.128 55.000 2.24 0.00 0.00 3.01
4344 4519 1.542547 CGGCCAGTTACCACAAGAACT 60.543 52.381 2.24 0.00 36.31 3.01
4345 4520 2.583143 GGCCAGTTACCACAAGAACTT 58.417 47.619 0.00 0.00 33.60 2.66
4346 4521 2.552743 GGCCAGTTACCACAAGAACTTC 59.447 50.000 0.00 0.00 33.60 3.01
4347 4522 3.477530 GCCAGTTACCACAAGAACTTCT 58.522 45.455 0.00 0.00 33.60 2.85
4348 4523 3.498777 GCCAGTTACCACAAGAACTTCTC 59.501 47.826 0.00 0.00 33.60 2.87
4349 4524 3.741344 CCAGTTACCACAAGAACTTCTCG 59.259 47.826 0.00 0.00 33.60 4.04
4350 4525 3.741344 CAGTTACCACAAGAACTTCTCGG 59.259 47.826 0.00 0.00 33.60 4.63
4351 4526 3.064931 GTTACCACAAGAACTTCTCGGG 58.935 50.000 0.00 0.00 0.00 5.14
4390 4567 3.037549 ACCCTAGAGGCAGATCTTTCAG 58.962 50.000 0.00 0.00 40.58 3.02
4429 4606 4.214119 CCACGAAGAACATGAAGAACACAT 59.786 41.667 0.00 0.00 0.00 3.21
4502 4709 4.256110 TGTGCTAGATCCATGAACACAAG 58.744 43.478 0.00 0.00 33.94 3.16
4534 4742 5.305128 ACATGATCAAAACACAACAAGGGAT 59.695 36.000 0.00 0.00 0.00 3.85
4537 4746 4.647424 TCAAAACACAACAAGGGATGAC 57.353 40.909 0.00 0.00 0.00 3.06
4550 4759 1.495951 GATGACACAAACGGTCGGC 59.504 57.895 0.00 0.00 38.10 5.54
4565 4775 0.690192 TCGGCAGTTCTTCCAATCCA 59.310 50.000 0.00 0.00 0.00 3.41
4661 4873 1.443828 GAGGCCTCGGTCTCCAATC 59.556 63.158 19.06 0.00 40.68 2.67
4751 4970 6.391649 AGGGAGGAGGAGGAGTATATATAGTG 59.608 46.154 4.76 0.00 0.00 2.74
4802 5021 1.202580 GCCCTAGTCACTATGCACAGG 60.203 57.143 0.00 0.00 0.00 4.00
4869 5124 0.872021 GTGCCTGACGTCCGATGATC 60.872 60.000 14.12 0.00 0.00 2.92
4880 5135 3.413327 GTCCGATGATCCTGCTCTAGTA 58.587 50.000 0.00 0.00 0.00 1.82
4892 5147 1.376543 CTCTAGTAAGGTGTCGCCGA 58.623 55.000 0.00 0.00 43.70 5.54
4922 5207 4.477975 CGTCGGACGTCTGGAGGC 62.478 72.222 23.78 9.56 36.74 4.70
4923 5208 3.063084 GTCGGACGTCTGGAGGCT 61.063 66.667 23.78 0.00 0.00 4.58
4924 5209 2.750637 TCGGACGTCTGGAGGCTC 60.751 66.667 23.78 5.78 0.00 4.70
4925 5210 4.180946 CGGACGTCTGGAGGCTCG 62.181 72.222 16.99 4.32 0.00 5.03
4926 5211 3.063084 GGACGTCTGGAGGCTCGT 61.063 66.667 16.46 2.76 39.21 4.18
4927 5212 1.748122 GGACGTCTGGAGGCTCGTA 60.748 63.158 16.46 0.00 36.67 3.43
4928 5213 1.428620 GACGTCTGGAGGCTCGTAC 59.571 63.158 8.70 5.50 36.67 3.67
4929 5214 2.307137 GACGTCTGGAGGCTCGTACG 62.307 65.000 24.16 24.16 36.67 3.67
4930 5215 2.396955 CGTCTGGAGGCTCGTACGT 61.397 63.158 16.05 0.00 0.00 3.57
4931 5216 1.428620 GTCTGGAGGCTCGTACGTC 59.571 63.158 16.05 5.05 0.00 4.34
4932 5217 1.748122 TCTGGAGGCTCGTACGTCC 60.748 63.158 16.05 14.90 43.45 4.79
4934 5219 2.044555 TGGAGGCTCGTACGTCCAG 61.045 63.158 18.37 9.29 46.73 3.86
4935 5220 1.748122 GGAGGCTCGTACGTCCAGA 60.748 63.158 23.64 3.24 42.83 3.86
4936 5221 1.310933 GGAGGCTCGTACGTCCAGAA 61.311 60.000 23.64 2.59 42.83 3.02
4959 5246 4.332819 AGTCTTGGATTTCCGCTATTTTCG 59.667 41.667 0.00 0.00 39.43 3.46
5057 5352 2.214216 TCCGGCCACTGTAGCACTT 61.214 57.895 2.24 0.00 0.00 3.16
5059 5354 1.301716 CGGCCACTGTAGCACTTGT 60.302 57.895 2.24 0.00 0.00 3.16
5069 5364 0.184933 TAGCACTTGTTGGCTGGGTT 59.815 50.000 0.00 0.00 41.25 4.11
5076 5375 2.203625 TTGGCTGGGTTCTTGGCC 60.204 61.111 0.00 0.00 44.31 5.36
5139 5447 1.265454 CCGGAGGCTGTAGGTTCCTT 61.265 60.000 0.00 0.00 46.14 3.36
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 9.313118 CAAGTGAGTGCATTGTTATACTACATA 57.687 33.333 0.00 0.00 0.00 2.29
7 8 7.824289 ACAAGTGAGTGCATTGTTATACTACAT 59.176 33.333 0.00 0.00 33.49 2.29
9 10 7.462856 CGACAAGTGAGTGCATTGTTATACTAC 60.463 40.741 4.25 0.00 37.29 2.73
11 12 5.348724 CGACAAGTGAGTGCATTGTTATACT 59.651 40.000 4.25 0.00 37.29 2.12
12 13 5.347635 TCGACAAGTGAGTGCATTGTTATAC 59.652 40.000 4.25 0.00 37.29 1.47
13 14 5.347635 GTCGACAAGTGAGTGCATTGTTATA 59.652 40.000 11.55 0.00 37.29 0.98
14 15 4.152402 GTCGACAAGTGAGTGCATTGTTAT 59.848 41.667 11.55 0.00 37.29 1.89
