Multiple sequence alignment - TraesCS5B01G553600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G553600 chr5B 100.000 2840 0 0 1 2840 703555856 703553017 0.000000e+00 5245.0
1 TraesCS5B01G553600 chr5B 94.416 591 30 3 239 827 699421667 699421078 0.000000e+00 905.0
2 TraesCS5B01G553600 chr5B 89.947 189 17 2 36 223 52246449 52246636 2.830000e-60 243.0
3 TraesCS5B01G553600 chr5B 79.195 149 25 6 237 382 685254632 685254777 6.480000e-17 99.0
4 TraesCS5B01G553600 chr7D 93.935 1517 62 12 828 2321 272591466 272589957 0.000000e+00 2265.0
5 TraesCS5B01G553600 chr7D 94.440 1277 47 9 993 2257 83328213 83329477 0.000000e+00 1943.0
6 TraesCS5B01G553600 chr7D 91.189 1362 66 13 1008 2321 56406495 56407850 0.000000e+00 1801.0
7 TraesCS5B01G553600 chr7D 88.889 279 21 6 828 1105 503760257 503759988 4.530000e-88 335.0
8 TraesCS5B01G553600 chr7D 92.558 215 16 0 840 1054 83328001 83328215 2.750000e-80 309.0
9 TraesCS5B01G553600 chr7D 96.237 186 7 0 2304 2489 83329466 83329651 3.550000e-79 305.0
10 TraesCS5B01G553600 chr7D 90.857 175 15 1 36 209 633442475 633442301 1.700000e-57 233.0
11 TraesCS5B01G553600 chr7D 90.857 175 15 1 36 209 633457215 633457041 1.700000e-57 233.0
12 TraesCS5B01G553600 chr7D 86.058 208 17 4 41 244 37971135 37971334 2.220000e-51 213.0
13 TraesCS5B01G553600 chr7B 92.725 1512 84 9 993 2489 729352796 729351296 0.000000e+00 2159.0
14 TraesCS5B01G553600 chr7B 92.511 227 17 0 828 1054 526800280 526800054 2.730000e-85 326.0
15 TraesCS5B01G553600 chr7B 89.947 189 17 2 36 223 730902302 730902115 2.830000e-60 243.0
16 TraesCS5B01G553600 chr7B 89.130 184 18 2 40 221 738983202 738983019 7.920000e-56 228.0
17 TraesCS5B01G553600 chr7B 88.587 184 19 2 40 221 739037477 739037294 3.680000e-54 222.0
18 TraesCS5B01G553600 chr7B 100.000 37 0 0 1 37 239263421 239263385 5.080000e-08 69.4
19 TraesCS5B01G553600 chr7B 93.333 45 2 1 1 45 694494743 694494786 6.570000e-07 65.8
20 TraesCS5B01G553600 chr7B 96.875 32 1 0 211 242 55111011 55110980 1.000000e-03 54.7
21 TraesCS5B01G553600 chr1D 92.141 1527 73 20 833 2321 81232192 81233709 0.000000e+00 2111.0
22 TraesCS5B01G553600 chr1D 91.765 1360 54 11 1008 2321 470875211 470873864 0.000000e+00 1838.0
23 TraesCS5B01G553600 chr1D 94.845 194 8 2 2646 2838 81233706 81233898 4.600000e-78 302.0
24 TraesCS5B01G553600 chr1D 94.937 158 6 2 833 989 413307454 413307298 2.190000e-61 246.0
25 TraesCS5B01G553600 chr1D 92.941 170 10 2 821 989 461375193 461375025 2.190000e-61 246.0
26 TraesCS5B01G553600 chr1D 89.444 180 17 2 41 218 487760089 487759910 2.850000e-55 226.0
27 TraesCS5B01G553600 chr1D 86.885 183 22 2 36 216 8466020 8465838 1.330000e-48 204.0
28 TraesCS5B01G553600 chr1D 87.209 172 21 1 40 210 481403522 481403693 8.030000e-46 195.0
29 TraesCS5B01G553600 chr1D 85.227 176 25 1 48 223 99737034 99737208 2.250000e-41 180.0
30 TraesCS5B01G553600 chr6D 91.333 1523 74 17 828 2321 254935945 254937438 0.000000e+00 2028.0
31 TraesCS5B01G553600 chr6D 92.021 1316 55 11 1003 2282 417545728 417544427 0.000000e+00 1803.0
32 TraesCS5B01G553600 chr6D 95.408 196 5 3 2646 2840 470598268 470598076 2.750000e-80 309.0
33 TraesCS5B01G553600 chr6D 94.872 195 6 3 2646 2838 465025150 465025342 4.600000e-78 302.0
34 TraesCS5B01G553600 chr6D 94.845 194 7 2 2646 2838 8856678 8856487 1.650000e-77 300.0
35 TraesCS5B01G553600 chr6D 88.053 226 9 5 828 1052 465023254 465023462 4.700000e-63 252.0
36 TraesCS5B01G553600 chr6D 94.904 157 8 0 833 989 417545994 417545838 2.190000e-61 246.0
37 TraesCS5B01G553600 chr6D 87.225 227 11 5 827 1052 390006826 390007035 2.830000e-60 243.0
38 TraesCS5B01G553600 chr6D 92.216 167 11 2 824 989 2970342 2970507 4.730000e-58 235.0
39 TraesCS5B01G553600 chr6D 87.821 156 12 2 56 210 293809127 293809276 2.910000e-40 176.0
40 TraesCS5B01G553600 chr4D 91.196 1522 70 14 828 2321 454441378 454442863 0.000000e+00 2010.0
41 TraesCS5B01G553600 chr4D 94.845 194 7 2 2646 2838 503631563 503631754 1.650000e-77 300.0
42 TraesCS5B01G553600 chr4D 93.210 162 11 0 828 989 143573302 143573141 3.660000e-59 239.0
43 TraesCS5B01G553600 chr4D 90.419 167 14 2 821 986 503629940 503630105 4.760000e-53 219.0
44 TraesCS5B01G553600 chr4D 87.302 189 22 2 36 223 477455775 477455962 6.160000e-52 215.0
45 TraesCS5B01G553600 chr4D 88.889 171 18 1 41 210 496174324 496174494 2.870000e-50 209.0
46 TraesCS5B01G553600 chr4D 87.500 168 18 3 36 202 294451580 294451745 1.040000e-44 191.0
47 TraesCS5B01G553600 chrUn 92.942 1346 61 6 1003 2321 79889359 79890697 0.000000e+00 1929.0
48 TraesCS5B01G553600 chrUn 92.039 1344 70 6 1008 2321 314982628 314983964 0.000000e+00 1855.0
49 TraesCS5B01G553600 chrUn 92.039 1344 69 7 1008 2321 315004666 315006001 0.000000e+00 1855.0
50 TraesCS5B01G553600 chrUn 92.039 1344 70 6 1008 2321 365786186 365784850 0.000000e+00 1855.0
51 TraesCS5B01G553600 chrUn 88.053 226 9 5 828 1052 8335942 8335734 4.700000e-63 252.0
52 TraesCS5B01G553600 chrUn 88.053 226 9 5 828 1052 30431623 30431415 4.700000e-63 252.0
53 TraesCS5B01G553600 chrUn 92.638 163 10 2 828 989 273858689 273858850 1.700000e-57 233.0
54 TraesCS5B01G553600 chrUn 93.038 158 9 2 833 989 17575438 17575282 2.200000e-56 230.0
55 TraesCS5B01G553600 chrUn 93.038 158 9 2 833 989 381699901 381699745 2.200000e-56 230.0
56 TraesCS5B01G553600 chrUn 91.358 162 14 0 828 989 79889144 79889305 3.680000e-54 222.0
57 TraesCS5B01G553600 chrUn 89.571 163 15 2 828 989 314982408 314982569 3.710000e-49 206.0
58 TraesCS5B01G553600 chrUn 88.957 163 16 2 828 989 315004446 315004607 1.730000e-47 200.0
59 TraesCS5B01G553600 chrUn 87.574 169 20 1 42 209 316804376 316804544 8.030000e-46 195.0
60 TraesCS5B01G553600 chrUn 86.441 177 23 1 41 216 240229659 240229483 2.890000e-45 193.0
61 TraesCS5B01G553600 chrUn 97.368 76 2 0 914 989 365786320 365786245 2.300000e-26 130.0
62 TraesCS5B01G553600 chrUn 100.000 35 0 0 1 35 16186997 16187031 6.570000e-07 65.8
63 TraesCS5B01G553600 chrUn 100.000 35 0 0 1 35 228122150 228122184 6.570000e-07 65.8
64 TraesCS5B01G553600 chrUn 100.000 35 0 0 1 35 299604044 299604078 6.570000e-07 65.8
65 TraesCS5B01G553600 chrUn 100.000 35 0 0 1 35 404931623 404931589 6.570000e-07 65.8
66 TraesCS5B01G553600 chrUn 97.222 36 1 0 1 36 41631955 41631990 8.500000e-06 62.1
67 TraesCS5B01G553600 chrUn 97.222 36 1 0 1 36 275300232 275300267 8.500000e-06 62.1
68 TraesCS5B01G553600 chrUn 94.872 39 2 0 1 39 275632852 275632814 8.500000e-06 62.1
69 TraesCS5B01G553600 chrUn 94.872 39 2 0 1 39 275636695 275636657 8.500000e-06 62.1
70 TraesCS5B01G553600 chrUn 97.222 36 1 0 1 36 299798067 299798032 8.500000e-06 62.1
71 TraesCS5B01G553600 chr3D 92.868 1346 61 19 1008 2321 594764927 594763585 0.000000e+00 1921.0
72 TraesCS5B01G553600 chr3D 91.685 1347 65 17 1008 2321 549347037 549345705 0.000000e+00 1823.0
73 TraesCS5B01G553600 chr3D 93.373 166 10 1 825 989 61660742 61660577 7.860000e-61 244.0
74 TraesCS5B01G553600 chr3D 88.889 189 19 2 36 223 27244516 27244329 6.120000e-57 231.0
75 TraesCS5B01G553600 chr3D 89.773 176 17 1 36 210 27242434 27242609 1.020000e-54 224.0
76 TraesCS5B01G553600 chr3D 81.463 205 29 6 40 238 509301178 509301379 2.930000e-35 159.0
77 TraesCS5B01G553600 chr5D 92.868 1346 59 8 1008 2321 482933894 482932554 0.000000e+00 1919.0
78 TraesCS5B01G553600 chr5D 94.444 162 9 0 828 989 552496270 552496109 1.690000e-62 250.0
79 TraesCS5B01G553600 chr5D 93.373 166 9 2 825 989 539727298 539727462 7.860000e-61 244.0
80 TraesCS5B01G553600 chr5D 88.701 177 15 4 32 205 548043871 548043697 7.970000e-51 211.0
81 TraesCS5B01G553600 chr4A 90.614 277 23 3 237 510 624437059 624437335 5.780000e-97 364.0
82 TraesCS5B01G553600 chr4A 91.623 191 15 1 237 426 624465688 624465878 2.170000e-66 263.0
83 TraesCS5B01G553600 chr4A 87.568 185 20 3 41 223 297176885 297177068 7.970000e-51 211.0
84 TraesCS5B01G553600 chr4A 88.636 176 17 3 49 223 729218672 729218845 7.970000e-51 211.0
85 TraesCS5B01G553600 chr4A 97.436 39 1 0 1 39 702104140 702104178 1.830000e-07 67.6
