Multiple sequence alignment - TraesCS5B01G555200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G555200 chr5B 100.000 4320 0 0 1 4320 704478066 704482385 0.000000e+00 7978.0
1 TraesCS5B01G555200 chr5B 91.019 2973 153 51 480 3378 704825128 704822196 0.000000e+00 3906.0
2 TraesCS5B01G555200 chr5B 87.383 1490 160 16 1100 2576 704760634 704759160 0.000000e+00 1685.0
3 TraesCS5B01G555200 chr5B 79.617 2296 402 41 1088 3347 704528532 704530797 0.000000e+00 1587.0
4 TraesCS5B01G555200 chr5B 84.757 1522 189 29 1092 2576 704498304 704499819 0.000000e+00 1485.0
5 TraesCS5B01G555200 chr5B 98.945 379 4 0 3613 3991 522473853 522474231 0.000000e+00 678.0
6 TraesCS5B01G555200 chr5B 88.978 499 43 8 953 1447 704722592 704723082 1.330000e-169 606.0
7 TraesCS5B01G555200 chr5B 98.571 210 3 0 4111 4320 704821932 704821723 5.280000e-99 372.0
8 TraesCS5B01G555200 chr5B 89.286 56 0 1 632 687 704497740 704497789 1.000000e-06 65.8
9 TraesCS5B01G555200 chr4A 92.112 3220 149 43 450 3615 611204171 611201003 0.000000e+00 4442.0
10 TraesCS5B01G555200 chr4A 91.134 2301 116 35 480 2730 610639648 610641910 0.000000e+00 3038.0
11 TraesCS5B01G555200 chr4A 86.770 1489 170 16 1100 2576 610706856 610708329 0.000000e+00 1633.0
12 TraesCS5B01G555200 chr4A 85.414 1522 179 29 1092 2576 611073538 611072023 0.000000e+00 1541.0
13 TraesCS5B01G555200 chr4A 81.891 1618 271 19 1087 2695 610818308 610816704 0.000000e+00 1345.0
14 TraesCS5B01G555200 chr4A 97.175 531 12 1 2851 3378 610641910 610642440 0.000000e+00 894.0
15 TraesCS5B01G555200 chr4A 99.217 383 2 1 3610 3991 36409160 36409542 0.000000e+00 689.0
16 TraesCS5B01G555200 chr4A 88.283 495 45 4 953 1447 611024995 611025476 8.050000e-162 580.0
17 TraesCS5B01G555200 chr4A 96.353 329 11 1 3992 4320 611196204 611195877 1.370000e-149 540.0
18 TraesCS5B01G555200 chr4A 97.619 210 5 0 4111 4320 610642704 610642913 1.140000e-95 361.0
19 TraesCS5B01G555200 chr4A 82.299 435 42 17 7 408 611204578 611204146 1.150000e-90 344.0
20 TraesCS5B01G555200 chr4A 96.825 126 4 0 3490 3615 611196319 611196194 1.220000e-50 211.0
21 TraesCS5B01G555200 chr7B 98.961 385 4 0 3607 3991 675829112 675828728 0.000000e+00 689.0
22 TraesCS5B01G555200 chr7B 98.945 379 4 0 3613 3991 680532935 680533313 0.000000e+00 678.0
23 TraesCS5B01G555200 chr6A 99.211 380 3 0 3612 3991 606710797 606710418 0.000000e+00 686.0
24 TraesCS5B01G555200 chr3B 99.213 381 2 1 3613 3993 41968220 41967841 0.000000e+00 686.0
25 TraesCS5B01G555200 chr2A 98.705 386 4 1 3613 3998 27732637 27732253 0.000000e+00 684.0
26 TraesCS5B01G555200 chr7A 98.695 383 4 1 3613 3995 673024300 673023919 0.000000e+00 678.0
27 TraesCS5B01G555200 chr2B 98.945 379 4 0 3613 3991 620638719 620639097 0.000000e+00 678.0
28 TraesCS5B01G555200 chr4B 85.106 94 12 2 4006 4099 450468405 450468496 1.280000e-15 95.3
29 TraesCS5B01G555200 chr4D 82.022 89 11 3 4006 4094 365851890 365851973 2.160000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G555200 chr5B 704478066 704482385 4319 False 7978.0 7978 100.000000 1 4320 1 chr5B.!!$F2 4319
1 TraesCS5B01G555200 chr5B 704821723 704825128 3405 True 2139.0 3906 94.795000 480 4320 2 chr5B.!!$R2 3840
2 TraesCS5B01G555200 chr5B 704759160 704760634 1474 True 1685.0 1685 87.383000 1100 2576 1 chr5B.!!$R1 1476
3 TraesCS5B01G555200 chr5B 704528532 704530797 2265 False 1587.0 1587 79.617000 1088 3347 1 chr5B.!!$F3 2259
4 TraesCS5B01G555200 chr5B 704497740 704499819 2079 False 775.4 1485 87.021500 632 2576 2 chr5B.!!$F5 1944
5 TraesCS5B01G555200 chr4A 611201003 611204578 3575 True 2393.0 4442 87.205500 7 3615 2 chr4A.!!$R4 3608
6 TraesCS5B01G555200 chr4A 610706856 610708329 1473 False 1633.0 1633 86.770000 1100 2576 1 chr4A.!!$F2 1476
7 TraesCS5B01G555200 chr4A 611072023 611073538 1515 True 1541.0 1541 85.414000 1092 2576 1 chr4A.!!$R2 1484
8 TraesCS5B01G555200 chr4A 610639648 610642913 3265 False 1431.0 3038 95.309333 480 4320 3 chr4A.!!$F4 3840
9 TraesCS5B01G555200 chr4A 610816704 610818308 1604 True 1345.0 1345 81.891000 1087 2695 1 chr4A.!!$R1 1608

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
173 176 0.035317 ATGCTTGTGAGAGGACGCAA 59.965 50.000 0.00 0.0 38.34 4.85 F
577 619 0.180406 ATCCCCATCGTTTTCCTCGG 59.820 55.000 0.00 0.0 0.00 4.63 F
579 621 0.180406 CCCCATCGTTTTCCTCGGAT 59.820 55.000 0.00 0.0 0.00 4.18 F
814 874 0.249398 GCCTCTGCTTTCCGAGGTTA 59.751 55.000 7.12 0.0 46.75 2.85 F
878 978 0.250989 CGCCCTTGTCCCCAGTAAAA 60.251 55.000 0.00 0.0 0.00 1.52 F
1061 1314 0.740149 GCGAATCATTGCCATCACCA 59.260 50.000 0.00 0.0 0.00 4.17 F
1062 1315 1.268896 GCGAATCATTGCCATCACCAG 60.269 52.381 0.00 0.0 0.00 4.00 F
1063 1316 1.335810 CGAATCATTGCCATCACCAGG 59.664 52.381 0.00 0.0 0.00 4.45 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1189 1442 0.317436 CGGCTGTCGACTATCTGCTC 60.317 60.000 17.92 6.75 42.43 4.26 R
1511 1818 0.602638 CGGCACTGGTTCTTACAGCA 60.603 55.000 0.00 0.00 39.55 4.41 R
1674 1981 2.301346 CTCTTCAACCAACTTGCCACT 58.699 47.619 0.00 0.00 0.00 4.00 R
2546 2864 3.991367 ACTTACGTGCAGCTCTAACTTT 58.009 40.909 0.00 0.00 0.00 2.66 R
3016 3487 2.046023 AGGCGCACATAAGCAGCA 60.046 55.556 10.83 0.00 36.34 4.41 R
3076 3547 3.005554 CAGGCTCTTCATGTCGTTGAAT 58.994 45.455 0.00 0.00 35.20 2.57 R
3100 3571 4.558178 TGCATGCTTCAAAACCTGTAATG 58.442 39.130 20.33 0.00 0.00 1.90 R
3379 3856 0.899717 TCTGCTGCCCCCAACATTTC 60.900 55.000 0.00 0.00 0.00 2.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 2.281276 AGGGAAAACCACCGCGTC 60.281 61.111 4.92 0.00 43.89 5.19
31 32 1.890510 GGAAAACCACCGCGTCACT 60.891 57.895 4.92 0.00 0.00 3.41
32 33 1.278637 GAAAACCACCGCGTCACTG 59.721 57.895 4.92 0.00 0.00 3.66
43 44 1.999735 CGCGTCACTGTCATGGTTATT 59.000 47.619 0.00 0.00 0.00 1.40
50 51 6.344500 GTCACTGTCATGGTTATTGAGATCT 58.656 40.000 0.00 0.00 0.00 2.75
51 52 6.478344 GTCACTGTCATGGTTATTGAGATCTC 59.522 42.308 16.21 16.21 0.00 2.75
54 55 7.011202 CACTGTCATGGTTATTGAGATCTCTTG 59.989 40.741 22.95 4.84 0.00 3.02
63 64 1.829849 TGAGATCTCTTGAGGCACCAG 59.170 52.381 22.95 0.00 0.00 4.00
84 85 2.112190 CCCTTCCCTCTACTGTCTTCC 58.888 57.143 0.00 0.00 0.00 3.46
85 86 2.559931 CCCTTCCCTCTACTGTCTTCCA 60.560 54.545 0.00 0.00 0.00 3.53
88 89 0.818296 CCCTCTACTGTCTTCCACGG 59.182 60.000 0.00 0.00 37.41 4.94
90 91 0.888619 CTCTACTGTCTTCCACGGCA 59.111 55.000 0.00 0.00 34.19 5.69
93 94 1.204704 CTACTGTCTTCCACGGCATCA 59.795 52.381 0.00 0.00 34.19 3.07
94 95 0.615331 ACTGTCTTCCACGGCATCAT 59.385 50.000 0.00 0.00 34.19 2.45
99 100 1.138859 TCTTCCACGGCATCATGTAGG 59.861 52.381 0.00 0.00 0.00 3.18
143 146 2.342279 TCGAAAGAGGGCGTGTGG 59.658 61.111 0.00 0.00 34.84 4.17
146 149 1.566018 CGAAAGAGGGCGTGTGGAAC 61.566 60.000 0.00 0.00 37.35 3.62
150 153 1.303317 GAGGGCGTGTGGAACCATT 60.303 57.895 0.00 0.00 34.36 3.16
151 154 1.586154 GAGGGCGTGTGGAACCATTG 61.586 60.000 0.00 0.00 34.36 2.82
170 173 1.134995 TGCTATGCTTGTGAGAGGACG 60.135 52.381 0.00 0.00 0.00 4.79
172 175 0.894835 TATGCTTGTGAGAGGACGCA 59.105 50.000 0.00 0.00 0.00 5.24
173 176 0.035317 ATGCTTGTGAGAGGACGCAA 59.965 50.000 0.00 0.00 38.34 4.85
196 199 0.725686 CAAGAGGCAATGCGAGTGAG 59.274 55.000 0.00 0.00 0.00 3.51
209 212 3.391382 GTGAGGGGTCGGGTGGAG 61.391 72.222 0.00 0.00 0.00 3.86
223 226 2.287608 GGGTGGAGCGAAACTTTTTCTG 60.288 50.000 0.00 0.00 0.00 3.02
236 239 1.823169 TTTTCTGGAGGGACGACCGG 61.823 60.000 0.00 0.00 46.96 5.28
243 246 2.359478 GGGACGACCGGCACATTT 60.359 61.111 0.00 0.00 36.97 2.32
244 247 2.396157 GGGACGACCGGCACATTTC 61.396 63.158 0.00 0.00 36.97 2.17
305 308 9.612066 ATTTGTTTGCCCTATAATAATGGTTTG 57.388 29.630 0.00 0.00 0.00 2.93
306 309 7.118496 TGTTTGCCCTATAATAATGGTTTGG 57.882 36.000 0.00 0.00 0.00 3.28
386 415 3.211000 AGATCCCCTTACCCAGAGAAGAT 59.789 47.826 0.00 0.00 0.00 2.40
387 416 2.764269 TCCCCTTACCCAGAGAAGATG 58.236 52.381 0.00 0.00 0.00 2.90
388 417 2.045885 TCCCCTTACCCAGAGAAGATGT 59.954 50.000 0.00 0.00 0.00 3.06
389 418 2.171448 CCCCTTACCCAGAGAAGATGTG 59.829 54.545 0.00 0.00 0.00 3.21