105 106 7.201848 CCTTGGTGTGCTAATCAATCATATGTT 60.202 37.037 1.90 0.00 0.00 2.71
109 110 4.580167 GCCTTGGTGTGCTAATCAATCATA 59.420 41.667 0.00 0.00 0.00 2.15
133 134 7.331440 TGCTTATGCATTTGTGGATAGTTTTTG 59.669 33.333 3.54 0.00 45.31 2.44
173 174 4.855596 GACGTCAGTACCGTCCAC 57.144 61.111 11.55 0.00 46.73 4.02
203 204 2.275748 TCCGTCAGGATCCGCTCT 59.724 61.111 5.98 0.00 42.75 4.09
461 462 4.131088 GACGAGGTGGAGTCCGGC 62.131 72.222 4.30 0.00 0.00 6.13
804 829 1.443802 CCACCTTTTCTTCTCCTCGC 58.556 55.000 0.00 0.00 0.00 5.03
805 830 1.623811 TCCCACCTTTTCTTCTCCTCG 59.376 52.381 0.00 0.00 0.00 4.63
806 831 3.790089 TTCCCACCTTTTCTTCTCCTC 57.210 47.619 0.00 0.00 0.00 3.71
823 851 1.135333 TCGCGGGCCAAATAAATTTCC 59.865 47.619 6.13 0.00 0.00 3.13
866 895 1.935933 CACGTCTATTTTCGGAGGGG 58.064 55.000 0.00 0.00 0.00 4.79
925 954 0.460311 CGATCTTAGCCGTTCCTGGT 59.540 55.000 0.00 0.00 0.00 4.00
926 955 0.460311 ACGATCTTAGCCGTTCCTGG 59.540 55.000 0.00 0.00 35.21 4.45
929 958 0.249363 GGGACGATCTTAGCCGTTCC 60.249 60.000 8.14 8.14 45.81 3.62
937 966 1.048724 CAGGGCCAGGGACGATCTTA 61.049 60.000 6.18 0.00 0.00 2.10
938 967 2.041265 AGGGCCAGGGACGATCTT 59.959 61.111 6.18 0.00 0.00 2.40
1067 1096 2.125350 GCGCTTCCTCCCTCACTG 60.125 66.667 0.00 0.00 0.00 3.66
1308 1351 2.359975 CCGGTCTTGGGCTTCCAC 60.360 66.667 0.00 0.00 40.91 4.02
1517 1562 1.072965 AGTGGAAGCAGAAGGAAGGTG 59.927 52.381 0.00 0.00 0.00 4.00
1518 1563 1.439543 AGTGGAAGCAGAAGGAAGGT 58.560 50.000 0.00 0.00 0.00 3.50
1521 1566 1.143684 AGCAAGTGGAAGCAGAAGGAA 59.856 47.619 0.00 0.00 0.00 3.36
1522 1567 0.767375 AGCAAGTGGAAGCAGAAGGA 59.233 50.000 0.00 0.00 0.00 3.36
1523 1568 1.163554 GAGCAAGTGGAAGCAGAAGG 58.836 55.000 0.00 0.00 0.00 3.46
1524 1569 1.805345 CAGAGCAAGTGGAAGCAGAAG 59.195 52.381 0.00 0.00 0.00 2.85
1525 1570 1.141657 ACAGAGCAAGTGGAAGCAGAA 59.858 47.619 0.00 0.00 0.00 3.02
1551 1596 8.673711 CATTTAAGGCTAACACAATACTAAGCA 58.326 33.333 0.00 0.00 0.00 3.91
1552 1597 7.644157 GCATTTAAGGCTAACACAATACTAAGC 59.356 37.037 0.00 0.00 0.00 3.09
1553 1598 7.850982 CGCATTTAAGGCTAACACAATACTAAG 59.149 37.037 0.00 0.00 0.00 2.18
1556 1601 5.448632 GCGCATTTAAGGCTAACACAATACT 60.449 40.000 0.30 0.00 0.00 2.12
1557 1602 4.733405 GCGCATTTAAGGCTAACACAATAC 59.267 41.667 0.30 0.00 0.00 1.89
1558 1603 4.396478 TGCGCATTTAAGGCTAACACAATA 59.604 37.500 5.66 0.00 0.00 1.90
1560 1605 2.554462 TGCGCATTTAAGGCTAACACAA 59.446 40.909 5.66 0.00 0.00 3.33
1561 1606 2.155279 TGCGCATTTAAGGCTAACACA 58.845 42.857 5.66 0.00 0.00 3.72
1562 1607 2.911819 TGCGCATTTAAGGCTAACAC 57.088 45.000 5.66 0.00 0.00 3.32
1566 1611 2.752354 ACACAATGCGCATTTAAGGCTA 59.248 40.909 32.13 0.00 0.00 3.93
1567 1612 1.545582 ACACAATGCGCATTTAAGGCT 59.454 42.857 32.13 7.88 0.00 4.58
1581 1663 1.144969 CCGTAGCAACACGACACAAT 58.855 50.000 7.04 0.00 44.69 2.71
1596 1678 3.696051 AGACTAAATGGACTAACGCCGTA 59.304 43.478 0.00 0.00 0.00 4.02
1676 1758 0.889994 TTGCAGCCCAAGTAGCAATG 59.110 50.000 0.00 0.00 41.55 2.82
1700 1782 2.677836 GTGTTTCACAAGCAGAGACACA 59.322 45.455 10.81 5.06 45.30 3.72
1701 1783 2.939103 AGTGTTTCACAAGCAGAGACAC 59.061 45.455 8.42 8.42 45.93 3.67
1752 1834 9.973246 CGTTTAGAACACTACGTTAGTAATCTA 57.027 33.333 0.00 4.60 38.19 1.98
1754 1836 7.483059 AGCGTTTAGAACACTACGTTAGTAATC 59.517 37.037 0.00 0.00 38.19 1.75
1755 1837 7.308435 AGCGTTTAGAACACTACGTTAGTAAT 58.692 34.615 0.00 0.00 38.19 1.89
1756 1838 6.668323 AGCGTTTAGAACACTACGTTAGTAA 58.332 36.000 0.00 0.00 38.19 2.24
1757 1839 6.147821 AGAGCGTTTAGAACACTACGTTAGTA 59.852 38.462 0.00 0.00 38.19 1.82
1758 1840 5.049129 AGAGCGTTTAGAACACTACGTTAGT 60.049 40.000 0.00 0.00 38.19 2.24
1759 1841 5.388944 AGAGCGTTTAGAACACTACGTTAG 58.611 41.667 0.00 0.00 38.19 2.34
1760 1842 5.362556 AGAGCGTTTAGAACACTACGTTA 57.637 39.130 0.00 0.00 38.19 3.18
1761 1843 4.234530 AGAGCGTTTAGAACACTACGTT 57.765 40.909 0.00 0.00 41.86 3.99