86 TraesCS5B01G553600 chr4A 97.436 39 1 0 1 39 733387063 733387101 1.830000e-07 67.6
87 TraesCS5B01G553600 chr4A 97.368 38 1 0 1 38 656046471 656046434 6.570000e-07 65.8
88 TraesCS5B01G553600 chr4A 97.297 37 1 0 1 37 687040883 687040919 2.360000e-06 63.9
89 TraesCS5B01G553600 chr4A 95.122 41 1 1 1 41 715387531 715387492 2.360000e-06 63.9
90 TraesCS5B01G553600 chr4A 97.143 35 1 0 1 35 692066997 692067031 3.060000e-05 60.2
91 TraesCS5B01G553600 chr2B 92.070 227 18 0 828 1054 63820262 63820036 1.270000e-83 320.0
92 TraesCS5B01G553600 chr2B 92.045 176 13 1 36 210 571337475 571337650 2.190000e-61 246.0
93 TraesCS5B01G553600 chr2B 89.840 187 17 2 36 220 588158162 588158348 3.660000e-59 239.0
94 TraesCS5B01G553600 chr2B 86.932 176 22 1 36 210 765796878 765796703 2.230000e-46 196.0
95 TraesCS5B01G553600 chr2B 97.500 40 1 0 1 40 101444300 101444261 5.080000e-08 69.4
96 TraesCS5B01G553600 chr6B 95.361 194 6 2 2646 2838 659677608 659677799 3.550000e-79 305.0
97 TraesCS5B01G553600 chr6B 90.341 176 16 1 36 210 593497110 593496935 2.200000e-56 230.0
98 TraesCS5B01G553600 chr6B 88.298 188 19 3 36 222 576214180 576214365 3.680000e-54 222.0
99 TraesCS5B01G553600 chr6B 97.619 42 0 1 1 42 11204888 11204848 1.410000e-08 71.3
100 TraesCS5B01G553600 chr5A 95.361 194 5 3 2646 2838 666941647 666941457 3.550000e-79 305.0
101 TraesCS5B01G553600 chr3A 95.361 194 5 3 2646 2838 733099007 733099197 3.550000e-79 305.0
102 TraesCS5B01G553600 chr4B 94.872 195 6 3 2646 2838 610739748 610739940 4.600000e-78 302.0
103 TraesCS5B01G553600 chr4B 89.773 176 17 1 36 210 561036524 561036699 1.020000e-54 224.0
104 TraesCS5B01G553600 chr4B 87.568 185 21 2 40 223 442308127 442307944 2.220000e-51 213.0
105 TraesCS5B01G553600 chr4B 88.068 176 20 1 36 210 91168332 91168157 1.030000e-49 207.0
106 TraesCS5B01G553600 chr4B 88.757 169 18 1 43 210 156440484 156440652 3.710000e-49 206.0
107 TraesCS5B01G553600 chr4B 87.222 180 21 2 41 218 265778237 265778058 1.330000e-48 204.0
108 TraesCS5B01G553600 chr4B 100.000 38 0 0 1 38 393118275 393118312 1.410000e-08 71.3
109 TraesCS5B01G553600 chr4B 97.368 38 1 0 1 38 58596677 58596714 6.570000e-07 65.8
110 TraesCS5B01G553600 chr4B 97.368 38 1 0 1 38 626721939 626721902 6.570000e-07 65.8
111 TraesCS5B01G553600 chr4B 97.368 38 1 0 1 38 628937053 628937016 6.570000e-07 65.8
112 TraesCS5B01G553600 chr4B 97.368 38 1 0 1 38 635682242 635682279 6.570000e-07 65.8
113 TraesCS5B01G553600 chr4B 92.857 42 3 0 1 42 15541124 15541083 8.500000e-06 62.1
114 TraesCS5B01G553600 chr4B 95.000 40 1 1 1 40 656235223 656235261 8.500000e-06 62.1
115 TraesCS5B01G553600 chr6A 89.427 227 20 4 827 1052 16984032 16983809 1.670000e-72 283.0
116 TraesCS5B01G553600 chr6A 87.302 189 22 2 36 223 577296980 577297167 6.160000e-52 215.0
117 TraesCS5B01G553600 chr6A 87.349 166 21 0 40 205 24330696 24330531 1.040000e-44 191.0
118 TraesCS5B01G553600 chr1A 91.237 194 16 1 237 429 569676656 569676463 2.170000e-66 263.0
119 TraesCS5B01G553600 chr1A 91.237 194 16 1 237 429 569727174 569726981 2.170000e-66 263.0
120 TraesCS5B01G553600 chr1A 93.865 163 8 2 828 989 570009039 570009200 7.860000e-61 244.0
121 TraesCS5B01G553600 chr2D 95.092 163 6 2 828 989 476924097 476924258 3.630000e-64 255.0
122 TraesCS5B01G553600 chr2D 94.444 162 9 0 828 989 61251997 61251836 1.690000e-62 250.0
123 TraesCS5B01G553600 chr2D 90.173 173 15 1 40 210 588788868 588789040 1.020000e-54 224.0
124 TraesCS5B01G553600 chr2D 88.333 180 20 1 32 210 368466326 368466147 6.160000e-52 215.0
125 TraesCS5B01G553600 chr1B 91.061 179 12 4 812 989 667064304 667064479 3.660000e-59 239.0
126 TraesCS5B01G553600 chr1B 89.011 182 17 3 36 216 68284744 68284565 3.680000e-54 222.0
127 TraesCS5B01G553600 chr1B 87.831 189 21 2 36 223 677174255 677174442 1.320000e-53 220.0
128 TraesCS5B01G553600 chr1B 95.349 43 0 2 1 42 52342421 52342462 1.830000e-07 67.6
129 TraesCS5B01G553600 chr1B 97.436 39 1 0 1 39 637297478 637297440 1.830000e-07 67.6
130 TraesCS5B01G553600 chr1B 95.122 41 1 1 1 41 25803627 25803666 2.360000e-06 63.9
131 TraesCS5B01G553600 chr3B 88.947 190 17 3 36 223 28570584 28570397 6.120000e-57 231.0
132 TraesCS5B01G553600 chr3B 88.889 189 19 2 36 223 758821499 758821312 6.120000e-57 231.0
133 TraesCS5B01G553600 chr3B 87.574 169 20 1 42 209 6636903 6637071 8.030000e-46 195.0
134 TraesCS5B01G553600 chr3B 100.000 38 0 0 1 38 787438799 787438836 1.410000e-08 71.3
135 TraesCS5B01G553600 chr3B 97.500 40 1 0 1 40 619139677 619139638 5.080000e-08 69.4
136 TraesCS5B01G553600 chr3B 97.436 39 1 0 1 39 37565222 37565260 1.830000e-07 67.6
137 TraesCS5B01G553600 chr7A 100.000 36 0 0 2609 2644 147377144 147377179 1.830000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G553600 chr5B 703553017 703555856 2839 True 5245.000000 5245 100.000000 1 2840 1 chr5B.!!$R2 2839
1 TraesCS5B01G553600 chr5B 699421078 699421667 589 True 905.000000 905 94.416000 239 827 1 chr5B.!!$R1 588
2 TraesCS5B01G553600 chr7D 272589957 272591466 1509 True 2265.000000 2265 93.935000 828 2321 1 chr7D.!!$R1 1493
3 TraesCS5B01G553600 chr7D 56406495 56407850 1355 False 1801.000000 1801 91.189000 1008 2321 1 chr7D.!!$F2 1313
4 TraesCS5B01G553600 chr7D 83328001 83329651 1650 False 852.333333 1943 94.411667 840 2489 3 chr7D.!!$F3 1649
5 TraesCS5B01G553600 chr7B 729351296 729352796 1500 True 2159.000000 2159 92.725000 993 2489 1 chr7B.!!$R4 1496
6 TraesCS5B01G553600 chr1D 470873864 470875211 1347 True 1838.000000 1838 91.765000 1008 2321 1 chr1D.!!$R4 1313
7 TraesCS5B01G553600 chr1D 81232192 81233898 1706 False 1206.500000 2111 93.493000 833 2838 2 chr1D.!!$F3 2005
8 TraesCS5B01G553600 chr6D 254935945 254937438 1493 False 2028.000000 2028 91.333000 828 2321 1 chr6D.!!$F2 1493
9 TraesCS5B01G553600 chr6D 417544427 417545994 1567 True 1024.500000 1803 93.462500 833 2282 2 chr6D.!!$R3 1449
10 TraesCS5B01G553600 chr6D 465023254 465025342 2088 False 277.000000 302 91.462500 828 2838 2 chr6D.!!$F5 2010
11 TraesCS5B01G553600 chr4D 454441378 454442863 1485 False 2010.000000 2010 91.196000 828 2321 1 chr4D.!!$F2 1493
12 TraesCS5B01G553600 chr4D 503629940 503631754 1814 False 259.500000 300 92.632000 821 2838 2 chr4D.!!$F5 2017
13 TraesCS5B01G553600 chrUn 79889144 79890697 1553 False 1075.500000 1929 92.150000 828 2321 2 chrUn.!!$F8 1493
14 TraesCS5B01G553600 chrUn 314982408 314983964 1556 False 1030.500000 1855 90.805000 828 2321 2 chrUn.!!$F9 1493
15 TraesCS5B01G553600 chrUn 315004446 315006001 1555 False 1027.500000 1855 90.498000 828 2321 2 chrUn.!!$F10 1493
16 TraesCS5B01G553600 chrUn 365784850 365786320 1470 True 992.500000 1855 94.703500 914 2321 2 chrUn.!!$R9 1407
17 TraesCS5B01G553600 chr3D 594763585 594764927 1342 True 1921.000000 1921 92.868000 1008 2321 1 chr3D.!!$R4 1313
18 TraesCS5B01G553600 chr3D 549345705 549347037 1332 True 1823.000000 1823 91.685000 1008 2321 1 chr3D.!!$R3 1313
19 TraesCS5B01G553600 chr5D 482932554 482933894 1340 True 1919.000000 1919 92.868000 1008 2321 1 chr5D.!!$R1 1313

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
810 813 0.033796 AGACCCATGTTGCCTCCATG 60.034 55.0 0.0 0.0 39.5 3.66 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2631 3284 0.034896 TTGAAAGACTCCCTCCGTGC 59.965 55.0 0.0 0.0 0.0 5.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 9.981460 ATGTTTCTCATATTAGGTCCTTTTTCT 57.019 29.630 0.00 0.00 34.67 2.52
38 39 8.660295 TTAGGTCCTTTTTCTACTAGTGATGA 57.340 34.615 5.39 0.00 0.00 2.92
39 40 7.176589 AGGTCCTTTTTCTACTAGTGATGAG 57.823 40.000 5.39 0.00 0.00 2.90
40 41 5.813157 GGTCCTTTTTCTACTAGTGATGAGC 59.187 44.000 5.39 0.00 0.00 4.26
41 42 5.813157 GTCCTTTTTCTACTAGTGATGAGCC 59.187 44.000 5.39 0.00 0.00 4.70
42 43 5.721960 TCCTTTTTCTACTAGTGATGAGCCT 59.278 40.000 5.39 0.00 0.00 4.58
43 44 6.895756 TCCTTTTTCTACTAGTGATGAGCCTA 59.104 38.462 5.39 0.00 0.00 3.93
44 45 7.565398 TCCTTTTTCTACTAGTGATGAGCCTAT 59.435 37.037 5.39 0.00 0.00 2.57
45 46 8.861086 CCTTTTTCTACTAGTGATGAGCCTATA 58.139 37.037 5.39 0.00 0.00 1.31