390 419 3.107601 CCCTTACCCAGAGAAGATGTGA 58.892 50.000 0.00 0.00 0.00 3.58
391 420 3.519510 CCCTTACCCAGAGAAGATGTGAA 59.480 47.826 0.00 0.00 0.00 3.18
392 421 4.019321 CCCTTACCCAGAGAAGATGTGAAA 60.019 45.833 0.00 0.00 0.00 2.69
393 422 5.339530 CCCTTACCCAGAGAAGATGTGAAAT 60.340 44.000 0.00 0.00 0.00 2.17
394 423 6.183347 CCTTACCCAGAGAAGATGTGAAATT 58.817 40.000 0.00 0.00 0.00 1.82
395 424 7.338710 CCTTACCCAGAGAAGATGTGAAATTA 58.661 38.462 0.00 0.00 0.00 1.40
396 425 7.829211 CCTTACCCAGAGAAGATGTGAAATTAA 59.171 37.037 0.00 0.00 0.00 1.40
397 426 8.792830 TTACCCAGAGAAGATGTGAAATTAAG 57.207 34.615 0.00 0.00 0.00 1.85
398 427 7.020827 ACCCAGAGAAGATGTGAAATTAAGA 57.979 36.000 0.00 0.00 0.00 2.10
399 428 7.637511 ACCCAGAGAAGATGTGAAATTAAGAT 58.362 34.615 0.00 0.00 0.00 2.40
400 429 7.555554 ACCCAGAGAAGATGTGAAATTAAGATG 59.444 37.037 0.00 0.00 0.00 2.90
401 430 7.555554 CCCAGAGAAGATGTGAAATTAAGATGT 59.444 37.037 0.00 0.00 0.00 3.06
402 431 8.396390 CCAGAGAAGATGTGAAATTAAGATGTG 58.604 37.037 0.00 0.00 0.00 3.21
403 432 9.159364 CAGAGAAGATGTGAAATTAAGATGTGA 57.841 33.333 0.00 0.00 0.00 3.58
404 433 9.160496 AGAGAAGATGTGAAATTAAGATGTGAC 57.840 33.333 0.00 0.00 0.00 3.67
405 434 8.853077 AGAAGATGTGAAATTAAGATGTGACA 57.147 30.769 0.00 0.00 0.00 3.58
406 435 8.725148 AGAAGATGTGAAATTAAGATGTGACAC 58.275 33.333 0.00 0.00 0.00 3.67
407 436 7.984422 AGATGTGAAATTAAGATGTGACACA 57.016 32.000 11.41 11.41 40.35 3.72
408 437 8.571461 AGATGTGAAATTAAGATGTGACACAT 57.429 30.769 20.95 20.95 45.82 3.21
409 438 8.456471 AGATGTGAAATTAAGATGTGACACATG 58.544 33.333 25.45 0.00 44.11 3.21
410 439 7.509141 TGTGAAATTAAGATGTGACACATGT 57.491 32.000 25.45 18.80 39.27 3.21
411 440 8.614469 TGTGAAATTAAGATGTGACACATGTA 57.386 30.769 25.45 13.90 39.27 2.29
412 441 9.230122 TGTGAAATTAAGATGTGACACATGTAT 57.770 29.630 25.45 10.14 39.27 2.29
455 484 8.691661 ATACATGACTACTTTTTGTGGACTTT 57.308 30.769 0.00 0.00 0.00 2.66
471 500 7.648142 TGTGGACTTTGAAATTAAGATGTGAC 58.352 34.615 0.00 0.00 0.00 3.67
511 540 9.691362 GAGTTCTTTTTGGATTGTGCTTAATAA 57.309 29.630 0.00 0.00 0.00 1.40
512 541 9.696917 AGTTCTTTTTGGATTGTGCTTAATAAG 57.303 29.630 0.00 0.00 0.00 1.73
569 602 1.064685 GGACCAGAAATCCCCATCGTT 60.065 52.381 0.00 0.00 0.00 3.85
575 617 3.378427 CAGAAATCCCCATCGTTTTCCTC 59.622 47.826 0.00 0.00 0.00 3.71
576 618 2.038387 AATCCCCATCGTTTTCCTCG 57.962 50.000 0.00 0.00 0.00 4.63
577 619 0.180406 ATCCCCATCGTTTTCCTCGG 59.820 55.000 0.00 0.00 0.00 4.63
578 620 0.905809 TCCCCATCGTTTTCCTCGGA 60.906 55.000 0.00 0.00 0.00 4.55
579 621 0.180406 CCCCATCGTTTTCCTCGGAT 59.820 55.000 0.00 0.00 0.00 4.18
580 622 1.414919 CCCCATCGTTTTCCTCGGATA 59.585 52.381 0.00 0.00 0.00 2.59
591 633 2.385803 TCCTCGGATACCTTCCTTGTC 58.614 52.381 0.00 0.00 42.99 3.18
629 677 1.437986 CTCTTTACTCCCCGCCGAG 59.562 63.158 0.00 0.00 35.88 4.63
720 768 1.534697 CTACCTCTCCTCCTCCGCT 59.465 63.158 0.00 0.00 0.00 5.52
723 771 2.757508 CTCTCCTCCTCCGCTGCA 60.758 66.667 0.00 0.00 0.00 4.41
724 772 3.071206 TCTCCTCCTCCGCTGCAC 61.071 66.667 0.00 0.00 0.00 4.57
770 818 3.202706 GCCATCGCCGTTTCCCTC 61.203 66.667 0.00 0.00 0.00 4.30
802 862 3.880846 CGCAATTCCGGCCTCTGC 61.881 66.667 0.00 1.71 0.00 4.26
807 867 0.681243 AATTCCGGCCTCTGCTTTCC 60.681 55.000 0.00 0.00 37.74 3.13
813 873 1.003233 GCCTCTGCTTTCCGAGGTT 60.003 57.895 7.12 0.00 46.75 3.50
814 874 0.249398 GCCTCTGCTTTCCGAGGTTA 59.751 55.000 7.12 0.00 46.75 2.85
815 875 1.338769 GCCTCTGCTTTCCGAGGTTAA 60.339 52.381 7.12 0.00 46.75 2.01
817 877 2.742589 CCTCTGCTTTCCGAGGTTAAAC 59.257 50.000 0.00 0.00 41.49 2.01
878 978 0.250989 CGCCCTTGTCCCCAGTAAAA 60.251 55.000 0.00 0.00 0.00 1.52
892 992 5.523552 CCCCAGTAAAAGAAGCAACTTTTTG 59.476 40.000 20.06 14.85 44.33 2.44
911 1013 7.489435 ACTTTTTGTTTTTGTGTTTGTTTTGGG 59.511 29.630 0.00 0.00 0.00 4.12
937 1039 1.407575 GCTAGGGGGCTTGACTTCTTC 60.408 57.143 0.00 0.00 0.00 2.87
944 1046 3.004839 GGGGCTTGACTTCTTCTGAAAAC 59.995 47.826 0.00 0.00 0.00 2.43
985 1238 5.221422 TGTTTTAATTGGGCTTCTCCTTGTG 60.221 40.000 0.00 0.00 34.39 3.33
998 1251 5.243426 TCTCCTTGTGTTTTGCAGTTTAC 57.757 39.130 0.00 0.00 0.00 2.01
1017 1270 3.814504 ACAATGGGGAACATTCTCACT 57.185 42.857 0.00 0.00 46.67 3.41
1060 1313 3.557207 GCGAATCATTGCCATCACC 57.443 52.632 0.00 0.00 0.00 4.02
1061 1314 0.740149 GCGAATCATTGCCATCACCA 59.260 50.000 0.00 0.00 0.00 4.17
1062 1315 1.268896 GCGAATCATTGCCATCACCAG 60.269 52.381 0.00 0.00 0.00 4.00
1063 1316 1.335810 CGAATCATTGCCATCACCAGG 59.664 52.381 0.00 0.00 0.00 4.45
1064 1317 2.658285 GAATCATTGCCATCACCAGGA 58.342 47.619 0.00 0.00 0.00 3.86
1161 1414 1.798626 TCAGGGCTATGTCTGAGCAT 58.201 50.000 0.00 0.00 41.98 3.79
1168 1421 6.153510 CAGGGCTATGTCTGAGCATATAGTAA 59.846 42.308 0.00 0.00 41.98 2.24
1199 1452 4.161942 AGCATTCTGTCAAGAGCAGATAGT 59.838 41.667 0.00 0.00 41.87 2.12
1201 1454 4.362932 TTCTGTCAAGAGCAGATAGTCG 57.637 45.455 0.00 0.00 41.87 4.18
1331 1590 1.736126 GTCTGACTACATCCGTCACGA 59.264 52.381 0.00 0.00 36.54 4.35
1415 1721 2.358737 CCAGCCCGTCTGTTGGTC 60.359 66.667 1.99 0.00 41.25 4.02
1427 1733 2.098607 TCTGTTGGTCGCGGATTACTAG 59.901 50.000 6.13 0.00 0.00 2.57
1450 1756 6.055588 AGTTTCTACTTGTGTGCAACTACAT 58.944 36.000 0.00 0.00 38.04 2.29
1511 1818 3.795688 TCAAAGTTGCCTCTGGAAGAT 57.204 42.857 0.00 0.00 45.62 2.40
1607 1914 9.768662 GATGGAAATAAAATATGTGGCAAGAAT 57.231 29.630 0.00 0.00 0.00 2.40
1720 2027 7.011295 GCTTGAAATCAAAATTGAGTTGAACCA 59.989 33.333 12.91 3.15 44.40 3.67
2546 2864 5.013079 TCTGAGGTCTGCTCCTTTAATTGAA 59.987 40.000 0.00 0.00 38.02 2.69
2655 2979 4.466015 TGTCAAGGCACTACACATCTCATA 59.534 41.667 0.00 0.00 38.49 2.15
3100 3571 0.671781 ACGACATGAAGAGCCTGCAC 60.672 55.000 0.00 0.00 0.00 4.57
3378 3855 4.263068 GGAAATCCGATGTGGTATCCTGAT 60.263 45.833 0.00 0.00 39.52 2.90
3379 3856 3.969287 ATCCGATGTGGTATCCTGATG 57.031 47.619 0.00 0.00 39.52 3.07
3514 4041 4.328169 GCTCGCCGTGTTTTTACTAGTTAT 59.672 41.667 0.00 0.00 0.00 1.89
3554 4081 6.610741 ACTGTTCTCTTTCATTTCACTGTC 57.389 37.500 0.00 0.00 0.00 3.51
3582 4109 2.358737 GACAGCCAAGTCCCACCG 60.359 66.667 0.00 0.00 32.36 4.94
3615 4142 7.365741 GGTATGCCATTTCTATTGTGATCAAG 58.634 38.462 0.00 0.00 34.22 3.02
3616 4143 5.840243 TGCCATTTCTATTGTGATCAAGG 57.160 39.130 0.00 0.00 36.97 3.61
3617 4144 5.263599 TGCCATTTCTATTGTGATCAAGGT 58.736 37.500 0.00 0.00 36.97 3.50
3618 4145 5.716228 TGCCATTTCTATTGTGATCAAGGTT 59.284 36.000 0.00 0.00 36.97 3.50
3620 4147 7.099120 GCCATTTCTATTGTGATCAAGGTTTT 58.901 34.615 0.00 0.00 36.97 2.43
3621 4148 7.063780 GCCATTTCTATTGTGATCAAGGTTTTG 59.936 37.037 0.00 0.00 36.97 2.44
3622 4149 7.546667 CCATTTCTATTGTGATCAAGGTTTTGG 59.453 37.037 0.00 0.00 36.97 3.28
3623 4150 7.595819 TTTCTATTGTGATCAAGGTTTTGGT 57.404 32.000 0.00 0.00 36.97 3.67
3625 4152 8.698973 TTCTATTGTGATCAAGGTTTTGGTTA 57.301 30.769 0.00 0.00 36.97 2.85
3626 4153 8.106247 TCTATTGTGATCAAGGTTTTGGTTAC 57.894 34.615 0.00 0.00 35.20 2.50
3627 4154 5.523438 TTGTGATCAAGGTTTTGGTTACC 57.477 39.130 0.00 0.00 34.07 2.85
3628 4155 3.566322 TGTGATCAAGGTTTTGGTTACCG 59.434 43.478 0.00 0.00 40.69 4.02
3629 4156 3.816523 GTGATCAAGGTTTTGGTTACCGA 59.183 43.478 0.00 0.00 40.69 4.69
3631 4158 5.048294 GTGATCAAGGTTTTGGTTACCGAAT 60.048 40.000 4.72 0.00 40.69 3.34
3632 4159 4.839668 TCAAGGTTTTGGTTACCGAATG 57.160 40.909 4.72 0.85 40.69 2.67
3633 4160 4.462133 TCAAGGTTTTGGTTACCGAATGA 58.538 39.130 4.72 3.29 40.69 2.57
3635 4162 3.418047 AGGTTTTGGTTACCGAATGAGG 58.582 45.455 4.72 0.00 40.69 3.86
3636 4163 2.094906 GGTTTTGGTTACCGAATGAGGC 60.095 50.000 4.72 0.00 33.69 4.70
3637 4164 2.554893 GTTTTGGTTACCGAATGAGGCA 59.445 45.455 4.72 0.00 33.69 4.75
3638 4165 2.799126 TTGGTTACCGAATGAGGCAT 57.201 45.000 0.00 0.00 33.69 4.40
3641 4168 3.426615 TGGTTACCGAATGAGGCATTTT 58.573 40.909 0.00 0.00 33.90 1.82
3642 4169 3.829601 TGGTTACCGAATGAGGCATTTTT 59.170 39.130 0.00 0.00 33.90 1.94
3643 4170 5.010933 TGGTTACCGAATGAGGCATTTTTA 58.989 37.500 0.00 0.00 33.90 1.52
