Multiple sequence alignment - TraesCS5B01G553100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G553100 chr5B 100.000 2479 0 0 1 2479 703304874 703307352 0.000000e+00 4578
1 TraesCS5B01G553100 chr5B 91.465 1113 59 22 458 1562 703291094 703292178 0.000000e+00 1496
2 TraesCS5B01G553100 chr5B 82.868 823 77 44 698 1484 703268433 703269227 0.000000e+00 680
3 TraesCS5B01G553100 chr5B 84.816 652 44 25 851 1480 703271395 703272013 2.730000e-169 604
4 TraesCS5B01G553100 chr5B 80.583 206 37 3 267 470 703290100 703290304 3.300000e-34 156
5 TraesCS5B01G553100 chr5D 87.345 1699 129 37 49 1727 551023719 551025351 0.000000e+00 1868
6 TraesCS5B01G553100 chr5D 81.635 893 92 46 738 1583 550646134 550647001 0.000000e+00 675
7 TraesCS5B01G553100 chr5D 94.118 442 24 2 38 479 550650083 550650522 0.000000e+00 671
8 TraesCS5B01G553100 chr5D 85.316 681 64 27 811 1457 550964522 550965200 0.000000e+00 671
9 TraesCS5B01G553100 chr5D 89.614 414 23 7 1271 1683 550661172 550661566 2.200000e-140 508
10 TraesCS5B01G553100 chr5D 84.162 543 38 26 968 1480 550965490 550966014 1.330000e-132 483
11 TraesCS5B01G553100 chr5D 92.881 295 19 2 675 967 550660170 550660464 6.340000e-116 427
12 TraesCS5B01G553100 chr5D 95.074 203 10 0 973 1175 550660608 550660810 1.110000e-83 320
13 TraesCS5B01G553100 chr5D 95.726 117 5 0 2056 2172 30459188 30459072 3.250000e-44 189
14 TraesCS5B01G553100 chr5D 93.077 130 8 1 2044 2172 566048275 566048404 3.250000e-44 189
15 TraesCS5B01G553100 chr4A 79.250 1253 117 77 605 1776 616962224 616961034 0.000000e+00 741
16 TraesCS5B01G553100 chr4A 81.875 800 66 42 722 1480 616978045 616977284 3.530000e-168 601
17 TraesCS5B01G553100 chr4A 92.786 402 16 6 449 842 616918923 616918527 9.950000e-159 569
18 TraesCS5B01G553100 chr7D 93.893 131 5 3 2056 2186 8561965 8562092 7.000000e-46 195
19 TraesCS5B01G553100 chr7D 95.798 119 5 0 2056 2174 600971086 600970968 2.520000e-45 193
20 TraesCS5B01G553100 chr3D 92.537 134 8 2 2041 2172 7308190 7308057 9.050000e-45 191
21 TraesCS5B01G553100 chr3D 94.309 123 7 0 2050 2172 346837439 346837561 3.250000e-44 189
22 TraesCS5B01G553100 chr3D 92.248 129 9 1 2051 2178 46259358 46259486 5.450000e-42 182
23 TraesCS5B01G553100 chr6B 92.308 130 9 1 2051 2179 27078092 27077963 1.510000e-42 183
24 TraesCS5B01G553100 chr6B 91.729 133 10 1 2050 2181 135263325 135263457 1.510000e-42 183


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G553100 chr5B 703304874 703307352 2478 False 4578.000000 4578 100.0000 1 2479 1 chr5B.!!$F1 2478
1 TraesCS5B01G553100 chr5B 703290100 703292178 2078 False 826.000000 1496 86.0240 267 1562 2 chr5B.!!$F3 1295
2 TraesCS5B01G553100 chr5B 703268433 703272013 3580 False 642.000000 680 83.8420 698 1484 2 chr5B.!!$F2 786
3 TraesCS5B01G553100 chr5D 551023719 551025351 1632 False 1868.000000 1868 87.3450 49 1727 1 chr5D.!!$F1 1678
4 TraesCS5B01G553100 chr5D 550646134 550650522 4388 False 673.000000 675 87.8765 38 1583 2 chr5D.!!$F3 1545
5 TraesCS5B01G553100 chr5D 550964522 550966014 1492 False 577.000000 671 84.7390 811 1480 2 chr5D.!!$F5 669
6 TraesCS5B01G553100 chr5D 550660170 550661566 1396 False 418.333333 508 92.5230 675 1683 3 chr5D.!!$F4 1008
7 TraesCS5B01G553100 chr4A 616961034 616962224 1190 True 741.000000 741 79.2500 605 1776 1 chr4A.!!$R2 1171
8 TraesCS5B01G553100 chr4A 616977284 616978045 761 True 601.000000 601 81.8750 722 1480 1 chr4A.!!$R3 758

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
232 235 0.035317 GCATGGACCATCATCGCCTA 59.965 55.0 3.21 0.0 0.0 3.93 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2056 9605 0.032813 TATTTCCGGACGGAGGGAGT 60.033 55.0 13.64 0.0 46.06 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 5.544650 GGCACCTGAACTAACTAACTAACA 58.455 41.667 0.00 0.00 0.00 2.41
27 28 5.407691 GGCACCTGAACTAACTAACTAACAC 59.592 44.000 0.00 0.00 0.00 3.32
28 29 6.221659 GCACCTGAACTAACTAACTAACACT 58.778 40.000 0.00 0.00 0.00 3.55
29 30 7.373493 GCACCTGAACTAACTAACTAACACTA 58.627 38.462 0.00 0.00 0.00 2.74
30 31 7.541437 GCACCTGAACTAACTAACTAACACTAG 59.459 40.741 0.00 0.00 0.00 2.57
31 32 8.574737 CACCTGAACTAACTAACTAACACTAGT 58.425 37.037 0.00 0.00 40.25 2.57
74 75 0.179094 TGCGTCGGCCGAATTTCTAT 60.179 50.000 32.93 0.00 39.56 1.98
100 103 0.911769 AGATCTTCATCCAACGGCCA 59.088 50.000 2.24 0.00 0.00 5.36
116 119 1.966493 GCCACAACCGACTATGCACG 61.966 60.000 0.00 0.00 0.00 5.34
136 139 2.546795 CGATTCATCTTCTTCCTCCCCG 60.547 54.545 0.00 0.00 0.00 5.73
138 141 1.227380 CATCTTCTTCCTCCCCGCG 60.227 63.158 0.00 0.00 0.00 6.46
163 166 3.917760 GTCGATGCCGGGCTAGCT 61.918 66.667 21.46 1.96 36.24 3.32
166 169 2.856628 CGATGCCGGGCTAGCTACA 61.857 63.158 21.46 8.23 0.00 2.74
209 212 4.240103 CATCTCGCCATCCCCGCA 62.240 66.667 0.00 0.00 0.00 5.69
222 225 4.720902 CCGCACTGGCATGGACCA 62.721 66.667 0.00 0.00 41.24 4.02
223 226 2.438975 CGCACTGGCATGGACCAT 60.439 61.111 0.00 0.00 39.54 3.55
224 227 2.475466 CGCACTGGCATGGACCATC 61.475 63.158 3.21 0.00 39.54 3.51
225 228 1.378911 GCACTGGCATGGACCATCA 60.379 57.895 3.21 0.00 39.54 3.07
229 232 1.512996 CTGGCATGGACCATCATCGC 61.513 60.000 3.21 4.92 39.54 4.58
231 234 1.228063 GCATGGACCATCATCGCCT 60.228 57.895 3.21 0.00 0.00 5.52
232 235 0.035317 GCATGGACCATCATCGCCTA 59.965 55.000 3.21 0.00 0.00 3.93
238 241 1.620819 GACCATCATCGCCTAGGTCAT 59.379 52.381 11.31 0.00 46.15 3.06
277 280 2.815211 GCTCATTCACGGCTCGCA 60.815 61.111 0.00 0.00 0.00 5.10
289 292 3.123620 CTCGCACTCAGCCAAGGC 61.124 66.667 2.02 2.02 41.38 4.35
301 304 1.078848 CCAAGGCTTCCCTGTCTCG 60.079 63.158 0.00 0.00 41.90 4.04
304 307 4.821589 GGCTTCCCTGTCTCGCGG 62.822 72.222 6.13 0.00 0.00 6.46
310 313 3.691342 CCTGTCTCGCGGTTGGGA 61.691 66.667 6.13 0.00 35.52 4.37
311 314 2.579201 CTGTCTCGCGGTTGGGAT 59.421 61.111 6.13 0.00 36.36 3.85
317 320 1.483004 TCTCGCGGTTGGGATAAATCA 59.517 47.619 6.13 0.00 36.36 2.57
318 321 1.597663 CTCGCGGTTGGGATAAATCAC 59.402 52.381 6.13 0.00 36.36 3.06
328 331 3.874543 TGGGATAAATCACAAATCGACCG 59.125 43.478 0.00 0.00 37.25 4.79
331 334 4.809426 GGATAAATCACAAATCGACCGACT 59.191 41.667 0.00 0.00 0.00 4.18
367 370 0.391130 TGAAACATTCTCTCGGCCCG 60.391 55.000 0.00 0.00 0.00 6.13
377 380 1.272490 CTCTCGGCCCGCATTATAGAA 59.728 52.381 0.00 0.00 0.00 2.10
385 388 4.109766 GCCCGCATTATAGAACCAAAAAC 58.890 43.478 0.00 0.00 0.00 2.43
428 431 1.336877 GTCGAAATTTTTCAGGCGCC 58.663 50.000 21.89 21.89 37.01 6.53
684 1495 8.589701 TTCCAAGTCTACTCATGTATGACTTA 57.410 34.615 18.02 8.02 40.63 2.24
772 1596 3.210074 ACCCCCATTCCACTCTACTCTAT 59.790 47.826 0.00 0.00 0.00 1.98
839 1683 2.742372 CACTCCTTTCGGCCGTGG 60.742 66.667 27.15 24.03 31.73 4.94
927 2466 3.168528 AACCACCACCGCACCTCT 61.169 61.111 0.00 0.00 0.00 3.69
933 2472 1.680651 CCACCGCACCTCTCTCTCT 60.681 63.158 0.00 0.00 0.00 3.10
1186 5999 2.945668 GTCCTAGGTACGTCCGTTACAT 59.054 50.000 9.08 0.00 41.99 2.29
1190 6003 0.248621 GGTACGTCCGTTACATCCGG 60.249 60.000 0.00 0.00 46.83 5.14
1193 6006 2.584143 GTCCGTTACATCCGGCCG 60.584 66.667 21.04 21.04 45.09 6.13
1208 6032 3.879682 CCGTCGTGCATGCATGGG 61.880 66.667 33.64 25.32 33.99 4.00
1216 6040 0.394080 TGCATGCATGGGTCGATGAA 60.394 50.000 27.34 0.00 0.00 2.57
1220 6057 3.004629 GCATGCATGGGTCGATGAAATTA 59.995 43.478 27.34 0.00 0.00 1.40
1221 6058 4.321452 GCATGCATGGGTCGATGAAATTAT 60.321 41.667 27.34 0.00 0.00 1.28
1231 6068 6.299604 GGTCGATGAAATTATGTATTCTGCG 58.700 40.000 0.00 0.00 0.00 5.18
1244 6081 0.793861 TTCTGCGTGCAAACGGATAC 59.206 50.000 0.00 0.00 32.11 2.24
1254 6107 3.632604 TGCAAACGGATACCAAGTTTTCA 59.367 39.130 0.00 0.00 36.12 2.69
1255 6108 4.279671 TGCAAACGGATACCAAGTTTTCAT 59.720 37.500 0.00 0.00 36.12 2.57
1258 6111 3.417101 ACGGATACCAAGTTTTCATGCA 58.583 40.909 0.00 0.00 0.00 3.96
1259 6112 4.016444 ACGGATACCAAGTTTTCATGCAT 58.984 39.130 0.00 0.00 0.00 3.96
1260 6113 4.142403 ACGGATACCAAGTTTTCATGCATG 60.142 41.667 21.07 21.07 0.00 4.06
1261 6114 4.114794 GGATACCAAGTTTTCATGCATGC 58.885 43.478 22.25 11.82 0.00 4.06
1262 6115 2.068837 ACCAAGTTTTCATGCATGCG 57.931 45.000 22.25 0.00 0.00 4.73
