Multiple sequence alignment - TraesCS5B01G546900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G546900 chr5B 100.000 2707 0 0 1 2707 700210807 700208101 0.000000e+00 5000.0
1 TraesCS5B01G546900 chr4A 86.236 2354 172 60 368 2627 616500387 616502682 0.000000e+00 2412.0
2 TraesCS5B01G546900 chr4A 87.143 70 2 1 1885 1954 616502133 616502195 3.740000e-09 73.1
3 TraesCS5B01G546900 chr5D 94.112 1121 40 7 895 2013 551925353 551924257 0.000000e+00 1681.0
4 TraesCS5B01G546900 chr5D 84.742 911 64 24 1853 2707 551923601 551922710 0.000000e+00 843.0
5 TraesCS5B01G546900 chr5D 85.714 70 3 1 1885 1954 551923355 551923293 1.740000e-07 67.6
6 TraesCS5B01G546900 chr7A 88.265 196 20 2 2316 2508 434777051 434776856 5.830000e-57 231.0
7 TraesCS5B01G546900 chr7A 90.541 148 13 1 2083 2230 434777204 434777058 7.650000e-46 195.0
8 TraesCS5B01G546900 chr1B 88.265 196 20 2 2316 2508 439439037 439438842 5.830000e-57 231.0
9 TraesCS5B01G546900 chr1B 88.265 196 20 2 2316 2508 633760296 633760101 5.830000e-57 231.0
10 TraesCS5B01G546900 chr1B 90.541 148 13 1 2083 2230 439439190 439439044 7.650000e-46 195.0
11 TraesCS5B01G546900 chr1B 90.411 146 13 1 2083 2228 633760449 633760305 9.890000e-45 191.0
12 TraesCS5B01G546900 chr1A 87.437 199 22 2 2313 2508 581639376 581639574 2.710000e-55 226.0
13 TraesCS5B01G546900 chr1A 89.865 148 14 1 2083 2230 581639226 581639372 3.560000e-44 189.0
14 TraesCS5B01G546900 chr3B 86.935 199 23 2 2313 2508 143518418 143518616 1.260000e-53 220.0
15 TraesCS5B01G546900 chr6B 86.631 187 22 2 2325 2508 281010583 281010397 1.270000e-48 204.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G546900 chr5B 700208101 700210807 2706 True 5000.000000 5000 100.000000 1 2707 1 chr5B.!!$R1 2706
1 TraesCS5B01G546900 chr4A 616500387 616502682 2295 False 1242.550000 2412 86.689500 368 2627 2 chr4A.!!$F1 2259
2 TraesCS5B01G546900 chr5D 551922710 551925353 2643 True 863.866667 1681 88.189333 895 2707 3 chr5D.!!$R1 1812

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
176 177 0.03392 TCGCTCTTGCACTGACACAT 59.966 50.0 0.0 0.0 39.64 3.21 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1740 1808 1.079543 GATCGATCGGCCCATGGAG 60.08 63.158 15.22 4.39 0.0 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.678056 TCGGATATAGTGCAACCATCC 57.322 47.619 0.00 0.00 37.80 3.51
22 23 2.969262 TCGGATATAGTGCAACCATCCA 59.031 45.455 14.69 3.74 39.09 3.41
23 24 3.389656 TCGGATATAGTGCAACCATCCAA 59.610 43.478 14.69 0.00 39.09 3.53
24 25 4.133820 CGGATATAGTGCAACCATCCAAA 58.866 43.478 14.69 0.00 39.09 3.28
25 26 4.024048 CGGATATAGTGCAACCATCCAAAC 60.024 45.833 14.69 0.00 39.09 2.93
26 27 4.887071 GGATATAGTGCAACCATCCAAACA 59.113 41.667 11.19 0.00 39.02 2.83
27 28 5.359576 GGATATAGTGCAACCATCCAAACAA 59.640 40.000 11.19 0.00 39.02 2.83
28 29 4.789012 ATAGTGCAACCATCCAAACAAG 57.211 40.909 0.00 0.00 37.80 3.16
29 30 2.387757 AGTGCAACCATCCAAACAAGT 58.612 42.857 0.00 0.00 37.80 3.16
30 31 2.765699 AGTGCAACCATCCAAACAAGTT 59.234 40.909 0.00 0.00 37.80 2.66
31 32 2.865551 GTGCAACCATCCAAACAAGTTG 59.134 45.455 0.00 0.00 40.55 3.16
33 34 2.126467 CAACCATCCAAACAAGTTGCG 58.874 47.619 1.81 0.00 35.74 4.85
34 35 0.673437 ACCATCCAAACAAGTTGCGG 59.327 50.000 1.81 1.37 35.74 5.69
35 36 0.958091 CCATCCAAACAAGTTGCGGA 59.042 50.000 10.68 10.68 35.74 5.54
36 37 1.068333 CCATCCAAACAAGTTGCGGAG 60.068 52.381 13.05 7.02 35.74 4.63
58 59 2.601367 GCTCAAGCCTTGGCCCAA 60.601 61.111 8.17 0.00 34.31 4.12
59 60 2.935740 GCTCAAGCCTTGGCCCAAC 61.936 63.158 8.17 0.00 34.31 3.77
60 61 1.228675 CTCAAGCCTTGGCCCAACT 60.229 57.895 8.17 0.00 0.00 3.16
61 62 0.038166 CTCAAGCCTTGGCCCAACTA 59.962 55.000 8.17 0.00 0.00 2.24
62 63 0.480690 TCAAGCCTTGGCCCAACTAA 59.519 50.000 8.17 0.00 0.00 2.24
63 64 0.603065 CAAGCCTTGGCCCAACTAAC 59.397 55.000 8.17 0.00 0.00 2.34
64 65 0.187361 AAGCCTTGGCCCAACTAACA 59.813 50.000 8.17 0.00 0.00 2.41
65 66 0.539669 AGCCTTGGCCCAACTAACAC 60.540 55.000 8.17 0.00 0.00 3.32
66 67 0.825840 GCCTTGGCCCAACTAACACA 60.826 55.000 0.00 0.00 0.00 3.72
67 68 1.247567 CCTTGGCCCAACTAACACAG 58.752 55.000 0.00 0.00 0.00 3.66
68 69 1.247567 CTTGGCCCAACTAACACAGG 58.752 55.000 0.00 0.00 0.00 4.00
69 70 0.825840 TTGGCCCAACTAACACAGGC 60.826 55.000 0.00 0.00 43.09 4.85
70 71 1.074951 GGCCCAACTAACACAGGCT 59.925 57.895 0.00 0.00 43.36 4.58
71 72 0.960861 GGCCCAACTAACACAGGCTC 60.961 60.000 0.00 0.00 43.36 4.70
72 73 0.960861 GCCCAACTAACACAGGCTCC 60.961 60.000 0.00 0.00 40.57 4.70
73 74 0.400213 CCCAACTAACACAGGCTCCA 59.600 55.000 0.00 0.00 0.00 3.86
74 75 1.523758 CCAACTAACACAGGCTCCAC 58.476 55.000 0.00 0.00 0.00 4.02
75 76 1.072331 CCAACTAACACAGGCTCCACT 59.928 52.381 0.00 0.00 0.00 4.00
76 77 2.146342 CAACTAACACAGGCTCCACTG 58.854 52.381 0.00 0.00 44.03 3.66
77 78 0.035458 ACTAACACAGGCTCCACTGC 59.965 55.000 0.00 0.00 42.21 4.40
78 79 0.035317 CTAACACAGGCTCCACTGCA 59.965 55.000 0.00 0.00 42.21 4.41
79 80 0.692476 TAACACAGGCTCCACTGCAT 59.308 50.000 0.00 0.00 42.21 3.96
80 81 0.607489 AACACAGGCTCCACTGCATC 60.607 55.000 0.00 0.00 42.21 3.91
81 82 1.002990 CACAGGCTCCACTGCATCA 60.003 57.895 0.00 0.00 42.21 3.07
82 83 0.607217 CACAGGCTCCACTGCATCAA 60.607 55.000 0.00 0.00 42.21 2.57
83 84 0.322277 ACAGGCTCCACTGCATCAAG 60.322 55.000 0.00 0.00 42.21 3.02
84 85 0.035725 CAGGCTCCACTGCATCAAGA 60.036 55.000 0.00 0.00 34.04 3.02
85 86 0.035630 AGGCTCCACTGCATCAAGAC 60.036 55.000 0.00 0.00 34.04 3.01
86 87 1.364626 GGCTCCACTGCATCAAGACG 61.365 60.000 0.00 0.00 34.04 4.18
87 88 1.364626 GCTCCACTGCATCAAGACGG 61.365 60.000 0.00 0.00 0.00 4.79
88 89 0.742281 CTCCACTGCATCAAGACGGG 60.742 60.000 0.00 0.00 0.00 5.28
89 90 2.401766 CCACTGCATCAAGACGGGC 61.402 63.158 0.00 0.00 0.00 6.13
90 91 2.045926 ACTGCATCAAGACGGGCC 60.046 61.111 0.00 0.00 0.00 5.80
91 92 2.046023 CTGCATCAAGACGGGCCA 60.046 61.111 4.39 0.00 0.00 5.36
92 93 1.675310 CTGCATCAAGACGGGCCAA 60.675 57.895 4.39 0.00 0.00 4.52
93 94 1.228398 TGCATCAAGACGGGCCAAA 60.228 52.632 4.39 0.00 0.00 3.28
94 95 0.825425 TGCATCAAGACGGGCCAAAA 60.825 50.000 4.39 0.00 0.00 2.44
95 96 0.388520 GCATCAAGACGGGCCAAAAC 60.389 55.000 4.39 0.00 0.00 2.43
96 97 0.109781 CATCAAGACGGGCCAAAACG 60.110 55.000 4.39 0.10 0.00 3.60
98 99 1.008995 CAAGACGGGCCAAAACGTG 60.009 57.895 9.60 0.29 44.24 4.49
99 100 1.153127 AAGACGGGCCAAAACGTGA 60.153 52.632 9.60 0.00 44.24 4.35
100 101 0.748729 AAGACGGGCCAAAACGTGAA 60.749 50.000 9.60 0.00 44.24 3.18
101 102 0.748729 AGACGGGCCAAAACGTGAAA 60.749 50.000 9.60 0.00 44.24 2.69
102 103 0.100861 GACGGGCCAAAACGTGAAAA 59.899 50.000 9.60 0.00 44.24 2.29
103 104 0.179132 ACGGGCCAAAACGTGAAAAC 60.179 50.000 4.39 0.00 42.39 2.43
104 105 0.101579 CGGGCCAAAACGTGAAAACT 59.898 50.000 4.39 0.00 0.00 2.66
105 106 1.470112 CGGGCCAAAACGTGAAAACTT 60.470 47.619 4.39 0.00 0.00 2.66
106 107 1.930503 GGGCCAAAACGTGAAAACTTG 59.069 47.619 4.39 0.00 0.00 3.16
107 108 1.930503 GGCCAAAACGTGAAAACTTGG 59.069 47.619 0.00 0.00 39.66 3.61
108 109 2.612604 GCCAAAACGTGAAAACTTGGT 58.387 42.857 0.00 0.00 39.02 3.67
109 110 2.601314 GCCAAAACGTGAAAACTTGGTC 59.399 45.455 0.00 0.00 39.02 4.02
110 111 2.849473 CCAAAACGTGAAAACTTGGTCG 59.151 45.455 0.00 0.00 33.34 4.79
111 112 3.426426 CCAAAACGTGAAAACTTGGTCGA 60.426 43.478 0.00 0.00 33.34 4.20
112 113 4.347813 CAAAACGTGAAAACTTGGTCGAT 58.652 39.130 0.00 0.00 0.00 3.59
113 114 5.503498 CAAAACGTGAAAACTTGGTCGATA 58.497 37.500 0.00 0.00 0.00 2.92
114 115 5.738118 AAACGTGAAAACTTGGTCGATAA 57.262 34.783 0.00 0.00 0.00 1.75
115 116 4.720530 ACGTGAAAACTTGGTCGATAAC 57.279 40.909 0.00 0.00 0.00 1.89
129 130 4.969816 GTCGATAACCAAACACATCCTTG 58.030 43.478 0.00 0.00 0.00 3.61
130 131 4.693566 GTCGATAACCAAACACATCCTTGA 59.306 41.667 0.00 0.00 0.00 3.02
131 132 5.180492 GTCGATAACCAAACACATCCTTGAA 59.820 40.000 0.00 0.00 0.00 2.69