3646 4173 2.422127 ACCGAATGAGGCATTTTTACCG 59.578 45.455 0.00 0.00 33.90 4.02
3647 4174 2.680841 CCGAATGAGGCATTTTTACCGA 59.319 45.455 0.00 0.00 33.90 4.69
3648 4175 3.242739 CCGAATGAGGCATTTTTACCGAG 60.243 47.826 0.00 0.00 33.90 4.63
3649 4176 3.242739 CGAATGAGGCATTTTTACCGAGG 60.243 47.826 0.00 0.00 33.90 4.63
3650 4177 2.122783 TGAGGCATTTTTACCGAGGG 57.877 50.000 0.00 0.00 0.00 4.30
3651 4178 1.340600 TGAGGCATTTTTACCGAGGGG 60.341 52.381 0.00 0.00 40.11 4.79
3652 4179 0.033503 AGGCATTTTTACCGAGGGGG 60.034 55.000 0.00 0.00 43.62 5.40
3653 4180 0.033894 GGCATTTTTACCGAGGGGGA 60.034 55.000 0.00 0.00 39.97 4.81
3654 4181 1.100510 GCATTTTTACCGAGGGGGAC 58.899 55.000 0.00 0.00 39.97 4.46
3655 4182 1.340697 GCATTTTTACCGAGGGGGACT 60.341 52.381 0.00 0.00 39.97 3.85
3656 4183 2.365582 CATTTTTACCGAGGGGGACTG 58.634 52.381 0.00 0.00 39.97 3.51
3657 4184 0.694196 TTTTTACCGAGGGGGACTGG 59.306 55.000 0.00 0.00 39.97 4.00
3658 4185 0.178897 TTTTACCGAGGGGGACTGGA 60.179 55.000 0.00 0.00 39.97 3.86
3659 4186 0.178897 TTTACCGAGGGGGACTGGAA 60.179 55.000 0.00 0.00 39.97 3.53
3660 4187 0.178897 TTACCGAGGGGGACTGGAAA 60.179 55.000 0.00 0.00 39.97 3.13
3661 4188 0.178897 TACCGAGGGGGACTGGAAAA 60.179 55.000 0.00 0.00 39.97 2.29
3662 4189 1.002502 CCGAGGGGGACTGGAAAAC 60.003 63.158 0.00 0.00 38.47 2.43
3663 4190 1.375523 CGAGGGGGACTGGAAAACG 60.376 63.158 0.00 0.00 0.00 3.60
3664 4191 1.674651 GAGGGGGACTGGAAAACGC 60.675 63.158 0.00 0.00 0.00 4.84
3665 4192 3.053896 GGGGGACTGGAAAACGCG 61.054 66.667 3.53 3.53 0.00 6.01
3666 4193 3.053896 GGGGACTGGAAAACGCGG 61.054 66.667 12.47 0.00 0.00 6.46
3667 4194 2.281276 GGGACTGGAAAACGCGGT 60.281 61.111 12.47 0.00 0.00 5.68
3668 4195 1.895231 GGGACTGGAAAACGCGGTT 60.895 57.895 12.47 7.61 0.00 4.44
3669 4196 0.603439 GGGACTGGAAAACGCGGTTA 60.603 55.000 11.16 0.00 0.00 2.85
3670 4197 0.514255 GGACTGGAAAACGCGGTTAC 59.486 55.000 11.16 7.26 0.00 2.50
3671 4198 0.514255 GACTGGAAAACGCGGTTACC 59.486 55.000 11.16 8.83 0.00 2.85
3672 4199 0.179051 ACTGGAAAACGCGGTTACCA 60.179 50.000 11.16 13.26 33.67 3.25
3673 4200 0.236449 CTGGAAAACGCGGTTACCAC 59.764 55.000 11.16 0.97 32.29 4.16
3674 4201 1.204813 GGAAAACGCGGTTACCACG 59.795 57.895 11.16 10.46 35.00 4.94
3675 4202 1.204813 GAAAACGCGGTTACCACGG 59.795 57.895 11.16 0.00 32.93 4.94
3676 4203 1.498043 GAAAACGCGGTTACCACGGT 61.498 55.000 11.16 6.65 32.93 4.83
3677 4204 1.094650 AAAACGCGGTTACCACGGTT 61.095 50.000 11.16 13.07 40.87 4.44
3678 4205 0.249657 AAACGCGGTTACCACGGTTA 60.250 50.000 13.70 0.00 37.21 2.85
3679 4206 0.943835 AACGCGGTTACCACGGTTAC 60.944 55.000 16.33 0.00 32.93 2.50
3680 4207 2.094066 CGCGGTTACCACGGTTACC 61.094 63.158 13.32 13.32 42.42 2.85
3696 4223 5.861222 GGTTACCGAGAAATACCGAAAAA 57.139 39.130 0.00 0.00 0.00 1.94
3697 4224 6.426980 GGTTACCGAGAAATACCGAAAAAT 57.573 37.500 0.00 0.00 0.00 1.82
3698 4225 7.538303 GGTTACCGAGAAATACCGAAAAATA 57.462 36.000 0.00 0.00 0.00 1.40
3699 4226 7.401860 GGTTACCGAGAAATACCGAAAAATAC 58.598 38.462 0.00 0.00 0.00 1.89
3700 4227 7.401860 GTTACCGAGAAATACCGAAAAATACC 58.598 38.462 0.00 0.00 0.00 2.73
3701 4228 4.567959 ACCGAGAAATACCGAAAAATACCG 59.432 41.667 0.00 0.00 0.00 4.02
3702 4229 4.805192 CCGAGAAATACCGAAAAATACCGA 59.195 41.667 0.00 0.00 0.00 4.69
3703 4230 5.051240 CCGAGAAATACCGAAAAATACCGAG 60.051 44.000 0.00 0.00 0.00 4.63
3704 4231 5.745294 CGAGAAATACCGAAAAATACCGAGA 59.255 40.000 0.00 0.00 0.00 4.04
3705 4232 6.254157 CGAGAAATACCGAAAAATACCGAGAA 59.746 38.462 0.00 0.00 0.00 2.87
3706 4233 7.042925 CGAGAAATACCGAAAAATACCGAGAAT 60.043 37.037 0.00 0.00 0.00 2.40
3707 4234 9.252962 GAGAAATACCGAAAAATACCGAGAATA 57.747 33.333 0.00 0.00 0.00 1.75
3708 4235 9.774413 AGAAATACCGAAAAATACCGAGAATAT 57.226 29.630 0.00 0.00 0.00 1.28
3712 4239 6.940714 ACCGAAAAATACCGAGAATATTTCG 58.059 36.000 9.91 9.91 44.11 3.46
3713 4240 6.757947 ACCGAAAAATACCGAGAATATTTCGA 59.242 34.615 16.45 0.00 46.11 3.71
3714 4241 7.278424 ACCGAAAAATACCGAGAATATTTCGAA 59.722 33.333 16.45 0.00 46.11 3.71
3715 4242 7.581600 CCGAAAAATACCGAGAATATTTCGAAC 59.418 37.037 16.45 0.00 46.11 3.95
3716 4243 7.314944 CGAAAAATACCGAGAATATTTCGAACG 59.685 37.037 16.51 0.00 46.11 3.95
3717 4244 7.760131 AAAATACCGAGAATATTTCGAACGA 57.240 32.000 16.51 0.00 40.36 3.85
3718 4245 7.760131 AAATACCGAGAATATTTCGAACGAA 57.240 32.000 16.51 5.53 40.36 3.85
3719 4246 7.941795 AATACCGAGAATATTTCGAACGAAT 57.058 32.000 16.51 0.00 40.36 3.34
3720 4247 7.941795 ATACCGAGAATATTTCGAACGAATT 57.058 32.000 16.51 9.48 40.36 2.17
3721 4248 6.657836 ACCGAGAATATTTCGAACGAATTT 57.342 33.333 16.51 5.50 40.36 1.82
3722 4249 7.068692 ACCGAGAATATTTCGAACGAATTTT 57.931 32.000 16.51 5.19 40.36 1.82
3723 4250 8.188531 ACCGAGAATATTTCGAACGAATTTTA 57.811 30.769 16.51 4.41 40.36 1.52
3724 4251 8.823818 ACCGAGAATATTTCGAACGAATTTTAT 58.176 29.630 16.51 4.20 40.36 1.40
3770 4297 7.924103 AAGTTAATGAACGAACATTTGAACC 57.076 32.000 14.28 3.13 40.76 3.62
3771 4298 7.033530 AGTTAATGAACGAACATTTGAACCA 57.966 32.000 14.28 0.00 40.76 3.67
3772 4299 7.484975 AGTTAATGAACGAACATTTGAACCAA 58.515 30.769 14.28 3.02 40.76 3.67
3773 4300 7.976734 AGTTAATGAACGAACATTTGAACCAAA 59.023 29.630 14.28 0.00 40.76 3.28
3774 4301 6.826893 AATGAACGAACATTTGAACCAAAG 57.173 33.333 0.00 0.00 36.76 2.77
3775 4302 5.568685 TGAACGAACATTTGAACCAAAGA 57.431 34.783 0.00 0.00 36.76 2.52
3776 4303 5.336744 TGAACGAACATTTGAACCAAAGAC 58.663 37.500 0.00 0.00 36.76 3.01
3777 4304 4.301637 ACGAACATTTGAACCAAAGACC 57.698 40.909 0.00 0.00 36.76 3.85
3778 4305 3.951680 ACGAACATTTGAACCAAAGACCT 59.048 39.130 0.00 0.00 36.76 3.85
3779 4306 4.036380 ACGAACATTTGAACCAAAGACCTC 59.964 41.667 0.00 0.00 36.76 3.85
3780 4307 4.275936 CGAACATTTGAACCAAAGACCTCT 59.724 41.667 0.00 0.00 36.76 3.69
3781 4308 5.560953 CGAACATTTGAACCAAAGACCTCTC 60.561 44.000 0.00 0.00 36.76 3.20
3782 4309 4.792068 ACATTTGAACCAAAGACCTCTCA 58.208 39.130 0.00 0.00 36.76 3.27
3783 4310 5.200483 ACATTTGAACCAAAGACCTCTCAA 58.800 37.500 0.00 0.00 36.76 3.02
3784 4311 5.656416 ACATTTGAACCAAAGACCTCTCAAA 59.344 36.000 0.00 0.00 36.76 2.69
3785 4312 6.154363 ACATTTGAACCAAAGACCTCTCAAAA 59.846 34.615 0.00 0.00 36.76 2.44
3786 4313 5.576447 TTGAACCAAAGACCTCTCAAAAC 57.424 39.130 0.00 0.00 0.00 2.43
3787 4314 4.594970 TGAACCAAAGACCTCTCAAAACA 58.405 39.130 0.00 0.00 0.00 2.83
3788 4315 4.398044 TGAACCAAAGACCTCTCAAAACAC 59.602 41.667 0.00 0.00 0.00 3.32
3789 4316 2.943033 ACCAAAGACCTCTCAAAACACG 59.057 45.455 0.00 0.00 0.00 4.49
3790 4317 3.202906 CCAAAGACCTCTCAAAACACGA 58.797 45.455 0.00 0.00 0.00 4.35
3791 4318 3.625764 CCAAAGACCTCTCAAAACACGAA 59.374 43.478 0.00 0.00 0.00 3.85
3792 4319 4.495844 CCAAAGACCTCTCAAAACACGAAC 60.496 45.833 0.00 0.00 0.00 3.95
3793 4320 3.821421 AGACCTCTCAAAACACGAACT 57.179 42.857 0.00 0.00 0.00 3.01
3794 4321 4.931661 AGACCTCTCAAAACACGAACTA 57.068 40.909 0.00 0.00 0.00 2.24
3795 4322 4.872664 AGACCTCTCAAAACACGAACTAG 58.127 43.478 0.00 0.00 0.00 2.57
3796 4323 3.988517 GACCTCTCAAAACACGAACTAGG 59.011 47.826 0.00 0.00 0.00 3.02
3797 4324 3.387050 ACCTCTCAAAACACGAACTAGGT 59.613 43.478 0.00 0.00 0.00 3.08
3798 4325 4.141779 ACCTCTCAAAACACGAACTAGGTT 60.142 41.667 0.00 0.00 30.79 3.50
3799 4326 4.448060 CCTCTCAAAACACGAACTAGGTTC 59.552 45.833 0.00 0.82 38.97 3.62
3800 4327 4.374399 TCTCAAAACACGAACTAGGTTCC 58.626 43.478 0.00 0.00 39.14 3.62
3801 4328 3.125316 TCAAAACACGAACTAGGTTCCG 58.875 45.455 0.00 0.00 39.14 4.30
3802 4329 3.125316 CAAAACACGAACTAGGTTCCGA 58.875 45.455 0.00 0.00 39.14 4.55
3803 4330 2.428888 AACACGAACTAGGTTCCGAC 57.571 50.000 0.00 0.00 39.14 4.79
3804 4331 0.600057 ACACGAACTAGGTTCCGACC 59.400 55.000 0.00 0.00 46.92 4.79
3812 4339 3.351450 GGTTCCGACCAACAAGCC 58.649 61.111 0.00 0.00 45.77 4.35
3813 4340 1.527380 GGTTCCGACCAACAAGCCA 60.527 57.895 0.00 0.00 45.77 4.75
3814 4341 1.104577 GGTTCCGACCAACAAGCCAA 61.105 55.000 0.00 0.00 45.77 4.52
3815 4342 0.741915 GTTCCGACCAACAAGCCAAA 59.258 50.000 0.00 0.00 0.00 3.28
3816 4343 1.135333 GTTCCGACCAACAAGCCAAAA 59.865 47.619 0.00 0.00 0.00 2.44