1263 6116 1.340889 ACCAAGTTTTCATGCATGCGT 59.659 42.857 22.25 10.53 0.00 5.24
1264 6117 1.722464 CCAAGTTTTCATGCATGCGTG 59.278 47.619 30.20 30.20 0.00 5.34
1265 6118 2.396601 CAAGTTTTCATGCATGCGTGT 58.603 42.857 33.08 15.68 34.75 4.49
1266 6119 2.796031 CAAGTTTTCATGCATGCGTGTT 59.204 40.909 33.08 20.12 34.75 3.32
1267 6120 3.096489 AGTTTTCATGCATGCGTGTTT 57.904 38.095 33.08 16.08 34.75 2.83
1268 6121 2.796031 AGTTTTCATGCATGCGTGTTTG 59.204 40.909 33.08 16.42 34.75 2.93
1269 6122 1.780806 TTTCATGCATGCGTGTTTGG 58.219 45.000 33.08 13.06 34.75 3.28
1542 6417 1.463056 CAACGACCGCAGCTTGATTTA 59.537 47.619 0.00 0.00 0.00 1.40
1544 6419 1.337823 ACGACCGCAGCTTGATTTACT 60.338 47.619 0.00 0.00 0.00 2.24
1545 6420 2.094390 ACGACCGCAGCTTGATTTACTA 60.094 45.455 0.00 0.00 0.00 1.82
1546 6421 2.927477 CGACCGCAGCTTGATTTACTAA 59.073 45.455 0.00 0.00 0.00 2.24
1614 6493 3.941188 AGGTGCCCGGTCAGTGTG 61.941 66.667 0.00 0.00 0.00 3.82
1627 6508 4.675933 CGGTCAGTGTGGTCGTATTGATTA 60.676 45.833 0.00 0.00 0.00 1.75
1708 6599 4.702131 GCCCTCTGTGATGATTTTGTACTT 59.298 41.667 0.00 0.00 0.00 2.24
1752 6649 1.173913 GGGACAATTGTTCTTCCGGG 58.826 55.000 16.48 0.00 0.00 5.73
1765 6662 2.817258 TCTTCCGGGTTTGCTATTTGTG 59.183 45.455 0.00 0.00 0.00 3.33
1767 6664 2.156098 TCCGGGTTTGCTATTTGTGAC 58.844 47.619 0.00 0.00 0.00 3.67
1771 6668 3.004315 CGGGTTTGCTATTTGTGACTTGT 59.996 43.478 0.00 0.00 0.00 3.16
1772 6669 4.298332 GGGTTTGCTATTTGTGACTTGTG 58.702 43.478 0.00 0.00 0.00 3.33
1773 6670 4.037446 GGGTTTGCTATTTGTGACTTGTGA 59.963 41.667 0.00 0.00 0.00 3.58
1775 6672 5.221048 GGTTTGCTATTTGTGACTTGTGAGT 60.221 40.000 0.00 0.00 39.32 3.41
1784 6681 2.047679 GACTTGTGAGTCGCGTAAGT 57.952 50.000 5.77 8.67 42.60 2.24
1788 6685 2.212869 TGTGAGTCGCGTAAGTTGTT 57.787 45.000 5.77 0.00 41.68 2.83
1790 6687 2.931325 TGTGAGTCGCGTAAGTTGTTTT 59.069 40.909 5.77 0.00 41.68 2.43
1791 6688 3.371591 TGTGAGTCGCGTAAGTTGTTTTT 59.628 39.130 5.77 0.00 41.68 1.94
1811 6719 2.363018 CTCAGAGAGACCGGGCCA 60.363 66.667 1.76 0.00 0.00 5.36
1816 6724 0.261991 AGAGAGACCGGGCCAAGATA 59.738 55.000 1.76 0.00 0.00 1.98
1820 6728 0.617820 AGACCGGGCCAAGATACAGT 60.618 55.000 1.76 0.00 0.00 3.55
1825 6733 1.090052 GGGCCAAGATACAGTGTCGC 61.090 60.000 4.39 0.00 0.00 5.19
1827 6735 1.090052 GCCAAGATACAGTGTCGCCC 61.090 60.000 0.00 0.00 0.00 6.13
1828 6736 0.462047 CCAAGATACAGTGTCGCCCC 60.462 60.000 0.00 0.00 0.00 5.80
1829 6737 0.806102 CAAGATACAGTGTCGCCCCG 60.806 60.000 0.00 0.00 0.00 5.73
1830 6738 1.255667 AAGATACAGTGTCGCCCCGT 61.256 55.000 0.00 0.00 0.00 5.28
1831 6739 1.518572 GATACAGTGTCGCCCCGTG 60.519 63.158 0.00 0.00 0.00 4.94
1832 6740 1.940883 GATACAGTGTCGCCCCGTGA 61.941 60.000 0.00 0.00 0.00 4.35
1834 6742 3.680786 CAGTGTCGCCCCGTGAGA 61.681 66.667 0.00 0.00 0.00 3.27
1836 6744 1.379443 AGTGTCGCCCCGTGAGATA 60.379 57.895 0.00 0.00 0.00 1.98
1837 6745 1.065928 GTGTCGCCCCGTGAGATAG 59.934 63.158 0.00 0.00 0.00 2.08
1838 6746 2.027751 GTCGCCCCGTGAGATAGC 59.972 66.667 0.00 0.00 0.00 2.97
1839 6747 2.441348 TCGCCCCGTGAGATAGCA 60.441 61.111 0.00 0.00 0.00 3.49
1840 6748 2.279517 CGCCCCGTGAGATAGCAC 60.280 66.667 0.00 0.00 35.46 4.40
1848 6756 1.015109 GTGAGATAGCACGACGGAGA 58.985 55.000 0.00 0.00 0.00 3.71
1849 6757 1.015109 TGAGATAGCACGACGGAGAC 58.985 55.000 0.00 0.00 0.00 3.36
1862 6770 3.588277 GGAGACGACAACTCAAGCA 57.412 52.632 0.00 0.00 36.26 3.91
1864 6772 1.000163 GGAGACGACAACTCAAGCAGA 60.000 52.381 0.00 0.00 36.26 4.26
1878 6786 5.407407 TCAAGCAGAGTAGGAAAAGTAGG 57.593 43.478 0.00 0.00 0.00 3.18
1879 6787 3.897141 AGCAGAGTAGGAAAAGTAGGC 57.103 47.619 0.00 0.00 0.00 3.93
1880 6788 2.166664 AGCAGAGTAGGAAAAGTAGGCG 59.833 50.000 0.00 0.00 0.00 5.52
1881 6789 2.738964 GCAGAGTAGGAAAAGTAGGCGG 60.739 54.545 0.00 0.00 0.00 6.13
1882 6790 1.481363 AGAGTAGGAAAAGTAGGCGGC 59.519 52.381 0.00 0.00 0.00 6.53
1883 6791 1.206371 GAGTAGGAAAAGTAGGCGGCA 59.794 52.381 13.08 0.00 0.00 5.69
1884 6792 1.207329 AGTAGGAAAAGTAGGCGGCAG 59.793 52.381 13.08 0.00 0.00 4.85
1896 6804 2.259204 CGGCAGCACCCAACATTG 59.741 61.111 0.00 0.00 33.26 2.82
1909 8041 1.063616 CAACATTGGAGCTGCTCATCG 59.936 52.381 28.95 16.72 31.08 3.84
1916 8048 3.034923 GCTGCTCATCGGCTAGCG 61.035 66.667 9.00 4.38 43.74 4.26
1917 8049 2.724377 CTGCTCATCGGCTAGCGA 59.276 61.111 9.00 10.08 41.77 4.93
1920 8052 1.663074 GCTCATCGGCTAGCGAAGG 60.663 63.158 9.00 0.65 0.00 3.46
1927 8059 1.002502 GGCTAGCGAAGGTGGGTTT 60.003 57.895 9.00 0.00 40.22 3.27
1930 8062 1.156736 CTAGCGAAGGTGGGTTTGTG 58.843 55.000 0.00 0.00 40.22 3.33
1931 8063 0.887387 TAGCGAAGGTGGGTTTGTGC 60.887 55.000 0.00 0.00 40.22 4.57
1933 8886 1.654220 CGAAGGTGGGTTTGTGCAG 59.346 57.895 0.00 0.00 0.00 4.41
1937 8890 2.200373 AGGTGGGTTTGTGCAGATAC 57.800 50.000 0.00 0.00 0.00 2.24
1938 8891 0.802494 GGTGGGTTTGTGCAGATACG 59.198 55.000 0.00 0.00 0.00 3.06
1939 8892 1.519408 GTGGGTTTGTGCAGATACGT 58.481 50.000 0.00 0.00 0.00 3.57
1942 8895 3.068560 TGGGTTTGTGCAGATACGTTAC 58.931 45.455 0.00 0.00 0.00 2.50
1944 8897 2.733026 GGTTTGTGCAGATACGTTACGT 59.267 45.455 16.31 16.31 44.35 3.57
1946 8899 4.385447 GGTTTGTGCAGATACGTTACGTAA 59.615 41.667 21.39 3.29 45.39 3.18
1952 8905 6.005289 GTGCAGATACGTTACGTAAAACTTG 58.995 40.000 21.39 14.80 45.39 3.16
1954 8907 5.445010 GCAGATACGTTACGTAAAACTTGGG 60.445 44.000 21.39 10.29 45.39 4.12
1955 8908 5.634859 CAGATACGTTACGTAAAACTTGGGT 59.365 40.000 21.39 1.60 45.39 4.51
1956 8909 5.863935 AGATACGTTACGTAAAACTTGGGTC 59.136 40.000 21.39 10.84 45.39 4.46
1960 8913 4.129380 GTTACGTAAAACTTGGGTCAGGT 58.871 43.478 10.11 0.00 0.00 4.00
1964 8917 4.285260 ACGTAAAACTTGGGTCAGGTATCT 59.715 41.667 0.00 0.00 0.00 1.98
1965 8918 4.630069 CGTAAAACTTGGGTCAGGTATCTG 59.370 45.833 0.00 0.00 42.21 2.90
1966 8919 2.789409 AACTTGGGTCAGGTATCTGC 57.211 50.000 0.00 0.00 40.69 4.26
1967 8920 0.912486 ACTTGGGTCAGGTATCTGCC 59.088 55.000 0.00 2.99 40.69 4.85
1968 8921 0.911769 CTTGGGTCAGGTATCTGCCA 59.088 55.000 15.52 8.20 40.69 4.92
1970 8923 0.042581 TGGGTCAGGTATCTGCCAGA 59.957 55.000 15.52 0.00 40.69 3.86
1972 8925 1.771255 GGGTCAGGTATCTGCCAGATT 59.229 52.381 13.32 0.00 40.69 2.40
1974 8927 2.171448 GGTCAGGTATCTGCCAGATTGT 59.829 50.000 13.32 0.00 40.69 2.71
1975 8928 3.388024 GGTCAGGTATCTGCCAGATTGTA 59.612 47.826 13.32 0.00 40.69 2.41
1976 8929 4.040952 GGTCAGGTATCTGCCAGATTGTAT 59.959 45.833 13.32 0.00 40.69 2.29
1977 8930 5.455326 GGTCAGGTATCTGCCAGATTGTATT 60.455 44.000 13.32 0.00 40.69 1.89
1978 8931 6.058183 GTCAGGTATCTGCCAGATTGTATTT 58.942 40.000 13.32 0.00 40.69 1.40
1979 8932 6.017605 GTCAGGTATCTGCCAGATTGTATTTG 60.018 42.308 13.32 4.17 40.69 2.32
1980 8933 6.057533 CAGGTATCTGCCAGATTGTATTTGA 58.942 40.000 13.32 0.00 36.20 2.69
1981 8934 6.204301 CAGGTATCTGCCAGATTGTATTTGAG 59.796 42.308 13.32 0.00 36.20 3.02
1982 8935 6.100279 AGGTATCTGCCAGATTGTATTTGAGA 59.900 38.462 13.32 0.00 36.20 3.27
1983 8936 6.939163 GGTATCTGCCAGATTGTATTTGAGAT 59.061 38.462 13.32 0.00 36.20 2.75
1984 8937 6.879276 ATCTGCCAGATTGTATTTGAGATG 57.121 37.500 0.08 0.00 28.69 2.90
1985 8938 5.748402 TCTGCCAGATTGTATTTGAGATGT 58.252 37.500 0.00 0.00 0.00 3.06
1986 8939 6.182627 TCTGCCAGATTGTATTTGAGATGTT 58.817 36.000 0.00 0.00 0.00 2.71
1988 8941 7.496920 TCTGCCAGATTGTATTTGAGATGTTAG 59.503 37.037 0.00 0.00 0.00 2.34
1989 8942 7.337938 TGCCAGATTGTATTTGAGATGTTAGA 58.662 34.615 0.00 0.00 0.00 2.10
1990 8943 7.280876 TGCCAGATTGTATTTGAGATGTTAGAC 59.719 37.037 0.00 0.00 0.00 2.59
1991 8944 7.497249 GCCAGATTGTATTTGAGATGTTAGACT 59.503 37.037 0.00 0.00 0.00 3.24
1993 8946 8.750416 CAGATTGTATTTGAGATGTTAGACTCG 58.250 37.037 0.00 0.00 36.11 4.18
1996 8949 7.348080 TGTATTTGAGATGTTAGACTCGGAT 57.652 36.000 0.00 0.00 36.11 4.18
1997 8950 7.426410 TGTATTTGAGATGTTAGACTCGGATC 58.574 38.462 0.00 0.00 36.11 3.36
1999 8952 3.542648 TGAGATGTTAGACTCGGATCGT 58.457 45.455 0.00 0.00 36.11 3.73
2000 8953 3.312697 TGAGATGTTAGACTCGGATCGTG 59.687 47.826 0.00 0.00 36.11 4.35
2001 8954 2.033550 AGATGTTAGACTCGGATCGTGC 59.966 50.000 0.00 0.00 0.00 5.34
2002 8955 0.454600 TGTTAGACTCGGATCGTGCC 59.545 55.000 0.00 0.00 0.00 5.01