1762 1844 3.911661 AGAGCGTTTAGAACACTACGT 57.088 42.857 0.00 0.00 0.00 3.57
1763 1845 8.557869 AATATAAGAGCGTTTAGAACACTACG 57.442 34.615 0.00 0.00 0.00 3.51
1771 1853 9.669353 CCGTAAACTAATATAAGAGCGTTTAGA 57.331 33.333 0.00 0.00 30.36 2.10
1772 1854 9.669353 TCCGTAAACTAATATAAGAGCGTTTAG 57.331 33.333 0.00 0.00 30.36 1.85
1773 1855 9.669353 CTCCGTAAACTAATATAAGAGCGTTTA 57.331 33.333 0.00 0.00 0.00 2.01
1774 1856 7.650903 CCTCCGTAAACTAATATAAGAGCGTTT 59.349 37.037 0.00 0.00 0.00 3.60
1775 1857 7.144000 CCTCCGTAAACTAATATAAGAGCGTT 58.856 38.462 0.00 0.00 0.00 4.84
1776 1858 6.294397 CCCTCCGTAAACTAATATAAGAGCGT 60.294 42.308 0.00 0.00 0.00 5.07
1777 1859 6.091437 CCCTCCGTAAACTAATATAAGAGCG 58.909 44.000 0.00 0.00 0.00 5.03
1778 1860 6.014755 ACCCCTCCGTAAACTAATATAAGAGC 60.015 42.308 0.00 0.00 0.00 4.09
1779 1861 7.536159 ACCCCTCCGTAAACTAATATAAGAG 57.464 40.000 0.00 0.00 0.00 2.85
1780 1862 8.004215 TGTACCCCTCCGTAAACTAATATAAGA 58.996 37.037 0.00 0.00 0.00 2.10
1789 1871 3.647590 TCTTTTGTACCCCTCCGTAAACT 59.352 43.478 0.00 0.00 0.00 2.66
1790 1872 4.006780 TCTTTTGTACCCCTCCGTAAAC 57.993 45.455 0.00 0.00 0.00 2.01
1876 1958 4.097437 CAGCATGTTCCTTTCATGTAGCAT 59.903 41.667 7.55 0.00 42.94 3.79
1891 1973 1.274167 CATTTCCCACAGCAGCATGTT 59.726 47.619 0.00 0.00 39.31 2.71
2022 2106 3.375642 CGATCGACATAATGCACACTCT 58.624 45.455 10.26 0.00 0.00 3.24
2023 2107 2.472861 CCGATCGACATAATGCACACTC 59.527 50.000 18.66 0.00 0.00 3.51
2025 2109 2.201732 ACCGATCGACATAATGCACAC 58.798 47.619 18.66 0.00 0.00 3.82
2026 2110 2.469826 GACCGATCGACATAATGCACA 58.530 47.619 18.66 0.00 0.00 4.57
2027 2111 1.792949 GGACCGATCGACATAATGCAC 59.207 52.381 18.66 0.00 0.00 4.57
2028 2112 1.686587 AGGACCGATCGACATAATGCA 59.313 47.619 18.66 0.00 0.00 3.96
2029 2113 2.440539 AGGACCGATCGACATAATGC 57.559 50.000 18.66 0.00 0.00 3.56
2030 2114 6.838198 TTAAAAGGACCGATCGACATAATG 57.162 37.500 18.66 0.00 0.00 1.90
2031 2115 9.204570 CTAATTAAAAGGACCGATCGACATAAT 57.795 33.333 18.66 8.24 0.00 1.28
2032 2116 8.199449 ACTAATTAAAAGGACCGATCGACATAA 58.801 33.333 18.66 6.34 0.00 1.90
2033 2117 7.719483 ACTAATTAAAAGGACCGATCGACATA 58.281 34.615 18.66 0.00 0.00 2.29
2034 2118 6.579865 ACTAATTAAAAGGACCGATCGACAT 58.420 36.000 18.66 5.09 0.00 3.06
2035 2119 5.969423 ACTAATTAAAAGGACCGATCGACA 58.031 37.500 18.66 0.00 0.00 4.35
2036 2120 6.198591 CAGACTAATTAAAAGGACCGATCGAC 59.801 42.308 18.66 10.14 0.00 4.20
2037 2121 6.127535 ACAGACTAATTAAAAGGACCGATCGA 60.128 38.462 18.66 0.00 0.00 3.59
2038 2122 6.019801 CACAGACTAATTAAAAGGACCGATCG 60.020 42.308 8.51 8.51 0.00 3.69
2039 2123 6.817140 ACACAGACTAATTAAAAGGACCGATC 59.183 38.462 0.00 0.00 0.00 3.69
2040 2124 6.594159 CACACAGACTAATTAAAAGGACCGAT 59.406 38.462 0.00 0.00 0.00 4.18
2041 2125 5.929992 CACACAGACTAATTAAAAGGACCGA 59.070 40.000 0.00 0.00 0.00 4.69
2042 2126 5.699458 ACACACAGACTAATTAAAAGGACCG 59.301 40.000 0.00 0.00 0.00 4.79
2043 2127 8.611654 TTACACACAGACTAATTAAAAGGACC 57.388 34.615 0.00 0.00 0.00 4.46
2052 2136 8.840321 GGCATGAATATTACACACAGACTAATT 58.160 33.333 0.00 0.00 0.00 1.40
2053 2137 7.992608 TGGCATGAATATTACACACAGACTAAT 59.007 33.333 0.00 0.00 0.00 1.73
2054 2138 7.334858 TGGCATGAATATTACACACAGACTAA 58.665 34.615 0.00 0.00 0.00 2.24
2055 2139 6.883744 TGGCATGAATATTACACACAGACTA 58.116 36.000 0.00 0.00 0.00 2.59
2056 2140 5.744171 TGGCATGAATATTACACACAGACT 58.256 37.500 0.00 0.00 0.00 3.24
2057 2141 6.624352 ATGGCATGAATATTACACACAGAC 57.376 37.500 0.00 0.00 0.00 3.51
2058 2142 6.427853 GCTATGGCATGAATATTACACACAGA 59.572 38.462 10.98 0.00 38.54 3.41
2061 2145 6.808008 AGCTATGGCATGAATATTACACAC 57.192 37.500 10.98 0.00 41.70 3.82
2068 2152 9.745018 AAACAGTATAAGCTATGGCATGAATAT 57.255 29.630 10.98 6.24 41.70 1.28
2193 2277 2.009774 CCCAACTAGCGATTCCACAAG 58.990 52.381 0.00 0.00 0.00 3.16