3817 4344 0.741915 TCCGACCAACAAGCCAAAAC 59.258 50.000 0.00 0.00 0.00 2.43
3818 4345 0.249280 CCGACCAACAAGCCAAAACC 60.249 55.000 0.00 0.00 0.00 3.27
3819 4346 0.457851 CGACCAACAAGCCAAAACCA 59.542 50.000 0.00 0.00 0.00 3.67
3820 4347 1.134965 CGACCAACAAGCCAAAACCAA 60.135 47.619 0.00 0.00 0.00 3.67
3821 4348 2.276201 GACCAACAAGCCAAAACCAAC 58.724 47.619 0.00 0.00 0.00 3.77
3822 4349 1.905894 ACCAACAAGCCAAAACCAACT 59.094 42.857 0.00 0.00 0.00 3.16
3823 4350 2.093711 ACCAACAAGCCAAAACCAACTC 60.094 45.455 0.00 0.00 0.00 3.01
3824 4351 2.168313 CCAACAAGCCAAAACCAACTCT 59.832 45.455 0.00 0.00 0.00 3.24
3825 4352 3.447742 CAACAAGCCAAAACCAACTCTC 58.552 45.455 0.00 0.00 0.00 3.20
3826 4353 2.733956 ACAAGCCAAAACCAACTCTCA 58.266 42.857 0.00 0.00 0.00 3.27
3827 4354 3.299503 ACAAGCCAAAACCAACTCTCAT 58.700 40.909 0.00 0.00 0.00 2.90
3828 4355 3.068590 ACAAGCCAAAACCAACTCTCATG 59.931 43.478 0.00 0.00 0.00 3.07
3829 4356 3.228188 AGCCAAAACCAACTCTCATGA 57.772 42.857 0.00 0.00 0.00 3.07
3830 4357 3.771216 AGCCAAAACCAACTCTCATGAT 58.229 40.909 0.00 0.00 0.00 2.45
3831 4358 4.922206 AGCCAAAACCAACTCTCATGATA 58.078 39.130 0.00 0.00 0.00 2.15
3832 4359 5.513233 AGCCAAAACCAACTCTCATGATAT 58.487 37.500 0.00 0.00 0.00 1.63
3833 4360 5.954150 AGCCAAAACCAACTCTCATGATATT 59.046 36.000 0.00 0.00 0.00 1.28
3834 4361 7.118723 AGCCAAAACCAACTCTCATGATATTA 58.881 34.615 0.00 0.00 0.00 0.98
3835 4362 7.615365 AGCCAAAACCAACTCTCATGATATTAA 59.385 33.333 0.00 0.00 0.00 1.40
3836 4363 8.416329 GCCAAAACCAACTCTCATGATATTAAT 58.584 33.333 0.00 0.00 0.00 1.40
3921 4448 4.657436 TTTTTGCTTGGTACGTGGATTT 57.343 36.364 0.00 0.00 0.00 2.17
3922 4449 5.769484 TTTTTGCTTGGTACGTGGATTTA 57.231 34.783 0.00 0.00 0.00 1.40
3923 4450 4.752661 TTTGCTTGGTACGTGGATTTAC 57.247 40.909 0.00 0.00 0.00 2.01
3924 4451 2.702261 TGCTTGGTACGTGGATTTACC 58.298 47.619 0.00 0.00 38.65 2.85
3925 4452 1.662122 GCTTGGTACGTGGATTTACCG 59.338 52.381 0.00 0.00 40.75 4.02
3926 4453 2.674747 GCTTGGTACGTGGATTTACCGA 60.675 50.000 0.00 0.00 40.75 4.69
3927 4454 2.945447 TGGTACGTGGATTTACCGAG 57.055 50.000 0.00 0.00 40.75 4.63
3928 4455 1.477700 TGGTACGTGGATTTACCGAGG 59.522 52.381 0.00 0.00 40.75 4.63
3929 4456 1.202452 GGTACGTGGATTTACCGAGGG 60.202 57.143 0.00 0.00 42.61 4.30
3930 4457 1.113788 TACGTGGATTTACCGAGGGG 58.886 55.000 0.00 0.00 42.61 4.79
3931 4458 1.523032 CGTGGATTTACCGAGGGGC 60.523 63.158 0.00 0.00 42.61 5.80
3932 4459 1.605453 GTGGATTTACCGAGGGGCA 59.395 57.895 0.00 0.00 42.61 5.36
3933 4460 0.746923 GTGGATTTACCGAGGGGCAC 60.747 60.000 0.00 0.00 42.61 5.01
3934 4461 1.523032 GGATTTACCGAGGGGCACG 60.523 63.158 0.00 0.00 36.48 5.34
3941 4468 4.120085 CGAGGGGCACGGAAATAC 57.880 61.111 0.00 0.00 0.00 1.89
3942 4469 1.881252 CGAGGGGCACGGAAATACG 60.881 63.158 0.00 0.00 40.31 3.06
3943 4470 2.124860 AGGGGCACGGAAATACGC 60.125 61.111 0.00 0.00 37.37 4.42
3944 4471 3.569690 GGGGCACGGAAATACGCG 61.570 66.667 3.53 3.53 37.37 6.01
3945 4472 3.569690 GGGCACGGAAATACGCGG 61.570 66.667 12.47 0.00 37.37 6.46
3946 4473 2.816520 GGCACGGAAATACGCGGT 60.817 61.111 12.47 0.00 37.37 5.68
3947 4474 1.519013 GGCACGGAAATACGCGGTA 60.519 57.895 12.47 0.25 37.37 4.02
3948 4475 1.083242 GGCACGGAAATACGCGGTAA 61.083 55.000 12.47 0.00 37.37 2.85
3949 4476 0.025384 GCACGGAAATACGCGGTAAC 59.975 55.000 12.47 0.00 37.37 2.50
3950 4477 0.646895 CACGGAAATACGCGGTAACC 59.353 55.000 12.47 6.30 37.37 2.85
3951 4478 0.246086 ACGGAAATACGCGGTAACCA 59.754 50.000 12.47 0.00 37.37 3.67
3952 4479 1.134729 ACGGAAATACGCGGTAACCAT 60.135 47.619 12.47 0.00 37.37 3.55
3953 4480 1.259507 CGGAAATACGCGGTAACCATG 59.740 52.381 12.47 0.00 0.00 3.66
3954 4481 1.600485 GGAAATACGCGGTAACCATGG 59.400 52.381 11.19 11.19 0.00 3.66
3955 4482 2.282407 GAAATACGCGGTAACCATGGT 58.718 47.619 13.00 13.00 0.00 3.55
3956 4483 3.456280 GAAATACGCGGTAACCATGGTA 58.544 45.455 20.12 3.74 0.00 3.25
3957 4484 3.540314 AATACGCGGTAACCATGGTAA 57.460 42.857 20.12 0.00 0.00 2.85
3958 4485 3.540314 ATACGCGGTAACCATGGTAAA 57.460 42.857 20.12 6.80 0.00 2.01
3959 4486 2.406596 ACGCGGTAACCATGGTAAAT 57.593 45.000 20.12 5.12 0.00 1.40
3960 4487 2.282407 ACGCGGTAACCATGGTAAATC 58.718 47.619 20.12 9.13 0.00 2.17
3961 4488 2.093341 ACGCGGTAACCATGGTAAATCT 60.093 45.455 20.12 4.24 0.00 2.40
3962 4489 2.542595 CGCGGTAACCATGGTAAATCTC 59.457 50.000 20.12 4.04 0.00 2.75
3963 4490 2.542595 GCGGTAACCATGGTAAATCTCG 59.457 50.000 20.12 16.40 0.00 4.04
3964 4491 3.738899 GCGGTAACCATGGTAAATCTCGA 60.739 47.826 20.12 0.00 0.00 4.04
3965 4492 4.435425 CGGTAACCATGGTAAATCTCGAA 58.565 43.478 20.12 0.00 0.00 3.71
3966 4493 4.871557 CGGTAACCATGGTAAATCTCGAAA 59.128 41.667 20.12 0.00 0.00 3.46
3967 4494 5.526111 CGGTAACCATGGTAAATCTCGAAAT 59.474 40.000 20.12 0.00 0.00 2.17
3968 4495 6.037830 CGGTAACCATGGTAAATCTCGAAATT 59.962 38.462 20.12 0.00 0.00 1.82
3969 4496 7.414762 CGGTAACCATGGTAAATCTCGAAATTT 60.415 37.037 20.12 1.76 33.54 1.82
3970 4497 7.913821 GGTAACCATGGTAAATCTCGAAATTTC 59.086 37.037 20.12 8.20 31.50 2.17
3984 4511 4.486574 GAAATTTCGACCGGTAACCAAA 57.513 40.909 7.34 4.53 0.00 3.28
3985 4512 4.857799 GAAATTTCGACCGGTAACCAAAA 58.142 39.130 7.34 4.39 0.00 2.44
3986 4513 3.902261 ATTTCGACCGGTAACCAAAAC 57.098 42.857 7.34 0.00 0.00 2.43
3987 4514 1.592064 TTCGACCGGTAACCAAAACC 58.408 50.000 7.34 0.00 0.00 3.27
3988 4515 0.758123 TCGACCGGTAACCAAAACCT 59.242 50.000 7.34 0.00 34.66 3.50
3989 4516 1.140652 TCGACCGGTAACCAAAACCTT 59.859 47.619 7.34 0.00 34.66 3.50
3990 4517 1.264826 CGACCGGTAACCAAAACCTTG 59.735 52.381 7.34 0.00 34.66 3.61
3991 4518 2.574450 GACCGGTAACCAAAACCTTGA 58.426 47.619 7.34 0.00 34.14 3.02
3992 4519 3.151554 GACCGGTAACCAAAACCTTGAT 58.848 45.455 7.34 0.00 34.14 2.57
3993 4520 3.568443 ACCGGTAACCAAAACCTTGATT 58.432 40.909 4.49 0.00 34.14 2.57
3994 4521 3.319689 ACCGGTAACCAAAACCTTGATTG 59.680 43.478 4.49 0.00 34.14 2.67
3995 4522 3.319689 CCGGTAACCAAAACCTTGATTGT 59.680 43.478 0.00 0.00 34.14 2.71
3996 4523 4.295051 CGGTAACCAAAACCTTGATTGTG 58.705 43.478 0.00 0.00 34.14 3.33
3997 4524 4.036971 CGGTAACCAAAACCTTGATTGTGA 59.963 41.667 0.00 0.00 34.14 3.58
3998 4525 5.278758 CGGTAACCAAAACCTTGATTGTGAT 60.279 40.000 0.00 0.00 34.14 3.06
3999 4526 6.156519 GGTAACCAAAACCTTGATTGTGATC 58.843 40.000 0.00 0.00 34.14 2.92
4000 4527 5.867903 AACCAAAACCTTGATTGTGATCA 57.132 34.783 0.00 0.00 40.46 2.92
4021 4548 9.317936 TGATCAAATCACTTTACAGCTATACTG 57.682 33.333 0.00 0.00 42.66 2.74
4060 4587 3.949842 AAGATTTCCTCTTTGCTTGGC 57.050 42.857 0.00 0.00 41.60 4.52
4061 4588 3.166560 AGATTTCCTCTTTGCTTGGCT 57.833 42.857 0.00 0.00 0.00 4.75
4062 4589 2.824341 AGATTTCCTCTTTGCTTGGCTG 59.176 45.455 0.00 0.00 0.00 4.85
4063 4590 2.363306 TTTCCTCTTTGCTTGGCTGA 57.637 45.000 0.00 0.00 0.00 4.26
4064 4591 2.363306 TTCCTCTTTGCTTGGCTGAA 57.637 45.000 0.00 0.00 0.00 3.02
4065 4592 2.592102 TCCTCTTTGCTTGGCTGAAT 57.408 45.000 0.00 0.00 0.00 2.57
4066 4593 2.880443 TCCTCTTTGCTTGGCTGAATT 58.120 42.857 0.00 0.00 0.00 2.17
4067 4594 2.559668 TCCTCTTTGCTTGGCTGAATTG 59.440 45.455 0.00 0.00 0.00 2.32
4068 4595 2.559668 CCTCTTTGCTTGGCTGAATTGA 59.440 45.455 0.00 0.00 0.00 2.57
4069 4596 3.194968 CCTCTTTGCTTGGCTGAATTGAT 59.805 43.478 0.00 0.00 0.00 2.57
4070 4597 4.322499 CCTCTTTGCTTGGCTGAATTGATT 60.322 41.667 0.00 0.00 0.00 2.57
4071 4598 4.813027 TCTTTGCTTGGCTGAATTGATTC 58.187 39.130 0.00 0.00 37.31 2.52
4072 4599 3.598019 TTGCTTGGCTGAATTGATTCC 57.402 42.857 1.56 0.00 35.97 3.01
4073 4600 2.811410 TGCTTGGCTGAATTGATTCCT 58.189 42.857 1.56 0.00 35.97 3.36
4074 4601 2.494471 TGCTTGGCTGAATTGATTCCTG 59.506 45.455 1.56 0.00 35.97 3.86
4075 4602 2.756760 GCTTGGCTGAATTGATTCCTGA 59.243 45.455 1.56 0.00 35.97 3.86
4076 4603 3.194116 GCTTGGCTGAATTGATTCCTGAA 59.806 43.478 1.56 0.00 35.97 3.02
4077 4604 4.677250 GCTTGGCTGAATTGATTCCTGAAG 60.677 45.833 1.56 0.00 35.97 3.02
4078 4605 4.038271 TGGCTGAATTGATTCCTGAAGT 57.962 40.909 1.56 0.00 35.97 3.01
4079 4606 4.012374 TGGCTGAATTGATTCCTGAAGTC 58.988 43.478 1.56 0.00 35.97 3.01