2010 8963 2.046700 GGATCGTGCCGGGTTCAA 60.047 61.111 2.18 0.00 0.00 2.69
2011 8964 2.396157 GGATCGTGCCGGGTTCAAC 61.396 63.158 2.18 0.00 0.00 3.18
2012 8965 2.736682 GATCGTGCCGGGTTCAACG 61.737 63.158 2.18 1.74 0.00 4.10
2013 8966 3.229156 ATCGTGCCGGGTTCAACGA 62.229 57.895 2.18 15.11 0.00 3.85
2014 8967 2.718747 ATCGTGCCGGGTTCAACGAA 62.719 55.000 16.18 5.13 33.34 3.85
2016 8969 1.015085 CGTGCCGGGTTCAACGAATA 61.015 55.000 2.18 0.00 0.00 1.75
2019 8972 2.030981 GTGCCGGGTTCAACGAATAAAA 60.031 45.455 2.18 0.00 0.00 1.52
2020 8973 2.030981 TGCCGGGTTCAACGAATAAAAC 60.031 45.455 2.18 0.00 0.00 2.43
2032 9071 5.128992 ACGAATAAAACACAACCCATTCC 57.871 39.130 0.00 0.00 0.00 3.01
2034 9073 5.160641 CGAATAAAACACAACCCATTCCAG 58.839 41.667 0.00 0.00 0.00 3.86
2035 9074 2.908688 AAAACACAACCCATTCCAGC 57.091 45.000 0.00 0.00 0.00 4.85
2036 9075 2.086610 AAACACAACCCATTCCAGCT 57.913 45.000 0.00 0.00 0.00 4.24
2037 9076 2.969821 AACACAACCCATTCCAGCTA 57.030 45.000 0.00 0.00 0.00 3.32
2038 9077 2.969821 ACACAACCCATTCCAGCTAA 57.030 45.000 0.00 0.00 0.00 3.09
2039 9078 3.237268 ACACAACCCATTCCAGCTAAA 57.763 42.857 0.00 0.00 0.00 1.85
2040 9079 3.571590 ACACAACCCATTCCAGCTAAAA 58.428 40.909 0.00 0.00 0.00 1.52
2070 9619 0.609662 TTTTTACTCCCTCCGTCCGG 59.390 55.000 0.00 0.00 0.00 5.14
2071 9620 0.251742 TTTTACTCCCTCCGTCCGGA 60.252 55.000 0.00 0.00 42.90 5.14
2072 9621 0.251742 TTTACTCCCTCCGTCCGGAA 60.252 55.000 5.23 0.00 44.66 4.30
2074 9623 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
2076 9625 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
2077 9626 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
2078 9627 0.388294 CCCTCCGTCCGGAAATACTC 59.612 60.000 5.23 0.00 44.66 2.59
2079 9628 0.030369 CCTCCGTCCGGAAATACTCG 59.970 60.000 5.23 3.90 44.66 4.18
2081 9630 0.734889 TCCGTCCGGAAATACTCGTC 59.265 55.000 5.23 0.00 42.05 4.20
2084 9633 1.202065 CGTCCGGAAATACTCGTCGAA 60.202 52.381 5.23 0.00 0.00 3.71
2085 9634 2.448219 GTCCGGAAATACTCGTCGAAG 58.552 52.381 5.23 0.00 0.00 3.79
2086 9635 2.096496 GTCCGGAAATACTCGTCGAAGA 59.904 50.000 5.23 0.03 0.00 2.87
2087 9636 2.749076 TCCGGAAATACTCGTCGAAGAA 59.251 45.455 0.00 0.00 39.69 2.52
2088 9637 3.191162 TCCGGAAATACTCGTCGAAGAAA 59.809 43.478 0.00 0.00 39.69 2.52
2089 9638 4.110482 CCGGAAATACTCGTCGAAGAAAT 58.890 43.478 0.00 0.00 39.69 2.17
2090 9639 4.026804 CCGGAAATACTCGTCGAAGAAATG 60.027 45.833 0.00 0.00 39.69 2.32
2091 9640 4.026804 CGGAAATACTCGTCGAAGAAATGG 60.027 45.833 1.95 0.00 39.69 3.16
2092 9641 5.107133 GGAAATACTCGTCGAAGAAATGGA 58.893 41.667 1.95 0.00 39.69 3.41
2093 9642 5.753921 GGAAATACTCGTCGAAGAAATGGAT 59.246 40.000 1.95 0.00 39.69 3.41
2094 9643 6.292381 GGAAATACTCGTCGAAGAAATGGATG 60.292 42.308 1.95 0.00 39.69 3.51
2095 9644 3.594603 ACTCGTCGAAGAAATGGATGT 57.405 42.857 1.95 0.00 39.69 3.06
2097 9646 5.263968 ACTCGTCGAAGAAATGGATGTAT 57.736 39.130 1.95 0.00 39.69 2.29
2099 9648 5.067936 ACTCGTCGAAGAAATGGATGTATCT 59.932 40.000 1.95 0.00 39.69 1.98
2101 9650 6.669278 TCGTCGAAGAAATGGATGTATCTAG 58.331 40.000 0.00 0.00 39.69 2.43
2103 9652 7.175119 TCGTCGAAGAAATGGATGTATCTAGAT 59.825 37.037 10.73 10.73 39.69 1.98
2104 9653 7.272299 CGTCGAAGAAATGGATGTATCTAGATG 59.728 40.741 15.79 0.00 39.69 2.90
2105 9654 8.085296 GTCGAAGAAATGGATGTATCTAGATGT 58.915 37.037 15.79 1.25 39.69 3.06
2106 9655 9.297037 TCGAAGAAATGGATGTATCTAGATGTA 57.703 33.333 15.79 4.44 0.00 2.29
2136 9685 8.894768 AGTTCTAGGTACATTCATTTCTATGC 57.105 34.615 0.00 0.00 0.00 3.14
2137 9686 8.486210 AGTTCTAGGTACATTCATTTCTATGCA 58.514 33.333 0.00 0.00 0.00 3.96
2138 9687 9.277783 GTTCTAGGTACATTCATTTCTATGCAT 57.722 33.333 3.79 3.79 0.00 3.96
2145 9694 7.606858 ACATTCATTTCTATGCATATCTCCG 57.393 36.000 6.92 0.00 0.00 4.63
2146 9695 7.389232 ACATTCATTTCTATGCATATCTCCGA 58.611 34.615 6.92 0.00 0.00 4.55
2147 9696 7.332926 ACATTCATTTCTATGCATATCTCCGAC 59.667 37.037 6.92 0.00 0.00 4.79
2148 9697 6.345096 TCATTTCTATGCATATCTCCGACA 57.655 37.500 6.92 0.00 0.00 4.35
2149 9698 6.758254 TCATTTCTATGCATATCTCCGACAA 58.242 36.000 6.92 0.00 0.00 3.18
2150 9699 6.870439 TCATTTCTATGCATATCTCCGACAAG 59.130 38.462 6.92 0.00 0.00 3.16
2152 9701 6.894339 TTCTATGCATATCTCCGACAAGTA 57.106 37.500 6.92 0.00 0.00 2.24
2153 9702 7.468141 TTCTATGCATATCTCCGACAAGTAT 57.532 36.000 6.92 0.00 0.00 2.12
2154 9703 7.468141 TCTATGCATATCTCCGACAAGTATT 57.532 36.000 6.92 0.00 0.00 1.89
2155 9704 7.896811 TCTATGCATATCTCCGACAAGTATTT 58.103 34.615 6.92 0.00 0.00 1.40
2156 9705 8.029522 TCTATGCATATCTCCGACAAGTATTTC 58.970 37.037 6.92 0.00 0.00 2.17
2157 9706 5.297547 TGCATATCTCCGACAAGTATTTCC 58.702 41.667 0.00 0.00 0.00 3.13
2158 9707 4.386049 GCATATCTCCGACAAGTATTTCCG 59.614 45.833 0.00 0.00 0.00 4.30
2159 9708 2.953466 TCTCCGACAAGTATTTCCGG 57.047 50.000 0.00 0.00 41.36 5.14
2161 9710 2.165030 TCTCCGACAAGTATTTCCGGAC 59.835 50.000 1.83 0.00 43.47 4.79
2162 9711 1.135315 TCCGACAAGTATTTCCGGACG 60.135 52.381 1.83 0.00 43.47 4.79
2163 9712 1.274596 CGACAAGTATTTCCGGACGG 58.725 55.000 1.83 3.96 0.00 4.79
2165 9714 2.537401 GACAAGTATTTCCGGACGGAG 58.463 52.381 13.64 3.15 46.06 4.63
2166 9715 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
2167 9716 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
2168 9717 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
2169 9718 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
2171 9720 0.032813 ATTTCCGGACGGAGGGAGTA 60.033 55.000 13.64 0.00 46.06 2.59
2172 9721 0.682209 TTTCCGGACGGAGGGAGTAG 60.682 60.000 13.64 0.00 46.06 2.57
2174 9723 1.379576 CCGGACGGAGGGAGTAGTT 60.380 63.158 4.40 0.00 37.50 2.24
2175 9724 1.664321 CCGGACGGAGGGAGTAGTTG 61.664 65.000 4.40 0.00 37.50 3.16
2176 9725 0.964358 CGGACGGAGGGAGTAGTTGT 60.964 60.000 0.00 0.00 0.00 3.32
2178 9727 2.450476 GGACGGAGGGAGTAGTTGTTA 58.550 52.381 0.00 0.00 0.00 2.41
2180 9729 3.087781 GACGGAGGGAGTAGTTGTTAGT 58.912 50.000 0.00 0.00 0.00 2.24
2182 9731 4.268359 ACGGAGGGAGTAGTTGTTAGTAG 58.732 47.826 0.00 0.00 0.00 2.57
2183 9732 3.066481 CGGAGGGAGTAGTTGTTAGTAGC 59.934 52.174 0.00 0.00 0.00 3.58
2185 9734 4.650131 GGAGGGAGTAGTTGTTAGTAGCAT 59.350 45.833 0.00 0.00 0.00 3.79
2186 9735 5.832060 GGAGGGAGTAGTTGTTAGTAGCATA 59.168 44.000 0.00 0.00 0.00 3.14
2187 9736 6.494146 GGAGGGAGTAGTTGTTAGTAGCATAT 59.506 42.308 0.00 0.00 0.00 1.78
2188 9737 7.015389 GGAGGGAGTAGTTGTTAGTAGCATATT 59.985 40.741 0.00 0.00 0.00 1.28
2189 9738 9.075678 GAGGGAGTAGTTGTTAGTAGCATATTA 57.924 37.037 0.00 0.00 0.00 0.98
2190 9739 9.603189 AGGGAGTAGTTGTTAGTAGCATATTAT 57.397 33.333 0.00 0.00 0.00 1.28
2253 9802 6.942532 AAAAGTGTTTTAGCTGAGATGACA 57.057 33.333 0.00 0.00 0.00 3.58
2254 9803 7.516198 AAAAGTGTTTTAGCTGAGATGACAT 57.484 32.000 0.00 0.00 0.00 3.06
2255 9804 7.516198 AAAGTGTTTTAGCTGAGATGACATT 57.484 32.000 0.00 0.00 0.00 2.71
2256 9805 6.492007 AGTGTTTTAGCTGAGATGACATTG 57.508 37.500 0.00 0.00 0.00 2.82
2257 9806 6.000219 AGTGTTTTAGCTGAGATGACATTGT 59.000 36.000 0.00 0.00 0.00 2.71
2258 9807 6.488006 AGTGTTTTAGCTGAGATGACATTGTT 59.512 34.615 0.00 0.00 0.00 2.83
2260 9809 6.712095 TGTTTTAGCTGAGATGACATTGTTCT 59.288 34.615 0.00 0.00 0.00 3.01
2262 9811 3.519579 AGCTGAGATGACATTGTTCTCG 58.480 45.455 11.86 8.81 38.97 4.04
2263 9812 2.606725 GCTGAGATGACATTGTTCTCGG 59.393 50.000 17.55 17.55 42.99 4.63
2264 9813 3.854666 CTGAGATGACATTGTTCTCGGT 58.145 45.455 15.05 0.00 38.97 4.69
2267 9816 5.063204 TGAGATGACATTGTTCTCGGTTTT 58.937 37.500 11.86 0.00 38.97 2.43
2268 9817 5.530915 TGAGATGACATTGTTCTCGGTTTTT 59.469 36.000 11.86 0.00 38.97 1.94
2337 10046 2.135664 GCATGGGCGTACTACTAGTG 57.864 55.000 5.39 0.00 0.00 2.74
2338 10047 1.407979 GCATGGGCGTACTACTAGTGT 59.592 52.381 5.39 4.48 0.00 3.55
2339 10048 2.159142 GCATGGGCGTACTACTAGTGTT 60.159 50.000 5.39 0.00 0.00 3.32
2340 10049 3.677976 GCATGGGCGTACTACTAGTGTTT 60.678 47.826 5.39 0.00 0.00 2.83
2341 10050 3.581024 TGGGCGTACTACTAGTGTTTG 57.419 47.619 5.39 0.00 0.00 2.93
2342 10051 2.892852 TGGGCGTACTACTAGTGTTTGT 59.107 45.455 5.39 2.04 0.00 2.83
2343 10052 4.078537 TGGGCGTACTACTAGTGTTTGTA 58.921 43.478 5.39 1.08 0.00 2.41