2200 2294 1.815421 CGCAGCCCAACTAGCGATT 60.815 57.895 0.00 0.00 43.85 3.34
3120 3228 4.582869 TGAGGGAGAATCAGACAACATTG 58.417 43.478 0.00 0.00 36.25 2.82
3142 3250 3.242011 ACCAGCACCATGAAAATTCCTT 58.758 40.909 0.00 0.00 0.00 3.36
3156 3264 0.809636 GGCAAACCAACAACCAGCAC 60.810 55.000 0.00 0.00 35.26 4.40
3171 3279 4.020662 ACTTGACAAAAGTTTGAAGGGCAA 60.021 37.500 10.66 5.95 40.55 4.52
3200 3308 7.008901 GCTAAACATCACGTAAAATTAAAGCCC 59.991 37.037 0.00 0.00 0.00 5.19
3253 3361 3.058708 GGTCGGCAAACTAAAACTGTACC 60.059 47.826 0.00 0.00 0.00 3.34
3291 3399 0.327924 CATGGCAGTCCCCACAGTAA 59.672 55.000 0.00 0.00 37.79 2.24
3293 3401 1.845627 CTCATGGCAGTCCCCACAGT 61.846 60.000 0.00 0.00 37.79 3.55
3294 3402 1.077930 CTCATGGCAGTCCCCACAG 60.078 63.158 0.00 0.00 37.79 3.66
3296 3404 0.618458 TTACTCATGGCAGTCCCCAC 59.382 55.000 0.00 0.00 37.79 4.61
3297 3405 0.618458 GTTACTCATGGCAGTCCCCA 59.382 55.000 0.00 0.00 39.65 4.96
3298 3406 0.912486 AGTTACTCATGGCAGTCCCC 59.088 55.000 0.00 0.00 0.00 4.81
3299 3407 1.279271 ACAGTTACTCATGGCAGTCCC 59.721 52.381 0.00 0.00 0.00 4.46
3301 3409 4.757149 AGAAAACAGTTACTCATGGCAGTC 59.243 41.667 0.00 0.00 0.00 3.51
3302 3410 4.516698 CAGAAAACAGTTACTCATGGCAGT 59.483 41.667 0.00 0.00 0.00 4.40
3303 3411 4.756642 TCAGAAAACAGTTACTCATGGCAG 59.243 41.667 0.00 0.00 0.00 4.85
3304 3412 4.713553 TCAGAAAACAGTTACTCATGGCA 58.286 39.130 0.00 0.00 0.00 4.92
3305 3413 4.757149 ACTCAGAAAACAGTTACTCATGGC 59.243 41.667 0.00 0.00 0.00 4.40
3306 3414 6.483307 TGAACTCAGAAAACAGTTACTCATGG 59.517 38.462 0.00 0.00 32.83 3.66
3307 3415 7.482654 TGAACTCAGAAAACAGTTACTCATG 57.517 36.000 0.00 0.00 32.83 3.07
3308 3416 7.716998 ACATGAACTCAGAAAACAGTTACTCAT 59.283 33.333 0.00 0.00 32.83 2.90
3310 3418 7.224753 TCACATGAACTCAGAAAACAGTTACTC 59.775 37.037 0.00 0.00 32.83 2.59
3328 3453 8.420222 ACACCATCAAAAAGTAAATCACATGAA 58.580 29.630 0.00 0.00 0.00 2.57
3354 3479 7.011669 GCACTTGGAAGTACACTAAACAGTAAA 59.988 37.037 0.00 0.00 37.08 2.01
3355 3480 6.480981 GCACTTGGAAGTACACTAAACAGTAA 59.519 38.462 0.00 0.00 37.08 2.24
3356 3481 5.987347 GCACTTGGAAGTACACTAAACAGTA 59.013 40.000 0.00 0.00 37.08 2.74
3357 3482 4.814771 GCACTTGGAAGTACACTAAACAGT 59.185 41.667 0.00 0.00 37.08 3.55
3358 3483 4.213482 GGCACTTGGAAGTACACTAAACAG 59.787 45.833 0.00 0.00 37.08 3.16
3359 3484 4.131596 GGCACTTGGAAGTACACTAAACA 58.868 43.478 0.00 0.00 37.08 2.83
3360 3485 3.185797 CGGCACTTGGAAGTACACTAAAC 59.814 47.826 0.00 0.00 37.08 2.01
3387 3512 5.022021 CGATCTGCGGTTAAATTTCTGTTC 58.978 41.667 0.00 0.00 36.03 3.18
3404 3536 2.913777 TGTCAAGTACGGACGATCTG 57.086 50.000 13.61 0.00 38.10 2.90
3405 3537 2.818432 AGTTGTCAAGTACGGACGATCT 59.182 45.455 12.08 9.19 38.10 2.75
3409 3541 2.734670 TCAAGTTGTCAAGTACGGACG 58.265 47.619 13.61 0.00 38.10 4.79
3412 3544 7.015289 CACAATATTCAAGTTGTCAAGTACGG 58.985 38.462 2.11 0.00 36.48 4.02
3425 3557 9.318041 CGAGAAACAAGTAACACAATATTCAAG 57.682 33.333 0.00 0.00 0.00 3.02
3451 3610 3.811722 TTGATCTCGCACAACACATTC 57.188 42.857 0.00 0.00 0.00 2.67
3462 3621 7.061094 CACTGGAAAAATTTACTTTGATCTCGC 59.939 37.037 0.00 0.00 0.00 5.03
3464 3623 7.329471 GGCACTGGAAAAATTTACTTTGATCTC 59.671 37.037 0.00 0.00 0.00 2.75
3478 3640 3.161866 GGTAATGGAGGCACTGGAAAAA 58.838 45.455 0.00 0.00 41.55 1.94
3713 3877 2.704464 TCCAAGGCATGAGACAGATG 57.296 50.000 0.00 0.00 0.00 2.90
3719 3883 3.245016 ACACTCAAATCCAAGGCATGAGA 60.245 43.478 16.94 0.00 39.85 3.27
3737 3902 3.584733 AAGAAGGGCAAGAAGAACACT 57.415 42.857 0.00 0.00 0.00 3.55
3750 3915 2.163613 GGATTACAACGGCAAAGAAGGG 59.836 50.000 0.00 0.00 0.00 3.95
3838 4003 0.175531 TGAAATCTGAGATCCGCGCA 59.824 50.000 8.75 0.00 0.00 6.09
3906 4071 3.698463 CGCGCCAAGTTTCGACGT 61.698 61.111 0.00 0.00 0.00 4.34
3996 4171 2.293122 TCCTGCAAAATTGTTCCTCGTG 59.707 45.455 0.00 0.00 0.00 4.35
4026 4201 5.064441 ACATTCCAAAATGAAGCTAGTGC 57.936 39.130 5.22 0.00 44.25 4.40