4080 4607 3.379688 GGCTGAATTGATTCCTGAAGTCC 59.620 47.826 1.56 0.00 35.97 3.85
4081 4608 3.064545 GCTGAATTGATTCCTGAAGTCCG 59.935 47.826 1.56 0.00 35.97 4.79
4082 4609 3.009723 TGAATTGATTCCTGAAGTCCGC 58.990 45.455 1.56 0.00 35.97 5.54
4083 4610 3.274288 GAATTGATTCCTGAAGTCCGCT 58.726 45.455 0.00 0.00 0.00 5.52
4084 4611 2.386661 TTGATTCCTGAAGTCCGCTC 57.613 50.000 0.00 0.00 0.00 5.03
4085 4612 1.266178 TGATTCCTGAAGTCCGCTCA 58.734 50.000 0.00 0.00 0.00 4.26
4086 4613 1.623311 TGATTCCTGAAGTCCGCTCAA 59.377 47.619 0.00 0.00 0.00 3.02
4087 4614 2.038426 TGATTCCTGAAGTCCGCTCAAA 59.962 45.455 0.00 0.00 0.00 2.69
4088 4615 1.878953 TTCCTGAAGTCCGCTCAAAC 58.121 50.000 0.00 0.00 0.00 2.93
4089 4616 0.034896 TCCTGAAGTCCGCTCAAACC 59.965 55.000 0.00 0.00 0.00 3.27
4090 4617 0.955919 CCTGAAGTCCGCTCAAACCC 60.956 60.000 0.00 0.00 0.00 4.11
4091 4618 0.035458 CTGAAGTCCGCTCAAACCCT 59.965 55.000 0.00 0.00 0.00 4.34
4092 4619 1.275291 CTGAAGTCCGCTCAAACCCTA 59.725 52.381 0.00 0.00 0.00 3.53
4093 4620 1.275291 TGAAGTCCGCTCAAACCCTAG 59.725 52.381 0.00 0.00 0.00 3.02
4094 4621 0.036294 AAGTCCGCTCAAACCCTAGC 60.036 55.000 0.00 0.00 35.33 3.42
4095 4622 0.905337 AGTCCGCTCAAACCCTAGCT 60.905 55.000 0.00 0.00 36.56 3.32
4096 4623 0.036294 GTCCGCTCAAACCCTAGCTT 60.036 55.000 0.00 0.00 36.56 3.74
4097 4624 0.249398 TCCGCTCAAACCCTAGCTTC 59.751 55.000 0.00 0.00 36.56 3.86
4098 4625 0.250513 CCGCTCAAACCCTAGCTTCT 59.749 55.000 0.00 0.00 36.56 2.85
4099 4626 1.480954 CCGCTCAAACCCTAGCTTCTA 59.519 52.381 0.00 0.00 36.56 2.10
4100 4627 2.093658 CCGCTCAAACCCTAGCTTCTAA 60.094 50.000 0.00 0.00 36.56 2.10
4101 4628 3.596214 CGCTCAAACCCTAGCTTCTAAA 58.404 45.455 0.00 0.00 36.56 1.85
4102 4629 4.192317 CGCTCAAACCCTAGCTTCTAAAT 58.808 43.478 0.00 0.00 36.56 1.40
4103 4630 4.271291 CGCTCAAACCCTAGCTTCTAAATC 59.729 45.833 0.00 0.00 36.56 2.17
4104 4631 4.271291 GCTCAAACCCTAGCTTCTAAATCG 59.729 45.833 0.00 0.00 35.80 3.34
4105 4632 5.661458 CTCAAACCCTAGCTTCTAAATCGA 58.339 41.667 0.00 0.00 0.00 3.59
4106 4633 6.235231 TCAAACCCTAGCTTCTAAATCGAT 57.765 37.500 0.00 0.00 0.00 3.59
4107 4634 6.281405 TCAAACCCTAGCTTCTAAATCGATC 58.719 40.000 0.00 0.00 0.00 3.69
4108 4635 4.875561 ACCCTAGCTTCTAAATCGATCC 57.124 45.455 0.00 0.00 0.00 3.36
4109 4636 3.579151 ACCCTAGCTTCTAAATCGATCCC 59.421 47.826 0.00 0.00 0.00 3.85
4160 4687 3.561310 ACATAACATGGATAAGCACTGCG 59.439 43.478 0.00 0.00 33.60 5.18
4176 4703 4.484236 CACTGCGGCTATTTTTGATTTCA 58.516 39.130 0.00 0.00 0.00 2.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 2.453521 GTGGTTTTCCCTGGATTACCC 58.546 52.381 12.24 0.00 39.73 3.69
3 4 2.453521 GGTGGTTTTCCCTGGATTACC 58.546 52.381 0.00 9.26 39.73 2.85
4 5 2.089201 CGGTGGTTTTCCCTGGATTAC 58.911 52.381 0.00 0.00 39.73 1.89
6 7 0.898326 GCGGTGGTTTTCCCTGGATT 60.898 55.000 0.00 0.00 39.73 3.01
7 8 1.304134 GCGGTGGTTTTCCCTGGAT 60.304 57.895 0.00 0.00 39.73 3.41
8 9 2.114411 GCGGTGGTTTTCCCTGGA 59.886 61.111 0.00 0.00 39.73 3.86
9 10 3.361977 CGCGGTGGTTTTCCCTGG 61.362 66.667 0.00 0.00 39.73 4.45
10 11 2.593436 ACGCGGTGGTTTTCCCTG 60.593 61.111 12.47 0.00 39.73 4.45
14 15 1.278637 CAGTGACGCGGTGGTTTTC 59.721 57.895 12.47 0.00 0.00 2.29
28 29 6.580788 AGAGATCTCAATAACCATGACAGTG 58.419 40.000 24.39 0.00 0.00 3.66
31 32 7.186570 TCAAGAGATCTCAATAACCATGACA 57.813 36.000 24.39 0.00 0.00 3.58
32 33 6.705381 CCTCAAGAGATCTCAATAACCATGAC 59.295 42.308 24.39 0.00 0.00 3.06
43 44 1.829849 CTGGTGCCTCAAGAGATCTCA 59.170 52.381 24.39 3.25 0.00 3.27
63 64 1.483004 GAAGACAGTAGAGGGAAGGGC 59.517 57.143 0.00 0.00 0.00 5.19
71 72 0.888619 TGCCGTGGAAGACAGTAGAG 59.111 55.000 0.00 0.00 0.00 2.43
84 85 0.179111 ACGACCTACATGATGCCGTG 60.179 55.000 0.00 0.00 35.46 4.94
85 86 1.395635 TACGACCTACATGATGCCGT 58.604 50.000 0.00 5.02 0.00 5.68
88 89 3.914966 CGATCTTACGACCTACATGATGC 59.085 47.826 0.00 0.00 35.09 3.91
90 91 4.142790 ACCGATCTTACGACCTACATGAT 58.857 43.478 0.00 0.00 35.09 2.45
93 94 4.514441 CACTACCGATCTTACGACCTACAT 59.486 45.833 0.00 0.00 35.09 2.29
94 95 3.873361 CACTACCGATCTTACGACCTACA 59.127 47.826 0.00 0.00 35.09 2.74
99 100 8.285394 TGATTAATACACTACCGATCTTACGAC 58.715 37.037 0.00 0.00 35.09 4.34
133 134 1.603455 CAATGGTTCCACACGCCCT 60.603 57.895 0.00 0.00 0.00 5.19
135 136 0.958382 TAGCAATGGTTCCACACGCC 60.958 55.000 0.00 0.00 0.00 5.68
137 138 1.202177 GCATAGCAATGGTTCCACACG 60.202 52.381 0.00 0.00 33.38 4.49
146 149 2.617308 CCTCTCACAAGCATAGCAATGG 59.383 50.000 0.00 0.00 33.38 3.16
150 153 1.134995 CGTCCTCTCACAAGCATAGCA 60.135 52.381 0.00 0.00 0.00 3.49
151 154 1.565305 CGTCCTCTCACAAGCATAGC 58.435 55.000 0.00 0.00 0.00 2.97
209 212 2.031069 GTCCCTCCAGAAAAAGTTTCGC 60.031 50.000 0.00 0.00 0.00 4.70
211 214 3.250280 GTCGTCCCTCCAGAAAAAGTTTC 59.750 47.826 0.00 0.00 0.00 2.78
212 215 3.211865 GTCGTCCCTCCAGAAAAAGTTT 58.788 45.455 0.00 0.00 0.00 2.66
236 239 6.039616 TGTAACTCCACAAAAAGAAATGTGC 58.960 36.000 0.51 0.00 44.32 4.57
243 246 6.459024 CGGTGAAATGTAACTCCACAAAAAGA 60.459 38.462 0.00 0.00 30.84 2.52
244 247 5.685511 CGGTGAAATGTAACTCCACAAAAAG 59.314 40.000 0.00 0.00 30.84 2.27
283 286 7.119709 ACCAAACCATTATTATAGGGCAAAC 57.880 36.000 0.00 0.00 0.00 2.93
376 405 8.396390 CACATCTTAATTTCACATCTTCTCTGG 58.604 37.037 0.00 0.00 0.00 3.86
386 415 7.509141 ACATGTGTCACATCTTAATTTCACA 57.491 32.000 15.73 0.00 36.53 3.58
427 456 9.787435 AGTCCACAAAAAGTAGTCATGTATAAA 57.213 29.630 0.00 0.00 0.00 1.40
428 457 9.787435 AAGTCCACAAAAAGTAGTCATGTATAA 57.213 29.630 0.00 0.00 0.00 0.98
429 458 9.787435 AAAGTCCACAAAAAGTAGTCATGTATA 57.213 29.630 0.00 0.00 0.00 1.47
430 459 8.567948 CAAAGTCCACAAAAAGTAGTCATGTAT 58.432 33.333 0.00 0.00 0.00 2.29
431 460 7.771361 TCAAAGTCCACAAAAAGTAGTCATGTA 59.229 33.333 0.00 0.00 0.00 2.29
432 461 6.601613 TCAAAGTCCACAAAAAGTAGTCATGT 59.398 34.615 0.00 0.00 0.00 3.21
433 462 7.026631 TCAAAGTCCACAAAAAGTAGTCATG 57.973 36.000 0.00 0.00 0.00 3.07
434 463 7.639113 TTCAAAGTCCACAAAAAGTAGTCAT 57.361 32.000 0.00 0.00 0.00 3.06
435 464 7.455641 TTTCAAAGTCCACAAAAAGTAGTCA 57.544 32.000 0.00 0.00 0.00 3.41
436 465 8.926715 AATTTCAAAGTCCACAAAAAGTAGTC 57.073 30.769 0.00 0.00 0.00 2.59
442 471 9.883142 ACATCTTAATTTCAAAGTCCACAAAAA 57.117 25.926 0.00 0.00 0.00 1.94
443 472 9.311916 CACATCTTAATTTCAAAGTCCACAAAA 57.688 29.630 0.00 0.00 0.00 2.44
444 473 8.690884 TCACATCTTAATTTCAAAGTCCACAAA 58.309 29.630 0.00 0.00 0.00 2.83
445 474 8.134895 GTCACATCTTAATTTCAAAGTCCACAA 58.865 33.333 0.00 0.00 0.00 3.33
446 475 7.284261 TGTCACATCTTAATTTCAAAGTCCACA 59.716 33.333 0.00 0.00 0.00 4.17
447 476 7.591426 GTGTCACATCTTAATTTCAAAGTCCAC 59.409 37.037 0.00 0.00 0.00 4.02
448 477 7.284261 TGTGTCACATCTTAATTTCAAAGTCCA 59.716 33.333 0.18 0.00 0.00 4.02
535 568 2.698797 TCTGGTCCACTTCTTTTCGTCT 59.301 45.455 0.00 0.00 0.00 4.18
537 570 3.553828 TTCTGGTCCACTTCTTTTCGT 57.446 42.857 0.00 0.00 0.00 3.85
577 619 4.361420 GCGAGTAAGACAAGGAAGGTATC 58.639 47.826 0.00 0.00 0.00 2.24
578 620 3.132467 GGCGAGTAAGACAAGGAAGGTAT 59.868 47.826 0.00 0.00 0.00 2.73
579 621 2.494870 GGCGAGTAAGACAAGGAAGGTA 59.505 50.000 0.00 0.00 0.00 3.08
580 622 1.275573 GGCGAGTAAGACAAGGAAGGT 59.724 52.381 0.00 0.00 0.00 3.50
591 633 2.278401 GTACCGGCGGCGAGTAAG 60.278 66.667 34.49 18.04 0.00 2.34
629 677 2.829458 AGGAGAGTACGGCGAGCC 60.829 66.667 16.62 3.59 0.00 4.70
727 775 3.260100 AAGGGCAGAGGGGGTGTG 61.260 66.667 0.00 0.00 0.00 3.82
728 776 2.936032 GAAGGGCAGAGGGGGTGT 60.936 66.667 0.00 0.00 0.00 4.16
802 862 5.001232 TCAATGGAGTTTAACCTCGGAAAG 58.999 41.667 0.00 0.00 31.98 2.62
807 867 2.093783 GCGTCAATGGAGTTTAACCTCG 59.906 50.000 0.00 0.00 31.98 4.63
813 873 2.093921 TCGATGGCGTCAATGGAGTTTA 60.094 45.455 7.60 0.00 38.98 2.01
814 874 1.086696 CGATGGCGTCAATGGAGTTT 58.913 50.000 7.60 0.00 0.00 2.66
815 875 0.249120 TCGATGGCGTCAATGGAGTT 59.751 50.000 7.60 0.00 38.98 3.01
817 877 0.103026 TCTCGATGGCGTCAATGGAG 59.897 55.000 7.60 0.77 38.98 3.86
864 959 3.586470 TGCTTCTTTTACTGGGGACAA 57.414 42.857 0.00 0.00 42.06 3.18