2344 10053 4.082787 TGGGCGTACTACTAGTGTTTGTAC 60.083 45.833 5.39 11.69 34.60 2.90
2346 10055 4.378459 GGCGTACTACTAGTGTTTGTACGT 60.378 45.833 29.85 0.00 46.67 3.57
2347 10056 4.551126 GCGTACTACTAGTGTTTGTACGTG 59.449 45.833 29.85 17.52 46.67 4.49
2348 10057 5.082059 CGTACTACTAGTGTTTGTACGTGG 58.918 45.833 26.11 12.28 43.94 4.94
2349 10058 4.510038 ACTACTAGTGTTTGTACGTGGG 57.490 45.455 5.39 0.00 0.00 4.61
2350 10059 2.825861 ACTAGTGTTTGTACGTGGGG 57.174 50.000 0.00 0.00 0.00 4.96
2351 10060 2.318908 ACTAGTGTTTGTACGTGGGGA 58.681 47.619 0.00 0.00 0.00 4.81
2352 10061 2.298163 ACTAGTGTTTGTACGTGGGGAG 59.702 50.000 0.00 0.00 0.00 4.30
2353 10062 0.395312 AGTGTTTGTACGTGGGGAGG 59.605 55.000 0.00 0.00 0.00 4.30
2354 10063 0.393820 GTGTTTGTACGTGGGGAGGA 59.606 55.000 0.00 0.00 0.00 3.71
2355 10064 1.129917 TGTTTGTACGTGGGGAGGAA 58.870 50.000 0.00 0.00 0.00 3.36
2356 10065 1.489649 TGTTTGTACGTGGGGAGGAAA 59.510 47.619 0.00 0.00 0.00 3.13
2357 10066 2.148768 GTTTGTACGTGGGGAGGAAAG 58.851 52.381 0.00 0.00 0.00 2.62
2358 10067 1.719529 TTGTACGTGGGGAGGAAAGA 58.280 50.000 0.00 0.00 0.00 2.52
2359 10068 1.719529 TGTACGTGGGGAGGAAAGAA 58.280 50.000 0.00 0.00 0.00 2.52
2360 10069 1.621814 TGTACGTGGGGAGGAAAGAAG 59.378 52.381 0.00 0.00 0.00 2.85
2361 10070 1.897802 GTACGTGGGGAGGAAAGAAGA 59.102 52.381 0.00 0.00 0.00 2.87
2362 10071 1.430992 ACGTGGGGAGGAAAGAAGAA 58.569 50.000 0.00 0.00 0.00 2.52
2363 10072 1.071857 ACGTGGGGAGGAAAGAAGAAC 59.928 52.381 0.00 0.00 0.00 3.01
2364 10073 1.809684 GTGGGGAGGAAAGAAGAACG 58.190 55.000 0.00 0.00 0.00 3.95
2365 10074 0.690762 TGGGGAGGAAAGAAGAACGG 59.309 55.000 0.00 0.00 0.00 4.44
2366 10075 0.035343 GGGGAGGAAAGAAGAACGGG 60.035 60.000 0.00 0.00 0.00 5.28
2367 10076 0.691332 GGGAGGAAAGAAGAACGGGT 59.309 55.000 0.00 0.00 0.00 5.28
2368 10077 1.610886 GGGAGGAAAGAAGAACGGGTG 60.611 57.143 0.00 0.00 0.00 4.61
2369 10078 1.346722 GGAGGAAAGAAGAACGGGTGA 59.653 52.381 0.00 0.00 0.00 4.02
2370 10079 2.613223 GGAGGAAAGAAGAACGGGTGAG 60.613 54.545 0.00 0.00 0.00 3.51
2371 10080 2.037381 GAGGAAAGAAGAACGGGTGAGT 59.963 50.000 0.00 0.00 0.00 3.41
2372 10081 2.037381 AGGAAAGAAGAACGGGTGAGTC 59.963 50.000 0.00 0.00 0.00 3.36
2373 10082 2.224209 GGAAAGAAGAACGGGTGAGTCA 60.224 50.000 0.00 0.00 0.00 3.41
2374 10083 3.557264 GGAAAGAAGAACGGGTGAGTCAT 60.557 47.826 0.00 0.00 0.00 3.06
2375 10084 2.751166 AGAAGAACGGGTGAGTCATG 57.249 50.000 0.00 0.00 0.00 3.07
2376 10085 1.971357 AGAAGAACGGGTGAGTCATGT 59.029 47.619 0.00 0.00 0.00 3.21
2377 10086 2.368875 AGAAGAACGGGTGAGTCATGTT 59.631 45.455 0.00 1.97 0.00 2.71
2378 10087 2.169832 AGAACGGGTGAGTCATGTTG 57.830 50.000 11.59 0.00 0.00 3.33
2379 10088 1.156736 GAACGGGTGAGTCATGTTGG 58.843 55.000 11.59 0.00 0.00 3.77
2380 10089 0.250727 AACGGGTGAGTCATGTTGGG 60.251 55.000 0.00 0.00 0.00 4.12
2381 10090 1.377202 CGGGTGAGTCATGTTGGGG 60.377 63.158 0.00 0.00 0.00 4.96
2382 10091 1.836999 CGGGTGAGTCATGTTGGGGA 61.837 60.000 0.00 0.00 0.00 4.81
2383 10092 0.404040 GGGTGAGTCATGTTGGGGAA 59.596 55.000 0.00 0.00 0.00 3.97
2384 10093 1.614317 GGGTGAGTCATGTTGGGGAAG 60.614 57.143 0.00 0.00 0.00 3.46
2385 10094 1.614317 GGTGAGTCATGTTGGGGAAGG 60.614 57.143 0.00 0.00 0.00 3.46
2386 10095 1.351017 GTGAGTCATGTTGGGGAAGGA 59.649 52.381 0.00 0.00 0.00 3.36
2387 10096 1.630369 TGAGTCATGTTGGGGAAGGAG 59.370 52.381 0.00 0.00 0.00 3.69
2388 10097 1.909302 GAGTCATGTTGGGGAAGGAGA 59.091 52.381 0.00 0.00 0.00 3.71
2389 10098 2.305927 GAGTCATGTTGGGGAAGGAGAA 59.694 50.000 0.00 0.00 0.00 2.87
2390 10099 2.040412 AGTCATGTTGGGGAAGGAGAAC 59.960 50.000 0.00 0.00 0.00 3.01
2391 10100 2.061848 TCATGTTGGGGAAGGAGAACA 58.938 47.619 0.00 0.00 33.09 3.18
2392 10101 2.040278 TCATGTTGGGGAAGGAGAACAG 59.960 50.000 0.00 0.00 32.12 3.16
2393 10102 1.518367 TGTTGGGGAAGGAGAACAGT 58.482 50.000 0.00 0.00 0.00 3.55
2394 10103 1.142870 TGTTGGGGAAGGAGAACAGTG 59.857 52.381 0.00 0.00 0.00 3.66
2395 10104 0.771127 TTGGGGAAGGAGAACAGTGG 59.229 55.000 0.00 0.00 0.00 4.00
2396 10105 1.002011 GGGGAAGGAGAACAGTGGC 60.002 63.158 0.00 0.00 0.00 5.01
2397 10106 1.376037 GGGAAGGAGAACAGTGGCG 60.376 63.158 0.00 0.00 0.00 5.69
2398 10107 2.035442 GGAAGGAGAACAGTGGCGC 61.035 63.158 0.00 0.00 0.00 6.53
2399 10108 2.357517 AAGGAGAACAGTGGCGCG 60.358 61.111 0.00 0.00 0.00 6.86
2400 10109 3.165160 AAGGAGAACAGTGGCGCGT 62.165 57.895 8.43 0.00 0.00 6.01
2401 10110 3.112709 GGAGAACAGTGGCGCGTC 61.113 66.667 2.29 2.29 0.00 5.19
2402 10111 2.049063 GAGAACAGTGGCGCGTCT 60.049 61.111 13.81 1.80 0.00 4.18
2403 10112 1.211969 GAGAACAGTGGCGCGTCTA 59.788 57.895 13.81 0.00 0.00 2.59
2404 10113 0.179134 GAGAACAGTGGCGCGTCTAT 60.179 55.000 13.81 0.00 0.00 1.98
2405 10114 1.065102 GAGAACAGTGGCGCGTCTATA 59.935 52.381 13.81 0.00 0.00 1.31
2406 10115 1.197910 GAACAGTGGCGCGTCTATAC 58.802 55.000 13.81 0.88 0.00 1.47
2407 10116 0.528924 AACAGTGGCGCGTCTATACA 59.471 50.000 13.81 0.00 0.00 2.29
2408 10117 0.744874 ACAGTGGCGCGTCTATACAT 59.255 50.000 13.81 0.00 0.00 2.29
2409 10118 1.269102 ACAGTGGCGCGTCTATACATC 60.269 52.381 13.81 0.00 0.00 3.06
2410 10119 0.040336 AGTGGCGCGTCTATACATCG 60.040 55.000 13.81 0.00 0.00 3.84
2411 10120 1.371267 TGGCGCGTCTATACATCGC 60.371 57.895 13.81 6.41 42.79 4.58
2412 10121 3.449042 GCGCGTCTATACATCGCC 58.551 61.111 8.43 0.00 45.85 5.54
2413 10122 1.081376 GCGCGTCTATACATCGCCT 60.081 57.895 8.43 0.00 45.85 5.52
2414 10123 1.066114 GCGCGTCTATACATCGCCTC 61.066 60.000 8.43 0.00 45.85 4.70
2415 10124 0.789753 CGCGTCTATACATCGCCTCG 60.790 60.000 0.00 0.00 45.85 4.63
2416 10125 1.066114 GCGTCTATACATCGCCTCGC 61.066 60.000 0.00 0.00 43.41 5.03
2417 10126 0.237498 CGTCTATACATCGCCTCGCA 59.763 55.000 0.00 0.00 0.00 5.10
2418 10127 1.687628 GTCTATACATCGCCTCGCAC 58.312 55.000 0.00 0.00 0.00 5.34
2419 10128 0.237498 TCTATACATCGCCTCGCACG 59.763 55.000 0.00 0.00 0.00 5.34
2420 10129 0.237498 CTATACATCGCCTCGCACGA 59.763 55.000 0.00 0.00 44.75 4.35
2421 10130 0.237498 TATACATCGCCTCGCACGAG 59.763 55.000 13.02 13.02 43.74 4.18
2422 10131 1.725557 ATACATCGCCTCGCACGAGT 61.726 55.000 17.94 2.81 43.74 4.18
2423 10132 1.929806 TACATCGCCTCGCACGAGTT 61.930 55.000 17.94 0.00 43.74 3.01
2424 10133 2.202623 ATCGCCTCGCACGAGTTC 60.203 61.111 17.94 8.93 43.74 3.01
2425 10134 4.753877 TCGCCTCGCACGAGTTCG 62.754 66.667 17.94 18.65 46.33 3.95
2426 10135 4.753877 CGCCTCGCACGAGTTCGA 62.754 66.667 20.03 0.00 43.02 3.71
2427 10136 2.430244 GCCTCGCACGAGTTCGAA 60.430 61.111 17.94 0.00 43.02 3.71
2428 10137 1.805945 GCCTCGCACGAGTTCGAAT 60.806 57.895 17.94 0.00 43.02 3.34
2429 10138 1.991430 CCTCGCACGAGTTCGAATG 59.009 57.895 17.94 0.00 43.02 2.67
2430 10139 0.732880 CCTCGCACGAGTTCGAATGT 60.733 55.000 17.94 0.00 43.02 2.71
2431 10140 1.060713 CTCGCACGAGTTCGAATGTT 58.939 50.000 11.82 0.00 43.02 2.71
2432 10141 0.781787 TCGCACGAGTTCGAATGTTG 59.218 50.000 8.72 0.00 43.02 3.33
2433 10142 0.785708 CGCACGAGTTCGAATGTTGC 60.786 55.000 8.72 7.47 43.02 4.17
2434 10143 0.234625 GCACGAGTTCGAATGTTGCA 59.765 50.000 8.72 0.00 43.02 4.08
2435 10144 1.135972 GCACGAGTTCGAATGTTGCAT 60.136 47.619 8.72 0.00 43.02 3.96
2436 10145 2.762472 CACGAGTTCGAATGTTGCATC 58.238 47.619 8.72 0.00 43.02 3.91
2437 10146 1.390123 ACGAGTTCGAATGTTGCATCG 59.610 47.619 8.72 0.98 43.02 3.84
2438 10147 1.653609 CGAGTTCGAATGTTGCATCGA 59.346 47.619 6.05 6.05 45.48 3.59
2439 10148 2.532973 CGAGTTCGAATGTTGCATCGAC 60.533 50.000 9.52 5.94 46.65 4.20
2440 10149 1.732259 AGTTCGAATGTTGCATCGACC 59.268 47.619 9.52 3.40 46.65 4.79
2441 10150 1.732259 GTTCGAATGTTGCATCGACCT 59.268 47.619 9.52 0.00 46.65 3.85
2442 10151 2.927477 GTTCGAATGTTGCATCGACCTA 59.073 45.455 9.52 0.00 46.65 3.08
2443 10152 2.536365 TCGAATGTTGCATCGACCTAC 58.464 47.619 6.05 0.00 42.61 3.18
2444 10153 2.094442 TCGAATGTTGCATCGACCTACA 60.094 45.455 6.05 0.00 42.61 2.74
2445 10154 2.670905 CGAATGTTGCATCGACCTACAA 59.329 45.455 1.16 0.00 41.43 2.41
2446 10155 3.483574 CGAATGTTGCATCGACCTACAAC 60.484 47.826 1.16 12.30 41.43 3.32
2447 10156 1.424403 TGTTGCATCGACCTACAACG 58.576 50.000 13.59 0.00 44.13 4.10
2448 10157 1.000052 TGTTGCATCGACCTACAACGA 60.000 47.619 13.59 0.00 44.13 3.85