4073 4248 2.595238 AGGTTCTACAGGACAACGACT 58.405 47.619 0.00 0.00 0.00 4.18
4076 4251 7.980099 AGATAATTAAGGTTCTACAGGACAACG 59.020 37.037 0.00 0.00 0.00 4.10
4077 4252 9.099454 CAGATAATTAAGGTTCTACAGGACAAC 57.901 37.037 0.00 0.00 0.00 3.32
4081 4256 8.822805 ACAACAGATAATTAAGGTTCTACAGGA 58.177 33.333 0.00 0.00 0.00 3.86
4116 4291 4.946157 ACCCTTTCTATTCAATCAGCACAG 59.054 41.667 0.00 0.00 0.00 3.66
4141 4316 6.093082 ACAAAAGGTACATACATAGCCGAAAC 59.907 38.462 0.00 0.00 0.00 2.78
4145 4320 6.092944 TGAAACAAAAGGTACATACATAGCCG 59.907 38.462 0.00 0.00 0.00 5.52
4160 4335 4.932200 AGGAGACGCTAGATGAAACAAAAG 59.068 41.667 0.00 0.00 0.00 2.27
4167 4342 1.137086 GCCAAGGAGACGCTAGATGAA 59.863 52.381 0.00 0.00 0.00 2.57
4168 4343 0.747255 GCCAAGGAGACGCTAGATGA 59.253 55.000 0.00 0.00 0.00 2.92
4169 4344 0.749649 AGCCAAGGAGACGCTAGATG 59.250 55.000 0.00 0.00 0.00 2.90
4170 4345 2.366640 TAGCCAAGGAGACGCTAGAT 57.633 50.000 0.00 0.00 34.03 1.98
4171 4346 2.231529 GATAGCCAAGGAGACGCTAGA 58.768 52.381 0.00 0.00 38.43 2.43
4172 4347 1.957177 TGATAGCCAAGGAGACGCTAG 59.043 52.381 0.00 0.00 38.43 3.42
4173 4348 1.957177 CTGATAGCCAAGGAGACGCTA 59.043 52.381 0.00 0.00 39.31 4.26
4174 4349 0.749649 CTGATAGCCAAGGAGACGCT 59.250 55.000 0.00 0.00 36.63 5.07
4175 4350 0.461961 ACTGATAGCCAAGGAGACGC 59.538 55.000 0.00 0.00 0.00 5.19
4176 4351 2.028130 AGACTGATAGCCAAGGAGACG 58.972 52.381 0.00 0.00 0.00 4.18
4177 4352 2.364002 GGAGACTGATAGCCAAGGAGAC 59.636 54.545 0.00 0.00 0.00 3.36
4178 4353 2.023984 TGGAGACTGATAGCCAAGGAGA 60.024 50.000 0.00 0.00 0.00 3.71
4179 4354 2.392662 TGGAGACTGATAGCCAAGGAG 58.607 52.381 0.00 0.00 0.00 3.69
4180 4355 2.550277 TGGAGACTGATAGCCAAGGA 57.450 50.000 0.00 0.00 0.00 3.36
4181 4356 2.702478 TCATGGAGACTGATAGCCAAGG 59.298 50.000 0.00 0.00 33.51 3.61
4182 4357 3.726607 GTCATGGAGACTGATAGCCAAG 58.273 50.000 0.00 0.00 44.09 3.61
4183 4358 3.827008 GTCATGGAGACTGATAGCCAA 57.173 47.619 0.00 0.00 44.09 4.52
4194 4369 3.055094 GGCCTAGAAAGTTGTCATGGAGA 60.055 47.826 0.00 0.00 0.00 3.71
4195 4370 3.274288 GGCCTAGAAAGTTGTCATGGAG 58.726 50.000 0.00 0.00 0.00 3.86
4196 4371 2.026262 GGGCCTAGAAAGTTGTCATGGA 60.026 50.000 0.84 0.00 0.00 3.41
4197 4372 2.369394 GGGCCTAGAAAGTTGTCATGG 58.631 52.381 0.84 0.00 0.00 3.66
4198 4373 2.025887 AGGGGCCTAGAAAGTTGTCATG 60.026 50.000 0.84 0.00 0.00 3.07
4199 4374 2.279173 AGGGGCCTAGAAAGTTGTCAT 58.721 47.619 0.84 0.00 0.00 3.06
4200 4375 1.742308 AGGGGCCTAGAAAGTTGTCA 58.258 50.000 0.84 0.00 0.00 3.58
4201 4376 2.093075 GGTAGGGGCCTAGAAAGTTGTC 60.093 54.545 0.84 0.00 0.00 3.18
4202 4377 1.914108 GGTAGGGGCCTAGAAAGTTGT 59.086 52.381 0.84 0.00 0.00 3.32
4203 4378 2.170817 GAGGTAGGGGCCTAGAAAGTTG 59.829 54.545 0.84 0.00 39.34 3.16
4204 4379 2.046025 AGAGGTAGGGGCCTAGAAAGTT 59.954 50.000 0.84 0.00 39.34 2.66
4205 4380 1.652306 AGAGGTAGGGGCCTAGAAAGT 59.348 52.381 0.84 0.00 39.34 2.66
4206 4381 2.480642 AGAGGTAGGGGCCTAGAAAG 57.519 55.000 0.84 0.00 39.34 2.62
4207 4382 3.181409 GGATAGAGGTAGGGGCCTAGAAA 60.181 52.174 0.84 0.00 39.34 2.52
4208 4383 2.382649 GGATAGAGGTAGGGGCCTAGAA 59.617 54.545 0.84 0.00 39.34 2.10
4209 4384 2.001558 GGATAGAGGTAGGGGCCTAGA 58.998 57.143 0.84 0.00 39.34 2.43
4210 4385 1.007359 GGGATAGAGGTAGGGGCCTAG 59.993 61.905 0.84 0.00 39.34 3.02
4211 4386 1.090833 GGGATAGAGGTAGGGGCCTA 58.909 60.000 0.84 0.00 39.34 3.93
4212 4387 0.710158 AGGGATAGAGGTAGGGGCCT 60.710 60.000 0.84 0.00 42.53 5.19
4213 4388 1.007359 CTAGGGATAGAGGTAGGGGCC 59.993 61.905 0.00 0.00 0.00 5.80
4214 4389 1.620251 GCTAGGGATAGAGGTAGGGGC 60.620 61.905 0.00 0.00 0.00 5.80
4215 4390 2.004589 AGCTAGGGATAGAGGTAGGGG 58.995 57.143 0.00 0.00 0.00 4.79
4216 4391 3.835395 CAAAGCTAGGGATAGAGGTAGGG 59.165 52.174 0.00 0.00 0.00 3.53
4217 4392 4.484912 ACAAAGCTAGGGATAGAGGTAGG 58.515 47.826 0.00 0.00 0.00 3.18