132 133 5.411361 TCGATAACCAAACACATCCTTGAAG 59.589 40.000 0.00 0.00 0.00 3.02
133 134 5.181245 CGATAACCAAACACATCCTTGAAGT 59.819 40.000 0.00 0.00 0.00 3.01
134 135 6.293955 CGATAACCAAACACATCCTTGAAGTT 60.294 38.462 0.00 0.00 0.00 2.66
135 136 5.675684 AACCAAACACATCCTTGAAGTTT 57.324 34.783 0.00 0.00 36.10 2.66
136 137 6.783708 AACCAAACACATCCTTGAAGTTTA 57.216 33.333 0.00 0.00 34.93 2.01
137 138 6.783708 ACCAAACACATCCTTGAAGTTTAA 57.216 33.333 0.00 0.00 34.93 1.52
138 139 6.805713 ACCAAACACATCCTTGAAGTTTAAG 58.194 36.000 0.44 0.44 34.93 1.85
139 140 6.379988 ACCAAACACATCCTTGAAGTTTAAGT 59.620 34.615 6.64 0.00 34.93 2.24
140 141 6.697019 CCAAACACATCCTTGAAGTTTAAGTG 59.303 38.462 6.64 2.36 34.93 3.16
141 142 7.257722 CAAACACATCCTTGAAGTTTAAGTGT 58.742 34.615 6.64 2.92 39.13 3.55
142 143 7.404671 AACACATCCTTGAAGTTTAAGTGTT 57.595 32.000 6.64 7.95 41.28 3.32
143 144 7.404671 ACACATCCTTGAAGTTTAAGTGTTT 57.595 32.000 6.64 0.00 34.38 2.83
144 145 7.257722 ACACATCCTTGAAGTTTAAGTGTTTG 58.742 34.615 6.64 2.01 34.38 2.93
145 146 6.198966 CACATCCTTGAAGTTTAAGTGTTTGC 59.801 38.462 6.64 0.00 0.00 3.68
146 147 5.906113 TCCTTGAAGTTTAAGTGTTTGCA 57.094 34.783 6.64 0.00 0.00 4.08
147 148 6.463995 TCCTTGAAGTTTAAGTGTTTGCAT 57.536 33.333 6.64 0.00 0.00 3.96
148 149 6.272318 TCCTTGAAGTTTAAGTGTTTGCATG 58.728 36.000 6.64 0.00 0.00 4.06
149 150 5.463061 CCTTGAAGTTTAAGTGTTTGCATGG 59.537 40.000 6.64 0.00 0.00 3.66
150 151 5.843673 TGAAGTTTAAGTGTTTGCATGGA 57.156 34.783 0.00 0.00 0.00 3.41
151 152 5.830912 TGAAGTTTAAGTGTTTGCATGGAG 58.169 37.500 0.00 0.00 0.00 3.86
152 153 5.359576 TGAAGTTTAAGTGTTTGCATGGAGT 59.640 36.000 0.00 0.00 0.00 3.85
153 154 5.852282 AGTTTAAGTGTTTGCATGGAGTT 57.148 34.783 0.00 0.00 0.00 3.01
154 155 5.591099 AGTTTAAGTGTTTGCATGGAGTTG 58.409 37.500 0.00 0.00 0.00 3.16
155 156 5.359576 AGTTTAAGTGTTTGCATGGAGTTGA 59.640 36.000 0.00 0.00 0.00 3.18
156 157 3.715628 AAGTGTTTGCATGGAGTTGAC 57.284 42.857 0.00 0.00 0.00 3.18
157 158 2.936202 AGTGTTTGCATGGAGTTGACT 58.064 42.857 0.00 0.00 0.00 3.41
158 159 2.880890 AGTGTTTGCATGGAGTTGACTC 59.119 45.455 2.51 2.51 42.14 3.36
159 160 1.872952 TGTTTGCATGGAGTTGACTCG 59.127 47.619 5.16 0.00 43.76 4.18
160 161 0.874390 TTTGCATGGAGTTGACTCGC 59.126 50.000 5.16 4.25 43.76 5.03
161 162 0.035317 TTGCATGGAGTTGACTCGCT 59.965 50.000 5.16 0.00 43.76 4.93
162 163 0.390340 TGCATGGAGTTGACTCGCTC 60.390 55.000 5.16 0.00 43.76 5.03
163 164 0.108424 GCATGGAGTTGACTCGCTCT 60.108 55.000 5.16 0.00 43.76 4.09
164 165 1.674221 GCATGGAGTTGACTCGCTCTT 60.674 52.381 5.16 0.00 43.76 2.85
165 166 1.998315 CATGGAGTTGACTCGCTCTTG 59.002 52.381 5.16 0.00 43.76 3.02
166 167 0.319900 TGGAGTTGACTCGCTCTTGC 60.320 55.000 5.16 0.00 43.76 4.01
167 168 0.319900 GGAGTTGACTCGCTCTTGCA 60.320 55.000 5.16 0.00 43.76 4.08
168 169 0.787183 GAGTTGACTCGCTCTTGCAC 59.213 55.000 0.00 0.00 39.64 4.57
169 170 0.390860 AGTTGACTCGCTCTTGCACT 59.609 50.000 0.00 0.00 39.64 4.40
170 171 0.510359 GTTGACTCGCTCTTGCACTG 59.490 55.000 0.00 0.00 39.64 3.66
171 172 0.389025 TTGACTCGCTCTTGCACTGA 59.611 50.000 0.00 0.00 39.64 3.41
172 173 0.319040 TGACTCGCTCTTGCACTGAC 60.319 55.000 0.00 0.00 39.64 3.51
173 174 0.319040 GACTCGCTCTTGCACTGACA 60.319 55.000 0.00 0.00 39.64 3.58
174 175 0.598680 ACTCGCTCTTGCACTGACAC 60.599 55.000 0.00 0.00 39.64 3.67
175 176 0.598419 CTCGCTCTTGCACTGACACA 60.598 55.000 0.00 0.00 39.64 3.72
176 177 0.033920 TCGCTCTTGCACTGACACAT 59.966 50.000 0.00 0.00 39.64 3.21
177 178 0.441533 CGCTCTTGCACTGACACATC 59.558 55.000 0.00 0.00 39.64 3.06
178 179 1.516161 GCTCTTGCACTGACACATCA 58.484 50.000 0.00 0.00 39.41 3.07
179 180 2.082231 GCTCTTGCACTGACACATCAT 58.918 47.619 0.00 0.00 39.41 2.45
180 181 3.264947 GCTCTTGCACTGACACATCATA 58.735 45.455 0.00 0.00 39.41 2.15
181 182 3.309138 GCTCTTGCACTGACACATCATAG 59.691 47.826 0.00 0.00 39.41 2.23
182 183 3.865446 TCTTGCACTGACACATCATAGG 58.135 45.455 0.00 0.00 33.22 2.57
183 184 2.028420 TGCACTGACACATCATAGGC 57.972 50.000 0.00 0.00 33.22 3.93
184 185 1.278699 TGCACTGACACATCATAGGCA 59.721 47.619 0.00 0.00 34.54 4.75
185 186 2.290197 TGCACTGACACATCATAGGCAA 60.290 45.455 0.00 0.00 34.22 4.52
186 187 2.947652 GCACTGACACATCATAGGCAAT 59.052 45.455 0.00 0.00 33.22 3.56
187 188 3.379372 GCACTGACACATCATAGGCAATT 59.621 43.478 0.00 0.00 33.22 2.32
188 189 4.142315 GCACTGACACATCATAGGCAATTT 60.142 41.667 0.00 0.00 33.22 1.82
189 190 5.337554 CACTGACACATCATAGGCAATTTG 58.662 41.667 0.00 0.00 33.22 2.32
190 191 4.400251 ACTGACACATCATAGGCAATTTGG 59.600 41.667 0.00 0.00 33.22 3.28
191 192 3.700539 TGACACATCATAGGCAATTTGGG 59.299 43.478 0.00 0.00 0.00 4.12
192 193 3.033184 ACACATCATAGGCAATTTGGGG 58.967 45.455 0.00 0.00 0.00 4.96
193 194 3.033184 CACATCATAGGCAATTTGGGGT 58.967 45.455 0.00 0.00 0.00 4.95
194 195 3.033184 ACATCATAGGCAATTTGGGGTG 58.967 45.455 0.00 0.00 0.00 4.61
195 196 2.157640 TCATAGGCAATTTGGGGTGG 57.842 50.000 0.00 0.00 0.00 4.61
196 197 0.465287 CATAGGCAATTTGGGGTGGC 59.535 55.000 0.00 0.00 40.46 5.01
197 198 1.042559 ATAGGCAATTTGGGGTGGCG 61.043 55.000 0.00 0.00 44.55 5.69
198 199 4.758251 GGCAATTTGGGGTGGCGC 62.758 66.667 0.00 0.00 0.00 6.53
199 200 3.694538 GCAATTTGGGGTGGCGCT 61.695 61.111 7.64 0.00 0.00 5.92
200 201 2.262292 CAATTTGGGGTGGCGCTG 59.738 61.111 7.64 0.00 0.00 5.18
201 202 3.694538 AATTTGGGGTGGCGCTGC 61.695 61.111 7.64 0.00 0.00 5.25
202 203 4.992740 ATTTGGGGTGGCGCTGCA 62.993 61.111 7.64 0.00 0.00 4.41
217 218 2.591066 CTGCAAGCAAGAGAAGAACG 57.409 50.000 0.00 0.00 0.00 3.95
218 219 2.138320 CTGCAAGCAAGAGAAGAACGA 58.862 47.619 0.00 0.00 0.00 3.85
219 220 2.545526 CTGCAAGCAAGAGAAGAACGAA 59.454 45.455 0.00 0.00 0.00 3.85
220 221 2.287915 TGCAAGCAAGAGAAGAACGAAC 59.712 45.455 0.00 0.00 0.00 3.95
221 222 2.287915 GCAAGCAAGAGAAGAACGAACA 59.712 45.455 0.00 0.00 0.00 3.18
222 223 3.242739 GCAAGCAAGAGAAGAACGAACAA 60.243 43.478 0.00 0.00 0.00 2.83
223 224 4.555511 GCAAGCAAGAGAAGAACGAACAAT 60.556 41.667 0.00 0.00 0.00 2.71
224 225 5.334105 GCAAGCAAGAGAAGAACGAACAATA 60.334 40.000 0.00 0.00 0.00 1.90
225 226 6.658831 CAAGCAAGAGAAGAACGAACAATAA 58.341 36.000 0.00 0.00 0.00 1.40
226 227 6.861065 AGCAAGAGAAGAACGAACAATAAA 57.139 33.333 0.00 0.00 0.00 1.40
227 228 6.659776 AGCAAGAGAAGAACGAACAATAAAC 58.340 36.000 0.00 0.00 0.00 2.01
228 229 5.560378 GCAAGAGAAGAACGAACAATAAACG 59.440 40.000 0.00 0.00 0.00 3.60
229 230 6.563381 GCAAGAGAAGAACGAACAATAAACGA 60.563 38.462 0.00 0.00 0.00 3.85
230 231 7.510630 CAAGAGAAGAACGAACAATAAACGAT 58.489 34.615 0.00 0.00 0.00 3.73
231 232 8.644619 CAAGAGAAGAACGAACAATAAACGATA 58.355 33.333 0.00 0.00 0.00 2.92
232 233 8.170999 AGAGAAGAACGAACAATAAACGATAC 57.829 34.615 0.00 0.00 0.00 2.24
233 234 8.027771 AGAGAAGAACGAACAATAAACGATACT 58.972 33.333 0.00 0.00 0.00 2.12
234 235 9.282247 GAGAAGAACGAACAATAAACGATACTA 57.718 33.333 0.00 0.00 0.00 1.82
235 236 9.798994 AGAAGAACGAACAATAAACGATACTAT 57.201 29.630 0.00 0.00 0.00 2.12
236 237 9.831054 GAAGAACGAACAATAAACGATACTATG 57.169 33.333 0.00 0.00 0.00 2.23
237 238 9.577110 AAGAACGAACAATAAACGATACTATGA 57.423 29.630 0.00 0.00 0.00 2.15
238 239 9.577110 AGAACGAACAATAAACGATACTATGAA 57.423 29.630 0.00 0.00 0.00 2.57
240 241 9.962759 AACGAACAATAAACGATACTATGAAAC 57.037 29.630 0.00 0.00 0.00 2.78
241 242 8.316046 ACGAACAATAAACGATACTATGAAACG 58.684 33.333 0.00 0.00 0.00 3.60
242 243 7.786118 CGAACAATAAACGATACTATGAAACGG 59.214 37.037 0.00 0.00 0.00 4.44
243 244 8.483307 AACAATAAACGATACTATGAAACGGT 57.517 30.769 0.00 0.00 0.00 4.83
244 245 8.483307 ACAATAAACGATACTATGAAACGGTT 57.517 30.769 0.00 0.00 37.61 4.44
245 246 8.938906 ACAATAAACGATACTATGAAACGGTTT 58.061 29.630 5.68 5.68 35.57 3.27
246 247 9.417284 CAATAAACGATACTATGAAACGGTTTC 57.583 33.333 23.27 23.27 40.08 2.78
247 248 6.413018 AAACGATACTATGAAACGGTTTCC 57.587 37.500 25.99 12.05 38.90 3.13
248 249 5.075858 ACGATACTATGAAACGGTTTCCA 57.924 39.130 25.99 16.42 38.90 3.53