878 978 6.859420 ACACAAAAACAAAAAGTTGCTTCT 57.141 29.167 0.00 0.00 41.19 2.85
892 992 4.427096 CCCCCAAAACAAACACAAAAAC 57.573 40.909 0.00 0.00 0.00 2.43
914 1016 1.853250 AAGTCAAGCCCCCTAGCCAC 61.853 60.000 0.00 0.00 0.00 5.01
915 1017 1.541368 AAGTCAAGCCCCCTAGCCA 60.541 57.895 0.00 0.00 0.00 4.75
917 1019 0.621082 AAGAAGTCAAGCCCCCTAGC 59.379 55.000 0.00 0.00 0.00 3.42
918 1020 2.093235 CAGAAGAAGTCAAGCCCCCTAG 60.093 54.545 0.00 0.00 0.00 3.02
985 1238 4.329462 TCCCCATTGTAAACTGCAAAAC 57.671 40.909 0.00 0.00 0.00 2.43
998 1251 4.523943 TGAAAGTGAGAATGTTCCCCATTG 59.476 41.667 0.00 0.00 43.87 2.82
1011 1264 2.106338 TGTTCCAGGCATGAAAGTGAGA 59.894 45.455 0.00 0.00 0.00 3.27
1017 1270 1.340889 GCAGTTGTTCCAGGCATGAAA 59.659 47.619 0.00 0.00 0.00 2.69
1063 1316 3.483587 TCCTGGGTGGAGTTGCTC 58.516 61.111 0.00 0.00 40.56 4.26
1161 1414 9.185680 TGACAGAATGCTTCACTACTTACTATA 57.814 33.333 0.00 0.00 42.53 1.31
1168 1421 5.474578 TCTTGACAGAATGCTTCACTACT 57.525 39.130 0.00 0.00 42.53 2.57
1189 1442 0.317436 CGGCTGTCGACTATCTGCTC 60.317 60.000 17.92 6.75 42.43 4.26
1199 1452 4.373116 GCTGGAACCGGCTGTCGA 62.373 66.667 16.37 0.00 44.39 4.20
1250 1503 4.360951 TCGTTTCCTGTAATTCCCTTGT 57.639 40.909 0.00 0.00 0.00 3.16
1415 1721 5.229469 CACAAGTAGAAACTAGTAATCCGCG 59.771 44.000 0.00 0.00 33.75 6.46
1418 1724 6.872020 TGCACACAAGTAGAAACTAGTAATCC 59.128 38.462 0.00 0.00 33.75 3.01
1427 1733 5.728351 TGTAGTTGCACACAAGTAGAAAC 57.272 39.130 0.00 0.00 41.31 2.78
1511 1818 0.602638 CGGCACTGGTTCTTACAGCA 60.603 55.000 0.00 0.00 39.55 4.41
1571 1878 9.173939 CATATTTTATTTCCATCGAAACTCAGC 57.826 33.333 0.00 0.00 40.74 4.26
1674 1981 2.301346 CTCTTCAACCAACTTGCCACT 58.699 47.619 0.00 0.00 0.00 4.00
2546 2864 3.991367 ACTTACGTGCAGCTCTAACTTT 58.009 40.909 0.00 0.00 0.00 2.66
3016 3487 2.046023 AGGCGCACATAAGCAGCA 60.046 55.556 10.83 0.00 36.34 4.41
3076 3547 3.005554 CAGGCTCTTCATGTCGTTGAAT 58.994 45.455 0.00 0.00 35.20 2.57
3100 3571 4.558178 TGCATGCTTCAAAACCTGTAATG 58.442 39.130 20.33 0.00 0.00 1.90
3378 3855 1.152376 TGCTGCCCCCAACATTTCA 60.152 52.632 0.00 0.00 0.00 2.69
3379 3856 0.899717 TCTGCTGCCCCCAACATTTC 60.900 55.000 0.00 0.00 0.00 2.17
3514 4041 8.097038 AGAGAACAGTAAATGAAATGCTACAGA 58.903 33.333 0.00 0.00 0.00 3.41
3615 4142 2.094906 GCCTCATTCGGTAACCAAAACC 60.095 50.000 0.00 0.00 0.00 3.27
3616 4143 2.554893 TGCCTCATTCGGTAACCAAAAC 59.445 45.455 0.00 0.00 0.00 2.43
3617 4144 2.865079 TGCCTCATTCGGTAACCAAAA 58.135 42.857 0.00 0.00 0.00 2.44
3618 4145 2.570415 TGCCTCATTCGGTAACCAAA 57.430 45.000 0.00 0.00 0.00 3.28
3620 4147 2.799126 AATGCCTCATTCGGTAACCA 57.201 45.000 0.00 0.00 26.27 3.67
3621 4148 4.450082 AAAAATGCCTCATTCGGTAACC 57.550 40.909 0.00 0.00 32.43 2.85
3622 4149 5.337554 GGTAAAAATGCCTCATTCGGTAAC 58.662 41.667 0.00 0.00 32.43 2.50
3623 4150 4.095185 CGGTAAAAATGCCTCATTCGGTAA 59.905 41.667 0.00 0.00 32.43 2.85
3625 4152 2.422127 CGGTAAAAATGCCTCATTCGGT 59.578 45.455 0.00 0.00 32.43 4.69
3626 4153 2.680841 TCGGTAAAAATGCCTCATTCGG 59.319 45.455 0.00 0.00 32.43 4.30
3627 4154 3.242739 CCTCGGTAAAAATGCCTCATTCG 60.243 47.826 0.00 0.00 32.43 3.34
3628 4155 3.066760 CCCTCGGTAAAAATGCCTCATTC 59.933 47.826 0.00 0.00 32.43 2.67
3629 4156 3.023832 CCCTCGGTAAAAATGCCTCATT 58.976 45.455 0.00 0.00 35.39 2.57
3631 4158 1.340600 CCCCTCGGTAAAAATGCCTCA 60.341 52.381 0.00 0.00 0.00 3.86
3632 4159 1.389555 CCCCTCGGTAAAAATGCCTC 58.610 55.000 0.00 0.00 0.00 4.70
3633 4160 0.033503 CCCCCTCGGTAAAAATGCCT 60.034 55.000 0.00 0.00 0.00 4.75
3635 4162 1.100510 GTCCCCCTCGGTAAAAATGC 58.899 55.000 0.00 0.00 0.00 3.56
3636 4163 2.365582 CAGTCCCCCTCGGTAAAAATG 58.634 52.381 0.00 0.00 0.00 2.32
3637 4164 1.283905 CCAGTCCCCCTCGGTAAAAAT 59.716 52.381 0.00 0.00 0.00 1.82
3638 4165 0.694196 CCAGTCCCCCTCGGTAAAAA 59.306 55.000 0.00 0.00 0.00 1.94
3641 4168 0.178897 TTTCCAGTCCCCCTCGGTAA 60.179 55.000 0.00 0.00 0.00 2.85
3642 4169 0.178897 TTTTCCAGTCCCCCTCGGTA 60.179 55.000 0.00 0.00 0.00 4.02
3643 4170 1.462627 TTTTCCAGTCCCCCTCGGT 60.463 57.895 0.00 0.00 0.00 4.69
3646 4173 1.674651 GCGTTTTCCAGTCCCCCTC 60.675 63.158 0.00 0.00 0.00 4.30
3647 4174 2.434774 GCGTTTTCCAGTCCCCCT 59.565 61.111 0.00 0.00 0.00 4.79
3648 4175 3.053896 CGCGTTTTCCAGTCCCCC 61.054 66.667 0.00 0.00 0.00 5.40
3649 4176 3.053896 CCGCGTTTTCCAGTCCCC 61.054 66.667 4.92 0.00 0.00 4.81
3650 4177 0.603439 TAACCGCGTTTTCCAGTCCC 60.603 55.000 4.92 0.00 0.00 4.46
3651 4178 0.514255 GTAACCGCGTTTTCCAGTCC 59.486 55.000 4.92 0.00 0.00 3.85
3652 4179 0.514255 GGTAACCGCGTTTTCCAGTC 59.486 55.000 7.17 0.00 0.00 3.51
3653 4180 0.179051 TGGTAACCGCGTTTTCCAGT 60.179 50.000 10.62 0.00 30.09 4.00
3654 4181 0.236449 GTGGTAACCGCGTTTTCCAG 59.764 55.000 14.79 0.00 32.52 3.86
3655 4182 2.319219 GTGGTAACCGCGTTTTCCA 58.681 52.632 10.62 10.62 0.00 3.53
3663 4190 3.874873 GGTAACCGTGGTAACCGC 58.125 61.111 0.00 0.00 0.00 5.68
3674 4201 5.861222 TTTTTCGGTATTTCTCGGTAACC 57.139 39.130 0.00 0.00 0.00 2.85
3675 4202 7.401860 GGTATTTTTCGGTATTTCTCGGTAAC 58.598 38.462 0.00 0.00 0.00 2.50
3676 4203 6.255453 CGGTATTTTTCGGTATTTCTCGGTAA 59.745 38.462 0.00 0.00 0.00 2.85
3677 4204 5.748152 CGGTATTTTTCGGTATTTCTCGGTA 59.252 40.000 0.00 0.00 0.00 4.02
3678 4205 4.567959 CGGTATTTTTCGGTATTTCTCGGT 59.432 41.667 0.00 0.00 0.00 4.69
3679 4206 4.805192 TCGGTATTTTTCGGTATTTCTCGG 59.195 41.667 0.00 0.00 0.00 4.63
3680 4207 5.745294 TCTCGGTATTTTTCGGTATTTCTCG 59.255 40.000 0.00 0.00 0.00 4.04
3681 4208 7.529880 TTCTCGGTATTTTTCGGTATTTCTC 57.470 36.000 0.00 0.00 0.00 2.87
3682 4209 9.774413 ATATTCTCGGTATTTTTCGGTATTTCT 57.226 29.630 0.00 0.00 0.00 2.52
3686 4213 8.706035 CGAAATATTCTCGGTATTTTTCGGTAT 58.294 33.333 15.44 0.00 40.01 2.73
3687 4214 7.920151 TCGAAATATTCTCGGTATTTTTCGGTA 59.080 33.333 19.20 8.14 41.95 4.02
3688 4215 6.757947 TCGAAATATTCTCGGTATTTTTCGGT 59.242 34.615 19.20 0.00 41.95 4.69
3689 4216 7.169035 TCGAAATATTCTCGGTATTTTTCGG 57.831 36.000 19.20 9.55 41.95 4.30
3690 4217 7.314944 CGTTCGAAATATTCTCGGTATTTTTCG 59.685 37.037 0.00 16.30 42.48 3.46
3691 4218 8.323140 TCGTTCGAAATATTCTCGGTATTTTTC 58.677 33.333 0.00 0.00 36.93 2.29
3692 4219 8.188531 TCGTTCGAAATATTCTCGGTATTTTT 57.811 30.769 0.00 0.00 36.93 1.94
3693 4220 7.760131 TCGTTCGAAATATTCTCGGTATTTT 57.240 32.000 0.00 0.00 36.93 1.82
3694 4221 7.760131 TTCGTTCGAAATATTCTCGGTATTT 57.240 32.000 0.00 0.00 36.93 1.40
3695 4222 7.941795 ATTCGTTCGAAATATTCTCGGTATT 57.058 32.000 11.50 0.00 36.93 1.89
3696 4223 7.941795 AATTCGTTCGAAATATTCTCGGTAT 57.058 32.000 11.50 0.00 36.93 2.73
3697 4224 7.760131 AAATTCGTTCGAAATATTCTCGGTA 57.240 32.000 11.50 6.19 36.93 4.02
3698 4225 6.657836 AAATTCGTTCGAAATATTCTCGGT 57.342 33.333 11.50 0.00 36.93 4.69
3744 4271 9.620660 GGTTCAAATGTTCGTTCATTAACTTAT 57.379 29.630 14.12 0.00 37.09 1.73
3745 4272 8.622157 TGGTTCAAATGTTCGTTCATTAACTTA 58.378 29.630 14.12 7.14 37.09 2.24
3746 4273 7.484975 TGGTTCAAATGTTCGTTCATTAACTT 58.515 30.769 14.12 0.00 37.09 2.66
3747 4274 7.033530 TGGTTCAAATGTTCGTTCATTAACT 57.966 32.000 14.12 0.22 37.09 2.24
3748 4275 7.687005 TTGGTTCAAATGTTCGTTCATTAAC 57.313 32.000 7.85 9.01 37.09 2.01
3749 4276 8.191446 TCTTTGGTTCAAATGTTCGTTCATTAA 58.809 29.630 7.85 0.00 37.09 1.40
3750 4277 7.646130 GTCTTTGGTTCAAATGTTCGTTCATTA 59.354 33.333 7.85 0.00 37.09 1.90
3751 4278 6.475402 GTCTTTGGTTCAAATGTTCGTTCATT 59.525 34.615 2.99 2.99 39.35 2.57
3752 4279 5.977129 GTCTTTGGTTCAAATGTTCGTTCAT 59.023 36.000 0.00 0.00 32.70 2.57
3753 4280 5.336744 GTCTTTGGTTCAAATGTTCGTTCA 58.663 37.500 0.00 0.00 32.70 3.18
3754 4281 4.738252 GGTCTTTGGTTCAAATGTTCGTTC 59.262 41.667 0.00 0.00 32.70 3.95
3755 4282 4.401202 AGGTCTTTGGTTCAAATGTTCGTT 59.599 37.500 0.00 0.00 32.70 3.85
3756 4283 3.951680 AGGTCTTTGGTTCAAATGTTCGT 59.048 39.130 0.00 0.00 32.70 3.85
3757 4284 4.275936 AGAGGTCTTTGGTTCAAATGTTCG 59.724 41.667 0.00 0.00 32.70 3.95
3758 4285 5.299279 TGAGAGGTCTTTGGTTCAAATGTTC 59.701 40.000 0.00 0.00 32.70 3.18
3759 4286 5.200483 TGAGAGGTCTTTGGTTCAAATGTT 58.800 37.500 0.00 0.00 32.70 2.71