46 47 9.906660 CTTTTTCTACTAGTGATGAGCCTATAG 57.093 37.037 5.39 0.00 0.00 1.31
47 48 8.998277 TTTTCTACTAGTGATGAGCCTATAGT 57.002 34.615 5.39 0.00 0.00 2.12
49 50 9.727859 TTTCTACTAGTGATGAGCCTATAGTAG 57.272 37.037 5.39 9.78 41.76 2.57
50 51 8.667592 TCTACTAGTGATGAGCCTATAGTAGA 57.332 38.462 5.39 13.25 44.50 2.59
51 52 9.102453 TCTACTAGTGATGAGCCTATAGTAGAA 57.898 37.037 14.37 2.96 44.09 2.10
52 53 9.727859 CTACTAGTGATGAGCCTATAGTAGAAA 57.272 37.037 5.39 0.00 42.45 2.52
54 55 9.019656 ACTAGTGATGAGCCTATAGTAGAAATG 57.980 37.037 0.00 0.00 0.00 2.32
55 56 7.238486 AGTGATGAGCCTATAGTAGAAATGG 57.762 40.000 0.00 0.00 0.00 3.16
56 57 7.013220 AGTGATGAGCCTATAGTAGAAATGGA 58.987 38.462 0.00 0.00 0.00 3.41
57 58 7.510685 AGTGATGAGCCTATAGTAGAAATGGAA 59.489 37.037 0.00 0.00 0.00 3.53
58 59 8.150945 GTGATGAGCCTATAGTAGAAATGGAAA 58.849 37.037 0.00 0.00 0.00 3.13
59 60 8.884323 TGATGAGCCTATAGTAGAAATGGAAAT 58.116 33.333 0.00 0.00 0.00 2.17
60 61 9.732130 GATGAGCCTATAGTAGAAATGGAAATT 57.268 33.333 0.00 0.00 0.00 1.82
61 62 9.732130 ATGAGCCTATAGTAGAAATGGAAATTC 57.268 33.333 0.00 0.00 0.00 2.17
62 63 8.157476 TGAGCCTATAGTAGAAATGGAAATTCC 58.843 37.037 4.79 4.79 36.96 3.01
98 99 2.661594 GAAAGTTCCATTTCCACGTGC 58.338 47.619 10.91 0.00 33.85 5.34
99 100 0.591170 AAGTTCCATTTCCACGTGCG 59.409 50.000 10.91 3.66 0.00 5.34
100 101 0.534203 AGTTCCATTTCCACGTGCGT 60.534 50.000 10.91 0.00 0.00 5.24
101 102 0.309612 GTTCCATTTCCACGTGCGTT 59.690 50.000 10.91 0.00 0.00 4.84
102 103 0.589223 TTCCATTTCCACGTGCGTTC 59.411 50.000 10.91 0.00 0.00 3.95
103 104 1.209127 CCATTTCCACGTGCGTTCC 59.791 57.895 10.91 0.00 0.00 3.62
104 105 1.511318 CCATTTCCACGTGCGTTCCA 61.511 55.000 10.91 0.00 0.00 3.53
105 106 0.385473 CATTTCCACGTGCGTTCCAC 60.385 55.000 10.91 0.00 41.15 4.02
106 107 1.512156 ATTTCCACGTGCGTTCCACC 61.512 55.000 10.91 0.00 41.53 4.61
107 108 4.953868 TCCACGTGCGTTCCACCG 62.954 66.667 10.91 0.00 41.53 4.94
109 110 4.953868 CACGTGCGTTCCACCGGA 62.954 66.667 9.46 0.00 41.53 5.14
110 111 4.224274 ACGTGCGTTCCACCGGAA 62.224 61.111 9.46 0.00 41.53 4.30
111 112 2.968156 CGTGCGTTCCACCGGAAA 60.968 61.111 9.46 0.00 43.86 3.13
112 113 2.535788 CGTGCGTTCCACCGGAAAA 61.536 57.895 9.46 0.00 43.86 2.29
113 114 1.009335 GTGCGTTCCACCGGAAAAC 60.009 57.895 9.46 8.39 43.86 2.43
114 115 1.451567 TGCGTTCCACCGGAAAACA 60.452 52.632 9.46 0.00 43.86 2.83
115 116 1.009335 GCGTTCCACCGGAAAACAC 60.009 57.895 9.46 0.00 43.86 3.32
116 117 1.650363 CGTTCCACCGGAAAACACC 59.350 57.895 9.46 0.00 43.86 4.16
117 118 1.096386 CGTTCCACCGGAAAACACCA 61.096 55.000 9.46 0.00 43.86 4.17
118 119 1.324383 GTTCCACCGGAAAACACCAT 58.676 50.000 9.46 0.00 43.86 3.55
119 120 1.684450 GTTCCACCGGAAAACACCATT 59.316 47.619 9.46 0.00 43.86 3.16
120 121 1.611519 TCCACCGGAAAACACCATTC 58.388 50.000 9.46 0.00 0.00 2.67
121 122 1.144093 TCCACCGGAAAACACCATTCT 59.856 47.619 9.46 0.00 0.00 2.40
122 123 1.269448 CCACCGGAAAACACCATTCTG 59.731 52.381 9.46 0.00 33.78 3.02
123 124 1.953686 CACCGGAAAACACCATTCTGT 59.046 47.619 9.46 0.00 32.40 3.41
124 125 2.360801 CACCGGAAAACACCATTCTGTT 59.639 45.455 9.46 0.00 35.83 3.16
125 126 3.028130 ACCGGAAAACACCATTCTGTTT 58.972 40.909 9.46 0.00 44.55 2.83
133 134 6.735678 AAACACCATTCTGTTTTTGTTTCC 57.264 33.333 0.00 0.00 40.72 3.13
134 135 5.413309 ACACCATTCTGTTTTTGTTTCCA 57.587 34.783 0.00 0.00 0.00 3.53
135 136 5.988287 ACACCATTCTGTTTTTGTTTCCAT 58.012 33.333 0.00 0.00 0.00 3.41
136 137 6.413892 ACACCATTCTGTTTTTGTTTCCATT 58.586 32.000 0.00 0.00 0.00 3.16
137 138 6.883756 ACACCATTCTGTTTTTGTTTCCATTT 59.116 30.769 0.00 0.00 0.00 2.32
138 139 7.065683 ACACCATTCTGTTTTTGTTTCCATTTC 59.934 33.333 0.00 0.00 0.00 2.17
139 140 6.542005 ACCATTCTGTTTTTGTTTCCATTTCC 59.458 34.615 0.00 0.00 0.00 3.13
140 141 6.541641 CCATTCTGTTTTTGTTTCCATTTCCA 59.458 34.615 0.00 0.00 0.00 3.53
141 142 7.066766 CCATTCTGTTTTTGTTTCCATTTCCAA 59.933 33.333 0.00 0.00 0.00 3.53
142 143 7.986085 TTCTGTTTTTGTTTCCATTTCCAAA 57.014 28.000 0.00 0.00 0.00 3.28
143 144 8.572855 TTCTGTTTTTGTTTCCATTTCCAAAT 57.427 26.923 0.00 0.00 0.00 2.32
144 145 9.672673 TTCTGTTTTTGTTTCCATTTCCAAATA 57.327 25.926 0.00 0.00 0.00 1.40
145 146 9.672673 TCTGTTTTTGTTTCCATTTCCAAATAA 57.327 25.926 0.00 0.00 0.00 1.40
169 170 6.912203 AAAAATCGTTTCCATTTCCGTTTT 57.088 29.167 0.00 0.00 0.00 2.43
170 171 5.898630 AAATCGTTTCCATTTCCGTTTTG 57.101 34.783 0.00 0.00 0.00 2.44
171 172 2.733517 TCGTTTCCATTTCCGTTTTGC 58.266 42.857 0.00 0.00 0.00 3.68
172 173 2.099263 TCGTTTCCATTTCCGTTTTGCA 59.901 40.909 0.00 0.00 0.00 4.08
173 174 2.860735 CGTTTCCATTTCCGTTTTGCAA 59.139 40.909 0.00 0.00 0.00 4.08
174 175 3.307242 CGTTTCCATTTCCGTTTTGCAAA 59.693 39.130 8.05 8.05 0.00 3.68
175 176 4.025313 CGTTTCCATTTCCGTTTTGCAAAT 60.025 37.500 13.65 0.00 0.00 2.32
176 177 5.503194 CGTTTCCATTTCCGTTTTGCAAATT 60.503 36.000 13.65 0.00 0.00 1.82
177 178 6.261859 GTTTCCATTTCCGTTTTGCAAATTT 58.738 32.000 13.65 0.00 0.00 1.82
178 179 5.665381 TCCATTTCCGTTTTGCAAATTTC 57.335 34.783 13.65 6.13 0.00 2.17
179 180 4.513318 TCCATTTCCGTTTTGCAAATTTCC 59.487 37.500 13.65 0.92 0.00 3.13
180 181 4.274459 CCATTTCCGTTTTGCAAATTTCCA 59.726 37.500 13.65 0.00 0.00 3.53
181 182 5.048852 CCATTTCCGTTTTGCAAATTTCCAT 60.049 36.000 13.65 0.00 0.00 3.41
182 183 6.437094 CATTTCCGTTTTGCAAATTTCCATT 58.563 32.000 13.65 0.00 0.00 3.16
183 184 6.442513 TTTCCGTTTTGCAAATTTCCATTT 57.557 29.167 13.65 0.00 32.36 2.32
184 185 5.665381 TCCGTTTTGCAAATTTCCATTTC 57.335 34.783 13.65 0.00 29.41 2.17
185 186 4.513318 TCCGTTTTGCAAATTTCCATTTCC 59.487 37.500 13.65 0.00 29.41 3.13
186 187 4.453339 CGTTTTGCAAATTTCCATTTCCG 58.547 39.130 13.65 0.00 29.41 4.30
187 188 4.218265 GTTTTGCAAATTTCCATTTCCGC 58.782 39.130 13.65 0.00 29.41 5.54
188 189 3.399440 TTGCAAATTTCCATTTCCGCT 57.601 38.095 0.00 0.00 29.41 5.52
189 190 3.399440 TGCAAATTTCCATTTCCGCTT 57.601 38.095 0.00 0.00 29.41 4.68
190 191 3.737850 TGCAAATTTCCATTTCCGCTTT 58.262 36.364 0.00 0.00 29.41 3.51
191 192 3.745458 TGCAAATTTCCATTTCCGCTTTC 59.255 39.130 0.00 0.00 29.41 2.62
192 193 3.745458 GCAAATTTCCATTTCCGCTTTCA 59.255 39.130 0.00 0.00 29.41 2.69
193 194 4.392754 GCAAATTTCCATTTCCGCTTTCAT 59.607 37.500 0.00 0.00 29.41 2.57
194 195 5.580297 GCAAATTTCCATTTCCGCTTTCATA 59.420 36.000 0.00 0.00 29.41 2.15
195 196 6.258507 GCAAATTTCCATTTCCGCTTTCATAT 59.741 34.615 0.00 0.00 29.41 1.78
196 197 7.201635 GCAAATTTCCATTTCCGCTTTCATATT 60.202 33.333 0.00 0.00 29.41 1.28
197 198 8.667463 CAAATTTCCATTTCCGCTTTCATATTT 58.333 29.630 0.00 0.00 29.41 1.40
198 199 8.424274 AATTTCCATTTCCGCTTTCATATTTC 57.576 30.769 0.00 0.00 0.00 2.17
199 200 5.514274 TCCATTTCCGCTTTCATATTTCC 57.486 39.130 0.00 0.00 0.00 3.13
200 201 5.200483 TCCATTTCCGCTTTCATATTTCCT 58.800 37.500 0.00 0.00 0.00 3.36
201 202 5.299279 TCCATTTCCGCTTTCATATTTCCTC 59.701 40.000 0.00 0.00 0.00 3.71
202 203 5.300286 CCATTTCCGCTTTCATATTTCCTCT 59.700 40.000 0.00 0.00 0.00 3.69
203 204 6.433766 CATTTCCGCTTTCATATTTCCTCTC 58.566 40.000 0.00 0.00 0.00 3.20
204 205 4.073293 TCCGCTTTCATATTTCCTCTCC 57.927 45.455 0.00 0.00 0.00 3.71
205 206 2.802816 CCGCTTTCATATTTCCTCTCCG 59.197 50.000 0.00 0.00 0.00 4.63
206 207 3.458189 CGCTTTCATATTTCCTCTCCGT 58.542 45.455 0.00 0.00 0.00 4.69
207 208 3.871594 CGCTTTCATATTTCCTCTCCGTT 59.128 43.478 0.00 0.00 0.00 4.44
208 209 4.332819 CGCTTTCATATTTCCTCTCCGTTT 59.667 41.667 0.00 0.00 0.00 3.60
209 210 5.502544 CGCTTTCATATTTCCTCTCCGTTTC 60.503 44.000 0.00 0.00 0.00 2.78
210 211 5.354234 GCTTTCATATTTCCTCTCCGTTTCA 59.646 40.000 0.00 0.00 0.00 2.69
211 212 6.128007 GCTTTCATATTTCCTCTCCGTTTCAA 60.128 38.462 0.00 0.00 0.00 2.69
212 213 6.737254 TTCATATTTCCTCTCCGTTTCAAC 57.263 37.500 0.00 0.00 0.00 3.18
213 214 6.049955 TCATATTTCCTCTCCGTTTCAACT 57.950 37.500 0.00 0.00 0.00 3.16
214 215 6.472887 TCATATTTCCTCTCCGTTTCAACTT 58.527 36.000 0.00 0.00 0.00 2.66
215 216 6.940298 TCATATTTCCTCTCCGTTTCAACTTT 59.060 34.615 0.00 0.00 0.00 2.66
216 217 5.690997 ATTTCCTCTCCGTTTCAACTTTC 57.309 39.130 0.00 0.00 0.00 2.62
217 218 3.121738 TCCTCTCCGTTTCAACTTTCC 57.878 47.619 0.00 0.00 0.00 3.13