249 250 5.481105 ACGATACTATGAAACGGTTTCCAA 58.519 37.500 25.99 15.26 38.90 3.53
250 251 5.579511 ACGATACTATGAAACGGTTTCCAAG 59.420 40.000 25.99 23.36 38.90 3.61
251 252 5.006358 CGATACTATGAAACGGTTTCCAAGG 59.994 44.000 25.99 16.86 38.90 3.61
252 253 3.418047 ACTATGAAACGGTTTCCAAGGG 58.582 45.455 25.99 15.49 38.90 3.95
253 254 2.375014 ATGAAACGGTTTCCAAGGGT 57.625 45.000 25.99 6.93 38.90 4.34
254 255 2.146920 TGAAACGGTTTCCAAGGGTT 57.853 45.000 25.99 0.00 38.90 4.11
255 256 2.458620 TGAAACGGTTTCCAAGGGTTT 58.541 42.857 25.99 0.00 38.90 3.27
256 257 3.629087 TGAAACGGTTTCCAAGGGTTTA 58.371 40.909 25.99 5.90 38.90 2.01
257 258 3.380954 TGAAACGGTTTCCAAGGGTTTAC 59.619 43.478 25.99 2.99 38.90 2.01
258 259 3.301794 AACGGTTTCCAAGGGTTTACT 57.698 42.857 0.00 0.00 0.00 2.24
259 260 4.436113 AACGGTTTCCAAGGGTTTACTA 57.564 40.909 0.00 0.00 0.00 1.82
260 261 4.645863 ACGGTTTCCAAGGGTTTACTAT 57.354 40.909 0.00 0.00 0.00 2.12
261 262 5.760484 ACGGTTTCCAAGGGTTTACTATA 57.240 39.130 0.00 0.00 0.00 1.31
262 263 5.737860 ACGGTTTCCAAGGGTTTACTATAG 58.262 41.667 0.00 0.00 0.00 1.31
263 264 5.121105 CGGTTTCCAAGGGTTTACTATAGG 58.879 45.833 4.43 0.00 0.00 2.57
264 265 5.104817 CGGTTTCCAAGGGTTTACTATAGGA 60.105 44.000 4.43 0.00 0.00 2.94
265 266 6.576840 CGGTTTCCAAGGGTTTACTATAGGAA 60.577 42.308 4.43 0.00 32.51 3.36
266 267 7.177184 GGTTTCCAAGGGTTTACTATAGGAAA 58.823 38.462 6.00 6.00 40.45 3.13
267 268 7.837689 GGTTTCCAAGGGTTTACTATAGGAAAT 59.162 37.037 13.30 0.00 43.34 2.17
268 269 9.251440 GTTTCCAAGGGTTTACTATAGGAAATT 57.749 33.333 13.30 1.49 43.34 1.82
269 270 8.817092 TTCCAAGGGTTTACTATAGGAAATTG 57.183 34.615 13.30 12.84 31.52 2.32
270 271 8.165267 TCCAAGGGTTTACTATAGGAAATTGA 57.835 34.615 18.08 6.62 0.00 2.57
271 272 8.787818 TCCAAGGGTTTACTATAGGAAATTGAT 58.212 33.333 18.08 4.24 0.00 2.57
272 273 8.850156 CCAAGGGTTTACTATAGGAAATTGATG 58.150 37.037 18.08 13.06 0.00 3.07
273 274 9.408648 CAAGGGTTTACTATAGGAAATTGATGT 57.591 33.333 13.30 0.00 0.00 3.06
274 275 9.628500 AAGGGTTTACTATAGGAAATTGATGTC 57.372 33.333 13.30 0.00 0.00 3.06
275 276 8.778059 AGGGTTTACTATAGGAAATTGATGTCA 58.222 33.333 13.30 0.00 0.00 3.58
276 277 9.403583 GGGTTTACTATAGGAAATTGATGTCAA 57.596 33.333 13.30 0.00 40.51 3.18
278 279 9.916397 GTTTACTATAGGAAATTGATGTCAACG 57.084 33.333 13.30 0.00 38.86 4.10
279 280 9.878667 TTTACTATAGGAAATTGATGTCAACGA 57.121 29.630 6.00 0.00 38.86 3.85
294 295 4.406648 TCAACGATATGACATGCCTCTT 57.593 40.909 0.00 0.00 0.00 2.85
295 296 4.769688 TCAACGATATGACATGCCTCTTT 58.230 39.130 0.00 0.00 0.00 2.52
296 297 5.185454 TCAACGATATGACATGCCTCTTTT 58.815 37.500 0.00 0.00 0.00 2.27
297 298 5.065090 TCAACGATATGACATGCCTCTTTTG 59.935 40.000 0.00 0.51 0.00 2.44
298 299 3.879295 ACGATATGACATGCCTCTTTTGG 59.121 43.478 0.00 0.00 0.00 3.28
299 300 3.251729 CGATATGACATGCCTCTTTTGGG 59.748 47.826 0.00 0.00 0.00 4.12
305 306 4.319133 GCCTCTTTTGGGCGATGA 57.681 55.556 0.00 0.00 40.19 2.92
306 307 2.799176 GCCTCTTTTGGGCGATGAT 58.201 52.632 0.00 0.00 40.19 2.45
307 308 0.665298 GCCTCTTTTGGGCGATGATC 59.335 55.000 0.00 0.00 40.19 2.92
308 309 0.940126 CCTCTTTTGGGCGATGATCG 59.060 55.000 11.02 11.02 43.89 3.69
309 310 0.940126 CTCTTTTGGGCGATGATCGG 59.060 55.000 17.27 0.00 40.84 4.18
310 311 0.251916 TCTTTTGGGCGATGATCGGT 59.748 50.000 17.27 0.00 40.84 4.69
311 312 0.378257 CTTTTGGGCGATGATCGGTG 59.622 55.000 17.27 0.00 40.84 4.94
312 313 1.029408 TTTTGGGCGATGATCGGTGG 61.029 55.000 17.27 0.00 40.84 4.61
313 314 4.545706 TGGGCGATGATCGGTGGC 62.546 66.667 17.27 0.24 40.84 5.01
314 315 4.241555 GGGCGATGATCGGTGGCT 62.242 66.667 17.27 0.00 40.84 4.75
315 316 2.663188 GGCGATGATCGGTGGCTC 60.663 66.667 17.27 0.00 40.84 4.70
316 317 2.663188 GCGATGATCGGTGGCTCC 60.663 66.667 17.27 0.00 40.84 4.70
330 331 2.671070 CTCCGGAGCCACCAACAT 59.329 61.111 20.67 0.00 38.90 2.71
331 332 1.904771 CTCCGGAGCCACCAACATA 59.095 57.895 20.67 0.00 38.90 2.29
332 333 0.469917 CTCCGGAGCCACCAACATAT 59.530 55.000 20.67 0.00 38.90 1.78
333 334 0.468226 TCCGGAGCCACCAACATATC 59.532 55.000 0.00 0.00 38.90 1.63
334 335 0.180171 CCGGAGCCACCAACATATCA 59.820 55.000 0.00 0.00 38.90 2.15
335 336 1.299541 CGGAGCCACCAACATATCAC 58.700 55.000 0.00 0.00 38.90 3.06
336 337 1.406751 CGGAGCCACCAACATATCACA 60.407 52.381 0.00 0.00 38.90 3.58
337 338 2.722094 GGAGCCACCAACATATCACAA 58.278 47.619 0.00 0.00 38.79 3.33
338 339 2.423538 GGAGCCACCAACATATCACAAC 59.576 50.000 0.00 0.00 38.79 3.32
339 340 2.423538 GAGCCACCAACATATCACAACC 59.576 50.000 0.00 0.00 0.00 3.77
340 341 2.166829 GCCACCAACATATCACAACCA 58.833 47.619 0.00 0.00 0.00 3.67
341 342 2.560542 GCCACCAACATATCACAACCAA 59.439 45.455 0.00 0.00 0.00 3.67
342 343 3.006323 GCCACCAACATATCACAACCAAA 59.994 43.478 0.00 0.00 0.00 3.28
343 344 4.502259 GCCACCAACATATCACAACCAAAA 60.502 41.667 0.00 0.00 0.00 2.44
344 345 5.605534 CCACCAACATATCACAACCAAAAA 58.394 37.500 0.00 0.00 0.00 1.94
345 346 6.229733 CCACCAACATATCACAACCAAAAAT 58.770 36.000 0.00 0.00 0.00 1.82
346 347 6.147492 CCACCAACATATCACAACCAAAAATG 59.853 38.462 0.00 0.00 0.00 2.32
347 348 6.705381 CACCAACATATCACAACCAAAAATGT 59.295 34.615 0.00 0.00 0.00 2.71
348 349 7.869937 CACCAACATATCACAACCAAAAATGTA 59.130 33.333 0.00 0.00 0.00 2.29
349 350 8.424918 ACCAACATATCACAACCAAAAATGTAA 58.575 29.630 0.00 0.00 0.00 2.41
350 351 8.707839 CCAACATATCACAACCAAAAATGTAAC 58.292 33.333 0.00 0.00 0.00 2.50
351 352 9.474920 CAACATATCACAACCAAAAATGTAACT 57.525 29.630 0.00 0.00 0.00 2.24
352 353 9.474920 AACATATCACAACCAAAAATGTAACTG 57.525 29.630 0.00 0.00 0.00 3.16
353 354 8.855110 ACATATCACAACCAAAAATGTAACTGA 58.145 29.630 0.00 0.00 0.00 3.41
354 355 9.345517 CATATCACAACCAAAAATGTAACTGAG 57.654 33.333 0.00 0.00 0.00 3.35
355 356 7.581213 ATCACAACCAAAAATGTAACTGAGA 57.419 32.000 0.00 0.00 0.00 3.27
356 357 7.581213 TCACAACCAAAAATGTAACTGAGAT 57.419 32.000 0.00 0.00 0.00 2.75
357 358 8.684386 TCACAACCAAAAATGTAACTGAGATA 57.316 30.769 0.00 0.00 0.00 1.98
358 359 9.295825 TCACAACCAAAAATGTAACTGAGATAT 57.704 29.630 0.00 0.00 0.00 1.63
359 360 9.345517 CACAACCAAAAATGTAACTGAGATATG 57.654 33.333 0.00 0.00 0.00 1.78
360 361 8.522830 ACAACCAAAAATGTAACTGAGATATGG 58.477 33.333 0.00 0.00 0.00 2.74
361 362 7.645058 ACCAAAAATGTAACTGAGATATGGG 57.355 36.000 0.00 0.00 0.00 4.00
362 363 7.182060 ACCAAAAATGTAACTGAGATATGGGT 58.818 34.615 0.00 0.00 0.00 4.51
363 364 7.339466 ACCAAAAATGTAACTGAGATATGGGTC 59.661 37.037 0.00 0.00 0.00 4.46
364 365 7.339212 CCAAAAATGTAACTGAGATATGGGTCA 59.661 37.037 0.00 0.00 0.00 4.02
365 366 7.865706 AAAATGTAACTGAGATATGGGTCAC 57.134 36.000 0.00 0.00 0.00 3.67
366 367 6.560003 AATGTAACTGAGATATGGGTCACA 57.440 37.500 0.00 0.00 0.00 3.58
367 368 6.560003 ATGTAACTGAGATATGGGTCACAA 57.440 37.500 0.00 0.00 0.00 3.33
368 369 5.977635 TGTAACTGAGATATGGGTCACAAG 58.022 41.667 0.00 0.00 0.00 3.16
369 370 5.483937 TGTAACTGAGATATGGGTCACAAGT 59.516 40.000 0.00 0.00 0.00 3.16
370 371 4.478206 ACTGAGATATGGGTCACAAGTG 57.522 45.455 0.00 0.00 0.00 3.16
371 372 3.840666 ACTGAGATATGGGTCACAAGTGT 59.159 43.478 0.00 0.00 0.00 3.55
372 373 4.287067 ACTGAGATATGGGTCACAAGTGTT 59.713 41.667 0.00 0.00 0.00 3.32
373 374 5.221925 ACTGAGATATGGGTCACAAGTGTTT 60.222 40.000 0.00 0.00 0.00 2.83
374 375 5.245531 TGAGATATGGGTCACAAGTGTTTC 58.754 41.667 0.00 0.00 0.00 2.78
384 385 4.398044 GTCACAAGTGTTTCTTTTCCTCCA 59.602 41.667 0.00 0.00 33.63 3.86
423 424 0.310854 CCTCGACAAAAAGTGGGTGC 59.689 55.000 0.00 0.00 0.00 5.01
426 427 0.938713 CGACAAAAAGTGGGTGCGTA 59.061 50.000 0.00 0.00 0.00 4.42
432 433 3.546714 AAGTGGGTGCGTAGGCCAC 62.547 63.158 5.01 6.10 38.85 5.01
487 488 1.295423 GGCTTCCCGTGCTTACTCA 59.705 57.895 0.00 0.00 0.00 3.41
494 495 1.406069 CCCGTGCTTACTCATGCTCTT 60.406 52.381 0.00 0.00 0.00 2.85
497 498 3.553511 CCGTGCTTACTCATGCTCTTTAG 59.446 47.826 0.00 0.00 0.00 1.85