3760 4287 4.792068 TGAGAGGTCTTTGGTTCAAATGT 58.208 39.130 0.00 0.00 32.70 2.71
3761 4288 5.772825 TTGAGAGGTCTTTGGTTCAAATG 57.227 39.130 0.00 0.00 32.70 2.32
3762 4289 6.154363 TGTTTTGAGAGGTCTTTGGTTCAAAT 59.846 34.615 0.00 0.00 35.32 2.32
3763 4290 5.478679 TGTTTTGAGAGGTCTTTGGTTCAAA 59.521 36.000 0.00 0.00 34.00 2.69
3764 4291 5.013547 TGTTTTGAGAGGTCTTTGGTTCAA 58.986 37.500 0.00 0.00 0.00 2.69
3765 4292 4.398044 GTGTTTTGAGAGGTCTTTGGTTCA 59.602 41.667 0.00 0.00 0.00 3.18
3766 4293 4.495844 CGTGTTTTGAGAGGTCTTTGGTTC 60.496 45.833 0.00 0.00 0.00 3.62
3767 4294 3.377172 CGTGTTTTGAGAGGTCTTTGGTT 59.623 43.478 0.00 0.00 0.00 3.67
3768 4295 2.943033 CGTGTTTTGAGAGGTCTTTGGT 59.057 45.455 0.00 0.00 0.00 3.67
3769 4296 3.202906 TCGTGTTTTGAGAGGTCTTTGG 58.797 45.455 0.00 0.00 0.00 3.28
3770 4297 4.332819 AGTTCGTGTTTTGAGAGGTCTTTG 59.667 41.667 0.00 0.00 0.00 2.77
3771 4298 4.514401 AGTTCGTGTTTTGAGAGGTCTTT 58.486 39.130 0.00 0.00 0.00 2.52
3772 4299 4.138487 AGTTCGTGTTTTGAGAGGTCTT 57.862 40.909 0.00 0.00 0.00 3.01
3773 4300 3.821421 AGTTCGTGTTTTGAGAGGTCT 57.179 42.857 0.00 0.00 0.00 3.85
3774 4301 3.988517 CCTAGTTCGTGTTTTGAGAGGTC 59.011 47.826 0.00 0.00 0.00 3.85
3775 4302 3.387050 ACCTAGTTCGTGTTTTGAGAGGT 59.613 43.478 0.00 0.00 0.00 3.85
3776 4303 3.991367 ACCTAGTTCGTGTTTTGAGAGG 58.009 45.455 0.00 0.00 0.00 3.69
3777 4304 4.448060 GGAACCTAGTTCGTGTTTTGAGAG 59.552 45.833 1.66 0.00 42.78 3.20
3778 4305 4.374399 GGAACCTAGTTCGTGTTTTGAGA 58.626 43.478 1.66 0.00 42.78 3.27
3779 4306 3.183775 CGGAACCTAGTTCGTGTTTTGAG 59.816 47.826 1.66 0.00 42.78 3.02
3780 4307 3.125316 CGGAACCTAGTTCGTGTTTTGA 58.875 45.455 1.66 0.00 42.78 2.69
3781 4308 3.060070 GTCGGAACCTAGTTCGTGTTTTG 60.060 47.826 1.66 0.00 42.78 2.44
3782 4309 3.126073 GTCGGAACCTAGTTCGTGTTTT 58.874 45.455 1.66 0.00 42.78 2.43
3783 4310 2.546584 GGTCGGAACCTAGTTCGTGTTT 60.547 50.000 1.66 0.00 42.78 2.83
3784 4311 1.000171 GGTCGGAACCTAGTTCGTGTT 60.000 52.381 1.66 0.00 42.78 3.32
3785 4312 0.600057 GGTCGGAACCTAGTTCGTGT 59.400 55.000 1.66 0.00 42.78 4.49
3786 4313 0.599558 TGGTCGGAACCTAGTTCGTG 59.400 55.000 1.66 0.00 46.60 4.35
3787 4314 1.000171 GTTGGTCGGAACCTAGTTCGT 60.000 52.381 1.66 0.00 46.60 3.85
3788 4315 1.000060 TGTTGGTCGGAACCTAGTTCG 60.000 52.381 1.66 0.00 46.60 3.95
3789 4316 2.825861 TGTTGGTCGGAACCTAGTTC 57.174 50.000 0.00 0.00 46.60 3.01
3790 4317 2.809299 GCTTGTTGGTCGGAACCTAGTT 60.809 50.000 0.00 0.00 46.60 2.24
3791 4318 1.270678 GCTTGTTGGTCGGAACCTAGT 60.271 52.381 0.00 0.00 46.60 2.57
3792 4319 1.439679 GCTTGTTGGTCGGAACCTAG 58.560 55.000 0.00 0.00 46.60 3.02
3793 4320 0.035739 GGCTTGTTGGTCGGAACCTA 59.964 55.000 0.00 0.00 46.60 3.08
3794 4321 1.228154 GGCTTGTTGGTCGGAACCT 60.228 57.895 0.00 0.00 46.60 3.50
3795 4322 1.104577 TTGGCTTGTTGGTCGGAACC 61.105 55.000 0.00 0.00 46.66 3.62
3796 4323 0.741915 TTTGGCTTGTTGGTCGGAAC 59.258 50.000 0.00 0.00 0.00 3.62
3797 4324 1.135333 GTTTTGGCTTGTTGGTCGGAA 59.865 47.619 0.00 0.00 0.00 4.30
3798 4325 0.741915 GTTTTGGCTTGTTGGTCGGA 59.258 50.000 0.00 0.00 0.00 4.55
3799 4326 0.249280 GGTTTTGGCTTGTTGGTCGG 60.249 55.000 0.00 0.00 0.00 4.79
3800 4327 0.457851 TGGTTTTGGCTTGTTGGTCG 59.542 50.000 0.00 0.00 0.00 4.79
3801 4328 2.093711 AGTTGGTTTTGGCTTGTTGGTC 60.094 45.455 0.00 0.00 0.00 4.02
3802 4329 1.905894 AGTTGGTTTTGGCTTGTTGGT 59.094 42.857 0.00 0.00 0.00 3.67
3803 4330 2.168313 AGAGTTGGTTTTGGCTTGTTGG 59.832 45.455 0.00 0.00 0.00 3.77
3804 4331 3.119173 TGAGAGTTGGTTTTGGCTTGTTG 60.119 43.478 0.00 0.00 0.00 3.33
3805 4332 3.096092 TGAGAGTTGGTTTTGGCTTGTT 58.904 40.909 0.00 0.00 0.00 2.83
3806 4333 2.733956 TGAGAGTTGGTTTTGGCTTGT 58.266 42.857 0.00 0.00 0.00 3.16
3807 4334 3.318839 TCATGAGAGTTGGTTTTGGCTTG 59.681 43.478 0.00 0.00 0.00 4.01
3808 4335 3.565307 TCATGAGAGTTGGTTTTGGCTT 58.435 40.909 0.00 0.00 0.00 4.35
3809 4336 3.228188 TCATGAGAGTTGGTTTTGGCT 57.772 42.857 0.00 0.00 0.00 4.75
3810 4337 5.841957 ATATCATGAGAGTTGGTTTTGGC 57.158 39.130 0.09 0.00 0.00 4.52
3900 4427 4.657436 AAATCCACGTACCAAGCAAAAA 57.343 36.364 0.00 0.00 0.00 1.94
3901 4428 4.023021 GGTAAATCCACGTACCAAGCAAAA 60.023 41.667 0.00 0.00 39.73 2.44
3902 4429 3.502979 GGTAAATCCACGTACCAAGCAAA 59.497 43.478 0.00 0.00 39.73 3.68
3903 4430 3.075884 GGTAAATCCACGTACCAAGCAA 58.924 45.455 0.00 0.00 39.73 3.91
3904 4431 2.702261 GGTAAATCCACGTACCAAGCA 58.298 47.619 0.00 0.00 39.73 3.91
3905 4432 1.662122 CGGTAAATCCACGTACCAAGC 59.338 52.381 3.96 0.00 39.92 4.01
3906 4433 3.184541 CTCGGTAAATCCACGTACCAAG 58.815 50.000 3.96 0.00 39.92 3.61
3907 4434 2.094078 CCTCGGTAAATCCACGTACCAA 60.094 50.000 3.96 0.00 39.92 3.67
3908 4435 1.477700 CCTCGGTAAATCCACGTACCA 59.522 52.381 3.96 0.00 39.92 3.25
3909 4436 1.202452 CCCTCGGTAAATCCACGTACC 60.202 57.143 0.00 0.00 37.08 3.34
3910 4437 1.202452 CCCCTCGGTAAATCCACGTAC 60.202 57.143 0.00 0.00 35.57 3.67
3911 4438 1.113788 CCCCTCGGTAAATCCACGTA 58.886 55.000 0.00 0.00 35.57 3.57
3912 4439 1.902556 CCCCTCGGTAAATCCACGT 59.097 57.895 0.00 0.00 35.57 4.49
3913 4440 1.523032 GCCCCTCGGTAAATCCACG 60.523 63.158 0.00 0.00 35.57 4.94
3914 4441 0.746923 GTGCCCCTCGGTAAATCCAC 60.747 60.000 0.00 0.00 35.57 4.02
3915 4442 1.605453 GTGCCCCTCGGTAAATCCA 59.395 57.895 0.00 0.00 35.57 3.41
3916 4443 1.523032 CGTGCCCCTCGGTAAATCC 60.523 63.158 0.00 0.00 0.00 3.01
3917 4444 1.523032 CCGTGCCCCTCGGTAAATC 60.523 63.158 0.00 0.00 42.62 2.17
3918 4445 1.555477 TTCCGTGCCCCTCGGTAAAT 61.555 55.000 4.36 0.00 46.86 1.40
3919 4446 1.766625 TTTCCGTGCCCCTCGGTAAA 61.767 55.000 4.36 2.21 46.86 2.01
3920 4447 1.555477 ATTTCCGTGCCCCTCGGTAA 61.555 55.000 4.36 1.98 46.86 2.85
3921 4448 0.687098 TATTTCCGTGCCCCTCGGTA 60.687 55.000 4.36 0.00 46.86 4.02
3922 4449 1.991167 TATTTCCGTGCCCCTCGGT 60.991 57.895 4.36 0.00 46.86 4.69
3924 4451 1.881252 CGTATTTCCGTGCCCCTCG 60.881 63.158 0.00 0.00 0.00 4.63
3925 4452 2.178235 GCGTATTTCCGTGCCCCTC 61.178 63.158 0.00 0.00 0.00 4.30
3926 4453 2.124860 GCGTATTTCCGTGCCCCT 60.125 61.111 0.00 0.00 0.00 4.79
3927 4454 3.569690 CGCGTATTTCCGTGCCCC 61.570 66.667 0.00 0.00 0.00 5.80
3928 4455 2.904470 TACCGCGTATTTCCGTGCCC 62.904 60.000 4.92 0.00 37.03 5.36
3929 4456 1.083242 TTACCGCGTATTTCCGTGCC 61.083 55.000 4.92 0.00 37.03 5.01
3930 4457 0.025384 GTTACCGCGTATTTCCGTGC 59.975 55.000 4.92 0.00 37.03 5.34
3931 4458 0.646895 GGTTACCGCGTATTTCCGTG 59.353 55.000 4.92 0.00 38.04 4.94
3932 4459 0.246086 TGGTTACCGCGTATTTCCGT 59.754 50.000 4.92 0.00 0.00 4.69
3933 4460 1.259507 CATGGTTACCGCGTATTTCCG 59.740 52.381 4.92 0.00 0.00 4.30
3934 4461 1.600485 CCATGGTTACCGCGTATTTCC 59.400 52.381 4.92 1.35 0.00 3.13
3935 4462 2.282407 ACCATGGTTACCGCGTATTTC 58.718 47.619 13.00 0.00 0.00 2.17
3936 4463 2.406596 ACCATGGTTACCGCGTATTT 57.593 45.000 13.00 0.00 0.00 1.40
3937 4464 3.540314 TTACCATGGTTACCGCGTATT 57.460 42.857 25.38 0.00 0.00 1.89
3938 4465 3.540314 TTTACCATGGTTACCGCGTAT 57.460 42.857 25.38 0.00 0.00 3.06
3939 4466 3.132646 AGATTTACCATGGTTACCGCGTA 59.867 43.478 25.38 0.00 0.00 4.42
3940 4467 2.093341 AGATTTACCATGGTTACCGCGT 60.093 45.455 25.38 2.45 0.00 6.01
3941 4468 2.542595 GAGATTTACCATGGTTACCGCG 59.457 50.000 25.38 0.00 0.00 6.46
3942 4469 2.542595 CGAGATTTACCATGGTTACCGC 59.457 50.000 25.38 9.18 0.00 5.68
3943 4470 4.049546 TCGAGATTTACCATGGTTACCG 57.950 45.455 25.38 17.10 0.00 4.02
3944 4471 6.937436 ATTTCGAGATTTACCATGGTTACC 57.063 37.500 25.38 8.49 0.00 2.85
3945 4472 8.836959 GAAATTTCGAGATTTACCATGGTTAC 57.163 34.615 25.38 11.95 29.75 2.50
3963 4490 4.486574 TTTGGTTACCGGTCGAAATTTC 57.513 40.909 12.40 8.20 0.00 2.17
3964 4491 4.499526 GGTTTTGGTTACCGGTCGAAATTT 60.500 41.667 12.40 0.00 0.00 1.82
3965 4492 3.004629 GGTTTTGGTTACCGGTCGAAATT 59.995 43.478 12.40 0.00 0.00 1.82
3966 4493 2.553602 GGTTTTGGTTACCGGTCGAAAT 59.446 45.455 12.40 0.00 0.00 2.17
3967 4494 1.946081 GGTTTTGGTTACCGGTCGAAA 59.054 47.619 12.40 6.74 0.00 3.46
3968 4495 1.140652 AGGTTTTGGTTACCGGTCGAA 59.859 47.619 12.40 0.00 40.69 3.71