4218 4393 4.216687 CGACAAAGCTAGGGATAGAGGTAG 59.783 50.000 0.00 0.00 0.00 3.18
4219 4394 4.141321 TCGACAAAGCTAGGGATAGAGGTA 60.141 45.833 0.00 0.00 0.00 3.08
4220 4395 2.959707 CGACAAAGCTAGGGATAGAGGT 59.040 50.000 0.00 0.00 0.00 3.85
4221 4396 3.004944 GTCGACAAAGCTAGGGATAGAGG 59.995 52.174 11.55 0.00 0.00 3.69
4222 4397 3.004944 GGTCGACAAAGCTAGGGATAGAG 59.995 52.174 18.91 0.00 0.00 2.43
4223 4398 2.957006 GGTCGACAAAGCTAGGGATAGA 59.043 50.000 18.91 0.00 0.00 1.98
4224 4399 2.693591 TGGTCGACAAAGCTAGGGATAG 59.306 50.000 18.91 0.00 0.00 2.08
4225 4400 2.742348 TGGTCGACAAAGCTAGGGATA 58.258 47.619 18.91 0.00 0.00 2.59
4226 4401 1.568504 TGGTCGACAAAGCTAGGGAT 58.431 50.000 18.91 0.00 0.00 3.85
4227 4402 1.568504 ATGGTCGACAAAGCTAGGGA 58.431 50.000 18.91 0.00 0.00 4.20
4228 4403 2.403252 AATGGTCGACAAAGCTAGGG 57.597 50.000 18.91 0.00 0.00 3.53
4229 4404 2.159517 GCAAATGGTCGACAAAGCTAGG 60.160 50.000 18.91 0.00 0.00 3.02
4230 4405 2.483877 TGCAAATGGTCGACAAAGCTAG 59.516 45.455 18.91 1.73 0.00 3.42
4231 4406 2.499197 TGCAAATGGTCGACAAAGCTA 58.501 42.857 18.91 1.44 0.00 3.32
4232 4407 1.317613 TGCAAATGGTCGACAAAGCT 58.682 45.000 18.91 0.00 0.00 3.74
4233 4408 1.987770 CATGCAAATGGTCGACAAAGC 59.012 47.619 18.91 12.65 0.00 3.51
4234 4409 1.987770 GCATGCAAATGGTCGACAAAG 59.012 47.619 18.91 1.87 0.00 2.77
4235 4410 1.612950 AGCATGCAAATGGTCGACAAA 59.387 42.857 21.98 5.15 0.00 2.83
4236 4411 1.199789 GAGCATGCAAATGGTCGACAA 59.800 47.619 21.98 6.46 38.95 3.18
4237 4412 0.804364 GAGCATGCAAATGGTCGACA 59.196 50.000 21.98 3.91 38.95 4.35
4238 4413 3.611433 GAGCATGCAAATGGTCGAC 57.389 52.632 21.98 7.13 38.95 4.20
4241 4416 2.029649 AGTTGTGAGCATGCAAATGGTC 60.030 45.455 21.98 11.66 46.11 4.02
4242 4417 1.965643 AGTTGTGAGCATGCAAATGGT 59.034 42.857 21.98 0.00 34.63 3.55
4243 4418 2.736144 AGTTGTGAGCATGCAAATGG 57.264 45.000 21.98 0.00 0.00 3.16
4244 4419 3.363575 GCAAAGTTGTGAGCATGCAAATG 60.364 43.478 21.98 6.64 34.10 2.32
4245 4420 2.803956 GCAAAGTTGTGAGCATGCAAAT 59.196 40.909 21.98 0.96 34.10 2.32
4246 4421 2.203401 GCAAAGTTGTGAGCATGCAAA 58.797 42.857 21.98 4.05 34.10 3.68
4247 4422 1.136500 TGCAAAGTTGTGAGCATGCAA 59.864 42.857 21.98 4.48 40.47 4.08
4248 4423 0.745468 TGCAAAGTTGTGAGCATGCA 59.255 45.000 21.98 0.00 41.08 3.96
4249 4424 1.790623 CTTGCAAAGTTGTGAGCATGC 59.209 47.619 10.51 10.51 39.70 4.06
4262 4437 3.516981 TGCACTTTTGTAGCTTGCAAA 57.483 38.095 4.55 8.05 34.47 3.68
4263 4438 3.067883 TCATGCACTTTTGTAGCTTGCAA 59.932 39.130 10.74 0.00 34.72 4.08
4264 4439 2.622470 TCATGCACTTTTGTAGCTTGCA 59.378 40.909 9.26 9.26 34.72 4.08
4265 4440 3.287312 TCATGCACTTTTGTAGCTTGC 57.713 42.857 0.00 0.00 34.72 4.01
4266 4441 4.678287 CACTTCATGCACTTTTGTAGCTTG 59.322 41.667 0.00 0.00 35.33 4.01
4267 4442 4.261741 CCACTTCATGCACTTTTGTAGCTT 60.262 41.667 0.00 0.00 0.00 3.74
4268 4443 3.254166 CCACTTCATGCACTTTTGTAGCT 59.746 43.478 0.00 0.00 0.00 3.32
4269 4444 3.253188 TCCACTTCATGCACTTTTGTAGC 59.747 43.478 0.00 0.00 0.00 3.58
4270 4445 4.516698 AGTCCACTTCATGCACTTTTGTAG 59.483 41.667 0.00 0.00 0.00 2.74
4271 4446 4.275689 CAGTCCACTTCATGCACTTTTGTA 59.724 41.667 0.00 0.00 0.00 2.41
4272 4447 3.067180 CAGTCCACTTCATGCACTTTTGT 59.933 43.478 0.00 0.00 0.00 2.83
4273 4448 3.551454 CCAGTCCACTTCATGCACTTTTG 60.551 47.826 0.00 0.00 0.00 2.44
4274 4449 2.624838 CCAGTCCACTTCATGCACTTTT 59.375 45.455 0.00 0.00 0.00 2.27
4275 4450 2.233271 CCAGTCCACTTCATGCACTTT 58.767 47.619 0.00 0.00 0.00 2.66
4276 4451 1.546323 CCCAGTCCACTTCATGCACTT 60.546 52.381 0.00 0.00 0.00 3.16
4277 4452 0.037303 CCCAGTCCACTTCATGCACT 59.963 55.000 0.00 0.00 0.00 4.40
4278 4453 0.962356 CCCCAGTCCACTTCATGCAC 60.962 60.000 0.00 0.00 0.00 4.57
4279 4454 1.379916 CCCCAGTCCACTTCATGCA 59.620 57.895 0.00 0.00 0.00 3.96
4280 4455 0.618458 TACCCCAGTCCACTTCATGC 59.382 55.000 0.00 0.00 0.00 4.06