504 505 4.640771 ACTCATGCTCTTTAGGAAACCA 57.359 40.909 0.00 0.00 0.00 3.67
506 507 4.287067 ACTCATGCTCTTTAGGAAACCAGA 59.713 41.667 0.00 0.00 0.00 3.86
510 511 5.241403 TGCTCTTTAGGAAACCAGATGAA 57.759 39.130 0.00 0.00 0.00 2.57
512 513 6.068010 TGCTCTTTAGGAAACCAGATGAAAA 58.932 36.000 0.00 0.00 0.00 2.29
513 514 6.016276 TGCTCTTTAGGAAACCAGATGAAAAC 60.016 38.462 0.00 0.00 0.00 2.43
514 515 6.016276 GCTCTTTAGGAAACCAGATGAAAACA 60.016 38.462 0.00 0.00 0.00 2.83
515 516 7.510549 TCTTTAGGAAACCAGATGAAAACAG 57.489 36.000 0.00 0.00 0.00 3.16
516 517 7.060421 TCTTTAGGAAACCAGATGAAAACAGT 58.940 34.615 0.00 0.00 0.00 3.55
517 518 8.215050 TCTTTAGGAAACCAGATGAAAACAGTA 58.785 33.333 0.00 0.00 0.00 2.74
518 519 8.754991 TTTAGGAAACCAGATGAAAACAGTAA 57.245 30.769 0.00 0.00 0.00 2.24
519 520 6.635030 AGGAAACCAGATGAAAACAGTAAC 57.365 37.500 0.00 0.00 0.00 2.50
520 521 6.126409 AGGAAACCAGATGAAAACAGTAACA 58.874 36.000 0.00 0.00 0.00 2.41
542 543 2.939103 ACATGCCTCTTTTAGACGATGC 59.061 45.455 0.00 0.00 0.00 3.91
551 552 3.637998 TTTAGACGATGCTCGGTATCC 57.362 47.619 9.75 0.00 45.59 2.59
574 575 2.610479 CGAGCCGCTGACATACCATAAT 60.610 50.000 0.00 0.00 0.00 1.28
581 582 4.666512 GCTGACATACCATAATGGGGAAT 58.333 43.478 0.00 0.00 43.37 3.01
613 614 1.210155 GGCTCGCACGCATTTCTTT 59.790 52.632 0.00 0.00 0.00 2.52
615 616 0.794605 GCTCGCACGCATTTCTTTCC 60.795 55.000 0.00 0.00 0.00 3.13
621 622 0.323451 ACGCATTTCTTTCCCCTCCC 60.323 55.000 0.00 0.00 0.00 4.30
625 626 2.552231 ATTTCTTTCCCCTCCCGGCG 62.552 60.000 0.00 0.00 0.00 6.46
644 645 3.857038 GGAGGCGCGGGGAATGTA 61.857 66.667 8.83 0.00 0.00 2.29
652 653 0.808847 GCGGGGAATGTAACGGAGAC 60.809 60.000 0.00 0.00 0.00 3.36
654 655 1.738030 CGGGGAATGTAACGGAGACAC 60.738 57.143 0.00 0.00 0.00 3.67
657 658 0.997196 GAATGTAACGGAGACACGGC 59.003 55.000 0.00 0.00 38.39 5.68
675 676 0.726118 GCTCGCAAGCGTTTCTTTCC 60.726 55.000 14.57 0.00 39.10 3.13
679 680 0.241213 GCAAGCGTTTCTTTCCCCTC 59.759 55.000 0.00 0.00 31.27 4.30
684 685 1.677966 GTTTCTTTCCCCTCCCGGC 60.678 63.158 0.00 0.00 0.00 6.13
685 686 3.262448 TTTCTTTCCCCTCCCGGCG 62.262 63.158 0.00 0.00 0.00 6.46
686 687 4.707768 TCTTTCCCCTCCCGGCGA 62.708 66.667 9.30 0.00 0.00 5.54
708 709 2.027073 GGCGTGTGCAATCTCGACA 61.027 57.895 3.32 0.00 45.35 4.35
710 711 1.959899 GCGTGTGCAATCTCGACAGG 61.960 60.000 3.32 0.00 42.15 4.00
717 718 2.009042 GCAATCTCGACAGGAAGTGGG 61.009 57.143 0.00 0.00 0.00 4.61
718 719 0.905357 AATCTCGACAGGAAGTGGGG 59.095 55.000 0.00 0.00 0.00 4.96
719 720 1.617947 ATCTCGACAGGAAGTGGGGC 61.618 60.000 0.00 0.00 0.00 5.80
720 721 3.649277 CTCGACAGGAAGTGGGGCG 62.649 68.421 0.00 0.00 0.00 6.13
752 753 2.731348 GCGATCCGACGGCTCATC 60.731 66.667 17.26 10.66 0.00 2.92
772 773 1.454663 GGCTTCCCCTCAATGCTCC 60.455 63.158 0.00 0.00 0.00 4.70
777 778 0.035439 TCCCCTCAATGCTCCGTTTC 60.035 55.000 0.00 0.00 0.00 2.78
778 779 1.369091 CCCCTCAATGCTCCGTTTCG 61.369 60.000 0.00 0.00 0.00 3.46
781 782 1.002366 CTCAATGCTCCGTTTCGAGG 58.998 55.000 0.00 0.00 0.00 4.63
782 783 1.019278 TCAATGCTCCGTTTCGAGGC 61.019 55.000 0.00 0.00 0.00 4.70
783 784 1.745489 AATGCTCCGTTTCGAGGCC 60.745 57.895 0.00 0.00 0.00 5.19
784 785 2.463589 AATGCTCCGTTTCGAGGCCA 62.464 55.000 5.01 0.00 0.00 5.36
786 787 2.657237 CTCCGTTTCGAGGCCACT 59.343 61.111 5.01 0.00 0.00 4.00
787 788 1.888018 CTCCGTTTCGAGGCCACTA 59.112 57.895 5.01 0.00 0.00 2.74
788 789 0.179134 CTCCGTTTCGAGGCCACTAG 60.179 60.000 5.01 0.00 0.00 2.57
789 790 1.810030 CCGTTTCGAGGCCACTAGC 60.810 63.158 5.01 0.00 42.60 3.42
791 792 1.080025 GTTTCGAGGCCACTAGCGT 60.080 57.895 5.01 0.00 45.17 5.07
792 793 0.669625 GTTTCGAGGCCACTAGCGTT 60.670 55.000 5.01 0.00 45.17 4.84
793 794 0.389426 TTTCGAGGCCACTAGCGTTC 60.389 55.000 5.01 0.00 45.17 3.95
794 795 1.529152 TTCGAGGCCACTAGCGTTCA 61.529 55.000 5.01 0.00 45.17 3.18
795 796 1.080093 CGAGGCCACTAGCGTTCAA 60.080 57.895 5.01 0.00 45.17 2.69
796 797 0.669318 CGAGGCCACTAGCGTTCAAA 60.669 55.000 5.01 0.00 45.17 2.69
797 798 0.796927 GAGGCCACTAGCGTTCAAAC 59.203 55.000 5.01 0.00 45.17 2.93
857 885 1.082366 CCTGAAAACGGCGAAACGG 60.082 57.895 16.62 6.93 38.39 4.44
858 886 1.500512 CCTGAAAACGGCGAAACGGA 61.501 55.000 16.62 0.00 38.39 4.69
859 887 0.110823 CTGAAAACGGCGAAACGGAG 60.111 55.000 16.62 0.00 38.39 4.63
860 888 0.530211 TGAAAACGGCGAAACGGAGA 60.530 50.000 16.62 0.00 38.39 3.71
861 889 0.163146 GAAAACGGCGAAACGGAGAG 59.837 55.000 16.62 0.00 38.39 3.20
862 890 1.838568 AAAACGGCGAAACGGAGAGC 61.839 55.000 16.62 0.00 38.39 4.09
863 891 2.981977 AAACGGCGAAACGGAGAGCA 62.982 55.000 16.62 0.00 38.39 4.26
864 892 3.479269 CGGCGAAACGGAGAGCAC 61.479 66.667 0.00 0.00 0.00 4.40
865 893 2.048127 GGCGAAACGGAGAGCACT 60.048 61.111 0.00 0.00 0.00 4.40
866 894 1.214589 GGCGAAACGGAGAGCACTA 59.785 57.895 0.00 0.00 0.00 2.74
867 895 0.802607 GGCGAAACGGAGAGCACTAG 60.803 60.000 0.00 0.00 0.00 2.57
868 896 0.109226 GCGAAACGGAGAGCACTAGT 60.109 55.000 0.00 0.00 0.00 2.57
869 897 1.131883 GCGAAACGGAGAGCACTAGTA 59.868 52.381 0.00 0.00 0.00 1.82
870 898 2.783333 CGAAACGGAGAGCACTAGTAC 58.217 52.381 0.00 0.00 0.00 2.73
871 899 2.419324 CGAAACGGAGAGCACTAGTACT 59.581 50.000 0.00 0.00 0.00 2.73
872 900 3.485546 CGAAACGGAGAGCACTAGTACTC 60.486 52.174 14.37 14.37 0.00 2.59
873 901 1.654317 ACGGAGAGCACTAGTACTCG 58.346 55.000 15.89 8.87 37.99 4.18
874 902 1.066286 ACGGAGAGCACTAGTACTCGT 60.066 52.381 15.89 9.45 37.99 4.18
875 903 1.328069 CGGAGAGCACTAGTACTCGTG 59.672 57.143 20.26 20.26 37.99 4.35
876 904 2.358015 GGAGAGCACTAGTACTCGTGT 58.642 52.381 23.82 13.52 37.99 4.49
877 905 2.748532 GGAGAGCACTAGTACTCGTGTT 59.251 50.000 23.82 19.85 37.99 3.32
878 906 3.426426 GGAGAGCACTAGTACTCGTGTTG 60.426 52.174 23.82 4.63 37.99 3.33
879 907 2.488545 AGAGCACTAGTACTCGTGTTGG 59.511 50.000 23.82 4.26 37.99 3.77
880 908 2.486982 GAGCACTAGTACTCGTGTTGGA 59.513 50.000 23.82 0.00 33.78 3.53
964 1012 2.509422 CCGCCCCTAAACCCTAGC 59.491 66.667 0.00 0.00 0.00 3.42
985 1033 2.162608 CCTAGAAGCGGAATCGATCGAT 59.837 50.000 24.60 24.60 39.00 3.59
987 1035 1.068194 AGAAGCGGAATCGATCGATCC 60.068 52.381 29.48 26.62 39.00 3.36
1173 1221 1.807573 CGCGCTCTCCAAGAAGGTC 60.808 63.158 5.56 0.00 39.02 3.85
1626 1692 1.152567 CCAGAGGCCCCAACAACAA 60.153 57.895 0.00 0.00 0.00 2.83
1656 1722 2.264794 GAGTCGACACCGGCCAAT 59.735 61.111 19.50 0.00 42.24 3.16
1668 1734 0.248621 CGGCCAATTCCAAGAATCGC 60.249 55.000 2.24 0.00 0.00 4.58
1740 1808 2.459442 GCTGACGGCTGCTCATCAC 61.459 63.158 13.62 0.00 38.06 3.06
1764 1833 0.033920 TGGGCCGATCGATCAAGATG 59.966 55.000 24.40 8.12 0.00 2.90
1788 1857 1.915228 GGCCTGATGGTGCCTAGAA 59.085 57.895 0.00 0.00 44.46 2.10
1792 1861 2.620585 GCCTGATGGTGCCTAGAATTTC 59.379 50.000 0.00 0.00 35.27 2.17
1793 1862 3.686691 GCCTGATGGTGCCTAGAATTTCT 60.687 47.826 4.03 4.03 35.27 2.52
1798 1867 5.418840 TGATGGTGCCTAGAATTTCTTTTCC 59.581 40.000 3.86 2.40 0.00 3.13
1875 1945 4.787083 GTGAGAACTAACGTACAGATGTCG 59.213 45.833 4.23 0.00 0.00 4.35
1924 1995 6.494893 TTGGTTTCAGTTTCGATTCCTATG 57.505 37.500 0.00 0.00 0.00 2.23
1925 1996 5.556915 TGGTTTCAGTTTCGATTCCTATGT 58.443 37.500 0.00 0.00 0.00 2.29
1926 1997 6.703319 TGGTTTCAGTTTCGATTCCTATGTA 58.297 36.000 0.00 0.00 0.00 2.29
1957 2028 1.734465 CAGTCCAGTTTTGATCTCGGC 59.266 52.381 0.00 0.00 0.00 5.54
1979 2853 3.743584 CGAGGTGAATGATGATCCTGCTT 60.744 47.826 0.00 0.00 0.00 3.91
1980 2854 4.502087 CGAGGTGAATGATGATCCTGCTTA 60.502 45.833 0.00 0.00 0.00 3.09
2017 2891 6.578944 TCGGTTGAAAGCTAATCTTGCTATA 58.421 36.000 0.00 0.00 40.22 1.31
2019 2893 6.257849 CGGTTGAAAGCTAATCTTGCTATACA 59.742 38.462 0.00 0.00 40.22 2.29
2037 2911 6.094048 GCTATACAGCTTCAGGAATTTGTTCA 59.906 38.462 0.00 0.00 44.93 3.18
2118 3038 3.131933 CGATTCCTCTGTTGATCAGTCCT 59.868 47.826 0.00 0.00 43.97 3.85
2183 3103 0.390124 GGTCATGGGGCGTAATCGTA 59.610 55.000 0.00 0.00 39.49 3.43