3969 4496 0.758123 AGGTTTTGGTTACCGGTCGA 59.242 50.000 12.40 0.00 40.69 4.20
3970 4497 1.264826 CAAGGTTTTGGTTACCGGTCG 59.735 52.381 12.40 0.00 40.69 4.79
3971 4498 2.574450 TCAAGGTTTTGGTTACCGGTC 58.426 47.619 12.40 0.00 40.69 4.79
3972 4499 2.732844 TCAAGGTTTTGGTTACCGGT 57.267 45.000 13.98 13.98 40.69 5.28
3973 4500 3.319689 ACAATCAAGGTTTTGGTTACCGG 59.680 43.478 0.00 0.00 35.47 5.28
3974 4501 4.036971 TCACAATCAAGGTTTTGGTTACCG 59.963 41.667 0.00 0.00 35.47 4.02
3975 4502 5.523438 TCACAATCAAGGTTTTGGTTACC 57.477 39.130 0.00 0.00 35.47 2.85
3976 4503 6.744112 TGATCACAATCAAGGTTTTGGTTAC 58.256 36.000 0.00 0.00 38.97 2.50
3977 4504 6.968263 TGATCACAATCAAGGTTTTGGTTA 57.032 33.333 0.00 0.00 38.97 2.85
3978 4505 5.867903 TGATCACAATCAAGGTTTTGGTT 57.132 34.783 0.00 0.00 38.97 3.67
3979 4506 5.867903 TTGATCACAATCAAGGTTTTGGT 57.132 34.783 0.00 0.00 44.94 3.67
3995 4522 9.317936 CAGTATAGCTGTAAAGTGATTTGATCA 57.682 33.333 0.00 0.00 40.27 2.92
3996 4523 8.279103 GCAGTATAGCTGTAAAGTGATTTGATC 58.721 37.037 0.00 0.00 46.64 2.92
3997 4524 7.989741 AGCAGTATAGCTGTAAAGTGATTTGAT 59.010 33.333 0.00 0.00 46.64 2.57
3998 4525 7.331026 AGCAGTATAGCTGTAAAGTGATTTGA 58.669 34.615 0.00 0.00 46.64 2.69
3999 4526 7.545362 AGCAGTATAGCTGTAAAGTGATTTG 57.455 36.000 0.00 0.00 46.64 2.32
4000 4527 8.258007 TGTAGCAGTATAGCTGTAAAGTGATTT 58.742 33.333 0.00 0.00 46.11 2.17
4001 4528 7.782049 TGTAGCAGTATAGCTGTAAAGTGATT 58.218 34.615 0.00 0.00 46.11 2.57
4002 4529 7.068839 ACTGTAGCAGTATAGCTGTAAAGTGAT 59.931 37.037 0.00 0.00 43.46 3.06
4003 4530 6.377429 ACTGTAGCAGTATAGCTGTAAAGTGA 59.623 38.462 0.00 0.00 43.46 3.41
4004 4531 6.565234 ACTGTAGCAGTATAGCTGTAAAGTG 58.435 40.000 0.00 0.00 43.46 3.16
4005 4532 6.777213 ACTGTAGCAGTATAGCTGTAAAGT 57.223 37.500 0.00 1.65 43.46 2.66
4006 4533 7.644551 GTGTACTGTAGCAGTATAGCTGTAAAG 59.355 40.741 11.49 0.00 46.56 1.85
4007 4534 7.338703 AGTGTACTGTAGCAGTATAGCTGTAAA 59.661 37.037 11.49 0.00 46.56 2.01
4008 4535 6.827251 AGTGTACTGTAGCAGTATAGCTGTAA 59.173 38.462 11.49 0.00 46.56 2.41
4009 4536 6.354938 AGTGTACTGTAGCAGTATAGCTGTA 58.645 40.000 11.49 0.00 46.56 2.74
4010 4537 5.194432 AGTGTACTGTAGCAGTATAGCTGT 58.806 41.667 11.49 0.00 46.56 4.40
4011 4538 5.759506 AGTGTACTGTAGCAGTATAGCTG 57.240 43.478 11.49 0.00 46.56 4.24
4012 4539 9.742144 ATTATAGTGTACTGTAGCAGTATAGCT 57.258 33.333 11.49 11.56 46.56 3.32
4041 4568 2.824341 CAGCCAAGCAAAGAGGAAATCT 59.176 45.455 0.00 0.00 41.27 2.40
4042 4569 2.821969 TCAGCCAAGCAAAGAGGAAATC 59.178 45.455 0.00 0.00 0.00 2.17
4043 4570 2.880443 TCAGCCAAGCAAAGAGGAAAT 58.120 42.857 0.00 0.00 0.00 2.17
4044 4571 2.363306 TCAGCCAAGCAAAGAGGAAA 57.637 45.000 0.00 0.00 0.00 3.13
4045 4572 2.363306 TTCAGCCAAGCAAAGAGGAA 57.637 45.000 0.00 0.00 0.00 3.36
4046 4573 2.559668 CAATTCAGCCAAGCAAAGAGGA 59.440 45.455 0.00 0.00 0.00 3.71
4047 4574 2.559668 TCAATTCAGCCAAGCAAAGAGG 59.440 45.455 0.00 0.00 0.00 3.69
4048 4575 3.928727 TCAATTCAGCCAAGCAAAGAG 57.071 42.857 0.00 0.00 0.00 2.85
4049 4576 4.322198 GGAATCAATTCAGCCAAGCAAAGA 60.322 41.667 5.19 0.00 38.53 2.52
4050 4577 3.930848 GGAATCAATTCAGCCAAGCAAAG 59.069 43.478 5.19 0.00 38.53 2.77
4051 4578 3.579586 AGGAATCAATTCAGCCAAGCAAA 59.420 39.130 5.19 0.00 38.53 3.68
4052 4579 3.056393 CAGGAATCAATTCAGCCAAGCAA 60.056 43.478 5.19 0.00 38.53 3.91
4053 4580 2.494471 CAGGAATCAATTCAGCCAAGCA 59.506 45.455 5.19 0.00 38.53 3.91
4054 4581 2.756760 TCAGGAATCAATTCAGCCAAGC 59.243 45.455 5.19 0.00 38.53 4.01
4055 4582 4.461781 ACTTCAGGAATCAATTCAGCCAAG 59.538 41.667 5.19 4.11 38.53 3.61
4056 4583 4.410099 ACTTCAGGAATCAATTCAGCCAA 58.590 39.130 5.19 0.00 38.53 4.52
4057 4584 4.012374 GACTTCAGGAATCAATTCAGCCA 58.988 43.478 5.19 0.00 38.53 4.75
4058 4585 3.379688 GGACTTCAGGAATCAATTCAGCC 59.620 47.826 5.19 0.00 38.53 4.85
4059 4586 3.064545 CGGACTTCAGGAATCAATTCAGC 59.935 47.826 5.19 0.00 38.53 4.26
4060 4587 3.064545 GCGGACTTCAGGAATCAATTCAG 59.935 47.826 5.19 0.00 38.53 3.02
4061 4588 3.009723 GCGGACTTCAGGAATCAATTCA 58.990 45.455 5.19 0.00 38.53 2.57
4062 4589 3.274288 AGCGGACTTCAGGAATCAATTC 58.726 45.455 0.00 0.00 36.08 2.17
4063 4590 3.274288 GAGCGGACTTCAGGAATCAATT 58.726 45.455 0.00 0.00 0.00 2.32
4064 4591 2.237143 TGAGCGGACTTCAGGAATCAAT 59.763 45.455 0.00 0.00 0.00 2.57
4065 4592 1.623311 TGAGCGGACTTCAGGAATCAA 59.377 47.619 0.00 0.00 0.00 2.57
4066 4593 1.266178 TGAGCGGACTTCAGGAATCA 58.734 50.000 0.00 0.00 0.00 2.57
4067 4594 2.386661 TTGAGCGGACTTCAGGAATC 57.613 50.000 0.00 0.00 0.00 2.52
4068 4595 2.427506 GTTTGAGCGGACTTCAGGAAT 58.572 47.619 0.00 0.00 0.00 3.01
4069 4596 1.542547 GGTTTGAGCGGACTTCAGGAA 60.543 52.381 0.00 0.00 0.00 3.36
4070 4597 0.034896 GGTTTGAGCGGACTTCAGGA 59.965 55.000 0.00 0.00 0.00 3.86
4071 4598 0.955919 GGGTTTGAGCGGACTTCAGG 60.956 60.000 0.00 0.00 0.00 3.86
4072 4599 0.035458 AGGGTTTGAGCGGACTTCAG 59.965 55.000 0.00 0.00 0.00 3.02
4073 4600 1.275291 CTAGGGTTTGAGCGGACTTCA 59.725 52.381 0.00 0.00 0.00 3.02
4074 4601 2.007547 GCTAGGGTTTGAGCGGACTTC 61.008 57.143 0.00 0.00 0.00 3.01
4075 4602 0.036294 GCTAGGGTTTGAGCGGACTT 60.036 55.000 0.00 0.00 0.00 3.01
4076 4603 0.905337 AGCTAGGGTTTGAGCGGACT 60.905 55.000 0.00 0.00 43.72 3.85
4077 4604 0.036294 AAGCTAGGGTTTGAGCGGAC 60.036 55.000 0.00 0.00 43.72 4.79
4078 4605 0.249398 GAAGCTAGGGTTTGAGCGGA 59.751 55.000 0.00 0.00 43.72 5.54
4079 4606 0.250513 AGAAGCTAGGGTTTGAGCGG 59.749 55.000 0.00 0.00 43.72 5.52
4080 4607 2.961526 TAGAAGCTAGGGTTTGAGCG 57.038 50.000 0.00 0.00 43.72 5.03
4081 4608 4.271291 CGATTTAGAAGCTAGGGTTTGAGC 59.729 45.833 0.00 0.00 39.08 4.26
4082 4609 5.661458 TCGATTTAGAAGCTAGGGTTTGAG 58.339 41.667 0.00 0.00 0.00 3.02
4083 4610 5.670792 TCGATTTAGAAGCTAGGGTTTGA 57.329 39.130 0.00 0.00 0.00 2.69
4084 4611 5.467063 GGATCGATTTAGAAGCTAGGGTTTG 59.533 44.000 0.00 0.00 0.00 2.93
4085 4612 5.454897 GGGATCGATTTAGAAGCTAGGGTTT 60.455 44.000 0.00 0.00 0.00 3.27
4086 4613 4.040584 GGGATCGATTTAGAAGCTAGGGTT 59.959 45.833 0.00 0.00 0.00 4.11
4087 4614 3.579151 GGGATCGATTTAGAAGCTAGGGT 59.421 47.826 0.00 0.00 0.00 4.34
4088 4615 3.055747 GGGGATCGATTTAGAAGCTAGGG 60.056 52.174 0.00 0.00 0.00 3.53
4089 4616 3.835395 AGGGGATCGATTTAGAAGCTAGG 59.165 47.826 0.00 0.00 0.00 3.02
4090 4617 5.221541 ACAAGGGGATCGATTTAGAAGCTAG 60.222 44.000 0.00 0.00 0.00 3.42
4091 4618 4.654262 ACAAGGGGATCGATTTAGAAGCTA 59.346 41.667 0.00 0.00 0.00 3.32
4092 4619 3.456277 ACAAGGGGATCGATTTAGAAGCT 59.544 43.478 0.00 0.00 0.00 3.74
4093 4620 3.809905 ACAAGGGGATCGATTTAGAAGC 58.190 45.455 0.00 0.00 0.00 3.86
4094 4621 5.467063 GCTTACAAGGGGATCGATTTAGAAG 59.533 44.000 0.00 0.00 0.00 2.85
4095 4622 5.104693 TGCTTACAAGGGGATCGATTTAGAA 60.105 40.000 0.00 0.00 0.00 2.10
4096 4623 4.407621 TGCTTACAAGGGGATCGATTTAGA 59.592 41.667 0.00 0.00 0.00 2.10
4097 4624 4.703897 TGCTTACAAGGGGATCGATTTAG 58.296 43.478 0.00 0.00 0.00 1.85
4098 4625 4.764050 TGCTTACAAGGGGATCGATTTA 57.236 40.909 0.00 0.00 0.00 1.40
4099 4626 3.644966 TGCTTACAAGGGGATCGATTT 57.355 42.857 0.00 0.00 0.00 2.17
4100 4627 3.136443 TGATGCTTACAAGGGGATCGATT 59.864 43.478 0.00 0.00 33.89 3.34
4101 4628 2.705658 TGATGCTTACAAGGGGATCGAT 59.294 45.455 0.00 0.00 33.89 3.59
4102 4629 2.115427 TGATGCTTACAAGGGGATCGA 58.885 47.619 0.00 0.00 33.89 3.59
4103 4630 2.614057 GTTGATGCTTACAAGGGGATCG 59.386 50.000 0.00 0.00 33.89 3.69
4104 4631 3.378427 GTGTTGATGCTTACAAGGGGATC 59.622 47.826 0.00 0.00 0.00 3.36
4105 4632 3.010584 AGTGTTGATGCTTACAAGGGGAT 59.989 43.478 0.00 0.00 0.00 3.85
4106 4633 2.375174 AGTGTTGATGCTTACAAGGGGA 59.625 45.455 0.00 0.00 0.00 4.81
4107 4634 2.489329 CAGTGTTGATGCTTACAAGGGG 59.511 50.000 0.00 0.00 0.00 4.79
4108 4635 3.149196 ACAGTGTTGATGCTTACAAGGG 58.851 45.455 0.00 0.00 0.00 3.95
4109 4636 5.470098 AGTTACAGTGTTGATGCTTACAAGG 59.530 40.000 0.00 0.00 0.00 3.61
4160 4687 7.538334 GCCAACAAAATGAAATCAAAAATAGCC 59.462 33.333 0.00 0.00 0.00 3.93
4176 4703 7.446013 ACATTCAGAAATCATTGCCAACAAAAT 59.554 29.630 0.00 0.00 39.77 1.82


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.