2449 10158 1.654105 GTTGCATCGACCTACAACGAG 59.346 52.381 0.00 0.00 41.63 4.18
2450 10159 0.457853 TGCATCGACCTACAACGAGC 60.458 55.000 0.00 0.00 41.63 5.03
2451 10160 1.472276 GCATCGACCTACAACGAGCG 61.472 60.000 0.00 0.00 41.63 5.03
2452 10161 1.226603 ATCGACCTACAACGAGCGC 60.227 57.895 0.00 0.00 41.63 5.92
2453 10162 2.609183 ATCGACCTACAACGAGCGCC 62.609 60.000 2.29 0.00 41.63 6.53
2454 10163 2.508663 GACCTACAACGAGCGCCC 60.509 66.667 2.29 0.00 0.00 6.13
2455 10164 3.291101 GACCTACAACGAGCGCCCA 62.291 63.158 2.29 0.00 0.00 5.36
2456 10165 2.509336 CCTACAACGAGCGCCCAG 60.509 66.667 2.29 0.00 0.00 4.45
2457 10166 2.261671 CTACAACGAGCGCCCAGT 59.738 61.111 2.29 0.00 0.00 4.00
2458 10167 1.374252 CTACAACGAGCGCCCAGTT 60.374 57.895 2.29 5.21 0.00 3.16
2460 10169 3.726517 CAACGAGCGCCCAGTTGG 61.727 66.667 23.82 11.40 40.89 3.77
2475 10184 2.358619 TGGCCGGCCAAATTAGCT 59.641 55.556 45.50 0.00 44.12 3.32
2476 10185 1.304879 TGGCCGGCCAAATTAGCTT 60.305 52.632 45.50 0.00 44.12 3.74
2477 10186 1.319614 TGGCCGGCCAAATTAGCTTC 61.320 55.000 45.50 15.12 44.12 3.86
2478 10187 1.037579 GGCCGGCCAAATTAGCTTCT 61.038 55.000 40.73 0.00 35.81 2.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 5.407691 GTGTTAGTTAGTTAGTTCAGGTGCC 59.592 44.000 0.00 0.00 0.00 5.01
4 5 6.221659 AGTGTTAGTTAGTTAGTTCAGGTGC 58.778 40.000 0.00 0.00 0.00 5.01
5 6 8.574737 ACTAGTGTTAGTTAGTTAGTTCAGGTG 58.425 37.037 0.00 0.00 36.75 4.00
6 7 8.703378 ACTAGTGTTAGTTAGTTAGTTCAGGT 57.297 34.615 0.00 0.00 36.75 4.00
61 62 4.553323 TCTAACGCTATAGAAATTCGGCC 58.447 43.478 3.21 0.00 0.00 6.13
100 103 2.268298 GAATCGTGCATAGTCGGTTGT 58.732 47.619 0.00 0.00 30.43 3.32
106 109 5.176590 GGAAGAAGATGAATCGTGCATAGTC 59.823 44.000 0.00 0.00 0.00 2.59
110 113 4.125703 GAGGAAGAAGATGAATCGTGCAT 58.874 43.478 0.00 0.00 0.00 3.96
116 119 2.808567 GCGGGGAGGAAGAAGATGAATC 60.809 54.545 0.00 0.00 0.00 2.52
146 149 2.561956 TAGCTAGCCCGGCATCGAC 61.562 63.158 12.13 0.00 39.00 4.20
151 154 2.821685 CATGTAGCTAGCCCGGCA 59.178 61.111 12.13 5.85 0.00 5.69
163 166 2.358372 TGCGAGGCAGGAGCATGTA 61.358 57.895 0.00 0.00 44.61 2.29
166 169 2.060383 TAGTGCGAGGCAGGAGCAT 61.060 57.895 0.00 0.00 43.17 3.79
193 196 4.241555 GTGCGGGGATGGCGAGAT 62.242 66.667 0.00 0.00 0.00 2.75
209 212 0.179037 CGATGATGGTCCATGCCAGT 60.179 55.000 9.76 0.00 42.47 4.00
213 216 0.035317 TAGGCGATGATGGTCCATGC 59.965 55.000 9.76 6.21 0.00 4.06
215 218 0.979665 CCTAGGCGATGATGGTCCAT 59.020 55.000 3.26 3.26 0.00 3.41
222 225 0.891373 CCGATGACCTAGGCGATGAT 59.109 55.000 9.30 0.00 0.00 2.45
223 226 1.179174 CCCGATGACCTAGGCGATGA 61.179 60.000 9.30 0.00 0.00 2.92
224 227 1.290324 CCCGATGACCTAGGCGATG 59.710 63.158 9.30 0.00 0.00 3.84
225 228 2.574955 GCCCGATGACCTAGGCGAT 61.575 63.158 9.30 0.00 35.30 4.58
229 232 4.301027 GCCGCCCGATGACCTAGG 62.301 72.222 7.41 7.41 0.00 3.02
231 234 4.853142 AGGCCGCCCGATGACCTA 62.853 66.667 5.55 0.00 35.76 3.08
259 262 3.918220 GCGAGCCGTGAATGAGCG 61.918 66.667 0.00 0.00 0.00 5.03
274 277 2.670934 AAGCCTTGGCTGAGTGCG 60.671 61.111 15.52 0.00 44.05 5.34
277 280 1.849823 AGGGAAGCCTTGGCTGAGT 60.850 57.895 15.52 0.00 0.00 3.41
289 292 1.738099 CAACCGCGAGACAGGGAAG 60.738 63.158 8.23 0.00 0.00 3.46
290 293 2.342279 CAACCGCGAGACAGGGAA 59.658 61.111 8.23 0.00 0.00 3.97
295 298 0.609151 TTTATCCCAACCGCGAGACA 59.391 50.000 8.23 0.00 0.00 3.41
301 304 3.859411 TTTGTGATTTATCCCAACCGC 57.141 42.857 0.00 0.00 0.00 5.68
304 307 5.578776 GGTCGATTTGTGATTTATCCCAAC 58.421 41.667 0.00 0.00 0.00 3.77
310 313 5.968387 GAGTCGGTCGATTTGTGATTTAT 57.032 39.130 0.00 0.00 0.00 1.40
346 349 1.672881 GGGCCGAGAGAATGTTTCATG 59.327 52.381 0.00 0.00 0.00 3.07
355 358 1.272490 CTATAATGCGGGCCGAGAGAA 59.728 52.381 33.44 10.70 0.00 2.87
356 359 0.888619 CTATAATGCGGGCCGAGAGA 59.111 55.000 33.44 12.14 0.00 3.10
363 366 4.109766 GTTTTTGGTTCTATAATGCGGGC 58.890 43.478 0.00 0.00 0.00 6.13
367 370 9.083080 GTACCATTGTTTTTGGTTCTATAATGC 57.917 33.333 0.01 0.00 45.19 3.56
385 388 5.560148 GCGAGAGTATGTTTTGTACCATTG 58.440 41.667 0.00 0.00 0.00 2.82
394 397 2.624316 TCGACGCGAGAGTATGTTTT 57.376 45.000 15.93 0.00 0.00 2.43
395 398 2.624316 TTCGACGCGAGAGTATGTTT 57.376 45.000 15.93 0.00 37.14 2.83
401 404 2.798283 TGAAAAATTTCGACGCGAGAGT 59.202 40.909 15.93 1.88 40.01 3.24
428 431 3.829886 TTCCGCTTTTGCTTACATCAG 57.170 42.857 0.00 0.00 44.80 2.90
435 438 3.802139 GCTTAACTTTTCCGCTTTTGCTT 59.198 39.130 0.00 0.00 44.80 3.91
684 1495 3.823330 GACCCGACCGACTGCGAT 61.823 66.667 0.00 0.00 40.82 4.58
839 1683 2.438249 GGGTAAGTAGGCCCCGTCC 61.438 68.421 0.00 0.00 38.99 4.79
927 2466 5.186797 GGTTGAGAGGAGAAATTCAGAGAGA 59.813 44.000 0.00 0.00 0.00 3.10
933 2472 3.560025 GGCAGGTTGAGAGGAGAAATTCA 60.560 47.826 0.00 0.00 0.00 2.57
1180 5718 2.162754 CACGACGGCCGGATGTAAC 61.163 63.158 31.76 10.11 43.93 2.50
1190 6003 4.541482 CCATGCATGCACGACGGC 62.541 66.667 25.37 0.10 0.00 5.68
1193 6006 2.793946 GACCCATGCATGCACGAC 59.206 61.111 25.37 10.09 0.00 4.34
1208 6032 6.787515 CACGCAGAATACATAATTTCATCGAC 59.212 38.462 0.00 0.00 0.00 4.20
1216 6040 5.027737 CGTTTGCACGCAGAATACATAATT 58.972 37.500 0.00 0.00 40.18 1.40
1220 6057 1.130373 CCGTTTGCACGCAGAATACAT 59.870 47.619 0.00 0.00 45.72 2.29
1221 6058 0.515127 CCGTTTGCACGCAGAATACA 59.485 50.000 0.00 0.00 45.72 2.29
1231 6068 3.636282 AAACTTGGTATCCGTTTGCAC 57.364 42.857 0.00 0.00 30.39 4.57
1244 6081 1.722464 CACGCATGCATGAAAACTTGG 59.278 47.619 30.64 9.77 0.00 3.61
1254 6107 1.289694 CACCCAAACACGCATGCAT 59.710 52.632 19.57 0.00 0.00 3.96
1255 6108 2.726909 CACCCAAACACGCATGCA 59.273 55.556 19.57 0.00 0.00 3.96
1258 6111 1.827789 ACTGCACCCAAACACGCAT 60.828 52.632 0.00 0.00 33.15 4.73
1259 6112 2.439338 ACTGCACCCAAACACGCA 60.439 55.556 0.00 0.00 0.00 5.24
1260 6113 2.026014 CACTGCACCCAAACACGC 59.974 61.111 0.00 0.00 0.00 5.34
1261 6114 0.248458 GAACACTGCACCCAAACACG 60.248 55.000 0.00 0.00 0.00 4.49
1262 6115 0.814457 TGAACACTGCACCCAAACAC 59.186 50.000 0.00 0.00 0.00 3.32
1263 6116 1.476085 CTTGAACACTGCACCCAAACA 59.524 47.619 0.00 0.00 0.00 2.83
1264 6117 1.476488 ACTTGAACACTGCACCCAAAC 59.524 47.619 0.00 0.00 0.00 2.93
1265 6118 1.846007 ACTTGAACACTGCACCCAAA 58.154 45.000 0.00 0.00 0.00 3.28
1266 6119 2.294074 GTACTTGAACACTGCACCCAA 58.706 47.619 0.00 0.00 0.00 4.12
1267 6120 1.808512 CGTACTTGAACACTGCACCCA 60.809 52.381 0.00 0.00 0.00 4.51
1268 6121 0.865769 CGTACTTGAACACTGCACCC 59.134 55.000 0.00 0.00 0.00 4.61
1269 6122 1.525619 GTCGTACTTGAACACTGCACC 59.474 52.381 0.00 0.00 0.00 5.01
1400 6264 0.249531 TGAAGTAGTTTGTGCCGCGA 60.250 50.000 8.23 0.00 0.00 5.87
1480 6344 2.943034 GATGGACGACGCGACGAC 60.943 66.667 34.99 28.23 37.03 4.34
1542 6417 7.498570 TCGCCCGTTTATTTGGTTATTATTAGT 59.501 33.333 0.00 0.00 0.00 2.24
1544 6419 7.520292 GCTCGCCCGTTTATTTGGTTATTATTA 60.520 37.037 0.00 0.00 0.00 0.98
1545 6420 6.696441 TCGCCCGTTTATTTGGTTATTATT 57.304 33.333 0.00 0.00 0.00 1.40
1546 6421 5.278120 GCTCGCCCGTTTATTTGGTTATTAT 60.278 40.000 0.00 0.00 0.00 1.28
1565 6444 0.248377 ACCGAAGTATGTACGCTCGC 60.248 55.000 10.35 0.00 36.08 5.03
1614 6493 4.614284 CACCGTACGATAATCAATACGACC 59.386 45.833 18.76 0.00 42.27 4.79
1652 6533 3.988976 ATTATGATCGATGGAGTGGGG 57.011 47.619 0.54 0.00 0.00 4.96
1742 6639 3.254903 ACAAATAGCAAACCCGGAAGAAC 59.745 43.478 0.73 0.00 0.00 3.01
1749 6646 3.004315 ACAAGTCACAAATAGCAAACCCG 59.996 43.478 0.00 0.00 0.00 5.28
1752 6649 5.821204 ACTCACAAGTCACAAATAGCAAAC 58.179 37.500 0.00 0.00 0.00 2.93
1767 6664 2.124903 ACAACTTACGCGACTCACAAG 58.875 47.619 15.93 8.32 0.00 3.16
1790 6687 0.608640 GCCCGGTCTCTCTGAGAAAA 59.391 55.000 8.95 0.00 40.59 2.29
1791 6688 1.258445 GGCCCGGTCTCTCTGAGAAA 61.258 60.000 8.95 0.00 40.59 2.52
1792 6689 1.682684 GGCCCGGTCTCTCTGAGAA 60.683 63.158 8.95 0.00 40.59 2.87
1793 6690 2.043852 GGCCCGGTCTCTCTGAGA 60.044 66.667 7.24 7.24 36.22 3.27
1795 6692 1.984570 CTTGGCCCGGTCTCTCTGA 60.985 63.158 0.00 0.00 0.00 3.27
1796 6693 1.333636 ATCTTGGCCCGGTCTCTCTG 61.334 60.000 0.00 0.00 0.00 3.35
1797 6694 0.261991 TATCTTGGCCCGGTCTCTCT 59.738 55.000 0.00 0.00 0.00 3.10
1798 6695 0.389757 GTATCTTGGCCCGGTCTCTC 59.610 60.000 0.00 0.00 0.00 3.20