2232 3152 8.519799 TCTTTCCTTATTCAGTGTTTCAGTTT 57.480 30.769 0.00 0.00 0.00 2.66
2273 3194 2.575532 CTCCTGTTTTCTTGAGTGGCA 58.424 47.619 0.00 0.00 0.00 4.92
2274 3195 2.551459 CTCCTGTTTTCTTGAGTGGCAG 59.449 50.000 0.00 0.00 0.00 4.85
2297 3218 7.601856 CAGAAATACTGGCCAAGTTTTGAATA 58.398 34.615 7.01 0.00 42.39 1.75
2311 3232 9.146984 CAAGTTTTGAATAGCATGATCATGTTT 57.853 29.630 31.09 22.81 40.80 2.83
2319 3240 7.818997 ATAGCATGATCATGTTTTCAGATGT 57.181 32.000 31.09 3.43 40.80 3.06
2320 3241 5.891451 AGCATGATCATGTTTTCAGATGTG 58.109 37.500 31.09 8.42 40.80 3.21
2330 3251 8.628280 TCATGTTTTCAGATGTGTCAATACAAA 58.372 29.630 0.00 0.00 37.36 2.83
2340 3261 8.572828 GATGTGTCAATACAAATCAAACACAA 57.427 30.769 9.18 0.00 45.99 3.33
2399 3324 4.226427 AGGAGCATCTTGATTGTAAGCA 57.774 40.909 0.00 0.00 33.73 3.91
2410 3335 5.050644 TGATTGTAAGCATTGCACTGAAG 57.949 39.130 11.91 0.00 41.45 3.02
2439 3367 6.738832 ACATGAAAGATGACACATTCAGAG 57.261 37.500 0.00 4.21 37.77 3.35
2445 3373 2.724977 TGACACATTCAGAGTCCGAC 57.275 50.000 0.00 0.00 37.07 4.79
2459 3387 1.798813 GTCCGACAAAAATCTGAGCGT 59.201 47.619 0.00 0.00 0.00 5.07
2470 3398 4.284860 TGAGCGTGCGCACACTCT 62.285 61.111 41.60 32.39 44.40 3.24
2509 3437 0.668535 GTTCAGCCCAGTGGTTTCAC 59.331 55.000 8.74 0.00 43.93 3.18
2528 3456 4.380531 TCACGCTTTCAGTTTTGATCTCT 58.619 39.130 0.00 0.00 32.27 3.10
2536 3465 3.055891 TCAGTTTTGATCTCTGGCGATCA 60.056 43.478 0.00 0.00 45.84 2.92
2544 3473 3.309961 TCTCTGGCGATCATGCTTATC 57.690 47.619 0.00 0.00 34.52 1.75
2573 3502 4.937620 TGCTCGATTGAAAGCTATTCTTGT 59.062 37.500 9.17 0.00 39.31 3.16
2578 3507 8.142994 TCGATTGAAAGCTATTCTTGTTATCC 57.857 34.615 9.17 0.00 34.67 2.59
2582 3511 6.418101 TGAAAGCTATTCTTGTTATCCTGCT 58.582 36.000 9.17 0.00 34.67 4.24
2583 3512 7.564793 TGAAAGCTATTCTTGTTATCCTGCTA 58.435 34.615 9.17 0.00 34.67 3.49
2627 3556 3.552890 GGGGTGCAATTGTCTCTGTTTTC 60.553 47.826 7.40 0.00 0.00 2.29
2628 3557 3.552890 GGGTGCAATTGTCTCTGTTTTCC 60.553 47.826 7.40 0.00 0.00 3.13
2637 3566 3.250762 TGTCTCTGTTTTCCGAATTGCAG 59.749 43.478 0.00 0.00 0.00 4.41
2641 3570 3.440173 TCTGTTTTCCGAATTGCAGGATC 59.560 43.478 0.00 0.00 36.28 3.36
2642 3571 3.420893 TGTTTTCCGAATTGCAGGATCT 58.579 40.909 0.00 0.00 36.28 2.75
2647 3576 2.435437 TCCGAATTGCAGGATCTCATGA 59.565 45.455 0.00 0.00 0.00 3.07
2649 3578 3.819337 CCGAATTGCAGGATCTCATGAAT 59.181 43.478 0.00 0.00 0.00 2.57
2650 3579 4.083431 CCGAATTGCAGGATCTCATGAATC 60.083 45.833 0.00 3.34 0.00 2.52
2660 3589 7.763528 GCAGGATCTCATGAATCGAGTATTTAT 59.236 37.037 0.00 0.00 0.00 1.40
2661 3590 9.650539 CAGGATCTCATGAATCGAGTATTTATT 57.349 33.333 0.00 0.00 0.00 1.40
2663 3592 9.868277 GGATCTCATGAATCGAGTATTTATTCT 57.132 33.333 0.00 0.00 32.12 2.40
2666 3595 9.468532 TCTCATGAATCGAGTATTTATTCTGTG 57.531 33.333 0.00 0.00 32.12 3.66
2691 3620 8.926374 TGGTGTATAGTTATTCGATTCCCTTTA 58.074 33.333 0.00 0.00 0.00 1.85
2693 3622 8.923683 GTGTATAGTTATTCGATTCCCTTTAGC 58.076 37.037 0.00 0.00 0.00 3.09
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 2.969262 TGGATGGTTGCACTATATCCGA 59.031 45.455 11.60 2.35 40.08 4.55
2 3 3.401033 TGGATGGTTGCACTATATCCG 57.599 47.619 11.60 0.00 40.08 4.18
3 4 4.887071 TGTTTGGATGGTTGCACTATATCC 59.113 41.667 10.14 10.14 38.20 2.59
4 5 6.095440 ACTTGTTTGGATGGTTGCACTATATC 59.905 38.462 0.00 0.00 0.00 1.63
5 6 5.951747 ACTTGTTTGGATGGTTGCACTATAT 59.048 36.000 0.00 0.00 0.00 0.86
6 7 5.321102 ACTTGTTTGGATGGTTGCACTATA 58.679 37.500 0.00 0.00 0.00 1.31
7 8 4.151883 ACTTGTTTGGATGGTTGCACTAT 58.848 39.130 0.00 0.00 0.00 2.12
8 9 3.561143 ACTTGTTTGGATGGTTGCACTA 58.439 40.909 0.00 0.00 0.00 2.74
9 10 2.387757 ACTTGTTTGGATGGTTGCACT 58.612 42.857 0.00 0.00 0.00 4.40
10 11 2.865551 CAACTTGTTTGGATGGTTGCAC 59.134 45.455 0.00 0.00 32.50 4.57
11 12 3.176552 CAACTTGTTTGGATGGTTGCA 57.823 42.857 0.00 0.00 32.50 4.08
13 14 2.126467 CGCAACTTGTTTGGATGGTTG 58.874 47.619 0.00 0.00 39.83 3.77
14 15 1.068434 CCGCAACTTGTTTGGATGGTT 59.932 47.619 0.00 0.00 35.51 3.67
15 16 0.673437 CCGCAACTTGTTTGGATGGT 59.327 50.000 0.00 0.00 35.51 3.55
16 17 0.958091 TCCGCAACTTGTTTGGATGG 59.042 50.000 1.47 0.00 35.51 3.51
17 18 1.666888 GCTCCGCAACTTGTTTGGATG 60.667 52.381 5.15 2.70 35.51 3.51
18 19 0.598065 GCTCCGCAACTTGTTTGGAT 59.402 50.000 5.15 0.00 35.51 3.41
19 20 0.749818 TGCTCCGCAACTTGTTTGGA 60.750 50.000 4.75 4.75 34.76 3.53
20 21 0.314935 ATGCTCCGCAACTTGTTTGG 59.685 50.000 0.00 0.00 43.62 3.28
21 22 1.411394 CATGCTCCGCAACTTGTTTG 58.589 50.000 0.00 0.00 43.62 2.93
22 23 0.314935 CCATGCTCCGCAACTTGTTT 59.685 50.000 0.00 0.00 43.62 2.83
23 24 1.959085 CCATGCTCCGCAACTTGTT 59.041 52.632 0.00 0.00 43.62 2.83
24 25 2.629656 GCCATGCTCCGCAACTTGT 61.630 57.895 0.00 0.00 43.62 3.16
25 26 2.180017 GCCATGCTCCGCAACTTG 59.820 61.111 0.00 0.00 43.62 3.16
26 27 2.034687 AGCCATGCTCCGCAACTT 59.965 55.556 0.00 0.00 43.62 2.66
41 42 2.601367 TTGGGCCAAGGCTTGAGC 60.601 61.111 28.18 25.66 41.60 4.26
42 43 0.038166 TAGTTGGGCCAAGGCTTGAG 59.962 55.000 28.18 18.22 41.60 3.02
43 44 0.480690 TTAGTTGGGCCAAGGCTTGA 59.519 50.000 28.18 5.48 41.60 3.02
44 45 0.603065 GTTAGTTGGGCCAAGGCTTG 59.397 55.000 21.62 20.31 41.60 4.01
45 46 0.187361 TGTTAGTTGGGCCAAGGCTT 59.813 50.000 21.62 8.42 41.60 4.35
46 47 0.539669 GTGTTAGTTGGGCCAAGGCT 60.540 55.000 21.62 16.71 41.60 4.58
47 48 0.825840 TGTGTTAGTTGGGCCAAGGC 60.826 55.000 21.62 9.21 41.06 4.35
48 49 1.247567 CTGTGTTAGTTGGGCCAAGG 58.752 55.000 21.62 0.00 0.00 3.61
49 50 1.247567 CCTGTGTTAGTTGGGCCAAG 58.752 55.000 21.62 4.74 0.00 3.61
50 51 0.825840 GCCTGTGTTAGTTGGGCCAA 60.826 55.000 16.66 16.66 37.12 4.52
51 52 1.228429 GCCTGTGTTAGTTGGGCCA 60.228 57.895 0.00 0.00 37.12 5.36
52 53 0.960861 GAGCCTGTGTTAGTTGGGCC 60.961 60.000 0.00 0.00 43.36 5.80
53 54 0.960861 GGAGCCTGTGTTAGTTGGGC 60.961 60.000 0.00 0.00 42.74 5.36
54 55 0.400213 TGGAGCCTGTGTTAGTTGGG 59.600 55.000 0.00 0.00 0.00 4.12
55 56 1.072331 AGTGGAGCCTGTGTTAGTTGG 59.928 52.381 0.00 0.00 0.00 3.77
56 57 2.146342 CAGTGGAGCCTGTGTTAGTTG 58.854 52.381 0.00 0.00 0.00 3.16
57 58 1.543429 GCAGTGGAGCCTGTGTTAGTT 60.543 52.381 0.00 0.00 34.84 2.24
58 59 0.035458 GCAGTGGAGCCTGTGTTAGT 59.965 55.000 0.00 0.00 34.84 2.24
59 60 0.035317 TGCAGTGGAGCCTGTGTTAG 59.965 55.000 0.00 0.00 34.84 2.34
60 61 0.692476 ATGCAGTGGAGCCTGTGTTA 59.308 50.000 0.00 0.00 34.84 2.41
61 62 0.607489 GATGCAGTGGAGCCTGTGTT 60.607 55.000 0.00 0.00 34.84 3.32
62 63 1.002868 GATGCAGTGGAGCCTGTGT 60.003 57.895 0.00 0.00 34.84 3.72
63 64 0.607217 TTGATGCAGTGGAGCCTGTG 60.607 55.000 0.00 0.00 34.84 3.66
64 65 0.322277 CTTGATGCAGTGGAGCCTGT 60.322 55.000 0.00 0.00 34.84 4.00
65 66 0.035725 TCTTGATGCAGTGGAGCCTG 60.036 55.000 0.00 0.00 35.49 4.85
66 67 0.035630 GTCTTGATGCAGTGGAGCCT 60.036 55.000 0.00 0.00 0.00 4.58
67 68 1.364626 CGTCTTGATGCAGTGGAGCC 61.365 60.000 0.00 0.00 0.00 4.70
68 69 1.364626 CCGTCTTGATGCAGTGGAGC 61.365 60.000 0.00 0.00 0.00 4.70
69 70 0.742281 CCCGTCTTGATGCAGTGGAG 60.742 60.000 0.00 0.00 0.00 3.86
70 71 1.296392 CCCGTCTTGATGCAGTGGA 59.704 57.895 0.00 0.00 0.00 4.02
71 72 2.401766 GCCCGTCTTGATGCAGTGG 61.402 63.158 0.00 0.00 0.00 4.00
72 73 2.401766 GGCCCGTCTTGATGCAGTG 61.402 63.158 0.00 0.00 0.00 3.66
73 74 2.045926 GGCCCGTCTTGATGCAGT 60.046 61.111 0.00 0.00 0.00 4.40
74 75 1.243342 TTTGGCCCGTCTTGATGCAG 61.243 55.000 0.00 0.00 0.00 4.41
75 76 0.825425 TTTTGGCCCGTCTTGATGCA 60.825 50.000 0.00 0.00 0.00 3.96
76 77 0.388520 GTTTTGGCCCGTCTTGATGC 60.389 55.000 0.00 0.00 0.00 3.91
77 78 0.109781 CGTTTTGGCCCGTCTTGATG 60.110 55.000 0.00 0.00 0.00 3.07
78 79 0.536460 ACGTTTTGGCCCGTCTTGAT 60.536 50.000 0.00 0.00 30.05 2.57
79 80 1.153127 ACGTTTTGGCCCGTCTTGA 60.153 52.632 0.00 0.00 30.05 3.02
80 81 1.008995 CACGTTTTGGCCCGTCTTG 60.009 57.895 0.00 0.00 34.59 3.02
81 82 0.748729 TTCACGTTTTGGCCCGTCTT 60.749 50.000 0.00 0.00 34.59 3.01