218 219 2.436542 TCCTCTCCGTTTCAACTTTCCA 59.563 45.455 0.00 0.00 0.00 3.53
219 220 2.548480 CCTCTCCGTTTCAACTTTCCAC 59.452 50.000 0.00 0.00 0.00 4.02
220 221 3.467803 CTCTCCGTTTCAACTTTCCACT 58.532 45.455 0.00 0.00 0.00 4.00
221 222 3.463944 TCTCCGTTTCAACTTTCCACTC 58.536 45.455 0.00 0.00 0.00 3.51
222 223 2.548480 CTCCGTTTCAACTTTCCACTCC 59.452 50.000 0.00 0.00 0.00 3.85
223 224 2.092861 TCCGTTTCAACTTTCCACTCCA 60.093 45.455 0.00 0.00 0.00 3.86
224 225 2.884639 CCGTTTCAACTTTCCACTCCAT 59.115 45.455 0.00 0.00 0.00 3.41
225 226 3.317993 CCGTTTCAACTTTCCACTCCATT 59.682 43.478 0.00 0.00 0.00 3.16
226 227 4.202111 CCGTTTCAACTTTCCACTCCATTT 60.202 41.667 0.00 0.00 0.00 2.32
227 228 5.348164 CGTTTCAACTTTCCACTCCATTTT 58.652 37.500 0.00 0.00 0.00 1.82
228 229 5.458779 CGTTTCAACTTTCCACTCCATTTTC 59.541 40.000 0.00 0.00 0.00 2.29
229 230 6.337356 GTTTCAACTTTCCACTCCATTTTCA 58.663 36.000 0.00 0.00 0.00 2.69
230 231 6.729690 TTCAACTTTCCACTCCATTTTCAT 57.270 33.333 0.00 0.00 0.00 2.57
231 232 6.331369 TCAACTTTCCACTCCATTTTCATC 57.669 37.500 0.00 0.00 0.00 2.92
232 233 5.243730 TCAACTTTCCACTCCATTTTCATCC 59.756 40.000 0.00 0.00 0.00 3.51
233 234 4.089361 ACTTTCCACTCCATTTTCATCCC 58.911 43.478 0.00 0.00 0.00 3.85
234 235 4.202716 ACTTTCCACTCCATTTTCATCCCT 60.203 41.667 0.00 0.00 0.00 4.20
235 236 5.015178 ACTTTCCACTCCATTTTCATCCCTA 59.985 40.000 0.00 0.00 0.00 3.53
236 237 5.732331 TTCCACTCCATTTTCATCCCTAT 57.268 39.130 0.00 0.00 0.00 2.57
237 238 6.840090 TTCCACTCCATTTTCATCCCTATA 57.160 37.500 0.00 0.00 0.00 1.31
244 245 6.170506 TCCATTTTCATCCCTATATGTACGC 58.829 40.000 0.00 0.00 0.00 4.42
339 340 2.295885 CTTGGGTTCAGCAGATCCATC 58.704 52.381 8.33 0.00 35.67 3.51
344 345 3.344215 CAGCAGATCCATCCGCGC 61.344 66.667 0.00 0.00 35.43 6.86
382 383 6.162777 TCAACATACTCAACATTGTCGATGA 58.837 36.000 7.09 0.00 39.15 2.92
429 430 5.427378 TGCATTAACAGCTCTATGCACTAA 58.573 37.500 14.23 0.00 45.92 2.24
450 451 9.636879 CACTAATGGACATGATATCTTACTGAG 57.363 37.037 0.00 0.00 0.00 3.35
452 453 7.862274 AATGGACATGATATCTTACTGAGGA 57.138 36.000 0.00 0.00 0.00 3.71
522 524 4.063689 AGAGATTGGATCAAAGCTATGCG 58.936 43.478 0.00 0.00 0.00 4.73
556 559 5.763204 TGTAGTTTATAATGGCAGGCTAAGC 59.237 40.000 0.00 0.00 0.00 3.09
623 626 8.612619 TGTGAGAAACTGAACATTCTTTAGAAC 58.387 33.333 0.00 0.00 36.08 3.01
648 651 0.538057 CCAGTCACCCACTTGTGCAT 60.538 55.000 0.00 0.00 36.17 3.96
650 653 0.538057 AGTCACCCACTTGTGCATGG 60.538 55.000 0.00 0.00 36.17 3.66
661 664 2.992689 TGCATGGCAAGGCACAGG 60.993 61.111 12.45 0.00 38.39 4.00
682 685 3.748568 GGGAAACTGTCAAGCTTAGTGAG 59.251 47.826 0.00 0.00 0.00 3.51
697 700 8.316640 AGCTTAGTGAGAAAAGACAACAATAG 57.683 34.615 0.00 0.00 0.00 1.73
726 729 0.734889 ACAAGCAAGCATACATCGCC 59.265 50.000 0.00 0.00 0.00 5.54
752 755 1.926510 GAAACAAACAAGCACCACTGC 59.073 47.619 0.00 0.00 44.63 4.40
763 766 2.113139 CCACTGCCACGGAAAGGT 59.887 61.111 0.00 0.00 0.00 3.50
767 770 0.601841 ACTGCCACGGAAAGGTTACG 60.602 55.000 0.00 0.00 0.00 3.18
783 786 7.739498 AAGGTTACGAAATAGTGACACAATT 57.261 32.000 8.59 0.00 32.99 2.32
798 801 4.410099 ACACAATTCATCACAAGACCCAT 58.590 39.130 0.00 0.00 0.00 4.00
799 802 4.219070 ACACAATTCATCACAAGACCCATG 59.781 41.667 0.00 0.00 0.00 3.66
800 803 4.219070 CACAATTCATCACAAGACCCATGT 59.781 41.667 0.00 0.00 0.00 3.21
801 804 4.834496 ACAATTCATCACAAGACCCATGTT 59.166 37.500 0.00 0.00 0.00 2.71
802 805 5.165676 CAATTCATCACAAGACCCATGTTG 58.834 41.667 0.00 0.00 35.23 3.33
803 806 2.161855 TCATCACAAGACCCATGTTGC 58.838 47.619 0.00 0.00 32.28 4.17
804 807 1.203052 CATCACAAGACCCATGTTGCC 59.797 52.381 0.00 0.00 32.28 4.52
805 808 0.478072 TCACAAGACCCATGTTGCCT 59.522 50.000 0.00 0.00 32.28 4.75
806 809 0.883833 CACAAGACCCATGTTGCCTC 59.116 55.000 0.00 0.00 32.28 4.70
807 810 0.251341 ACAAGACCCATGTTGCCTCC 60.251 55.000 0.00 0.00 32.28 4.30
808 811 0.251297 CAAGACCCATGTTGCCTCCA 60.251 55.000 0.00 0.00 0.00 3.86
809 812 0.706433 AAGACCCATGTTGCCTCCAT 59.294 50.000 0.00 0.00 0.00 3.41
810 813 0.033796 AGACCCATGTTGCCTCCATG 60.034 55.000 0.00 0.00 39.50 3.66
811 814 0.323725 GACCCATGTTGCCTCCATGT 60.324 55.000 6.60 0.00 38.39 3.21
812 815 0.114954 ACCCATGTTGCCTCCATGTT 59.885 50.000 6.60 0.00 38.39 2.71
813 816 1.269012 CCCATGTTGCCTCCATGTTT 58.731 50.000 6.60 0.00 38.39 2.83
814 817 1.066716 CCCATGTTGCCTCCATGTTTG 60.067 52.381 6.60 0.00 38.39 2.93
815 818 1.673626 CCATGTTGCCTCCATGTTTGC 60.674 52.381 6.60 0.00 38.39 3.68
816 819 1.274167 CATGTTGCCTCCATGTTTGCT 59.726 47.619 0.00 0.00 35.94 3.91
817 820 2.284754 TGTTGCCTCCATGTTTGCTA 57.715 45.000 0.00 0.00 0.00 3.49
818 821 2.806434 TGTTGCCTCCATGTTTGCTAT 58.194 42.857 0.00 0.00 0.00 2.97
819 822 3.164268 TGTTGCCTCCATGTTTGCTATT 58.836 40.909 0.00 0.00 0.00 1.73
820 823 3.577848 TGTTGCCTCCATGTTTGCTATTT 59.422 39.130 0.00 0.00 0.00 1.40
821 824 4.040217 TGTTGCCTCCATGTTTGCTATTTT 59.960 37.500 0.00 0.00 0.00 1.82
822 825 4.888326 TGCCTCCATGTTTGCTATTTTT 57.112 36.364 0.00 0.00 0.00 1.94
823 826 4.819769 TGCCTCCATGTTTGCTATTTTTC 58.180 39.130 0.00 0.00 0.00 2.29
824 827 4.527816 TGCCTCCATGTTTGCTATTTTTCT 59.472 37.500 0.00 0.00 0.00 2.52
825 828 5.011943 TGCCTCCATGTTTGCTATTTTTCTT 59.988 36.000 0.00 0.00 0.00 2.52
826 829 6.210385 TGCCTCCATGTTTGCTATTTTTCTTA 59.790 34.615 0.00 0.00 0.00 2.10
827 830 6.753744 GCCTCCATGTTTGCTATTTTTCTTAG 59.246 38.462 0.00 0.00 0.00 2.18
828 831 7.260603 CCTCCATGTTTGCTATTTTTCTTAGG 58.739 38.462 0.00 0.00 0.00 2.69
829 832 7.169158 TCCATGTTTGCTATTTTTCTTAGGG 57.831 36.000 0.00 0.00 0.00 3.53
830 833 6.951198 TCCATGTTTGCTATTTTTCTTAGGGA 59.049 34.615 0.00 0.00 0.00 4.20
878 881 4.511527 AGTTGAATTGTCTCTCATGCGAT 58.488 39.130 0.00 0.00 0.00 4.58
896 899 3.615496 GCGATGTCGTTGGTTGTAATAGT 59.385 43.478 4.20 0.00 42.22 2.12
912 915 7.776933 TGTAATAGTTCTCATGCAACATCTC 57.223 36.000 9.31 0.00 0.00 2.75
1005 1088 0.688487 AGCCCCTACGTAACAAAGCA 59.312 50.000 0.00 0.00 0.00 3.91
1006 1089 1.072648 AGCCCCTACGTAACAAAGCAA 59.927 47.619 0.00 0.00 0.00 3.91
1013 1096 2.858745 ACGTAACAAAGCAAGACCCAT 58.141 42.857 0.00 0.00 0.00 4.00
1044 1185 5.104485 GGACCCACTAACTTATCCAACTCAT 60.104 44.000 0.00 0.00 0.00 2.90
1110 1308 2.107141 GCGACCTTCCCATCCTCG 59.893 66.667 0.00 0.00 0.00 4.63
1113 1312 2.285368 ACCTTCCCATCCTCGCCA 60.285 61.111 0.00 0.00 0.00 5.69
1114 1313 2.190578 CCTTCCCATCCTCGCCAC 59.809 66.667 0.00 0.00 0.00 5.01
1261 1769 1.679977 CCATGACAAGGTGCCCTGG 60.680 63.158 0.00 0.00 32.13 4.45
1343 1851 0.808755 GGCGGGAATTCGTGAAATGT 59.191 50.000 0.00 0.00 0.00 2.71
1458 1974 4.523083 TGGGATTTAGGGTTCATCTTTCG 58.477 43.478 0.00 0.00 0.00 3.46
1472 1988 7.486232 GGTTCATCTTTCGGATTTCAGAAATTC 59.514 37.037 9.84 6.96 38.84 2.17
1586 2121 1.001393 GAAGTTTGGATCGGGCCCA 60.001 57.895 24.92 9.77 0.00 5.36
2041 2684 5.541258 ACATATCCAGGCCCATTGATAAT 57.459 39.130 0.00 0.00 0.00 1.28
2051 2695 6.016276 CAGGCCCATTGATAATAAAGGTGTAC 60.016 42.308 0.00 0.00 0.00 2.90
2138 2790 5.911752 TCACAAATTTTAAGCTTCCTGCAA 58.088 33.333 0.00 0.00 45.94 4.08
2220 2873 1.760875 GTCCGATGCTAGGGTCCCA 60.761 63.158 11.55 0.00 0.00 4.37
2250 2903 3.067040 TCGGCTAAAACAAAAGGTTGGTC 59.933 43.478 0.00 0.00 40.35 4.02
2263 2916 4.057063 AGGTTGGTCCTAGTTAGCAGTA 57.943 45.455 0.00 0.00 46.10 2.74
2279 2932 9.280174 AGTTAGCAGTATAACTTGCAGTTTTTA 57.720 29.630 6.82 0.00 42.05 1.52
2330 2983 5.441718 TCTAGTTTACTTCCTCCGTCCTA 57.558 43.478 0.00 0.00 0.00 2.94
2359 3012 7.009907 GTGTTGGGAAGTGTAAGTCGTAATATC 59.990 40.741 0.00 0.00 0.00 1.63
2379 3032 2.030363 TCCATTAACTGCCGCTTGTTTG 60.030 45.455 7.44 2.60 0.00 2.93
2398 3051 3.342377 TGCTCCGGTGATTAATTGTGA 57.658 42.857 7.92 0.00 0.00 3.58
2404 3057 3.490761 CCGGTGATTAATTGTGAATGGCC 60.491 47.826 0.00 0.00 0.00 5.36
2504 3157 3.767816 ACGCGAGTGTGGGAGTAA 58.232 55.556 15.93 0.00 46.97 2.24
2505 3158 2.273908 ACGCGAGTGTGGGAGTAAT 58.726 52.632 15.93 0.00 46.97 1.89
2506 3159 0.606604 ACGCGAGTGTGGGAGTAATT 59.393 50.000 15.93 0.00 46.97 1.40
2507 3160 1.278238 CGCGAGTGTGGGAGTAATTC 58.722 55.000 0.00 0.00 0.00 2.17