4281 4456 1.405526 CGTACCCCAGTCCACTTCATG 60.406 57.143 0.00 0.00 0.00 3.07
4282 4457 0.902531 CGTACCCCAGTCCACTTCAT 59.097 55.000 0.00 0.00 0.00 2.57
4283 4458 0.178955 TCGTACCCCAGTCCACTTCA 60.179 55.000 0.00 0.00 0.00 3.02
4284 4459 1.134788 CATCGTACCCCAGTCCACTTC 60.135 57.143 0.00 0.00 0.00 3.01
4285 4460 0.902531 CATCGTACCCCAGTCCACTT 59.097 55.000 0.00 0.00 0.00 3.16
4286 4461 0.040646 TCATCGTACCCCAGTCCACT 59.959 55.000 0.00 0.00 0.00 4.00
4287 4462 0.899720 TTCATCGTACCCCAGTCCAC 59.100 55.000 0.00 0.00 0.00 4.02
4288 4463 1.191535 CTTCATCGTACCCCAGTCCA 58.808 55.000 0.00 0.00 0.00 4.02
4289 4464 1.409427 CTCTTCATCGTACCCCAGTCC 59.591 57.143 0.00 0.00 0.00 3.85
4290 4465 2.099427 GTCTCTTCATCGTACCCCAGTC 59.901 54.545 0.00 0.00 0.00 3.51
4291 4466 2.100989 GTCTCTTCATCGTACCCCAGT 58.899 52.381 0.00 0.00 0.00 4.00
4292 4467 1.065701 CGTCTCTTCATCGTACCCCAG 59.934 57.143 0.00 0.00 0.00 4.45
4293 4468 1.100510 CGTCTCTTCATCGTACCCCA 58.899 55.000 0.00 0.00 0.00 4.96
4294 4469 1.065251 GACGTCTCTTCATCGTACCCC 59.935 57.143 8.70 0.00 37.92 4.95
4295 4470 2.015587 AGACGTCTCTTCATCGTACCC 58.984 52.381 13.58 0.00 37.92 3.69
4296 4471 3.322230 GAGACGTCTCTTCATCGTACC 57.678 52.381 33.28 7.47 39.81 3.34
4308 4483 1.027792 GCCGGAAGAGAGAGACGTCT 61.028 60.000 20.18 20.18 34.86 4.18
4309 4484 1.430228 GCCGGAAGAGAGAGACGTC 59.570 63.158 5.05 7.70 0.00 4.34
4310 4485 2.047443 GGCCGGAAGAGAGAGACGT 61.047 63.158 5.05 0.00 0.00 4.34
4311 4486 1.999071 CTGGCCGGAAGAGAGAGACG 61.999 65.000 5.28 0.00 0.00 4.18
4312 4487 0.968393 ACTGGCCGGAAGAGAGAGAC 60.968 60.000 21.41 0.00 0.00 3.36
4313 4488 0.251832 AACTGGCCGGAAGAGAGAGA 60.252 55.000 21.41 0.00 0.00 3.10
4314 4489 1.135333 GTAACTGGCCGGAAGAGAGAG 59.865 57.143 21.41 0.00 0.00 3.20
4315 4490 1.183549 GTAACTGGCCGGAAGAGAGA 58.816 55.000 21.41 0.00 0.00 3.10
4316 4491 0.175989 GGTAACTGGCCGGAAGAGAG 59.824 60.000 21.41 0.00 0.00 3.20
4317 4492 0.543410 TGGTAACTGGCCGGAAGAGA 60.543 55.000 21.41 0.00 37.61 3.10
4318 4493 0.391263 GTGGTAACTGGCCGGAAGAG 60.391 60.000 21.41 1.00 37.61 2.85
4319 4494 1.122632 TGTGGTAACTGGCCGGAAGA 61.123 55.000 21.41 0.00 37.61 2.87
4320 4495 0.250553 TTGTGGTAACTGGCCGGAAG 60.251 55.000 21.41 3.88 37.61 3.46
4321 4496 0.250553 CTTGTGGTAACTGGCCGGAA 60.251 55.000 21.41 2.35 37.61 4.30
4322 4497 1.122632 TCTTGTGGTAACTGGCCGGA 61.123 55.000 21.41 0.00 37.61 5.14
4323 4498 0.250553 TTCTTGTGGTAACTGGCCGG 60.251 55.000 11.02 11.02 37.61 6.13
4324 4499 0.872388 GTTCTTGTGGTAACTGGCCG 59.128 55.000 0.00 0.00 37.61 6.13
4325 4500 2.271944 AGTTCTTGTGGTAACTGGCC 57.728 50.000 0.00 0.00 34.70 5.36
4326 4501 3.477530 AGAAGTTCTTGTGGTAACTGGC 58.522 45.455 0.00 0.00 36.12 4.85
4327 4502 3.741344 CGAGAAGTTCTTGTGGTAACTGG 59.259 47.826 6.88 0.00 36.12 4.00
4328 4503 3.741344 CCGAGAAGTTCTTGTGGTAACTG 59.259 47.826 17.25 0.00 36.12 3.16
4329 4504 3.244112 CCCGAGAAGTTCTTGTGGTAACT 60.244 47.826 17.25 0.00 37.54 2.24
4330 4505 3.064931 CCCGAGAAGTTCTTGTGGTAAC 58.935 50.000 17.25 0.00 0.00 2.50
4331 4506 2.967201 TCCCGAGAAGTTCTTGTGGTAA 59.033 45.455 17.25 3.19 0.00 2.85
4332 4507 2.561419 CTCCCGAGAAGTTCTTGTGGTA 59.439 50.000 17.25 2.90 0.00 3.25
4333 4508 1.344763 CTCCCGAGAAGTTCTTGTGGT 59.655 52.381 17.25 0.00 0.00 4.16
4334 4509 1.344763 ACTCCCGAGAAGTTCTTGTGG 59.655 52.381 17.25 16.67 0.00 4.17
4335 4510 2.802816 CAACTCCCGAGAAGTTCTTGTG 59.197 50.000 17.25 7.71 0.00 3.33
4336 4511 2.698797 TCAACTCCCGAGAAGTTCTTGT 59.301 45.455 17.25 5.34 0.00 3.16
4337 4512 3.386768 TCAACTCCCGAGAAGTTCTTG 57.613 47.619 12.62 12.62 0.00 3.02
4338 4513 3.325135 ACATCAACTCCCGAGAAGTTCTT 59.675 43.478 6.88 0.00 0.00 2.52
4339 4514 2.900546 ACATCAACTCCCGAGAAGTTCT 59.099 45.455 4.68 4.68 0.00 3.01
4340 4515 3.320673 ACATCAACTCCCGAGAAGTTC 57.679 47.619 0.00 0.00 0.00 3.01