1799 6696 0.325296 TGTATCTTGGCCCGGTCTCT 60.325 55.000 0.00 0.00 0.00 3.10
1800 6697 0.105039 CTGTATCTTGGCCCGGTCTC 59.895 60.000 0.00 0.00 0.00 3.36
1801 6698 0.617820 ACTGTATCTTGGCCCGGTCT 60.618 55.000 0.00 0.00 0.00 3.85
1802 6699 0.462047 CACTGTATCTTGGCCCGGTC 60.462 60.000 0.00 0.00 0.00 4.79
1803 6700 1.198759 ACACTGTATCTTGGCCCGGT 61.199 55.000 0.00 0.00 0.00 5.28
1804 6701 0.462047 GACACTGTATCTTGGCCCGG 60.462 60.000 0.00 0.00 0.00 5.73
1805 6702 0.806102 CGACACTGTATCTTGGCCCG 60.806 60.000 0.00 0.00 0.00 6.13
1806 6703 1.090052 GCGACACTGTATCTTGGCCC 61.090 60.000 0.00 0.00 0.00 5.80
1811 6719 1.255667 ACGGGGCGACACTGTATCTT 61.256 55.000 0.00 0.00 0.00 2.40
1816 6724 3.991051 CTCACGGGGCGACACTGT 61.991 66.667 0.00 0.00 0.00 3.55
1820 6728 2.782222 GCTATCTCACGGGGCGACA 61.782 63.158 0.00 0.00 0.00 4.35
1829 6737 1.015109 TCTCCGTCGTGCTATCTCAC 58.985 55.000 0.00 0.00 0.00 3.51
1830 6738 1.015109 GTCTCCGTCGTGCTATCTCA 58.985 55.000 0.00 0.00 0.00 3.27
1831 6739 0.042013 CGTCTCCGTCGTGCTATCTC 60.042 60.000 0.00 0.00 0.00 2.75
1832 6740 0.461516 TCGTCTCCGTCGTGCTATCT 60.462 55.000 0.00 0.00 35.01 1.98
1834 6742 1.022982 TGTCGTCTCCGTCGTGCTAT 61.023 55.000 0.00 0.00 35.01 2.97
1836 6744 2.549198 TTGTCGTCTCCGTCGTGCT 61.549 57.895 0.00 0.00 35.01 4.40
1837 6745 2.050714 TTGTCGTCTCCGTCGTGC 60.051 61.111 0.00 0.00 35.01 5.34
1838 6746 0.725118 GAGTTGTCGTCTCCGTCGTG 60.725 60.000 0.00 0.00 35.01 4.35
1839 6747 1.162181 TGAGTTGTCGTCTCCGTCGT 61.162 55.000 0.00 0.00 35.01 4.34
1840 6748 0.040692 TTGAGTTGTCGTCTCCGTCG 60.041 55.000 0.00 0.00 35.01 5.12
1843 6751 0.318699 TGCTTGAGTTGTCGTCTCCG 60.319 55.000 0.00 0.00 0.00 4.63
1845 6753 2.323959 CTCTGCTTGAGTTGTCGTCTC 58.676 52.381 0.00 0.00 37.99 3.36
1846 6754 2.430546 CTCTGCTTGAGTTGTCGTCT 57.569 50.000 0.00 0.00 37.99 4.18
1856 6764 4.322801 GCCTACTTTTCCTACTCTGCTTGA 60.323 45.833 0.00 0.00 0.00 3.02
1857 6765 3.935828 GCCTACTTTTCCTACTCTGCTTG 59.064 47.826 0.00 0.00 0.00 4.01
1858 6766 3.368531 CGCCTACTTTTCCTACTCTGCTT 60.369 47.826 0.00 0.00 0.00 3.91
1860 6768 2.541556 CGCCTACTTTTCCTACTCTGC 58.458 52.381 0.00 0.00 0.00 4.26
1861 6769 2.738964 GCCGCCTACTTTTCCTACTCTG 60.739 54.545 0.00 0.00 0.00 3.35
1862 6770 1.481363 GCCGCCTACTTTTCCTACTCT 59.519 52.381 0.00 0.00 0.00 3.24
1864 6772 1.207329 CTGCCGCCTACTTTTCCTACT 59.793 52.381 0.00 0.00 0.00 2.57
1866 6774 0.107848 GCTGCCGCCTACTTTTCCTA 60.108 55.000 0.00 0.00 0.00 2.94
1867 6775 1.377333 GCTGCCGCCTACTTTTCCT 60.377 57.895 0.00 0.00 0.00 3.36
1868 6776 1.674322 TGCTGCCGCCTACTTTTCC 60.674 57.895 0.00 0.00 34.43 3.13
1869 6777 1.502190 GTGCTGCCGCCTACTTTTC 59.498 57.895 0.00 0.00 34.43 2.29
1870 6778 1.971695 GGTGCTGCCGCCTACTTTT 60.972 57.895 0.00 0.00 38.62 2.27
1871 6779 2.359975 GGTGCTGCCGCCTACTTT 60.360 61.111 0.00 0.00 38.62 2.66
1872 6780 4.410400 GGGTGCTGCCGCCTACTT 62.410 66.667 9.62 0.00 41.49 2.24
1874 6782 4.715523 TTGGGTGCTGCCGCCTAC 62.716 66.667 9.62 0.00 41.49 3.18
1878 6786 3.683937 AATGTTGGGTGCTGCCGC 61.684 61.111 0.00 0.00 38.44 6.53
1879 6787 2.259204 CAATGTTGGGTGCTGCCG 59.741 61.111 0.00 0.00 38.44 5.69
1880 6788 2.658422 CCAATGTTGGGTGCTGCC 59.342 61.111 3.80 0.00 44.70 4.85
1889 6797 1.063616 CGATGAGCAGCTCCAATGTTG 59.936 52.381 20.16 1.46 0.00 3.33
1890 6798 1.376543 CGATGAGCAGCTCCAATGTT 58.623 50.000 20.16 0.00 0.00 2.71
1891 6799 0.463295 CCGATGAGCAGCTCCAATGT 60.463 55.000 20.16 0.66 0.00 2.71
1892 6800 1.783031 GCCGATGAGCAGCTCCAATG 61.783 60.000 20.16 7.28 0.00 2.82
1893 6801 1.525535 GCCGATGAGCAGCTCCAAT 60.526 57.895 20.16 7.47 0.00 3.16
1894 6802 1.329913 TAGCCGATGAGCAGCTCCAA 61.330 55.000 20.16 2.02 38.06 3.53
1896 6804 1.006337 CTAGCCGATGAGCAGCTCC 60.006 63.158 20.16 4.25 38.06 4.70
1897 6805 1.664333 GCTAGCCGATGAGCAGCTC 60.664 63.158 16.21 16.21 38.62 4.09
1898 6806 2.420890 GCTAGCCGATGAGCAGCT 59.579 61.111 2.29 0.00 38.62 4.24
1899 6807 2.960957 TTCGCTAGCCGATGAGCAGC 62.961 60.000 9.66 0.00 46.81 5.25
1900 6808 0.938637 CTTCGCTAGCCGATGAGCAG 60.939 60.000 9.66 0.58 46.81 4.24
1901 6809 1.066422 CTTCGCTAGCCGATGAGCA 59.934 57.895 9.66 0.00 46.81 4.26
1902 6810 1.663074 CCTTCGCTAGCCGATGAGC 60.663 63.158 9.66 0.00 46.81 4.26
1903 6811 0.596083 CACCTTCGCTAGCCGATGAG 60.596 60.000 9.66 5.39 46.81 2.90
1904 6812 1.437573 CACCTTCGCTAGCCGATGA 59.562 57.895 9.66 0.00 46.81 2.92
1905 6813 1.592669 CCACCTTCGCTAGCCGATG 60.593 63.158 9.66 11.41 46.81 3.84
1906 6814 2.797278 CCCACCTTCGCTAGCCGAT 61.797 63.158 9.66 0.00 46.81 4.18
1907 6815 3.458163 CCCACCTTCGCTAGCCGA 61.458 66.667 9.66 7.16 45.77 5.54
1909 8041 1.002502 AAACCCACCTTCGCTAGCC 60.003 57.895 9.66 0.00 0.00 3.93
1913 8045 2.193536 GCACAAACCCACCTTCGCT 61.194 57.895 0.00 0.00 0.00 4.93
1916 8048 1.620822 ATCTGCACAAACCCACCTTC 58.379 50.000 0.00 0.00 0.00 3.46
1917 8049 2.514803 GTATCTGCACAAACCCACCTT 58.485 47.619 0.00 0.00 0.00 3.50
1920 8052 1.519408 ACGTATCTGCACAAACCCAC 58.481 50.000 0.00 0.00 0.00 4.61
1927 8059 5.221880 AGTTTTACGTAACGTATCTGCACA 58.778 37.500 7.70 0.00 41.97 4.57
1930 8062 5.445010 CCCAAGTTTTACGTAACGTATCTGC 60.445 44.000 7.70 0.00 41.97 4.26
1931 8063 5.634859 ACCCAAGTTTTACGTAACGTATCTG 59.365 40.000 7.70 1.45 41.97 2.90
1933 8886 5.633182 TGACCCAAGTTTTACGTAACGTATC 59.367 40.000 7.70 0.00 41.97 2.24
1937 8890 3.184986 CCTGACCCAAGTTTTACGTAACG 59.815 47.826 7.70 0.00 33.26 3.18
1938 8891 4.129380 ACCTGACCCAAGTTTTACGTAAC 58.871 43.478 7.70 0.00 0.00 2.50
1939 8892 4.420522 ACCTGACCCAAGTTTTACGTAA 57.579 40.909 3.29 3.29 0.00 3.18
1942 8895 4.630069 CAGATACCTGACCCAAGTTTTACG 59.370 45.833 0.00 0.00 43.02 3.18
1944 8897 4.566907 GGCAGATACCTGACCCAAGTTTTA 60.567 45.833 0.00 0.00 42.74 1.52
1946 8899 2.290960 GGCAGATACCTGACCCAAGTTT 60.291 50.000 0.00 0.00 42.74 2.66
1955 8908 5.894298 AATACAATCTGGCAGATACCTGA 57.106 39.130 29.02 13.81 43.02 3.86
1956 8909 6.057533 TCAAATACAATCTGGCAGATACCTG 58.942 40.000 29.02 24.31 43.22 4.00
1960 8913 7.512130 ACATCTCAAATACAATCTGGCAGATA 58.488 34.615 29.02 15.19 32.89 1.98
1964 8917 7.280876 GTCTAACATCTCAAATACAATCTGGCA 59.719 37.037 0.00 0.00 0.00 4.92
1965 8918 7.497249 AGTCTAACATCTCAAATACAATCTGGC 59.503 37.037 0.00 0.00 0.00 4.85
1966 8919 8.954950 AGTCTAACATCTCAAATACAATCTGG 57.045 34.615 0.00 0.00 0.00 3.86
1967 8920 8.750416 CGAGTCTAACATCTCAAATACAATCTG 58.250 37.037 0.00 0.00 0.00 2.90
1968 8921 7.923344 CCGAGTCTAACATCTCAAATACAATCT 59.077 37.037 0.00 0.00 0.00 2.40
1970 8923 7.782049 TCCGAGTCTAACATCTCAAATACAAT 58.218 34.615 0.00 0.00 0.00 2.71
1972 8925 6.769134 TCCGAGTCTAACATCTCAAATACA 57.231 37.500 0.00 0.00 0.00 2.29
1974 8927 6.262496 ACGATCCGAGTCTAACATCTCAAATA 59.738 38.462 0.00 0.00 0.00 1.40
1975 8928 5.067936 ACGATCCGAGTCTAACATCTCAAAT 59.932 40.000 0.00 0.00 0.00 2.32
1976 8929 4.398358 ACGATCCGAGTCTAACATCTCAAA 59.602 41.667 0.00 0.00 0.00 2.69
1977 8930 3.945921 ACGATCCGAGTCTAACATCTCAA 59.054 43.478 0.00 0.00 0.00 3.02
1978 8931 3.312697 CACGATCCGAGTCTAACATCTCA 59.687 47.826 0.00 0.00 0.00 3.27
1979 8932 3.850374 GCACGATCCGAGTCTAACATCTC 60.850 52.174 0.00 0.00 0.00 2.75
1980 8933 2.033550 GCACGATCCGAGTCTAACATCT 59.966 50.000 0.00 0.00 0.00 2.90
1981 8934 2.386249 GCACGATCCGAGTCTAACATC 58.614 52.381 0.00 0.00 0.00 3.06
1982 8935 1.067212 GGCACGATCCGAGTCTAACAT 59.933 52.381 0.00 0.00 0.00 2.71
1983 8936 0.454600 GGCACGATCCGAGTCTAACA 59.545 55.000 0.00 0.00 0.00 2.41
1984 8937 3.253416 GGCACGATCCGAGTCTAAC 57.747 57.895 0.00 0.00 0.00 2.34
1999 8952 1.893544 TTTATTCGTTGAACCCGGCA 58.106 45.000 0.00 0.00 0.00 5.69
2000 8953 2.030981 TGTTTTATTCGTTGAACCCGGC 60.031 45.455 0.00 0.00 0.00 6.13
2001 8954 3.003482 TGTGTTTTATTCGTTGAACCCGG 59.997 43.478 0.00 0.00 0.00 5.73
2002 8955 4.212213 TGTGTTTTATTCGTTGAACCCG 57.788 40.909 0.00 0.00 0.00 5.28
2003 8956 4.741185 GGTTGTGTTTTATTCGTTGAACCC 59.259 41.667 0.00 0.00 0.00 4.11
2004 8957 4.741185 GGGTTGTGTTTTATTCGTTGAACC 59.259 41.667 0.00 0.00 0.00 3.62
2005 8958 5.341617 TGGGTTGTGTTTTATTCGTTGAAC 58.658 37.500 0.00 0.00 0.00 3.18
2009 8962 5.069251 TGGAATGGGTTGTGTTTTATTCGTT 59.931 36.000 0.00 0.00 0.00 3.85