2508 3161 1.653151 GCGAGTGTGGGAGTAATTCC 58.347 55.000 0.00 0.00 46.00 3.01
2509 3162 1.207329 GCGAGTGTGGGAGTAATTCCT 59.793 52.381 0.00 0.00 45.98 3.36
2510 3163 2.893637 CGAGTGTGGGAGTAATTCCTG 58.106 52.381 0.00 0.00 45.98 3.86
2511 3164 2.418746 CGAGTGTGGGAGTAATTCCTGG 60.419 54.545 0.00 0.00 45.98 4.45
2512 3165 1.282157 AGTGTGGGAGTAATTCCTGGC 59.718 52.381 0.00 0.00 45.98 4.85
2513 3166 1.004277 GTGTGGGAGTAATTCCTGGCA 59.996 52.381 0.00 0.00 45.98 4.92
2514 3167 1.922447 TGTGGGAGTAATTCCTGGCAT 59.078 47.619 0.00 0.00 45.98 4.40
2515 3168 2.301346 GTGGGAGTAATTCCTGGCATG 58.699 52.381 0.00 0.00 45.98 4.06
2516 3169 1.215173 TGGGAGTAATTCCTGGCATGG 59.785 52.381 0.00 0.00 45.98 3.66
2517 3170 1.479389 GGGAGTAATTCCTGGCATGGG 60.479 57.143 0.00 0.00 45.98 4.00
2518 3171 1.215423 GGAGTAATTCCTGGCATGGGT 59.785 52.381 0.00 0.00 43.16 4.51
2519 3172 2.576615 GAGTAATTCCTGGCATGGGTC 58.423 52.381 0.00 0.00 0.00 4.46
2520 3173 1.922447 AGTAATTCCTGGCATGGGTCA 59.078 47.619 0.00 0.00 0.00 4.02
2521 3174 2.092212 AGTAATTCCTGGCATGGGTCAG 60.092 50.000 0.00 0.00 46.46 3.51
2522 3175 0.685458 AATTCCTGGCATGGGTCAGC 60.685 55.000 0.00 0.00 45.53 4.26
2523 3176 2.578586 ATTCCTGGCATGGGTCAGCC 62.579 60.000 0.00 0.00 45.53 4.85
2527 3180 2.361104 GGCATGGGTCAGCCGAAA 60.361 61.111 0.00 0.00 41.70 3.46
2528 3181 2.700773 GGCATGGGTCAGCCGAAAC 61.701 63.158 0.00 0.00 41.70 2.78
2529 3182 3.039202 GCATGGGTCAGCCGAAACG 62.039 63.158 0.00 0.00 34.97 3.60
2539 3192 3.098555 CCGAAACGGCCTGTATGC 58.901 61.111 0.00 0.00 41.17 3.14
2540 3193 1.449601 CCGAAACGGCCTGTATGCT 60.450 57.895 0.00 0.00 41.17 3.79
2541 3194 0.179094 CCGAAACGGCCTGTATGCTA 60.179 55.000 0.00 0.00 41.17 3.49
2542 3195 0.928229 CGAAACGGCCTGTATGCTAC 59.072 55.000 0.00 0.00 0.00 3.58
2543 3196 1.470979 CGAAACGGCCTGTATGCTACT 60.471 52.381 0.00 0.00 0.00 2.57
2544 3197 2.223641 CGAAACGGCCTGTATGCTACTA 60.224 50.000 0.00 0.00 0.00 1.82
2545 3198 3.381949 GAAACGGCCTGTATGCTACTAG 58.618 50.000 0.00 0.00 0.00 2.57
2546 3199 1.329256 ACGGCCTGTATGCTACTAGG 58.671 55.000 0.00 0.00 33.16 3.02
2547 3200 1.133575 ACGGCCTGTATGCTACTAGGA 60.134 52.381 0.00 0.00 32.32 2.94
2548 3201 2.171840 CGGCCTGTATGCTACTAGGAT 58.828 52.381 0.00 0.00 32.32 3.24
2549 3202 2.563179 CGGCCTGTATGCTACTAGGATT 59.437 50.000 0.00 0.00 32.32 3.01
2550 3203 3.006967 CGGCCTGTATGCTACTAGGATTT 59.993 47.826 0.00 0.00 32.32 2.17
2551 3204 4.570930 GGCCTGTATGCTACTAGGATTTC 58.429 47.826 0.00 0.00 32.32 2.17
2552 3205 4.284746 GGCCTGTATGCTACTAGGATTTCT 59.715 45.833 0.00 0.00 32.32 2.52
2553 3206 5.221742 GGCCTGTATGCTACTAGGATTTCTT 60.222 44.000 0.00 0.00 32.32 2.52
2554 3207 5.929415 GCCTGTATGCTACTAGGATTTCTTC 59.071 44.000 0.00 0.00 32.32 2.87
2555 3208 6.459923 CCTGTATGCTACTAGGATTTCTTCC 58.540 44.000 0.00 0.00 45.85 3.46
2556 3209 6.420913 TGTATGCTACTAGGATTTCTTCCC 57.579 41.667 0.00 0.00 46.81 3.97
2557 3210 4.608948 ATGCTACTAGGATTTCTTCCCG 57.391 45.455 0.00 0.00 46.81 5.14
2558 3211 2.698797 TGCTACTAGGATTTCTTCCCGG 59.301 50.000 0.00 0.00 46.81 5.73
2559 3212 2.699321 GCTACTAGGATTTCTTCCCGGT 59.301 50.000 0.00 0.00 46.81 5.28
2560 3213 3.134262 GCTACTAGGATTTCTTCCCGGTT 59.866 47.826 0.00 0.00 46.81 4.44
2561 3214 4.383880 GCTACTAGGATTTCTTCCCGGTTT 60.384 45.833 0.00 0.00 46.81 3.27
2562 3215 3.951663 ACTAGGATTTCTTCCCGGTTTG 58.048 45.455 0.00 0.00 46.81 2.93
2563 3216 3.585732 ACTAGGATTTCTTCCCGGTTTGA 59.414 43.478 0.00 0.00 46.81 2.69
2564 3217 3.518992 AGGATTTCTTCCCGGTTTGAA 57.481 42.857 0.00 0.00 46.81 2.69
2565 3218 3.839778 AGGATTTCTTCCCGGTTTGAAA 58.160 40.909 12.96 12.96 46.81 2.69
2566 3219 4.219919 AGGATTTCTTCCCGGTTTGAAAA 58.780 39.130 14.08 3.69 46.81 2.29
2567 3220 4.651962 AGGATTTCTTCCCGGTTTGAAAAA 59.348 37.500 14.08 8.45 46.81 1.94
2568 3221 5.306937 AGGATTTCTTCCCGGTTTGAAAAAT 59.693 36.000 14.08 11.54 46.81 1.82
2569 3222 5.995282 GGATTTCTTCCCGGTTTGAAAAATT 59.005 36.000 14.08 2.36 38.75 1.82
2570 3223 6.485313 GGATTTCTTCCCGGTTTGAAAAATTT 59.515 34.615 14.08 0.00 38.75 1.82
2571 3224 6.670077 TTTCTTCCCGGTTTGAAAAATTTG 57.330 33.333 0.00 0.00 0.00 2.32
2572 3225 4.123506 TCTTCCCGGTTTGAAAAATTTGC 58.876 39.130 0.00 0.00 0.00 3.68
2573 3226 3.543680 TCCCGGTTTGAAAAATTTGCA 57.456 38.095 0.00 0.00 0.00 4.08
2574 3227 3.198872 TCCCGGTTTGAAAAATTTGCAC 58.801 40.909 0.00 0.00 0.00 4.57
2575 3228 2.033322 CCCGGTTTGAAAAATTTGCACG 60.033 45.455 0.00 0.00 0.00 5.34
2576 3229 2.605366 CCGGTTTGAAAAATTTGCACGT 59.395 40.909 0.00 0.00 0.00 4.49
2577 3230 3.302156 CCGGTTTGAAAAATTTGCACGTC 60.302 43.478 0.00 0.00 0.00 4.34
2578 3231 3.302156 CGGTTTGAAAAATTTGCACGTCC 60.302 43.478 0.00 0.00 0.00 4.79
2579 3232 3.619038 GGTTTGAAAAATTTGCACGTCCA 59.381 39.130 0.00 0.00 0.00 4.02
2580 3233 4.093556 GGTTTGAAAAATTTGCACGTCCAA 59.906 37.500 0.00 0.00 0.00 3.53
2581 3234 5.220758 GGTTTGAAAAATTTGCACGTCCAAT 60.221 36.000 0.00 0.00 0.00 3.16
2582 3235 5.649602 TTGAAAAATTTGCACGTCCAATC 57.350 34.783 0.00 0.00 0.00 2.67
2583 3236 4.686972 TGAAAAATTTGCACGTCCAATCA 58.313 34.783 0.00 0.00 0.00 2.57
2584 3237 4.744137 TGAAAAATTTGCACGTCCAATCAG 59.256 37.500 0.00 0.00 0.00 2.90
2585 3238 3.302365 AAATTTGCACGTCCAATCAGG 57.698 42.857 0.00 0.00 39.47 3.86
2586 3239 1.909700 ATTTGCACGTCCAATCAGGT 58.090 45.000 0.00 0.00 39.02 4.00
2587 3240 1.686355 TTTGCACGTCCAATCAGGTT 58.314 45.000 0.00 0.00 39.02 3.50
2588 3241 0.950836 TTGCACGTCCAATCAGGTTG 59.049 50.000 0.00 0.00 39.02 3.77
2589 3242 1.210155 GCACGTCCAATCAGGTTGC 59.790 57.895 0.00 0.00 39.02 4.17
2590 3243 1.514678 GCACGTCCAATCAGGTTGCA 61.515 55.000 0.00 0.00 38.10 4.08
2591 3244 0.238289 CACGTCCAATCAGGTTGCAC 59.762 55.000 0.00 0.00 39.02 4.57
2592 3245 0.889186 ACGTCCAATCAGGTTGCACC 60.889 55.000 0.00 0.00 38.99 5.01
2606 3259 2.205022 TGCACCTAAATTGCAGAGCT 57.795 45.000 0.00 0.00 45.06 4.09
2607 3260 2.517959 TGCACCTAAATTGCAGAGCTT 58.482 42.857 0.00 0.00 45.06 3.74
2608 3261 2.892852 TGCACCTAAATTGCAGAGCTTT 59.107 40.909 0.00 0.00 45.06 3.51
2609 3262 3.321682 TGCACCTAAATTGCAGAGCTTTT 59.678 39.130 0.00 0.00 45.06 2.27
2610 3263 4.202243 TGCACCTAAATTGCAGAGCTTTTT 60.202 37.500 0.00 0.00 45.06 1.94
2611 3264 4.386954 GCACCTAAATTGCAGAGCTTTTTC 59.613 41.667 0.00 0.00 39.93 2.29
2612 3265 5.776744 CACCTAAATTGCAGAGCTTTTTCT 58.223 37.500 0.00 0.00 0.00 2.52
2613 3266 6.218746 CACCTAAATTGCAGAGCTTTTTCTT 58.781 36.000 0.00 0.00 0.00 2.52
2614 3267 7.370383 CACCTAAATTGCAGAGCTTTTTCTTA 58.630 34.615 0.00 0.00 0.00 2.10
2615 3268 7.540055 CACCTAAATTGCAGAGCTTTTTCTTAG 59.460 37.037 0.00 0.00 0.00 2.18
2616 3269 7.031975 CCTAAATTGCAGAGCTTTTTCTTAGG 58.968 38.462 0.00 0.00 0.00 2.69
2617 3270 6.410942 AAATTGCAGAGCTTTTTCTTAGGT 57.589 33.333 0.00 0.00 0.00 3.08
2618 3271 4.836125 TTGCAGAGCTTTTTCTTAGGTG 57.164 40.909 0.00 0.00 0.00 4.00
2619 3272 2.554032 TGCAGAGCTTTTTCTTAGGTGC 59.446 45.455 0.00 0.00 0.00 5.01
2620 3273 2.095008 GCAGAGCTTTTTCTTAGGTGCC 60.095 50.000 0.00 0.00 0.00 5.01
2621 3274 2.489722 CAGAGCTTTTTCTTAGGTGCCC 59.510 50.000 0.00 0.00 0.00 5.36
2622 3275 2.376855 AGAGCTTTTTCTTAGGTGCCCT 59.623 45.455 0.00 0.00 37.71 5.19
2623 3276 3.587506 AGAGCTTTTTCTTAGGTGCCCTA 59.412 43.478 0.00 0.00 34.61 3.53
2624 3277 4.228438 AGAGCTTTTTCTTAGGTGCCCTAT 59.772 41.667 2.26 0.00 35.87 2.57
2625 3278 4.273318 AGCTTTTTCTTAGGTGCCCTATG 58.727 43.478 2.26 5.18 35.87 2.23
2626 3279 3.181486 GCTTTTTCTTAGGTGCCCTATGC 60.181 47.826 2.26 0.00 35.87 3.14
2642 3295 4.767255 GCACCTGCACGGAGGGAG 62.767 72.222 9.59 2.53 41.59 4.30
2643 3296 3.314331 CACCTGCACGGAGGGAGT 61.314 66.667 9.59 0.00 37.45 3.85
2644 3297 2.997897 ACCTGCACGGAGGGAGTC 60.998 66.667 9.59 0.00 37.45 3.36
2645 3298 2.681778 CCTGCACGGAGGGAGTCT 60.682 66.667 0.00 0.00 33.16 3.24
2646 3299 2.286523 CCTGCACGGAGGGAGTCTT 61.287 63.158 0.00 0.00 33.16 3.01
2647 3300 1.674057 CTGCACGGAGGGAGTCTTT 59.326 57.895 0.00 0.00 0.00 2.52
2648 3301 0.390472 CTGCACGGAGGGAGTCTTTC 60.390 60.000 0.00 0.00 0.00 2.62
2671 3325 8.964476 TTCAACCAAGCACCATTTTTATTTTA 57.036 26.923 0.00 0.00 0.00 1.52
2701 3355 7.215789 TGATTTGTGCTATGGTGTTTTCAAAT 58.784 30.769 0.00 0.00 37.10 2.32