4341 4516 3.195825 CCTACATCAACTCCCGAGAAGTT 59.804 47.826 0.00 0.00 0.00 2.66
4342 4517 2.761208 CCTACATCAACTCCCGAGAAGT 59.239 50.000 0.00 0.00 0.00 3.01
4343 4518 2.101582 CCCTACATCAACTCCCGAGAAG 59.898 54.545 0.00 0.00 0.00 2.85
4344 4519 2.108168 CCCTACATCAACTCCCGAGAA 58.892 52.381 0.00 0.00 0.00 2.87
4345 4520 1.006758 ACCCTACATCAACTCCCGAGA 59.993 52.381 0.00 0.00 0.00 4.04
4346 4521 1.137086 CACCCTACATCAACTCCCGAG 59.863 57.143 0.00 0.00 0.00 4.63
4347 4522 1.191535 CACCCTACATCAACTCCCGA 58.808 55.000 0.00 0.00 0.00 5.14
4348 4523 0.178068 CCACCCTACATCAACTCCCG 59.822 60.000 0.00 0.00 0.00 5.14
4349 4524 1.580059 TCCACCCTACATCAACTCCC 58.420 55.000 0.00 0.00 0.00 4.30
4350 4525 2.355818 GGTTCCACCCTACATCAACTCC 60.356 54.545 0.00 0.00 30.04 3.85
4351 4526 2.987232 GGTTCCACCCTACATCAACTC 58.013 52.381 0.00 0.00 30.04 3.01
4380 4557 3.203934 CCCCTCCAAATCCTGAAAGATCT 59.796 47.826 0.00 0.00 34.07 2.75
4390 4567 0.186143 GTGGGATCCCCTCCAAATCC 59.814 60.000 28.58 0.00 46.98 3.01
4429 4606 2.415983 TCCTCTTGTTTCCCCTCTCA 57.584 50.000 0.00 0.00 0.00 3.27
4502 4709 7.119699 TGTTGTGTTTTGATCATGTATCTCTCC 59.880 37.037 0.00 0.00 35.45 3.71
4534 4742 1.885388 CTGCCGACCGTTTGTGTCA 60.885 57.895 0.00 0.00 32.91 3.58
4537 4746 1.157870 AGAACTGCCGACCGTTTGTG 61.158 55.000 0.00 0.00 0.00 3.33
4550 4759 5.434408 TCTCATCATGGATTGGAAGAACTG 58.566 41.667 0.00 0.00 0.00 3.16
4565 4775 4.202545 GGATTCAAGACCCCATCTCATCAT 60.203 45.833 0.00 0.00 36.27 2.45
4661 4873 5.928264 TGCTCATCCATTTGATACATACTCG 59.072 40.000 0.00 0.00 30.56 4.18
4693 4905 6.969473 GCATTGGTTTAGCTCATTTTAGAGAC 59.031 38.462 0.00 0.00 37.87 3.36
4760 4979 2.193536 GGCCCATGTACCCATTCGC 61.194 63.158 0.00 0.00 0.00 4.70
4853 5108 0.031314 CAGGATCATCGGACGTCAGG 59.969 60.000 18.91 8.75 0.00 3.86
4855 5110 1.037579 AGCAGGATCATCGGACGTCA 61.038 55.000 18.91 0.00 0.00 4.35
4869 5124 1.202313 GCGACACCTTACTAGAGCAGG 60.202 57.143 0.00 0.65 0.00 4.85
4880 5135 1.375523 GGACATTCGGCGACACCTT 60.376 57.895 10.16 0.00 35.61 3.50
4911 5182 2.396955 CGTACGAGCCTCCAGACGT 61.397 63.158 10.44 0.00 41.66 4.34
4921 5206 0.803740 AGACTTCTGGACGTACGAGC 59.196 55.000 24.41 13.11 0.00 5.03
4922 5207 2.414293 CCAAGACTTCTGGACGTACGAG 60.414 54.545 24.41 9.35 0.00 4.18
4923 5208 1.538512 CCAAGACTTCTGGACGTACGA 59.461 52.381 24.41 0.00 0.00 3.43
4924 5209 1.538512 TCCAAGACTTCTGGACGTACG 59.461 52.381 15.01 15.01 0.00 3.67
4925 5210 3.870633 ATCCAAGACTTCTGGACGTAC 57.129 47.619 0.00 0.00 34.19 3.67
4926 5211 4.322499 GGAAATCCAAGACTTCTGGACGTA 60.322 45.833 0.00 0.00 34.19 3.57
4927 5212 3.557264 GGAAATCCAAGACTTCTGGACGT 60.557 47.826 0.00 0.00 34.19 4.34
4928 5213 3.003480 GGAAATCCAAGACTTCTGGACG 58.997 50.000 0.00 0.00 34.19 4.79
4929 5214 3.003480 CGGAAATCCAAGACTTCTGGAC 58.997 50.000 0.00 0.00 34.19 4.02
4930 5215 2.615493 GCGGAAATCCAAGACTTCTGGA 60.615 50.000 0.00 0.00 35.14 3.86
4931 5216 1.740025 GCGGAAATCCAAGACTTCTGG 59.260 52.381 0.00 0.00 35.14 3.86
4932 5217 2.704572 AGCGGAAATCCAAGACTTCTG 58.295 47.619 0.00 0.00 35.14 3.02
4933 5218 4.762289 ATAGCGGAAATCCAAGACTTCT 57.238 40.909 0.00 0.00 35.14 2.85
4934 5219 5.819825 AAATAGCGGAAATCCAAGACTTC 57.180 39.130 0.00 0.00 35.14 3.01
4935 5220 5.163754 CGAAAATAGCGGAAATCCAAGACTT 60.164 40.000 0.00 0.00 35.14 3.01
4936 5221 4.332819 CGAAAATAGCGGAAATCCAAGACT 59.667 41.667 0.00 0.00 35.14 3.24
4959 5246 1.577328 CCGGTGCCACATCACAGAAC 61.577 60.000 0.00 0.00 38.66 3.01
4986 5276 2.677228 CGGATGACCAAGCCCCTT 59.323 61.111 0.00 0.00 35.59 3.95
5057 5352 1.832167 GCCAAGAACCCAGCCAACA 60.832 57.895 0.00 0.00 0.00 3.33
5059 5354 2.203625 GGCCAAGAACCCAGCCAA 60.204 61.111 0.00 0.00 45.07 4.52
5069 5364 3.842925 GAACACCAGCCGGCCAAGA 62.843 63.158 26.15 0.00 34.57 3.02
5139 5447 1.538047 GACCAAATGGAAGAGCTGCA 58.462 50.000 6.42 0.00 38.94 4.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.