2010 8963 4.585162 TGGAATGGGTTGTGTTTTATTCGT 59.415 37.500 0.00 0.00 0.00 3.85
2011 8964 5.127693 TGGAATGGGTTGTGTTTTATTCG 57.872 39.130 0.00 0.00 0.00 3.34
2012 8965 4.929211 GCTGGAATGGGTTGTGTTTTATTC 59.071 41.667 0.00 0.00 0.00 1.75
2013 8966 4.592778 AGCTGGAATGGGTTGTGTTTTATT 59.407 37.500 0.00 0.00 0.00 1.40
2014 8967 4.159557 AGCTGGAATGGGTTGTGTTTTAT 58.840 39.130 0.00 0.00 0.00 1.40
2016 8969 2.397597 AGCTGGAATGGGTTGTGTTTT 58.602 42.857 0.00 0.00 0.00 2.43
2019 8972 2.969821 TTAGCTGGAATGGGTTGTGT 57.030 45.000 0.00 0.00 0.00 3.72
2020 8973 4.599047 TTTTTAGCTGGAATGGGTTGTG 57.401 40.909 0.00 0.00 0.00 3.33
2056 9605 0.032813 TATTTCCGGACGGAGGGAGT 60.033 55.000 13.64 0.00 46.06 3.85
2057 9606 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
2058 9607 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
2059 9608 0.388294 GAGTATTTCCGGACGGAGGG 59.612 60.000 13.64 0.00 46.06 4.30
2061 9610 0.737219 ACGAGTATTTCCGGACGGAG 59.263 55.000 13.64 3.15 46.06 4.63
2062 9611 0.734889 GACGAGTATTTCCGGACGGA 59.265 55.000 1.83 9.76 43.52 4.69
2066 9615 2.358957 TCTTCGACGAGTATTTCCGGA 58.641 47.619 0.00 0.00 0.00 5.14
2067 9616 2.838386 TCTTCGACGAGTATTTCCGG 57.162 50.000 0.00 0.00 0.00 5.14
2068 9617 4.026804 CCATTTCTTCGACGAGTATTTCCG 60.027 45.833 0.00 0.00 0.00 4.30
2069 9618 5.107133 TCCATTTCTTCGACGAGTATTTCC 58.893 41.667 0.00 0.00 0.00 3.13
2070 9619 6.255887 ACATCCATTTCTTCGACGAGTATTTC 59.744 38.462 0.00 0.00 0.00 2.17
2071 9620 6.106673 ACATCCATTTCTTCGACGAGTATTT 58.893 36.000 0.00 0.00 0.00 1.40
2072 9621 5.661458 ACATCCATTTCTTCGACGAGTATT 58.339 37.500 0.00 0.00 0.00 1.89
2074 9623 4.713824 ACATCCATTTCTTCGACGAGTA 57.286 40.909 0.00 0.00 0.00 2.59
2076 9625 5.524284 AGATACATCCATTTCTTCGACGAG 58.476 41.667 0.00 0.00 0.00 4.18
2077 9626 5.515797 AGATACATCCATTTCTTCGACGA 57.484 39.130 0.00 0.00 0.00 4.20
2078 9627 6.669278 TCTAGATACATCCATTTCTTCGACG 58.331 40.000 0.00 0.00 0.00 5.12
2079 9628 8.085296 ACATCTAGATACATCCATTTCTTCGAC 58.915 37.037 4.54 0.00 0.00 4.20
2110 9659 9.982651 GCATAGAAATGAATGTACCTAGAACTA 57.017 33.333 0.00 0.00 34.84 2.24
2111 9660 8.486210 TGCATAGAAATGAATGTACCTAGAACT 58.514 33.333 0.00 0.00 34.84 3.01
2118 9667 8.887717 GGAGATATGCATAGAAATGAATGTACC 58.112 37.037 12.79 0.00 33.12 3.34
2119 9668 8.598924 CGGAGATATGCATAGAAATGAATGTAC 58.401 37.037 12.79 0.00 33.12 2.90
2120 9669 8.531146 TCGGAGATATGCATAGAAATGAATGTA 58.469 33.333 12.79 0.00 33.12 2.29
2122 9671 7.332678 TGTCGGAGATATGCATAGAAATGAATG 59.667 37.037 12.79 0.00 40.67 2.67
2123 9672 7.389232 TGTCGGAGATATGCATAGAAATGAAT 58.611 34.615 12.79 0.00 40.67 2.57
2127 9676 6.763355 ACTTGTCGGAGATATGCATAGAAAT 58.237 36.000 12.79 0.00 40.67 2.17
2129 9678 5.791336 ACTTGTCGGAGATATGCATAGAA 57.209 39.130 12.79 0.00 40.67 2.10
2130 9679 7.468141 AATACTTGTCGGAGATATGCATAGA 57.532 36.000 12.79 0.48 40.67 1.98
2131 9680 7.276658 GGAAATACTTGTCGGAGATATGCATAG 59.723 40.741 12.79 0.00 40.67 2.23
2132 9681 7.097192 GGAAATACTTGTCGGAGATATGCATA 58.903 38.462 9.27 9.27 40.67 3.14
2133 9682 5.934625 GGAAATACTTGTCGGAGATATGCAT 59.065 40.000 3.79 3.79 40.67 3.96
2134 9683 5.297547 GGAAATACTTGTCGGAGATATGCA 58.702 41.667 0.00 0.00 40.67 3.96
2135 9684 4.386049 CGGAAATACTTGTCGGAGATATGC 59.614 45.833 0.00 0.00 40.67 3.14
2136 9685 4.923871 CCGGAAATACTTGTCGGAGATATG 59.076 45.833 0.00 0.00 42.94 1.78
2137 9686 4.831155 TCCGGAAATACTTGTCGGAGATAT 59.169 41.667 0.00 0.00 43.84 1.63
2138 9687 4.209538 TCCGGAAATACTTGTCGGAGATA 58.790 43.478 0.00 0.00 43.84 1.98
2139 9688 3.028850 TCCGGAAATACTTGTCGGAGAT 58.971 45.455 0.00 0.00 43.84 2.75
2140 9689 2.449464 TCCGGAAATACTTGTCGGAGA 58.551 47.619 0.00 0.00 43.84 3.71
2142 9691 1.135315 CGTCCGGAAATACTTGTCGGA 60.135 52.381 5.23 0.00 46.06 4.55
2145 9694 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
2146 9695 1.206371 CCTCCGTCCGGAAATACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
2147 9696 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
2148 9697 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
2149 9698 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
2150 9699 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
2152 9701 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
2153 9702 0.682209 CTACTCCCTCCGTCCGGAAA 60.682 60.000 5.23 0.00 44.66 3.13
2154 9703 1.077212 CTACTCCCTCCGTCCGGAA 60.077 63.158 5.23 0.00 44.66 4.30
2155 9704 1.856539 AACTACTCCCTCCGTCCGGA 61.857 60.000 0.00 0.00 42.90 5.14
2156 9705 1.379576 AACTACTCCCTCCGTCCGG 60.380 63.158 0.00 0.00 0.00 5.14
2157 9706 0.964358 ACAACTACTCCCTCCGTCCG 60.964 60.000 0.00 0.00 0.00 4.79
2158 9707 1.264295 AACAACTACTCCCTCCGTCC 58.736 55.000 0.00 0.00 0.00 4.79
2159 9708 3.087781 ACTAACAACTACTCCCTCCGTC 58.912 50.000 0.00 0.00 0.00 4.79
2161 9710 3.066481 GCTACTAACAACTACTCCCTCCG 59.934 52.174 0.00 0.00 0.00 4.63
2162 9711 4.021916 TGCTACTAACAACTACTCCCTCC 58.978 47.826 0.00 0.00 0.00 4.30
2163 9712 5.855740 ATGCTACTAACAACTACTCCCTC 57.144 43.478 0.00 0.00 0.00 4.30
2229 9778 7.333528 TGTCATCTCAGCTAAAACACTTTTT 57.666 32.000 0.00 0.00 38.51 1.94
2230 9779 6.942532 TGTCATCTCAGCTAAAACACTTTT 57.057 33.333 0.00 0.00 36.67 2.27
2231 9780 7.013655 ACAATGTCATCTCAGCTAAAACACTTT 59.986 33.333 0.00 0.00 0.00 2.66
2233 9782 6.000219 ACAATGTCATCTCAGCTAAAACACT 59.000 36.000 0.00 0.00 0.00 3.55
2236 9785 7.138692 AGAACAATGTCATCTCAGCTAAAAC 57.861 36.000 0.00 0.00 0.00 2.43
2237 9786 6.091305 CGAGAACAATGTCATCTCAGCTAAAA 59.909 38.462 13.54 0.00 39.62 1.52
2239 9788 5.105063 CGAGAACAATGTCATCTCAGCTAA 58.895 41.667 13.54 0.00 39.62 3.09
2240 9789 4.440663 CCGAGAACAATGTCATCTCAGCTA 60.441 45.833 13.54 0.00 39.62 3.32
2241 9790 3.519579 CGAGAACAATGTCATCTCAGCT 58.480 45.455 13.54 0.00 39.62 4.24
2244 9793 3.961480 ACCGAGAACAATGTCATCTCA 57.039 42.857 13.54 0.00 39.62 3.27
2287 9836 7.497909 CCACGGGCTTTAAAGAAGATTAAGATA 59.502 37.037 19.48 0.00 0.00 1.98
2288 9837 6.318900 CCACGGGCTTTAAAGAAGATTAAGAT 59.681 38.462 19.48 0.00 0.00 2.40
2289 9838 5.646360 CCACGGGCTTTAAAGAAGATTAAGA 59.354 40.000 19.48 0.00 0.00 2.10
2290 9839 5.676331 GCCACGGGCTTTAAAGAAGATTAAG 60.676 44.000 19.48 3.46 46.69 1.85
2295 10004 1.530323 GCCACGGGCTTTAAAGAAGA 58.470 50.000 19.48 0.00 46.69 2.87
2310 10019 3.680620 TACGCCCATGCTCTGCCAC 62.681 63.158 0.00 0.00 34.43 5.01
2314 10023 0.747255 AGTAGTACGCCCATGCTCTG 59.253 55.000 0.00 0.00 34.43 3.35
2315 10024 2.231529 CTAGTAGTACGCCCATGCTCT 58.768 52.381 0.00 0.00 34.43 4.09
2318 10027 1.407979 ACACTAGTAGTACGCCCATGC 59.592 52.381 1.57 0.00 0.00 4.06
2319 10028 3.795623 AACACTAGTAGTACGCCCATG 57.204 47.619 1.57 0.00 0.00 3.66
2320 10029 3.512724 ACAAACACTAGTAGTACGCCCAT 59.487 43.478 1.57 0.00 0.00 4.00
2321 10030 2.892852 ACAAACACTAGTAGTACGCCCA 59.107 45.455 1.57 0.00 0.00 5.36
2322 10031 3.582714 ACAAACACTAGTAGTACGCCC 57.417 47.619 1.57 0.00 0.00 6.13
2323 10032 4.091424 CGTACAAACACTAGTAGTACGCC 58.909 47.826 23.79 3.16 46.17 5.68
2326 10035 5.393962 CCCACGTACAAACACTAGTAGTAC 58.606 45.833 1.57 6.11 36.66 2.73
2327 10036 4.458989 CCCCACGTACAAACACTAGTAGTA 59.541 45.833 1.57 0.00 0.00 1.82
2328 10037 3.256631 CCCCACGTACAAACACTAGTAGT 59.743 47.826 0.00 0.00 0.00 2.73
2329 10038 3.507233 TCCCCACGTACAAACACTAGTAG 59.493 47.826 0.00 0.00 0.00 2.57
2330 10039 3.495331 TCCCCACGTACAAACACTAGTA 58.505 45.455 0.00 0.00 0.00 1.82
2331 10040 2.298163 CTCCCCACGTACAAACACTAGT 59.702 50.000 0.00 0.00 0.00 2.57
2332 10041 2.353406 CCTCCCCACGTACAAACACTAG 60.353 54.545 0.00 0.00 0.00 2.57
2333 10042 1.619827 CCTCCCCACGTACAAACACTA 59.380 52.381 0.00 0.00 0.00 2.74
2334 10043 0.395312 CCTCCCCACGTACAAACACT 59.605 55.000 0.00 0.00 0.00 3.55
2335 10044 0.393820 TCCTCCCCACGTACAAACAC 59.606 55.000 0.00 0.00 0.00 3.32
2336 10045 1.129917 TTCCTCCCCACGTACAAACA 58.870 50.000 0.00 0.00 0.00 2.83
2337 10046 2.148768 CTTTCCTCCCCACGTACAAAC 58.851 52.381 0.00 0.00 0.00 2.93
2338 10047 2.048601 TCTTTCCTCCCCACGTACAAA 58.951 47.619 0.00 0.00 0.00 2.83
2339 10048 1.719529 TCTTTCCTCCCCACGTACAA 58.280 50.000 0.00 0.00 0.00 2.41
2340 10049 1.621814 CTTCTTTCCTCCCCACGTACA 59.378 52.381 0.00 0.00 0.00 2.90