2722 3377 8.024285 TCAAATTTTTACTCGTGTGTTTCAACT 58.976 29.630 0.00 0.00 0.00 3.16
2770 3425 3.788227 AAAAGACATCTAGTGTGCCCA 57.212 42.857 3.17 0.00 42.36 5.36
2791 3446 5.305644 CCCATAGTAGCATCTCCTTACAACT 59.694 44.000 0.00 0.00 0.00 3.16
2792 3447 6.183361 CCCATAGTAGCATCTCCTTACAACTT 60.183 42.308 0.00 0.00 0.00 2.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 9.981460 AGAAAAAGGACCTAATATGAGAAACAT 57.019 29.630 0.00 0.00 42.39 2.71
12 13 9.268282 TCATCACTAGTAGAAAAAGGACCTAAT 57.732 33.333 3.59 0.00 0.00 1.73
13 14 8.660295 TCATCACTAGTAGAAAAAGGACCTAA 57.340 34.615 3.59 0.00 0.00 2.69
14 15 7.147880 GCTCATCACTAGTAGAAAAAGGACCTA 60.148 40.741 3.59 0.00 0.00 3.08
15 16 6.351456 GCTCATCACTAGTAGAAAAAGGACCT 60.351 42.308 3.59 0.00 0.00 3.85
16 17 5.813157 GCTCATCACTAGTAGAAAAAGGACC 59.187 44.000 3.59 0.00 0.00 4.46
17 18 5.813157 GGCTCATCACTAGTAGAAAAAGGAC 59.187 44.000 3.59 0.00 0.00 3.85
18 19 5.721960 AGGCTCATCACTAGTAGAAAAAGGA 59.278 40.000 3.59 0.00 0.00 3.36
19 20 5.983540 AGGCTCATCACTAGTAGAAAAAGG 58.016 41.667 3.59 0.00 0.00 3.11
20 21 9.906660 CTATAGGCTCATCACTAGTAGAAAAAG 57.093 37.037 3.59 0.00 0.00 2.27
21 22 9.422681 ACTATAGGCTCATCACTAGTAGAAAAA 57.577 33.333 3.59 0.00 0.00 1.94
22 23 8.998277 ACTATAGGCTCATCACTAGTAGAAAA 57.002 34.615 3.59 0.00 0.00 2.29
23 24 9.727859 CTACTATAGGCTCATCACTAGTAGAAA 57.272 37.037 3.59 0.00 40.06 2.52
24 25 9.102453 TCTACTATAGGCTCATCACTAGTAGAA 57.898 37.037 3.59 0.00 41.91 2.10
25 26 8.667592 TCTACTATAGGCTCATCACTAGTAGA 57.332 38.462 3.59 11.33 42.29 2.59
26 27 9.727859 TTTCTACTATAGGCTCATCACTAGTAG 57.272 37.037 4.43 4.44 39.48 2.57
28 29 9.019656 CATTTCTACTATAGGCTCATCACTAGT 57.980 37.037 4.43 0.00 0.00 2.57
29 30 8.465999 CCATTTCTACTATAGGCTCATCACTAG 58.534 40.741 4.43 0.00 0.00 2.57
30 31 8.170730 TCCATTTCTACTATAGGCTCATCACTA 58.829 37.037 4.43 0.00 0.00 2.74
31 32 7.013220 TCCATTTCTACTATAGGCTCATCACT 58.987 38.462 4.43 0.00 0.00 3.41
32 33 7.233389 TCCATTTCTACTATAGGCTCATCAC 57.767 40.000 4.43 0.00 0.00 3.06
33 34 7.855784 TTCCATTTCTACTATAGGCTCATCA 57.144 36.000 4.43 0.00 0.00 3.07
34 35 9.732130 AATTTCCATTTCTACTATAGGCTCATC 57.268 33.333 4.43 0.00 0.00 2.92
35 36 9.732130 GAATTTCCATTTCTACTATAGGCTCAT 57.268 33.333 4.43 0.00 0.00 2.90
36 37 8.157476 GGAATTTCCATTTCTACTATAGGCTCA 58.843 37.037 10.67 0.00 36.28 4.26
37 38 8.157476 TGGAATTTCCATTTCTACTATAGGCTC 58.843 37.037 14.24 0.00 42.67 4.70
38 39 8.045720 TGGAATTTCCATTTCTACTATAGGCT 57.954 34.615 14.24 0.00 42.67 4.58
54 55 6.038492 TCCGTTTCCGTTAATATGGAATTTCC 59.962 38.462 8.59 8.59 46.31 3.13
55 56 7.018635 TCCGTTTCCGTTAATATGGAATTTC 57.981 36.000 7.39 0.00 46.31 2.17
56 57 7.393841 TTCCGTTTCCGTTAATATGGAATTT 57.606 32.000 7.39 0.00 46.31 1.82
57 58 7.121611 ACTTTCCGTTTCCGTTAATATGGAATT 59.878 33.333 7.39 0.00 46.31 2.17
58 59 6.600427 ACTTTCCGTTTCCGTTAATATGGAAT 59.400 34.615 7.39 0.00 46.31 3.01
59 60 5.939296 ACTTTCCGTTTCCGTTAATATGGAA 59.061 36.000 3.46 3.46 45.60 3.53
60 61 5.490159 ACTTTCCGTTTCCGTTAATATGGA 58.510 37.500 0.00 0.00 37.69 3.41
61 62 5.806366 ACTTTCCGTTTCCGTTAATATGG 57.194 39.130 0.00 0.00 0.00 2.74
62 63 6.253013 GGAACTTTCCGTTTCCGTTAATATG 58.747 40.000 0.00 0.00 37.65 1.78
63 64 6.426980 GGAACTTTCCGTTTCCGTTAATAT 57.573 37.500 0.00 0.00 37.65 1.28
64 65 5.861222 GGAACTTTCCGTTTCCGTTAATA 57.139 39.130 0.00 0.00 37.65 0.98
65 66 4.754372 GGAACTTTCCGTTTCCGTTAAT 57.246 40.909 0.00 0.00 37.65 1.40
78 79 2.661594 GCACGTGGAAATGGAACTTTC 58.338 47.619 18.88 0.00 34.95 2.62
79 80 1.001815 CGCACGTGGAAATGGAACTTT 60.002 47.619 18.88 0.00 0.00 2.66
80 81 0.591170 CGCACGTGGAAATGGAACTT 59.409 50.000 18.88 0.00 0.00 2.66
81 82 0.534203 ACGCACGTGGAAATGGAACT 60.534 50.000 18.88 0.00 0.00 3.01
82 83 0.309612 AACGCACGTGGAAATGGAAC 59.690 50.000 18.88 0.00 0.00 3.62
83 84 0.589223 GAACGCACGTGGAAATGGAA 59.411 50.000 18.88 0.00 0.00 3.53
84 85 1.231958 GGAACGCACGTGGAAATGGA 61.232 55.000 18.88 0.00 0.00 3.41
85 86 1.209127 GGAACGCACGTGGAAATGG 59.791 57.895 18.88 0.00 0.00 3.16
86 87 0.385473 GTGGAACGCACGTGGAAATG 60.385 55.000 18.88 0.00 39.55 2.32
87 88 1.512156 GGTGGAACGCACGTGGAAAT 61.512 55.000 18.88 0.23 43.02 2.17
88 89 2.181521 GGTGGAACGCACGTGGAAA 61.182 57.895 18.88 0.00 43.02 3.13
89 90 2.589442 GGTGGAACGCACGTGGAA 60.589 61.111 18.88 0.00 43.02 3.53
90 91 4.953868 CGGTGGAACGCACGTGGA 62.954 66.667 18.88 0.00 43.02 4.02
92 93 4.953868 TCCGGTGGAACGCACGTG 62.954 66.667 12.28 12.28 43.02 4.49
93 94 3.736732 TTTCCGGTGGAACGCACGT 62.737 57.895 0.00 0.00 41.87 4.49
94 95 2.535788 TTTTCCGGTGGAACGCACG 61.536 57.895 0.00 0.00 41.87 5.34
95 96 1.009335 GTTTTCCGGTGGAACGCAC 60.009 57.895 0.00 0.00 41.87 5.34
96 97 1.451567 TGTTTTCCGGTGGAACGCA 60.452 52.632 0.00 0.00 41.87 5.24
97 98 1.009335 GTGTTTTCCGGTGGAACGC 60.009 57.895 0.00 8.15 41.87 4.84
98 99 1.096386 TGGTGTTTTCCGGTGGAACG 61.096 55.000 0.00 0.00 41.87 3.95
99 100 1.324383 ATGGTGTTTTCCGGTGGAAC 58.676 50.000 0.00 5.88 41.87 3.62
100 101 1.957877 GAATGGTGTTTTCCGGTGGAA 59.042 47.619 0.00 0.00 40.27 3.53
101 102 1.144093 AGAATGGTGTTTTCCGGTGGA 59.856 47.619 0.00 0.00 0.00 4.02
102 103 1.269448 CAGAATGGTGTTTTCCGGTGG 59.731 52.381 0.00 0.00 0.00 4.61
103 104 1.953686 ACAGAATGGTGTTTTCCGGTG 59.046 47.619 0.00 0.00 43.62 4.94
104 105 2.358322 ACAGAATGGTGTTTTCCGGT 57.642 45.000 0.00 0.00 43.62 5.28
105 106 3.726291 AAACAGAATGGTGTTTTCCGG 57.274 42.857 0.00 0.00 46.26 5.14
110 111 6.234177 TGGAAACAAAAACAGAATGGTGTTT 58.766 32.000 0.00 0.00 43.41 2.83
111 112 5.799213 TGGAAACAAAAACAGAATGGTGTT 58.201 33.333 0.00 0.00 29.04 3.32
112 113 5.413309 TGGAAACAAAAACAGAATGGTGT 57.587 34.783 0.00 0.00 37.88 4.16
146 147 6.710611 CAAAACGGAAATGGAAACGATTTTT 58.289 32.000 0.00 0.00 30.73 1.94
147 148 5.277106 GCAAAACGGAAATGGAAACGATTTT 60.277 36.000 0.00 0.00 30.73 1.82
148 149 4.210328 GCAAAACGGAAATGGAAACGATTT 59.790 37.500 0.00 0.00 32.80 2.17
149 150 3.738791 GCAAAACGGAAATGGAAACGATT 59.261 39.130 0.00 0.00 0.00 3.34
150 151 3.243569 TGCAAAACGGAAATGGAAACGAT 60.244 39.130 0.00 0.00 0.00 3.73
151 152 2.099263 TGCAAAACGGAAATGGAAACGA 59.901 40.909 0.00 0.00 0.00 3.85
152 153 2.464865 TGCAAAACGGAAATGGAAACG 58.535 42.857 0.00 0.00 0.00 3.60
153 154 4.866682 TTTGCAAAACGGAAATGGAAAC 57.133 36.364 10.02 0.00 30.87 2.78
154 155 6.442513 AAATTTGCAAAACGGAAATGGAAA 57.557 29.167 17.19 0.00 44.08 3.13
155 156 5.008118 GGAAATTTGCAAAACGGAAATGGAA 59.992 36.000 17.19 0.00 44.08 3.53
156 157 4.513318 GGAAATTTGCAAAACGGAAATGGA 59.487 37.500 17.19 0.00 44.08 3.41
157 158 4.274459 TGGAAATTTGCAAAACGGAAATGG 59.726 37.500 17.19 0.00 44.08 3.16
158 159 5.415415 TGGAAATTTGCAAAACGGAAATG 57.585 34.783 17.19 0.00 44.08 2.32
159 160 6.631971 AATGGAAATTTGCAAAACGGAAAT 57.368 29.167 17.19 3.59 46.53 2.17
160 161 6.442513 AAATGGAAATTTGCAAAACGGAAA 57.557 29.167 17.19 1.20 39.47 3.13
161 162 5.008118 GGAAATGGAAATTTGCAAAACGGAA 59.992 36.000 17.19 2.85 32.99 4.30
162 163 4.513318 GGAAATGGAAATTTGCAAAACGGA 59.487 37.500 17.19 0.00 32.99 4.69
163 164 4.610231 CGGAAATGGAAATTTGCAAAACGG 60.610 41.667 17.19 10.40 32.39 4.44
164 165 4.453339 CGGAAATGGAAATTTGCAAAACG 58.547 39.130 17.19 14.00 32.39 3.60
165 166 4.024133 AGCGGAAATGGAAATTTGCAAAAC 60.024 37.500 17.19 10.47 32.39 2.43
166 167 4.133078 AGCGGAAATGGAAATTTGCAAAA 58.867 34.783 17.19 0.00 32.39 2.44
167 168 3.737850 AGCGGAAATGGAAATTTGCAAA 58.262 36.364 16.71 15.44 32.39 3.68
168 169 3.399440 AGCGGAAATGGAAATTTGCAA 57.601 38.095 16.71 0.00 32.39 4.08
169 170 3.399440 AAGCGGAAATGGAAATTTGCA 57.601 38.095 15.13 15.13 32.39 4.08
170 171 3.745458 TGAAAGCGGAAATGGAAATTTGC 59.255 39.130 2.22 2.22 0.00 3.68
171 172 7.775397 ATATGAAAGCGGAAATGGAAATTTG 57.225 32.000 0.00 0.00 0.00 2.32
172 173 8.791327 AAATATGAAAGCGGAAATGGAAATTT 57.209 26.923 0.00 0.00 0.00 1.82
173 174 7.495606 GGAAATATGAAAGCGGAAATGGAAATT 59.504 33.333 0.00 0.00 0.00 1.82
174 175 6.986231 GGAAATATGAAAGCGGAAATGGAAAT 59.014 34.615 0.00 0.00 0.00 2.17
175 176 6.154363 AGGAAATATGAAAGCGGAAATGGAAA 59.846 34.615 0.00 0.00 0.00 3.13