82 83 0.748729 TTTCACGTTTTGGCCCGTCT 60.749 50.000 0.00 0.00 34.59 4.18
83 84 0.100861 TTTTCACGTTTTGGCCCGTC 59.899 50.000 0.00 0.00 34.59 4.79
84 85 0.179132 GTTTTCACGTTTTGGCCCGT 60.179 50.000 0.00 0.00 37.90 5.28
85 86 0.101579 AGTTTTCACGTTTTGGCCCG 59.898 50.000 0.00 0.00 0.00 6.13
86 87 1.930503 CAAGTTTTCACGTTTTGGCCC 59.069 47.619 0.00 0.00 0.00 5.80
87 88 1.930503 CCAAGTTTTCACGTTTTGGCC 59.069 47.619 0.00 0.00 32.72 5.36
88 89 2.601314 GACCAAGTTTTCACGTTTTGGC 59.399 45.455 1.71 0.00 41.50 4.52
89 90 2.849473 CGACCAAGTTTTCACGTTTTGG 59.151 45.455 0.00 0.31 43.02 3.28
90 91 3.749404 TCGACCAAGTTTTCACGTTTTG 58.251 40.909 0.00 0.00 0.00 2.44
91 92 4.625972 ATCGACCAAGTTTTCACGTTTT 57.374 36.364 0.00 0.00 0.00 2.43
92 93 5.504392 GTTATCGACCAAGTTTTCACGTTT 58.496 37.500 0.00 0.00 0.00 3.60
93 94 5.086888 GTTATCGACCAAGTTTTCACGTT 57.913 39.130 0.00 0.00 0.00 3.99
94 95 4.720530 GTTATCGACCAAGTTTTCACGT 57.279 40.909 0.00 0.00 0.00 4.49
107 108 4.693566 TCAAGGATGTGTTTGGTTATCGAC 59.306 41.667 0.00 0.00 0.00 4.20
108 109 4.900684 TCAAGGATGTGTTTGGTTATCGA 58.099 39.130 0.00 0.00 0.00 3.59
109 110 5.181245 ACTTCAAGGATGTGTTTGGTTATCG 59.819 40.000 0.00 0.00 0.00 2.92
110 111 6.575162 ACTTCAAGGATGTGTTTGGTTATC 57.425 37.500 0.00 0.00 0.00 1.75
111 112 6.976934 AACTTCAAGGATGTGTTTGGTTAT 57.023 33.333 0.00 0.00 0.00 1.89
112 113 6.783708 AAACTTCAAGGATGTGTTTGGTTA 57.216 33.333 0.00 0.00 35.11 2.85
113 114 5.675684 AAACTTCAAGGATGTGTTTGGTT 57.324 34.783 0.00 0.00 35.11 3.67
114 115 6.379988 ACTTAAACTTCAAGGATGTGTTTGGT 59.620 34.615 0.00 0.00 36.51 3.67
115 116 6.697019 CACTTAAACTTCAAGGATGTGTTTGG 59.303 38.462 0.00 0.00 36.51 3.28
116 117 7.257722 ACACTTAAACTTCAAGGATGTGTTTG 58.742 34.615 0.00 0.00 36.51 2.93
117 118 7.404671 ACACTTAAACTTCAAGGATGTGTTT 57.595 32.000 0.00 0.00 37.70 2.83
118 119 7.404671 AACACTTAAACTTCAAGGATGTGTT 57.595 32.000 11.64 11.64 40.02 3.32
119 120 7.257722 CAAACACTTAAACTTCAAGGATGTGT 58.742 34.615 0.00 0.00 37.67 3.72
120 121 6.198966 GCAAACACTTAAACTTCAAGGATGTG 59.801 38.462 0.00 0.00 0.00 3.21
121 122 6.127479 TGCAAACACTTAAACTTCAAGGATGT 60.127 34.615 0.00 0.00 0.00 3.06
122 123 6.272318 TGCAAACACTTAAACTTCAAGGATG 58.728 36.000 0.00 0.00 0.00 3.51
123 124 6.463995 TGCAAACACTTAAACTTCAAGGAT 57.536 33.333 0.00 0.00 0.00 3.24
124 125 5.906113 TGCAAACACTTAAACTTCAAGGA 57.094 34.783 0.00 0.00 0.00 3.36
125 126 5.463061 CCATGCAAACACTTAAACTTCAAGG 59.537 40.000 0.00 0.00 0.00 3.61
126 127 6.272318 TCCATGCAAACACTTAAACTTCAAG 58.728 36.000 0.00 0.00 0.00 3.02
127 128 6.127479 ACTCCATGCAAACACTTAAACTTCAA 60.127 34.615 0.00 0.00 0.00 2.69
128 129 5.359576 ACTCCATGCAAACACTTAAACTTCA 59.640 36.000 0.00 0.00 0.00 3.02
129 130 5.831997 ACTCCATGCAAACACTTAAACTTC 58.168 37.500 0.00 0.00 0.00 3.01
130 131 5.852282 ACTCCATGCAAACACTTAAACTT 57.148 34.783 0.00 0.00 0.00 2.66
131 132 5.359576 TCAACTCCATGCAAACACTTAAACT 59.640 36.000 0.00 0.00 0.00 2.66
132 133 5.458779 GTCAACTCCATGCAAACACTTAAAC 59.541 40.000 0.00 0.00 0.00 2.01
133 134 5.359576 AGTCAACTCCATGCAAACACTTAAA 59.640 36.000 0.00 0.00 0.00 1.52
134 135 4.887071 AGTCAACTCCATGCAAACACTTAA 59.113 37.500 0.00 0.00 0.00 1.85
135 136 4.460263 AGTCAACTCCATGCAAACACTTA 58.540 39.130 0.00 0.00 0.00 2.24
136 137 3.290710 AGTCAACTCCATGCAAACACTT 58.709 40.909 0.00 0.00 0.00 3.16
137 138 2.880890 GAGTCAACTCCATGCAAACACT 59.119 45.455 0.00 0.00 37.02 3.55
138 139 2.349817 CGAGTCAACTCCATGCAAACAC 60.350 50.000 4.63 0.00 39.79 3.32
139 140 1.872952 CGAGTCAACTCCATGCAAACA 59.127 47.619 4.63 0.00 39.79 2.83
140 141 1.400242 GCGAGTCAACTCCATGCAAAC 60.400 52.381 4.63 0.00 39.79 2.93
141 142 0.874390 GCGAGTCAACTCCATGCAAA 59.126 50.000 4.63 0.00 39.79 3.68
142 143 0.035317 AGCGAGTCAACTCCATGCAA 59.965 50.000 4.63 0.00 39.79 4.08
143 144 0.390340 GAGCGAGTCAACTCCATGCA 60.390 55.000 4.63 0.00 39.79 3.96
144 145 0.108424 AGAGCGAGTCAACTCCATGC 60.108 55.000 4.63 2.99 39.79 4.06
145 146 1.998315 CAAGAGCGAGTCAACTCCATG 59.002 52.381 4.63 3.78 39.79 3.66
146 147 1.674221 GCAAGAGCGAGTCAACTCCAT 60.674 52.381 4.63 0.00 39.79 3.41
147 148 0.319900 GCAAGAGCGAGTCAACTCCA 60.320 55.000 4.63 0.00 39.79 3.86
148 149 0.319900 TGCAAGAGCGAGTCAACTCC 60.320 55.000 4.63 0.00 46.23 3.85
149 150 0.787183 GTGCAAGAGCGAGTCAACTC 59.213 55.000 0.00 0.00 46.23 3.01
150 151 0.390860 AGTGCAAGAGCGAGTCAACT 59.609 50.000 0.00 0.00 46.23 3.16
151 152 0.510359 CAGTGCAAGAGCGAGTCAAC 59.490 55.000 0.00 0.00 46.23 3.18
152 153 0.389025 TCAGTGCAAGAGCGAGTCAA 59.611 50.000 0.00 0.00 46.23 3.18
153 154 0.319040 GTCAGTGCAAGAGCGAGTCA 60.319 55.000 0.00 0.00 46.23 3.41
154 155 0.319040 TGTCAGTGCAAGAGCGAGTC 60.319 55.000 0.00 0.00 46.23 3.36
155 156 0.598680 GTGTCAGTGCAAGAGCGAGT 60.599 55.000 0.00 0.00 46.23 4.18
156 157 0.598419 TGTGTCAGTGCAAGAGCGAG 60.598 55.000 0.00 0.00 46.23 5.03
157 158 0.033920 ATGTGTCAGTGCAAGAGCGA 59.966 50.000 0.00 0.00 46.23 4.93
158 159 0.441533 GATGTGTCAGTGCAAGAGCG 59.558 55.000 0.00 0.00 46.23 5.03
159 160 1.516161 TGATGTGTCAGTGCAAGAGC 58.484 50.000 0.00 0.00 42.57 4.09
160 161 3.869832 CCTATGATGTGTCAGTGCAAGAG 59.130 47.826 0.00 0.00 37.87 2.85
161 162 3.865446 CCTATGATGTGTCAGTGCAAGA 58.135 45.455 0.00 0.00 37.87 3.02
162 163 2.353889 GCCTATGATGTGTCAGTGCAAG 59.646 50.000 0.00 0.00 37.87 4.01
163 164 2.290197 TGCCTATGATGTGTCAGTGCAA 60.290 45.455 0.00 0.00 37.87 4.08
164 165 1.278699 TGCCTATGATGTGTCAGTGCA 59.721 47.619 0.00 0.00 37.87 4.57
165 166 2.028420 TGCCTATGATGTGTCAGTGC 57.972 50.000 0.00 0.00 37.87 4.40
166 167 5.337554 CAAATTGCCTATGATGTGTCAGTG 58.662 41.667 0.00 0.00 37.87 3.66
167 168 4.400251 CCAAATTGCCTATGATGTGTCAGT 59.600 41.667 0.00 0.00 37.87 3.41
168 169 4.202080 CCCAAATTGCCTATGATGTGTCAG 60.202 45.833 0.00 0.00 37.87 3.51
169 170 3.700539 CCCAAATTGCCTATGATGTGTCA 59.299 43.478 0.00 0.00 39.04 3.58
170 171 3.068590 CCCCAAATTGCCTATGATGTGTC 59.931 47.826 0.00 0.00 0.00 3.67
171 172 3.033184 CCCCAAATTGCCTATGATGTGT 58.967 45.455 0.00 0.00 0.00 3.72
172 173 3.033184 ACCCCAAATTGCCTATGATGTG 58.967 45.455 0.00 0.00 0.00 3.21
173 174 3.033184 CACCCCAAATTGCCTATGATGT 58.967 45.455 0.00 0.00 0.00 3.06
174 175 2.366266 CCACCCCAAATTGCCTATGATG 59.634 50.000 0.00 0.00 0.00 3.07
175 176 2.681422 CCACCCCAAATTGCCTATGAT 58.319 47.619 0.00 0.00 0.00 2.45
176 177 1.964344 GCCACCCCAAATTGCCTATGA 60.964 52.381 0.00 0.00 0.00 2.15
177 178 0.465287 GCCACCCCAAATTGCCTATG 59.535 55.000 0.00 0.00 0.00 2.23
178 179 1.042559 CGCCACCCCAAATTGCCTAT 61.043 55.000 0.00 0.00 0.00 2.57
179 180 1.680651 CGCCACCCCAAATTGCCTA 60.681 57.895 0.00 0.00 0.00 3.93
180 181 2.996734 CGCCACCCCAAATTGCCT 60.997 61.111 0.00 0.00 0.00 4.75
181 182 4.758251 GCGCCACCCCAAATTGCC 62.758 66.667 0.00 0.00 0.00 4.52
182 183 3.694538 AGCGCCACCCCAAATTGC 61.695 61.111 2.29 0.00 0.00 3.56
183 184 2.262292 CAGCGCCACCCCAAATTG 59.738 61.111 2.29 0.00 0.00 2.32
184 185 3.694538 GCAGCGCCACCCCAAATT 61.695 61.111 2.29 0.00 0.00 1.82
185 186 4.992740 TGCAGCGCCACCCCAAAT 62.993 61.111 2.29 0.00 0.00 2.32
191 192 4.712425 CTTGCTTGCAGCGCCACC 62.712 66.667 2.29 0.00 46.26 4.61
192 193 3.606065 CTCTTGCTTGCAGCGCCAC 62.606 63.158 2.29 0.00 46.26 5.01
193 194 3.359523 CTCTTGCTTGCAGCGCCA 61.360 61.111 2.29 0.00 46.26 5.69
194 195 2.524636 CTTCTCTTGCTTGCAGCGCC 62.525 60.000 2.29 0.00 46.26 6.53
195 196 1.154263 CTTCTCTTGCTTGCAGCGC 60.154 57.895 0.00 0.00 46.26 5.92
196 197 0.870393 TTCTTCTCTTGCTTGCAGCG 59.130 50.000 0.00 0.00 46.26 5.18
197 198 1.399471 CGTTCTTCTCTTGCTTGCAGC 60.399 52.381 0.00 1.70 42.82 5.25
198 199 2.138320 TCGTTCTTCTCTTGCTTGCAG 58.862 47.619 0.00 0.00 0.00 4.41
199 200 2.238942 TCGTTCTTCTCTTGCTTGCA 57.761 45.000 0.00 0.00 0.00 4.08
200 201 2.287915 TGTTCGTTCTTCTCTTGCTTGC 59.712 45.455 0.00 0.00 0.00 4.01
201 202 4.536364 TTGTTCGTTCTTCTCTTGCTTG 57.464 40.909 0.00 0.00 0.00 4.01