2341 10050 1.897802 TCTTCTTTCCTCCCCACGTAC 59.102 52.381 0.00 0.00 0.00 3.67
2342 10051 2.301009 GTTCTTCTTTCCTCCCCACGTA 59.699 50.000 0.00 0.00 0.00 3.57
2343 10052 1.071857 GTTCTTCTTTCCTCCCCACGT 59.928 52.381 0.00 0.00 0.00 4.49
2344 10053 1.809684 GTTCTTCTTTCCTCCCCACG 58.190 55.000 0.00 0.00 0.00 4.94
2345 10054 1.610886 CCGTTCTTCTTTCCTCCCCAC 60.611 57.143 0.00 0.00 0.00 4.61
2346 10055 0.690762 CCGTTCTTCTTTCCTCCCCA 59.309 55.000 0.00 0.00 0.00 4.96
2347 10056 0.035343 CCCGTTCTTCTTTCCTCCCC 60.035 60.000 0.00 0.00 0.00 4.81
2348 10057 0.691332 ACCCGTTCTTCTTTCCTCCC 59.309 55.000 0.00 0.00 0.00 4.30
2349 10058 1.346722 TCACCCGTTCTTCTTTCCTCC 59.653 52.381 0.00 0.00 0.00 4.30
2350 10059 2.037381 ACTCACCCGTTCTTCTTTCCTC 59.963 50.000 0.00 0.00 0.00 3.71
2351 10060 2.037381 GACTCACCCGTTCTTCTTTCCT 59.963 50.000 0.00 0.00 0.00 3.36
2352 10061 2.224209 TGACTCACCCGTTCTTCTTTCC 60.224 50.000 0.00 0.00 0.00 3.13
2353 10062 3.107642 TGACTCACCCGTTCTTCTTTC 57.892 47.619 0.00 0.00 0.00 2.62
2354 10063 3.181454 ACATGACTCACCCGTTCTTCTTT 60.181 43.478 0.00 0.00 0.00 2.52
2355 10064 2.368875 ACATGACTCACCCGTTCTTCTT 59.631 45.455 0.00 0.00 0.00 2.52
2356 10065 1.971357 ACATGACTCACCCGTTCTTCT 59.029 47.619 0.00 0.00 0.00 2.85
2357 10066 2.457366 ACATGACTCACCCGTTCTTC 57.543 50.000 0.00 0.00 0.00 2.87
2358 10067 2.494059 CAACATGACTCACCCGTTCTT 58.506 47.619 0.00 0.00 0.00 2.52
2359 10068 1.270839 CCAACATGACTCACCCGTTCT 60.271 52.381 0.00 0.00 0.00 3.01
2360 10069 1.156736 CCAACATGACTCACCCGTTC 58.843 55.000 0.00 0.00 0.00 3.95
2361 10070 0.250727 CCCAACATGACTCACCCGTT 60.251 55.000 0.00 0.00 0.00 4.44
2362 10071 1.374947 CCCAACATGACTCACCCGT 59.625 57.895 0.00 0.00 0.00 5.28
2363 10072 1.377202 CCCCAACATGACTCACCCG 60.377 63.158 0.00 0.00 0.00 5.28
2364 10073 0.404040 TTCCCCAACATGACTCACCC 59.596 55.000 0.00 0.00 0.00 4.61
2365 10074 1.614317 CCTTCCCCAACATGACTCACC 60.614 57.143 0.00 0.00 0.00 4.02
2366 10075 1.351017 TCCTTCCCCAACATGACTCAC 59.649 52.381 0.00 0.00 0.00 3.51
2367 10076 1.630369 CTCCTTCCCCAACATGACTCA 59.370 52.381 0.00 0.00 0.00 3.41
2368 10077 1.909302 TCTCCTTCCCCAACATGACTC 59.091 52.381 0.00 0.00 0.00 3.36
2369 10078 2.040412 GTTCTCCTTCCCCAACATGACT 59.960 50.000 0.00 0.00 0.00 3.41
2370 10079 2.224769 TGTTCTCCTTCCCCAACATGAC 60.225 50.000 0.00 0.00 0.00 3.06
2371 10080 2.040278 CTGTTCTCCTTCCCCAACATGA 59.960 50.000 0.00 0.00 0.00 3.07
2372 10081 2.224867 ACTGTTCTCCTTCCCCAACATG 60.225 50.000 0.00 0.00 0.00 3.21
2373 10082 2.065799 ACTGTTCTCCTTCCCCAACAT 58.934 47.619 0.00 0.00 0.00 2.71
2374 10083 1.142870 CACTGTTCTCCTTCCCCAACA 59.857 52.381 0.00 0.00 0.00 3.33
2375 10084 1.545651 CCACTGTTCTCCTTCCCCAAC 60.546 57.143 0.00 0.00 0.00 3.77
2376 10085 0.771127 CCACTGTTCTCCTTCCCCAA 59.229 55.000 0.00 0.00 0.00 4.12
2377 10086 1.779061 GCCACTGTTCTCCTTCCCCA 61.779 60.000 0.00 0.00 0.00 4.96
2378 10087 1.002011 GCCACTGTTCTCCTTCCCC 60.002 63.158 0.00 0.00 0.00 4.81
2379 10088 1.376037 CGCCACTGTTCTCCTTCCC 60.376 63.158 0.00 0.00 0.00 3.97
2380 10089 2.035442 GCGCCACTGTTCTCCTTCC 61.035 63.158 0.00 0.00 0.00 3.46
2381 10090 2.383527 CGCGCCACTGTTCTCCTTC 61.384 63.158 0.00 0.00 0.00 3.46
2382 10091 2.357517 CGCGCCACTGTTCTCCTT 60.358 61.111 0.00 0.00 0.00 3.36
2383 10092 3.575351 GACGCGCCACTGTTCTCCT 62.575 63.158 5.73 0.00 0.00 3.69
2384 10093 2.209064 TAGACGCGCCACTGTTCTCC 62.209 60.000 5.73 0.00 0.00 3.71
2385 10094 0.179134 ATAGACGCGCCACTGTTCTC 60.179 55.000 5.73 0.00 0.00 2.87
2386 10095 1.100510 TATAGACGCGCCACTGTTCT 58.899 50.000 5.73 1.49 0.00 3.01
2387 10096 1.197910 GTATAGACGCGCCACTGTTC 58.802 55.000 5.73 0.00 0.00 3.18
2388 10097 0.528924 TGTATAGACGCGCCACTGTT 59.471 50.000 5.73 0.00 0.00 3.16
2389 10098 0.744874 ATGTATAGACGCGCCACTGT 59.255 50.000 5.73 4.47 0.00 3.55
2390 10099 1.409412 GATGTATAGACGCGCCACTG 58.591 55.000 5.73 0.00 0.00 3.66
2391 10100 0.040336 CGATGTATAGACGCGCCACT 60.040 55.000 5.73 6.12 0.00 4.00
2392 10101 1.606350 GCGATGTATAGACGCGCCAC 61.606 60.000 5.73 0.00 42.63 5.01
2393 10102 1.371267 GCGATGTATAGACGCGCCA 60.371 57.895 5.73 0.00 42.63 5.69
2394 10103 3.449042 GCGATGTATAGACGCGCC 58.551 61.111 5.73 0.00 42.63 6.53
2398 10107 0.237498 TGCGAGGCGATGTATAGACG 59.763 55.000 0.00 0.00 0.00 4.18
2399 10108 1.687628 GTGCGAGGCGATGTATAGAC 58.312 55.000 0.00 0.00 0.00 2.59
2400 10109 0.237498 CGTGCGAGGCGATGTATAGA 59.763 55.000 0.00 0.00 0.00 1.98
2401 10110 0.237498 TCGTGCGAGGCGATGTATAG 59.763 55.000 0.00 0.00 33.09 1.31
2402 10111 0.237498 CTCGTGCGAGGCGATGTATA 59.763 55.000 13.22 0.00 38.51 1.47
2403 10112 1.008424 CTCGTGCGAGGCGATGTAT 60.008 57.895 13.22 0.00 38.51 2.29
2404 10113 1.929806 AACTCGTGCGAGGCGATGTA 61.930 55.000 22.97 0.00 45.88 2.29
2405 10114 3.282745 AACTCGTGCGAGGCGATGT 62.283 57.895 22.97 1.79 45.88 3.06
2406 10115 2.507102 AACTCGTGCGAGGCGATG 60.507 61.111 22.97 1.18 45.88 3.84
2407 10116 2.202623 GAACTCGTGCGAGGCGAT 60.203 61.111 22.97 8.44 45.88 4.58
2408 10117 4.753877 CGAACTCGTGCGAGGCGA 62.754 66.667 23.93 3.68 45.88 5.54
2409 10118 4.753877 TCGAACTCGTGCGAGGCG 62.754 66.667 22.97 22.97 45.88 5.52
2410 10119 1.805945 ATTCGAACTCGTGCGAGGC 60.806 57.895 22.97 14.33 45.88 4.70
2411 10120 0.732880 ACATTCGAACTCGTGCGAGG 60.733 55.000 22.97 8.01 45.88 4.63
2412 10121 1.060713 AACATTCGAACTCGTGCGAG 58.939 50.000 18.57 18.57 46.91 5.03
2413 10122 0.781787 CAACATTCGAACTCGTGCGA 59.218 50.000 0.00 0.00 40.80 5.10
2414 10123 0.785708 GCAACATTCGAACTCGTGCG 60.786 55.000 0.00 0.00 40.80 5.34
2415 10124 0.234625 TGCAACATTCGAACTCGTGC 59.765 50.000 14.63 14.63 40.80 5.34
2416 10125 2.762472 GATGCAACATTCGAACTCGTG 58.238 47.619 0.00 0.00 40.80 4.35
2417 10126 1.390123 CGATGCAACATTCGAACTCGT 59.610 47.619 0.00 0.00 40.80 4.18
2418 10127 1.653609 TCGATGCAACATTCGAACTCG 59.346 47.619 7.63 0.31 41.06 4.18
2419 10128 2.222819 GGTCGATGCAACATTCGAACTC 60.223 50.000 16.24 3.70 46.01 3.01
2420 10129 1.732259 GGTCGATGCAACATTCGAACT 59.268 47.619 16.24 0.00 46.01 3.01
2421 10130 2.159467 GGTCGATGCAACATTCGAAC 57.841 50.000 11.42 10.45 45.03 3.95
2422 10131 2.093306 AGGTCGATGCAACATTCGAA 57.907 45.000 11.42 0.00 45.03 3.71
2423 10132 2.094442 TGTAGGTCGATGCAACATTCGA 60.094 45.455 6.05 6.05 41.70 3.71
2424 10133 2.267426 TGTAGGTCGATGCAACATTCG 58.733 47.619 0.98 0.98 36.72 3.34
2425 10134 3.483574 CGTTGTAGGTCGATGCAACATTC 60.484 47.826 16.67 4.40 43.46 2.67
2426 10135 2.415168 CGTTGTAGGTCGATGCAACATT 59.585 45.455 16.67 0.00 43.46 2.71
2427 10136 1.999735 CGTTGTAGGTCGATGCAACAT 59.000 47.619 16.67 0.00 43.46 2.71
2428 10137 1.000052 TCGTTGTAGGTCGATGCAACA 60.000 47.619 16.67 5.14 43.46 3.33
2429 10138 1.654105 CTCGTTGTAGGTCGATGCAAC 59.346 52.381 9.21 9.21 40.92 4.17
2430 10139 1.990799 CTCGTTGTAGGTCGATGCAA 58.009 50.000 0.00 0.00 35.57 4.08
2431 10140 0.457853 GCTCGTTGTAGGTCGATGCA 60.458 55.000 0.00 0.00 35.57 3.96
2432 10141 1.472276 CGCTCGTTGTAGGTCGATGC 61.472 60.000 0.00 0.00 35.57 3.91
2433 10142 1.472276 GCGCTCGTTGTAGGTCGATG 61.472 60.000 0.00 0.00 35.57 3.84
2434 10143 1.226603 GCGCTCGTTGTAGGTCGAT 60.227 57.895 0.00 0.00 35.57 3.59
2435 10144 2.177531 GCGCTCGTTGTAGGTCGA 59.822 61.111 0.00 0.00 34.88 4.20
2436 10145 2.879462 GGCGCTCGTTGTAGGTCG 60.879 66.667 7.64 0.00 0.00 4.79
2437 10146 2.508663 GGGCGCTCGTTGTAGGTC 60.509 66.667 7.64 0.00 0.00 3.85
2438 10147 3.296709 CTGGGCGCTCGTTGTAGGT 62.297 63.158 7.64 0.00 0.00 3.08
2439 10148 2.509336 CTGGGCGCTCGTTGTAGG 60.509 66.667 7.64 0.00 0.00 3.18
2440 10149 1.374252 AACTGGGCGCTCGTTGTAG 60.374 57.895 15.02 3.45 0.00 2.74
2441 10150 1.666553 CAACTGGGCGCTCGTTGTA 60.667 57.895 26.27 0.80 34.77 2.41
2442 10151 2.972505 CAACTGGGCGCTCGTTGT 60.973 61.111 26.27 13.86 34.77 3.32
2443 10152 3.726517 CCAACTGGGCGCTCGTTG 61.727 66.667 27.10 27.10 38.14 4.10
2458 10167 1.304879 AAGCTAATTTGGCCGGCCA 60.305 52.632 44.23 44.23 45.63 5.36
2459 10168 1.037579 AGAAGCTAATTTGGCCGGCC 61.038 55.000 39.40 39.40 0.00 6.13
2460 10169 2.493547 AGAAGCTAATTTGGCCGGC 58.506 52.632 21.18 21.18 0.00 6.13


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.