176 177 5.656416 AGGAAATATGAAAGCGGAAATGGAA 59.344 36.000 0.00 0.00 0.00 3.53
177 178 5.200483 AGGAAATATGAAAGCGGAAATGGA 58.800 37.500 0.00 0.00 0.00 3.41
178 179 5.300286 AGAGGAAATATGAAAGCGGAAATGG 59.700 40.000 0.00 0.00 0.00 3.16
179 180 6.382869 AGAGGAAATATGAAAGCGGAAATG 57.617 37.500 0.00 0.00 0.00 2.32
180 181 5.532779 GGAGAGGAAATATGAAAGCGGAAAT 59.467 40.000 0.00 0.00 0.00 2.17
181 182 4.881850 GGAGAGGAAATATGAAAGCGGAAA 59.118 41.667 0.00 0.00 0.00 3.13
182 183 4.451900 GGAGAGGAAATATGAAAGCGGAA 58.548 43.478 0.00 0.00 0.00 4.30
183 184 3.492656 CGGAGAGGAAATATGAAAGCGGA 60.493 47.826 0.00 0.00 0.00 5.54
184 185 2.802816 CGGAGAGGAAATATGAAAGCGG 59.197 50.000 0.00 0.00 0.00 5.52
185 186 3.458189 ACGGAGAGGAAATATGAAAGCG 58.542 45.455 0.00 0.00 0.00 4.68
186 187 5.354234 TGAAACGGAGAGGAAATATGAAAGC 59.646 40.000 0.00 0.00 0.00 3.51
187 188 6.985188 TGAAACGGAGAGGAAATATGAAAG 57.015 37.500 0.00 0.00 0.00 2.62
188 189 6.940298 AGTTGAAACGGAGAGGAAATATGAAA 59.060 34.615 0.00 0.00 0.00 2.69
189 190 6.472887 AGTTGAAACGGAGAGGAAATATGAA 58.527 36.000 0.00 0.00 0.00 2.57
190 191 6.049955 AGTTGAAACGGAGAGGAAATATGA 57.950 37.500 0.00 0.00 0.00 2.15
191 192 6.743575 AAGTTGAAACGGAGAGGAAATATG 57.256 37.500 0.00 0.00 0.00 1.78
192 193 6.374613 GGAAAGTTGAAACGGAGAGGAAATAT 59.625 38.462 0.00 0.00 0.00 1.28
193 194 5.704053 GGAAAGTTGAAACGGAGAGGAAATA 59.296 40.000 0.00 0.00 0.00 1.40
194 195 4.519350 GGAAAGTTGAAACGGAGAGGAAAT 59.481 41.667 0.00 0.00 0.00 2.17
195 196 3.881089 GGAAAGTTGAAACGGAGAGGAAA 59.119 43.478 0.00 0.00 0.00 3.13
196 197 3.118186 TGGAAAGTTGAAACGGAGAGGAA 60.118 43.478 0.00 0.00 0.00 3.36
197 198 2.436542 TGGAAAGTTGAAACGGAGAGGA 59.563 45.455 0.00 0.00 0.00 3.71
198 199 2.548480 GTGGAAAGTTGAAACGGAGAGG 59.452 50.000 0.00 0.00 0.00 3.69
199 200 3.467803 AGTGGAAAGTTGAAACGGAGAG 58.532 45.455 0.00 0.00 0.00 3.20
200 201 3.463944 GAGTGGAAAGTTGAAACGGAGA 58.536 45.455 0.00 0.00 0.00 3.71
201 202 2.548480 GGAGTGGAAAGTTGAAACGGAG 59.452 50.000 0.00 0.00 0.00 4.63
202 203 2.092861 TGGAGTGGAAAGTTGAAACGGA 60.093 45.455 0.00 0.00 0.00 4.69
203 204 2.294074 TGGAGTGGAAAGTTGAAACGG 58.706 47.619 0.00 0.00 0.00 4.44
204 205 4.568152 AATGGAGTGGAAAGTTGAAACG 57.432 40.909 0.00 0.00 0.00 3.60
205 206 6.337356 TGAAAATGGAGTGGAAAGTTGAAAC 58.663 36.000 0.00 0.00 0.00 2.78
206 207 6.537453 TGAAAATGGAGTGGAAAGTTGAAA 57.463 33.333 0.00 0.00 0.00 2.69
207 208 6.239289 GGATGAAAATGGAGTGGAAAGTTGAA 60.239 38.462 0.00 0.00 0.00 2.69
208 209 5.243730 GGATGAAAATGGAGTGGAAAGTTGA 59.756 40.000 0.00 0.00 0.00 3.18
209 210 5.473039 GGATGAAAATGGAGTGGAAAGTTG 58.527 41.667 0.00 0.00 0.00 3.16
210 211 4.528206 GGGATGAAAATGGAGTGGAAAGTT 59.472 41.667 0.00 0.00 0.00 2.66
211 212 4.089361 GGGATGAAAATGGAGTGGAAAGT 58.911 43.478 0.00 0.00 0.00 2.66
212 213 4.347607 AGGGATGAAAATGGAGTGGAAAG 58.652 43.478 0.00 0.00 0.00 2.62
213 214 4.402616 AGGGATGAAAATGGAGTGGAAA 57.597 40.909 0.00 0.00 0.00 3.13
214 215 5.732331 ATAGGGATGAAAATGGAGTGGAA 57.268 39.130 0.00 0.00 0.00 3.53
215 216 6.332635 ACATATAGGGATGAAAATGGAGTGGA 59.667 38.462 0.00 0.00 0.00 4.02
216 217 6.546484 ACATATAGGGATGAAAATGGAGTGG 58.454 40.000 0.00 0.00 0.00 4.00
217 218 7.331934 CGTACATATAGGGATGAAAATGGAGTG 59.668 40.741 0.00 0.00 0.00 3.51
218 219 7.386851 CGTACATATAGGGATGAAAATGGAGT 58.613 38.462 0.00 0.00 0.00 3.85
219 220 6.313905 GCGTACATATAGGGATGAAAATGGAG 59.686 42.308 0.00 0.00 0.00 3.86
220 221 6.170506 GCGTACATATAGGGATGAAAATGGA 58.829 40.000 0.00 0.00 0.00 3.41
221 222 5.063438 CGCGTACATATAGGGATGAAAATGG 59.937 44.000 0.00 0.00 0.00 3.16
222 223 5.867174 TCGCGTACATATAGGGATGAAAATG 59.133 40.000 5.77 0.00 0.00 2.32
223 224 6.032956 TCGCGTACATATAGGGATGAAAAT 57.967 37.500 5.77 0.00 0.00 1.82
224 225 5.010314 ACTCGCGTACATATAGGGATGAAAA 59.990 40.000 5.77 0.00 0.00 2.29
225 226 4.521639 ACTCGCGTACATATAGGGATGAAA 59.478 41.667 5.77 0.00 0.00 2.69
226 227 4.077108 ACTCGCGTACATATAGGGATGAA 58.923 43.478 5.77 0.00 0.00 2.57
227 228 3.439129 CACTCGCGTACATATAGGGATGA 59.561 47.826 5.77 0.00 0.00 2.92
228 229 3.759418 CACTCGCGTACATATAGGGATG 58.241 50.000 5.77 0.00 0.00 3.51
229 230 2.163815 GCACTCGCGTACATATAGGGAT 59.836 50.000 5.77 0.00 0.00 3.85
230 231 1.538512 GCACTCGCGTACATATAGGGA 59.461 52.381 5.77 0.00 0.00 4.20
231 232 1.540267 AGCACTCGCGTACATATAGGG 59.460 52.381 5.77 0.00 45.49 3.53
232 233 2.991434 AGCACTCGCGTACATATAGG 57.009 50.000 5.77 0.00 45.49 2.57
233 234 6.929587 AAAATAGCACTCGCGTACATATAG 57.070 37.500 5.77 0.00 45.49 1.31
265 266 7.201435 GGAACTGTGTTTTGAAGCTACAAAAAG 60.201 37.037 0.00 0.00 46.43 2.27
344 345 1.376812 GTTGAAGGGTAGGGTGCGG 60.377 63.158 0.00 0.00 0.00 5.69
353 354 5.385198 ACAATGTTGAGTATGTTGAAGGGT 58.615 37.500 0.00 0.00 0.00 4.34
382 383 8.239998 GCATTTCTTCAAGTTTTATAGCACTCT 58.760 33.333 0.00 0.00 0.00 3.24
426 427 9.029368 TCCTCAGTAAGATATCATGTCCATTAG 57.971 37.037 5.32 0.00 0.00 1.73
429 430 7.015680 AGTCCTCAGTAAGATATCATGTCCAT 58.984 38.462 5.32 0.00 0.00 3.41
450 451 6.636562 TTGCTATGCTAAGTAGTCTAGTCC 57.363 41.667 0.00 0.00 0.00 3.85
452 453 5.594725 TGCTTGCTATGCTAAGTAGTCTAGT 59.405 40.000 0.00 0.00 0.00 2.57
463 465 7.277760 CCGTACATATAATTGCTTGCTATGCTA 59.722 37.037 0.00 0.00 0.00 3.49
623 626 3.691118 CACAAGTGGGTGACTGGATTATG 59.309 47.826 0.00 0.00 41.32 1.90
630 633 0.594602 CATGCACAAGTGGGTGACTG 59.405 55.000 2.00 0.00 41.32 3.51
648 651 1.832167 GTTTCCCTGTGCCTTGCCA 60.832 57.895 0.00 0.00 0.00 4.92
650 653 1.662044 CAGTTTCCCTGTGCCTTGC 59.338 57.895 0.00 0.00 36.37 4.01
661 664 4.632153 TCTCACTAAGCTTGACAGTTTCC 58.368 43.478 9.86 0.00 0.00 3.13
668 671 6.037172 TGTTGTCTTTTCTCACTAAGCTTGAC 59.963 38.462 9.86 4.30 0.00 3.18
697 700 6.611381 TGTATGCTTGCTTGTTTTCTCATAC 58.389 36.000 0.00 0.00 36.95 2.39
726 729 0.457851 TGCTTGTTTGTTTCCCACCG 59.542 50.000 0.00 0.00 0.00 4.94
752 755 4.092383 CACTATTTCGTAACCTTTCCGTGG 59.908 45.833 0.00 0.00 0.00 4.94
763 766 8.440059 GTGATGAATTGTGTCACTATTTCGTAA 58.560 33.333 12.88 2.44 39.24 3.18
767 770 8.506437 TCTTGTGATGAATTGTGTCACTATTTC 58.494 33.333 12.88 8.79 42.03 2.17
783 786 2.161855 GCAACATGGGTCTTGTGATGA 58.838 47.619 0.00 0.00 0.00 2.92
798 801 2.284754 TAGCAAACATGGAGGCAACA 57.715 45.000 0.00 0.00 41.41 3.33
799 802 3.874392 AATAGCAAACATGGAGGCAAC 57.126 42.857 0.00 0.00 0.00 4.17
800 803 4.888326 AAAATAGCAAACATGGAGGCAA 57.112 36.364 0.00 0.00 0.00 4.52
801 804 4.527816 AGAAAAATAGCAAACATGGAGGCA 59.472 37.500 0.00 0.00 0.00 4.75
802 805 5.077134 AGAAAAATAGCAAACATGGAGGC 57.923 39.130 0.00 0.00 0.00 4.70
803 806 7.260603 CCTAAGAAAAATAGCAAACATGGAGG 58.739 38.462 0.00 0.00 0.00 4.30
804 807 7.122650 TCCCTAAGAAAAATAGCAAACATGGAG 59.877 37.037 0.00 0.00 0.00 3.86
805 808 6.951198 TCCCTAAGAAAAATAGCAAACATGGA 59.049 34.615 0.00 0.00 0.00 3.41
806 809 7.169158 TCCCTAAGAAAAATAGCAAACATGG 57.831 36.000 0.00 0.00 0.00 3.66
828 831 1.604278 GTCGCATGGGAGCTATTTTCC 59.396 52.381 13.49 0.00 0.00 3.13
829 832 1.261619 CGTCGCATGGGAGCTATTTTC 59.738 52.381 13.49 0.00 0.00 2.29
830 833 1.299541 CGTCGCATGGGAGCTATTTT 58.700 50.000 13.49 0.00 0.00 1.82
878 881 5.845103 TGAGAACTATTACAACCAACGACA 58.155 37.500 0.00 0.00 0.00 4.35
896 899 2.743664 CAACGGAGATGTTGCATGAGAA 59.256 45.455 0.00 0.00 42.34 2.87
1044 1185 3.260884 GGTGTCCTCTCTTGTACCAATGA 59.739 47.826 0.00 0.00 0.00 2.57
1153 1660 2.024022 GAACAACGTTGCTGCGCA 59.976 55.556 27.61 10.98 36.47 6.09
1343 1851 0.035881 CCTGCTCTGGTTTGCTCTCA 59.964 55.000 0.00 0.00 0.00 3.27
1458 1974 6.401796 GCACATTGCTTGAATTTCTGAAATCC 60.402 38.462 15.43 4.23 40.96 3.01
1472 1988 2.739913 CTCAAAATGGGCACATTGCTTG 59.260 45.455 16.51 16.62 46.25 4.01
1586 2121 2.451294 GGGGCCCCAGATCCAGAT 60.451 66.667 37.61 0.00 35.81 2.90
1984 2627 3.078458 TGCCTACCTTCTATATGGGCCTA 59.922 47.826 4.53 0.00 37.55 3.93
2065 2711 2.553602 TGTCAATGACCATGTGCACTTC 59.446 45.455 19.41 9.59 0.00 3.01
2210 2863 2.356135 CGAAACAACATGGGACCCTAG 58.644 52.381 13.00 6.66 0.00 3.02
2279 2932 6.696441 ACAATTGCAATGTTTTTGGTTCAT 57.304 29.167 13.82 0.00 0.00 2.57
2330 2983 3.740141 CGACTTACACTTCCCAACACACT 60.740 47.826 0.00 0.00 0.00 3.55