202 203 6.861065 TTATTGTTCGTTCTTCTCTTGCTT 57.139 33.333 0.00 0.00 0.00 3.91
203 204 6.564125 CGTTTATTGTTCGTTCTTCTCTTGCT 60.564 38.462 0.00 0.00 0.00 3.91
204 205 5.560378 CGTTTATTGTTCGTTCTTCTCTTGC 59.440 40.000 0.00 0.00 0.00 4.01
205 206 6.873656 TCGTTTATTGTTCGTTCTTCTCTTG 58.126 36.000 0.00 0.00 0.00 3.02
206 207 7.653767 ATCGTTTATTGTTCGTTCTTCTCTT 57.346 32.000 0.00 0.00 0.00 2.85
207 208 8.027771 AGTATCGTTTATTGTTCGTTCTTCTCT 58.972 33.333 0.00 0.00 0.00 3.10
208 209 8.170999 AGTATCGTTTATTGTTCGTTCTTCTC 57.829 34.615 0.00 0.00 0.00 2.87
209 210 9.798994 ATAGTATCGTTTATTGTTCGTTCTTCT 57.201 29.630 0.00 0.00 0.00 2.85
210 211 9.831054 CATAGTATCGTTTATTGTTCGTTCTTC 57.169 33.333 0.00 0.00 0.00 2.87
211 212 9.577110 TCATAGTATCGTTTATTGTTCGTTCTT 57.423 29.630 0.00 0.00 0.00 2.52
212 213 9.577110 TTCATAGTATCGTTTATTGTTCGTTCT 57.423 29.630 0.00 0.00 0.00 3.01
214 215 9.962759 GTTTCATAGTATCGTTTATTGTTCGTT 57.037 29.630 0.00 0.00 0.00 3.85
215 216 8.316046 CGTTTCATAGTATCGTTTATTGTTCGT 58.684 33.333 0.00 0.00 0.00 3.85
216 217 7.786118 CCGTTTCATAGTATCGTTTATTGTTCG 59.214 37.037 0.00 0.00 0.00 3.95
217 218 8.598075 ACCGTTTCATAGTATCGTTTATTGTTC 58.402 33.333 0.00 0.00 0.00 3.18
218 219 8.483307 ACCGTTTCATAGTATCGTTTATTGTT 57.517 30.769 0.00 0.00 0.00 2.83
219 220 8.483307 AACCGTTTCATAGTATCGTTTATTGT 57.517 30.769 0.00 0.00 0.00 2.71
220 221 9.417284 GAAACCGTTTCATAGTATCGTTTATTG 57.583 33.333 17.42 0.00 39.45 1.90
221 222 8.606602 GGAAACCGTTTCATAGTATCGTTTATT 58.393 33.333 22.39 0.00 41.43 1.40
222 223 7.765360 TGGAAACCGTTTCATAGTATCGTTTAT 59.235 33.333 22.39 0.00 41.43 1.40
223 224 7.095910 TGGAAACCGTTTCATAGTATCGTTTA 58.904 34.615 22.39 0.00 41.43 2.01
224 225 5.933463 TGGAAACCGTTTCATAGTATCGTTT 59.067 36.000 22.39 0.00 41.43 3.60
225 226 5.481105 TGGAAACCGTTTCATAGTATCGTT 58.519 37.500 22.39 0.00 41.43 3.85
226 227 5.075858 TGGAAACCGTTTCATAGTATCGT 57.924 39.130 22.39 0.00 41.43 3.73
227 228 5.006358 CCTTGGAAACCGTTTCATAGTATCG 59.994 44.000 22.39 5.65 41.43 2.92
228 229 5.296035 CCCTTGGAAACCGTTTCATAGTATC 59.704 44.000 22.39 6.75 41.43 2.24
229 230 5.190677 CCCTTGGAAACCGTTTCATAGTAT 58.809 41.667 22.39 0.00 41.43 2.12
230 231 4.041938 ACCCTTGGAAACCGTTTCATAGTA 59.958 41.667 22.39 3.92 41.43 1.82
231 232 3.181437 ACCCTTGGAAACCGTTTCATAGT 60.181 43.478 22.39 10.95 41.43 2.12
232 233 3.418047 ACCCTTGGAAACCGTTTCATAG 58.582 45.455 22.39 17.52 41.43 2.23
233 234 3.512219 ACCCTTGGAAACCGTTTCATA 57.488 42.857 22.39 10.32 41.43 2.15
234 235 2.375014 ACCCTTGGAAACCGTTTCAT 57.625 45.000 22.39 1.57 41.43 2.57
235 236 2.146920 AACCCTTGGAAACCGTTTCA 57.853 45.000 22.39 8.66 41.43 2.69
236 237 3.633525 AGTAAACCCTTGGAAACCGTTTC 59.366 43.478 14.58 14.58 38.94 2.78
237 238 3.634504 AGTAAACCCTTGGAAACCGTTT 58.365 40.909 0.00 0.00 0.00 3.60
238 239 3.301794 AGTAAACCCTTGGAAACCGTT 57.698 42.857 0.00 0.00 0.00 4.44
239 240 4.645863 ATAGTAAACCCTTGGAAACCGT 57.354 40.909 0.00 0.00 0.00 4.83
240 241 5.104817 TCCTATAGTAAACCCTTGGAAACCG 60.105 44.000 0.00 0.00 0.00 4.44
241 242 6.317663 TCCTATAGTAAACCCTTGGAAACC 57.682 41.667 0.00 0.00 0.00 3.27
242 243 8.818622 ATTTCCTATAGTAAACCCTTGGAAAC 57.181 34.615 0.00 0.00 42.59 2.78
243 244 9.250246 CAATTTCCTATAGTAAACCCTTGGAAA 57.750 33.333 0.00 0.00 43.49 3.13
244 245 8.616598 TCAATTTCCTATAGTAAACCCTTGGAA 58.383 33.333 0.00 0.00 0.00 3.53
245 246 8.165267 TCAATTTCCTATAGTAAACCCTTGGA 57.835 34.615 0.00 0.00 0.00 3.53
246 247 8.850156 CATCAATTTCCTATAGTAAACCCTTGG 58.150 37.037 0.00 0.00 0.00 3.61
247 248 9.408648 ACATCAATTTCCTATAGTAAACCCTTG 57.591 33.333 0.00 0.00 0.00 3.61
248 249 9.628500 GACATCAATTTCCTATAGTAAACCCTT 57.372 33.333 0.00 0.00 0.00 3.95
249 250 8.778059 TGACATCAATTTCCTATAGTAAACCCT 58.222 33.333 0.00 0.00 0.00 4.34
250 251 8.974060 TGACATCAATTTCCTATAGTAAACCC 57.026 34.615 0.00 0.00 0.00 4.11
252 253 9.916397 CGTTGACATCAATTTCCTATAGTAAAC 57.084 33.333 0.00 0.00 38.24 2.01
253 254 9.878667 TCGTTGACATCAATTTCCTATAGTAAA 57.121 29.630 0.00 0.00 38.24 2.01
259 260 8.993121 GTCATATCGTTGACATCAATTTCCTAT 58.007 33.333 0.00 0.00 44.38 2.57
260 261 8.365399 GTCATATCGTTGACATCAATTTCCTA 57.635 34.615 0.00 0.00 44.38 2.94
261 262 7.251704 GTCATATCGTTGACATCAATTTCCT 57.748 36.000 0.00 0.00 44.38 3.36
272 273 3.722147 AGAGGCATGTCATATCGTTGAC 58.278 45.455 0.00 8.34 45.05 3.18
273 274 4.406648 AAGAGGCATGTCATATCGTTGA 57.593 40.909 0.00 0.00 0.00 3.18
274 275 5.268544 CAAAAGAGGCATGTCATATCGTTG 58.731 41.667 0.00 0.00 0.00 4.10
275 276 4.336433 CCAAAAGAGGCATGTCATATCGTT 59.664 41.667 0.00 0.00 0.00 3.85
276 277 3.879295 CCAAAAGAGGCATGTCATATCGT 59.121 43.478 0.00 0.00 0.00 3.73
277 278 3.251729 CCCAAAAGAGGCATGTCATATCG 59.748 47.826 0.00 0.00 0.00 2.92
278 279 4.843220 CCCAAAAGAGGCATGTCATATC 57.157 45.455 0.00 0.00 0.00 1.63
289 290 0.940126 CGATCATCGCCCAAAAGAGG 59.060 55.000 0.00 0.00 31.14 3.69
290 291 0.940126 CCGATCATCGCCCAAAAGAG 59.060 55.000 0.00 0.00 38.82 2.85
291 292 0.251916 ACCGATCATCGCCCAAAAGA 59.748 50.000 0.00 0.00 38.82 2.52
292 293 0.378257 CACCGATCATCGCCCAAAAG 59.622 55.000 0.00 0.00 38.82 2.27
293 294 1.029408 CCACCGATCATCGCCCAAAA 61.029 55.000 0.00 0.00 38.82 2.44
294 295 1.451207 CCACCGATCATCGCCCAAA 60.451 57.895 0.00 0.00 38.82 3.28
295 296 2.189257 CCACCGATCATCGCCCAA 59.811 61.111 0.00 0.00 38.82 4.12
296 297 4.545706 GCCACCGATCATCGCCCA 62.546 66.667 0.00 0.00 38.82 5.36
297 298 4.241555 AGCCACCGATCATCGCCC 62.242 66.667 0.00 0.00 38.82 6.13
298 299 2.663188 GAGCCACCGATCATCGCC 60.663 66.667 0.00 0.00 38.82 5.54
299 300 2.663188 GGAGCCACCGATCATCGC 60.663 66.667 0.00 0.00 38.82 4.58
313 314 0.469917 ATATGTTGGTGGCTCCGGAG 59.530 55.000 27.83 27.83 39.52 4.63
314 315 0.468226 GATATGTTGGTGGCTCCGGA 59.532 55.000 2.93 2.93 39.52 5.14
315 316 0.180171 TGATATGTTGGTGGCTCCGG 59.820 55.000 0.00 0.00 39.52 5.14
316 317 1.299541 GTGATATGTTGGTGGCTCCG 58.700 55.000 0.53 0.00 39.52 4.63
317 318 2.418368 TGTGATATGTTGGTGGCTCC 57.582 50.000 0.00 0.00 0.00 4.70
318 319 2.423538 GGTTGTGATATGTTGGTGGCTC 59.576 50.000 0.00 0.00 0.00 4.70
319 320 2.224992 TGGTTGTGATATGTTGGTGGCT 60.225 45.455 0.00 0.00 0.00 4.75
320 321 2.166829 TGGTTGTGATATGTTGGTGGC 58.833 47.619 0.00 0.00 0.00 5.01
321 322 4.862902 TTTGGTTGTGATATGTTGGTGG 57.137 40.909 0.00 0.00 0.00 4.61
322 323 6.705381 ACATTTTTGGTTGTGATATGTTGGTG 59.295 34.615 0.00 0.00 0.00 4.17
323 324 6.825610 ACATTTTTGGTTGTGATATGTTGGT 58.174 32.000 0.00 0.00 0.00 3.67
324 325 8.707839 GTTACATTTTTGGTTGTGATATGTTGG 58.292 33.333 0.00 0.00 0.00 3.77
325 326 9.474920 AGTTACATTTTTGGTTGTGATATGTTG 57.525 29.630 0.00 0.00 0.00 3.33
326 327 9.474920 CAGTTACATTTTTGGTTGTGATATGTT 57.525 29.630 0.00 0.00 0.00 2.71
327 328 8.855110 TCAGTTACATTTTTGGTTGTGATATGT 58.145 29.630 0.00 0.00 0.00 2.29
328 329 9.345517 CTCAGTTACATTTTTGGTTGTGATATG 57.654 33.333 0.00 0.00 0.00 1.78
329 330 9.295825 TCTCAGTTACATTTTTGGTTGTGATAT 57.704 29.630 0.00 0.00 0.00 1.63
330 331 8.684386 TCTCAGTTACATTTTTGGTTGTGATA 57.316 30.769 0.00 0.00 0.00 2.15
331 332 7.581213 TCTCAGTTACATTTTTGGTTGTGAT 57.419 32.000 0.00 0.00 0.00 3.06
332 333 7.581213 ATCTCAGTTACATTTTTGGTTGTGA 57.419 32.000 0.00 0.00 0.00 3.58
333 334 9.345517 CATATCTCAGTTACATTTTTGGTTGTG 57.654 33.333 0.00 0.00 0.00 3.33
334 335 8.522830 CCATATCTCAGTTACATTTTTGGTTGT 58.477 33.333 0.00 0.00 0.00 3.32
335 336 7.975616 CCCATATCTCAGTTACATTTTTGGTTG 59.024 37.037 0.00 0.00 0.00 3.77
336 337 7.673926 ACCCATATCTCAGTTACATTTTTGGTT 59.326 33.333 0.00 0.00 0.00 3.67
337 338 7.182060 ACCCATATCTCAGTTACATTTTTGGT 58.818 34.615 0.00 0.00 0.00 3.67
338 339 7.339212 TGACCCATATCTCAGTTACATTTTTGG 59.661 37.037 0.00 0.00 0.00 3.28
339 340 8.184192 GTGACCCATATCTCAGTTACATTTTTG 58.816 37.037 0.00 0.00 0.00 2.44
340 341 7.888021 TGTGACCCATATCTCAGTTACATTTTT 59.112 33.333 0.00 0.00 0.00 1.94