2359 3012 2.327568 CAAACAAGCGGCAGTTAATGG 58.672 47.619 10.52 0.16 0.00 3.16
2379 3032 4.498009 CCATTCACAATTAATCACCGGAGC 60.498 45.833 9.46 0.00 0.00 4.70
2398 3051 2.362889 CCCTCTTTGCCGGCCATT 60.363 61.111 26.77 0.00 0.00 3.16
2404 3057 2.930950 TGGATATTTCCCTCTTTGCCG 58.069 47.619 0.00 0.00 41.83 5.69
2489 3142 1.207329 AGGAATTACTCCCACACTCGC 59.793 52.381 0.00 0.00 46.81 5.03
2490 3143 2.418746 CCAGGAATTACTCCCACACTCG 60.419 54.545 0.00 0.00 46.81 4.18
2491 3144 2.681097 GCCAGGAATTACTCCCACACTC 60.681 54.545 0.00 0.00 46.81 3.51
2492 3145 1.282157 GCCAGGAATTACTCCCACACT 59.718 52.381 0.00 0.00 46.81 3.55
2493 3146 1.004277 TGCCAGGAATTACTCCCACAC 59.996 52.381 0.00 0.00 46.81 3.82
2494 3147 1.367346 TGCCAGGAATTACTCCCACA 58.633 50.000 0.00 0.00 46.81 4.17
2495 3148 2.301346 CATGCCAGGAATTACTCCCAC 58.699 52.381 0.00 0.00 46.81 4.61
2496 3149 1.215173 CCATGCCAGGAATTACTCCCA 59.785 52.381 0.00 0.00 46.81 4.37
2497 3150 1.479389 CCCATGCCAGGAATTACTCCC 60.479 57.143 0.00 0.00 46.81 4.30
2498 3151 1.215423 ACCCATGCCAGGAATTACTCC 59.785 52.381 0.00 0.00 45.81 3.85
2499 3152 2.092429 TGACCCATGCCAGGAATTACTC 60.092 50.000 0.00 0.00 0.00 2.59
2500 3153 1.922447 TGACCCATGCCAGGAATTACT 59.078 47.619 0.00 0.00 0.00 2.24
2501 3154 2.301346 CTGACCCATGCCAGGAATTAC 58.699 52.381 0.00 0.00 0.00 1.89
2502 3155 1.410083 GCTGACCCATGCCAGGAATTA 60.410 52.381 0.00 0.00 0.00 1.40
2503 3156 0.685458 GCTGACCCATGCCAGGAATT 60.685 55.000 0.00 0.00 0.00 2.17
2504 3157 1.076485 GCTGACCCATGCCAGGAAT 60.076 57.895 0.00 0.00 0.00 3.01
2505 3158 2.356278 GCTGACCCATGCCAGGAA 59.644 61.111 0.00 0.00 0.00 3.36
2510 3163 2.361104 TTTCGGCTGACCCATGCC 60.361 61.111 0.00 0.00 45.25 4.40
2511 3164 2.877691 GTTTCGGCTGACCCATGC 59.122 61.111 0.00 0.00 0.00 4.06
2512 3165 2.398554 CCGTTTCGGCTGACCCATG 61.399 63.158 0.00 0.00 41.17 3.66
2513 3166 2.046314 CCGTTTCGGCTGACCCAT 60.046 61.111 0.00 0.00 41.17 4.00
2522 3175 2.396954 GTAGCATACAGGCCGTTTCGG 61.397 57.143 5.57 3.67 45.57 4.30
2523 3176 0.928229 GTAGCATACAGGCCGTTTCG 59.072 55.000 5.57 0.00 42.43 3.46
2524 3177 2.311124 AGTAGCATACAGGCCGTTTC 57.689 50.000 5.57 0.00 46.26 2.78
2525 3178 2.102588 CCTAGTAGCATACAGGCCGTTT 59.897 50.000 5.57 0.00 46.26 3.60
2526 3179 1.687123 CCTAGTAGCATACAGGCCGTT 59.313 52.381 5.57 0.00 46.26 4.44
2527 3180 1.133575 TCCTAGTAGCATACAGGCCGT 60.134 52.381 0.00 0.49 46.26 5.68
2528 3181 1.617322 TCCTAGTAGCATACAGGCCG 58.383 55.000 0.00 0.00 46.26 6.13
2529 3182 4.284746 AGAAATCCTAGTAGCATACAGGCC 59.715 45.833 0.00 0.00 46.26 5.19
2530 3183 5.476091 AGAAATCCTAGTAGCATACAGGC 57.524 43.478 0.00 0.00 46.26 4.85
2531 3184 6.459923 GGAAGAAATCCTAGTAGCATACAGG 58.540 44.000 0.00 0.00 44.33 4.00
2546 3199 7.351981 CAAATTTTTCAAACCGGGAAGAAATC 58.648 34.615 6.32 0.00 30.92 2.17
2547 3200 6.238621 GCAAATTTTTCAAACCGGGAAGAAAT 60.239 34.615 6.32 6.38 30.92 2.17
2548 3201 5.065346 GCAAATTTTTCAAACCGGGAAGAAA 59.935 36.000 6.32 9.86 0.00 2.52
2549 3202 4.572795 GCAAATTTTTCAAACCGGGAAGAA 59.427 37.500 6.32 3.21 0.00 2.52
2550 3203 4.123506 GCAAATTTTTCAAACCGGGAAGA 58.876 39.130 6.32 0.00 0.00 2.87
2551 3204 3.873952 TGCAAATTTTTCAAACCGGGAAG 59.126 39.130 6.32 0.00 0.00 3.46
2552 3205 3.623510 GTGCAAATTTTTCAAACCGGGAA 59.376 39.130 6.32 0.00 0.00 3.97
2553 3206 3.198872 GTGCAAATTTTTCAAACCGGGA 58.801 40.909 6.32 0.00 0.00 5.14
2554 3207 2.033322 CGTGCAAATTTTTCAAACCGGG 60.033 45.455 6.32 0.00 0.00 5.73
2555 3208 2.605366 ACGTGCAAATTTTTCAAACCGG 59.395 40.909 0.00 0.00 0.00 5.28
2556 3209 3.302156 GGACGTGCAAATTTTTCAAACCG 60.302 43.478 0.63 0.00 0.00 4.44
2557 3210 3.619038 TGGACGTGCAAATTTTTCAAACC 59.381 39.130 7.52 0.00 0.00 3.27
2558 3211 4.849111 TGGACGTGCAAATTTTTCAAAC 57.151 36.364 7.52 0.00 0.00 2.93
2559 3212 5.582269 TGATTGGACGTGCAAATTTTTCAAA 59.418 32.000 26.45 0.00 0.00 2.69
2560 3213 5.111989 TGATTGGACGTGCAAATTTTTCAA 58.888 33.333 26.45 7.33 0.00 2.69
2561 3214 4.686972 TGATTGGACGTGCAAATTTTTCA 58.313 34.783 26.45 20.59 0.00 2.69
2562 3215 4.150451 CCTGATTGGACGTGCAAATTTTTC 59.850 41.667 26.45 18.31 38.35 2.29
2563 3216 4.057432 CCTGATTGGACGTGCAAATTTTT 58.943 39.130 26.45 9.67 38.35 1.94
2564 3217 3.069443 ACCTGATTGGACGTGCAAATTTT 59.931 39.130 26.45 10.08 39.71 1.82
2565 3218 2.627699 ACCTGATTGGACGTGCAAATTT 59.372 40.909 26.45 10.48 39.71 1.82
2566 3219 2.238521 ACCTGATTGGACGTGCAAATT 58.761 42.857 26.45 11.28 39.71 1.82
2567 3220 1.909700 ACCTGATTGGACGTGCAAAT 58.090 45.000 26.45 14.55 39.71 2.32
2568 3221 1.336440 CAACCTGATTGGACGTGCAAA 59.664 47.619 26.45 10.26 39.71 3.68
2569 3222 0.950836 CAACCTGATTGGACGTGCAA 59.049 50.000 25.00 25.00 39.71 4.08
2570 3223 1.514678 GCAACCTGATTGGACGTGCA 61.515 55.000 5.33 5.33 39.56 4.57
2571 3224 1.210155 GCAACCTGATTGGACGTGC 59.790 57.895 0.00 0.00 38.88 5.34
2572 3225 2.627791 TGCAACCTGATTGGACGTG 58.372 52.632 0.00 0.00 38.88 4.49
2588 3241 3.582714 AAAGCTCTGCAATTTAGGTGC 57.417 42.857 0.00 0.00 42.55 5.01
2589 3242 5.776744 AGAAAAAGCTCTGCAATTTAGGTG 58.223 37.500 0.00 0.00 0.00 4.00
2590 3243 6.410942 AAGAAAAAGCTCTGCAATTTAGGT 57.589 33.333 0.00 0.00 0.00 3.08
2591 3244 7.031975 CCTAAGAAAAAGCTCTGCAATTTAGG 58.968 38.462 0.00 0.00 0.00 2.69
2592 3245 7.540055 CACCTAAGAAAAAGCTCTGCAATTTAG 59.460 37.037 0.00 0.00 0.00 1.85
2593 3246 7.370383 CACCTAAGAAAAAGCTCTGCAATTTA 58.630 34.615 0.00 0.00 0.00 1.40
2594 3247 6.218746 CACCTAAGAAAAAGCTCTGCAATTT 58.781 36.000 0.00 0.00 0.00 1.82
2595 3248 5.776744 CACCTAAGAAAAAGCTCTGCAATT 58.223 37.500 0.00 0.00 0.00 2.32
2596 3249 4.321527 GCACCTAAGAAAAAGCTCTGCAAT 60.322 41.667 0.00 0.00 0.00 3.56
2597 3250 3.004734 GCACCTAAGAAAAAGCTCTGCAA 59.995 43.478 0.00 0.00 0.00 4.08
2598 3251 2.554032 GCACCTAAGAAAAAGCTCTGCA 59.446 45.455 0.00 0.00 0.00 4.41
2599 3252 2.095008 GGCACCTAAGAAAAAGCTCTGC 60.095 50.000 0.00 0.00 0.00 4.26
2600 3253 3.839051 GGCACCTAAGAAAAAGCTCTG 57.161 47.619 0.00 0.00 0.00 3.35
2625 3278 4.767255 CTCCCTCCGTGCAGGTGC 62.767 72.222 5.57 0.00 41.99 5.01
2626 3279 3.302347 GACTCCCTCCGTGCAGGTG 62.302 68.421 5.57 1.90 41.99 4.00
2627 3280 2.997897 GACTCCCTCCGTGCAGGT 60.998 66.667 5.57 0.00 41.99 4.00
2628 3281 1.831652 AAAGACTCCCTCCGTGCAGG 61.832 60.000 0.00 0.00 42.97 4.85
2629 3282 0.390472 GAAAGACTCCCTCCGTGCAG 60.390 60.000 0.00 0.00 0.00 4.41
2630 3283 1.118965 TGAAAGACTCCCTCCGTGCA 61.119 55.000 0.00 0.00 0.00 4.57
2631 3284 0.034896 TTGAAAGACTCCCTCCGTGC 59.965 55.000 0.00 0.00 0.00 5.34
2632 3285 1.608283 GGTTGAAAGACTCCCTCCGTG 60.608 57.143 0.00 0.00 0.00 4.94
2633 3286 0.685660 GGTTGAAAGACTCCCTCCGT 59.314 55.000 0.00 0.00 0.00 4.69
2634 3287 0.685097 TGGTTGAAAGACTCCCTCCG 59.315 55.000 0.00 0.00 0.00 4.63
2635 3288 2.784347 CTTGGTTGAAAGACTCCCTCC 58.216 52.381 0.00 0.00 0.00 4.30
2636 3289 2.155279 GCTTGGTTGAAAGACTCCCTC 58.845 52.381 0.00 0.00 0.00 4.30
2637 3290 1.494721 TGCTTGGTTGAAAGACTCCCT 59.505 47.619 0.00 0.00 0.00 4.20
2638 3291 1.609072 GTGCTTGGTTGAAAGACTCCC 59.391 52.381 0.00 0.00 0.00 4.30
2639 3292 1.609072 GGTGCTTGGTTGAAAGACTCC 59.391 52.381 0.00 0.00 0.00 3.85
2640 3293 2.297701 TGGTGCTTGGTTGAAAGACTC 58.702 47.619 0.00 0.00 0.00 3.36
2641 3294 2.435372 TGGTGCTTGGTTGAAAGACT 57.565 45.000 0.00 0.00 0.00 3.24
2642 3295 3.733443 AATGGTGCTTGGTTGAAAGAC 57.267 42.857 0.00 0.00 0.00 3.01
2643 3296 4.751767 AAAATGGTGCTTGGTTGAAAGA 57.248 36.364 0.00 0.00 0.00 2.52
2644 3297 7.495135 AATAAAAATGGTGCTTGGTTGAAAG 57.505 32.000 0.00 0.00 0.00 2.62
2645 3298 7.872113 AAATAAAAATGGTGCTTGGTTGAAA 57.128 28.000 0.00 0.00 0.00 2.69
2646 3299 7.872113 AAAATAAAAATGGTGCTTGGTTGAA 57.128 28.000 0.00 0.00 0.00 2.69
2647 3300 9.566432 AATAAAATAAAAATGGTGCTTGGTTGA 57.434 25.926 0.00 0.00 0.00 3.18
2671 3325 8.449251 AAAACACCATAGCACAAATCAAAAAT 57.551 26.923 0.00 0.00 0.00 1.82
2701 3355 6.483385 TCAGTTGAAACACACGAGTAAAAA 57.517 33.333 0.00 0.00 0.00 1.94
2722 3377 1.063266 AGAGGGGCACAACCTTTTTCA 60.063 47.619 0.00 0.00 38.79 2.69
2751 3406 4.471386 ACTATGGGCACACTAGATGTCTTT 59.529 41.667 11.03 0.00 40.64 2.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.