341 342 7.402054 TGTGACCCATATCTCAGTTACATTTT 58.598 34.615 0.00 0.00 0.00 1.82
342 343 6.957631 TGTGACCCATATCTCAGTTACATTT 58.042 36.000 0.00 0.00 0.00 2.32
343 344 6.560003 TGTGACCCATATCTCAGTTACATT 57.440 37.500 0.00 0.00 0.00 2.71
344 345 6.156949 ACTTGTGACCCATATCTCAGTTACAT 59.843 38.462 0.00 0.00 30.15 2.29
345 346 5.483937 ACTTGTGACCCATATCTCAGTTACA 59.516 40.000 0.00 0.00 0.00 2.41
346 347 5.812642 CACTTGTGACCCATATCTCAGTTAC 59.187 44.000 0.00 0.00 0.00 2.50
347 348 5.483937 ACACTTGTGACCCATATCTCAGTTA 59.516 40.000 7.83 0.00 0.00 2.24
348 349 4.287067 ACACTTGTGACCCATATCTCAGTT 59.713 41.667 7.83 0.00 0.00 3.16
349 350 3.840666 ACACTTGTGACCCATATCTCAGT 59.159 43.478 7.83 0.00 0.00 3.41
350 351 4.478206 ACACTTGTGACCCATATCTCAG 57.522 45.455 7.83 0.00 0.00 3.35
351 352 4.908601 AACACTTGTGACCCATATCTCA 57.091 40.909 7.83 0.00 0.00 3.27
352 353 5.491982 AGAAACACTTGTGACCCATATCTC 58.508 41.667 7.83 0.00 0.00 2.75
353 354 5.505181 AGAAACACTTGTGACCCATATCT 57.495 39.130 7.83 0.00 0.00 1.98
354 355 6.575162 AAAGAAACACTTGTGACCCATATC 57.425 37.500 7.83 0.00 38.98 1.63
355 356 6.015434 GGAAAAGAAACACTTGTGACCCATAT 60.015 38.462 7.83 0.00 38.98 1.78
356 357 5.300792 GGAAAAGAAACACTTGTGACCCATA 59.699 40.000 7.83 0.00 38.98 2.74
357 358 4.099419 GGAAAAGAAACACTTGTGACCCAT 59.901 41.667 7.83 0.00 38.98 4.00
358 359 3.445805 GGAAAAGAAACACTTGTGACCCA 59.554 43.478 7.83 0.00 38.98 4.51
359 360 3.699538 AGGAAAAGAAACACTTGTGACCC 59.300 43.478 7.83 0.00 38.98 4.46
360 361 4.202020 GGAGGAAAAGAAACACTTGTGACC 60.202 45.833 7.83 0.00 38.98 4.02
361 362 4.398044 TGGAGGAAAAGAAACACTTGTGAC 59.602 41.667 7.83 0.00 38.98 3.67
362 363 4.594970 TGGAGGAAAAGAAACACTTGTGA 58.405 39.130 7.83 0.00 38.98 3.58
363 364 4.640201 TCTGGAGGAAAAGAAACACTTGTG 59.360 41.667 0.00 0.00 38.98 3.33
364 365 4.640647 GTCTGGAGGAAAAGAAACACTTGT 59.359 41.667 0.00 0.00 38.98 3.16
365 366 4.260784 CGTCTGGAGGAAAAGAAACACTTG 60.261 45.833 0.00 0.00 38.98 3.16
366 367 3.877508 CGTCTGGAGGAAAAGAAACACTT 59.122 43.478 0.00 0.00 40.98 3.16
367 368 3.134081 TCGTCTGGAGGAAAAGAAACACT 59.866 43.478 0.00 0.00 0.00 3.55
368 369 3.463944 TCGTCTGGAGGAAAAGAAACAC 58.536 45.455 0.00 0.00 0.00 3.32
369 370 3.728845 CTCGTCTGGAGGAAAAGAAACA 58.271 45.455 0.00 0.00 39.22 2.83
384 385 4.779966 TCTCTCGCGCCCTCGTCT 62.780 66.667 0.00 0.00 38.14 4.18
411 412 1.176619 GGCCTACGCACCCACTTTTT 61.177 55.000 0.00 0.00 36.38 1.94
412 413 1.602605 GGCCTACGCACCCACTTTT 60.603 57.895 0.00 0.00 36.38 2.27
423 424 1.299620 CGTAATCCGGTGGCCTACG 60.300 63.158 3.32 8.64 30.94 3.51
426 427 1.746517 GATCGTAATCCGGTGGCCT 59.253 57.895 3.32 0.00 37.11 5.19
443 444 2.849964 CGGCTGCTGAGCTATCGGA 61.850 63.158 5.83 0.00 45.44 4.55
448 449 4.152964 CTGGCGGCTGCTGAGCTA 62.153 66.667 18.85 6.90 45.44 3.32
480 481 6.173339 TGGTTTCCTAAAGAGCATGAGTAAG 58.827 40.000 0.00 0.00 0.00 2.34
484 485 4.836825 TCTGGTTTCCTAAAGAGCATGAG 58.163 43.478 0.00 0.00 0.00 2.90
487 488 5.441718 TCATCTGGTTTCCTAAAGAGCAT 57.558 39.130 0.00 0.00 0.00 3.79
494 495 7.776030 TGTTACTGTTTTCATCTGGTTTCCTAA 59.224 33.333 0.00 0.00 0.00 2.69
497 498 6.385649 TGTTACTGTTTTCATCTGGTTTCC 57.614 37.500 0.00 0.00 0.00 3.13
504 505 5.536161 AGGCATGTTGTTACTGTTTTCATCT 59.464 36.000 0.00 0.00 0.00 2.90
506 507 5.536161 AGAGGCATGTTGTTACTGTTTTCAT 59.464 36.000 0.00 0.00 0.00 2.57
510 511 5.852282 AAAGAGGCATGTTGTTACTGTTT 57.148 34.783 0.00 0.00 0.00 2.83
512 513 6.204882 GTCTAAAAGAGGCATGTTGTTACTGT 59.795 38.462 0.00 0.00 0.00 3.55
513 514 6.603095 GTCTAAAAGAGGCATGTTGTTACTG 58.397 40.000 0.00 0.00 0.00 2.74
514 515 5.408604 CGTCTAAAAGAGGCATGTTGTTACT 59.591 40.000 0.00 0.00 0.00 2.24
515 516 5.407387 TCGTCTAAAAGAGGCATGTTGTTAC 59.593 40.000 0.00 0.00 30.68 2.50
516 517 5.543714 TCGTCTAAAAGAGGCATGTTGTTA 58.456 37.500 0.00 0.00 30.68 2.41
517 518 4.385825 TCGTCTAAAAGAGGCATGTTGTT 58.614 39.130 0.00 0.00 30.68 2.83
518 519 4.002906 TCGTCTAAAAGAGGCATGTTGT 57.997 40.909 0.00 0.00 30.68 3.32
519 520 4.728882 GCATCGTCTAAAAGAGGCATGTTG 60.729 45.833 0.00 0.00 42.83 3.33
520 521 3.375299 GCATCGTCTAAAAGAGGCATGTT 59.625 43.478 0.00 0.00 42.83 2.71
551 552 2.279517 GTATGTCAGCGGCTCGGG 60.280 66.667 0.00 0.00 0.00 5.14
557 558 2.426522 CCCATTATGGTATGTCAGCGG 58.573 52.381 10.65 0.00 35.17 5.52
561 562 5.661503 ACATTCCCCATTATGGTATGTCA 57.338 39.130 10.65 0.00 35.17 3.58
574 575 0.533491 CGTCTCCGTTACATTCCCCA 59.467 55.000 0.00 0.00 0.00 4.96
581 582 3.332493 GAGCCGCGTCTCCGTTACA 62.332 63.158 5.72 0.00 36.15 2.41
597 598 0.179189 GGGAAAGAAATGCGTGCGAG 60.179 55.000 0.00 0.00 0.00 5.03
603 604 1.376609 CGGGAGGGGAAAGAAATGCG 61.377 60.000 0.00 0.00 0.00 4.73
625 626 4.918201 CATTCCCCGCGCCTCCTC 62.918 72.222 0.00 0.00 0.00 3.71
644 645 4.719369 GCGAGCCGTGTCTCCGTT 62.719 66.667 0.00 0.00 0.00 4.44
652 653 3.911155 GAAACGCTTGCGAGCCGTG 62.911 63.158 20.46 9.00 46.42 4.94
654 655 2.443957 AAAGAAACGCTTGCGAGCCG 62.444 55.000 20.46 16.72 46.42 5.52
657 658 0.110192 GGGAAAGAAACGCTTGCGAG 60.110 55.000 22.03 0.00 36.80 5.03
684 685 2.434884 ATTGCACACGCCTCCTCG 60.435 61.111 0.00 0.00 37.32 4.63
685 686 1.078848 AGATTGCACACGCCTCCTC 60.079 57.895 0.00 0.00 37.32 3.71
686 687 1.078848 GAGATTGCACACGCCTCCT 60.079 57.895 0.00 0.00 37.32 3.69
688 689 1.446099 TCGAGATTGCACACGCCTC 60.446 57.895 0.00 0.00 37.32 4.70
690 691 1.959899 CTGTCGAGATTGCACACGCC 61.960 60.000 0.00 0.00 37.32 5.68
691 692 1.417592 CTGTCGAGATTGCACACGC 59.582 57.895 0.00 0.00 39.24 5.34
692 693 0.388520 TCCTGTCGAGATTGCACACG 60.389 55.000 0.00 0.00 0.00 4.49
693 694 1.728971 CTTCCTGTCGAGATTGCACAC 59.271 52.381 0.00 0.00 0.00 3.82
694 695 1.344438 ACTTCCTGTCGAGATTGCACA 59.656 47.619 0.00 0.00 0.00 4.57
696 697 1.338105 CCACTTCCTGTCGAGATTGCA 60.338 52.381 0.00 0.00 0.00 4.08
697 698 1.363744 CCACTTCCTGTCGAGATTGC 58.636 55.000 0.00 0.00 0.00 3.56
698 699 1.406069 CCCCACTTCCTGTCGAGATTG 60.406 57.143 0.00 0.00 0.00 2.67
699 700 0.905357 CCCCACTTCCTGTCGAGATT 59.095 55.000 0.00 0.00 0.00 2.40
734 735 4.630785 ATGAGCCGTCGGATCGCG 62.631 66.667 23.46 0.00 41.58 5.87
752 753 2.830370 GCATTGAGGGGAAGCCCG 60.830 66.667 0.00 0.00 46.66 6.13
765 766 1.745489 GGCCTCGAAACGGAGCATT 60.745 57.895 0.00 0.00 32.57 3.56
772 773 2.158959 CGCTAGTGGCCTCGAAACG 61.159 63.158 3.32 1.06 37.74 3.60
777 778 0.669318 TTTGAACGCTAGTGGCCTCG 60.669 55.000 3.32 2.25 37.74 4.63
778 779 0.796927 GTTTGAACGCTAGTGGCCTC 59.203 55.000 3.32 0.00 37.74 4.70
781 782 1.235724 AAGGTTTGAACGCTAGTGGC 58.764 50.000 8.42 0.00 37.64 5.01
782 783 3.550030 CCAAAAGGTTTGAACGCTAGTGG 60.550 47.826 8.42 0.00 0.00 4.00
783 784 3.628017 CCAAAAGGTTTGAACGCTAGTG 58.372 45.455 0.59 0.59 0.00 2.74
784 785 2.034179 GCCAAAAGGTTTGAACGCTAGT 59.966 45.455 2.30 0.00 0.00 2.57
786 787 1.002251 CGCCAAAAGGTTTGAACGCTA 60.002 47.619 2.30 0.00 0.00 4.26
787 788 0.248866 CGCCAAAAGGTTTGAACGCT 60.249 50.000 2.30 0.00 0.00 5.07
788 789 0.526739 ACGCCAAAAGGTTTGAACGC 60.527 50.000 12.79 4.16 0.00 4.84
789 790 1.196200 CACGCCAAAAGGTTTGAACG 58.804 50.000 2.30 8.05 0.00 3.95
791 792 0.532573 TGCACGCCAAAAGGTTTGAA 59.467 45.000 2.30 0.00 0.00 2.69
792 793 0.179124 GTGCACGCCAAAAGGTTTGA 60.179 50.000 0.00 0.00 0.00 2.69
793 794 0.459237 TGTGCACGCCAAAAGGTTTG 60.459 50.000 13.13 0.00 0.00 2.93
794 795 0.459411 GTGTGCACGCCAAAAGGTTT 60.459 50.000 19.81 0.00 0.00 3.27
795 796 1.140804 GTGTGCACGCCAAAAGGTT 59.859 52.632 19.81 0.00 0.00 3.50
796 797 2.049185 TGTGTGCACGCCAAAAGGT 61.049 52.632 26.63 0.00 0.00 3.50
797 798 1.588667 GTGTGTGCACGCCAAAAGG 60.589 57.895 26.63 0.00 35.75 3.11
816 820 4.722700 ATGGGTCACGTGCTGCCC 62.723 66.667 25.69 25.69 36.97 5.36
818 822 3.490759 CGATGGGTCACGTGCTGC 61.491 66.667 11.67 3.29 0.00 5.25
819 823 2.815211 CCGATGGGTCACGTGCTG 60.815 66.667 11.67 0.00 0.00 4.41
842 870 0.163146 CTCTCCGTTTCGCCGTTTTC 59.837 55.000 0.00 0.00 0.00 2.29
851 879 3.485546 CGAGTACTAGTGCTCTCCGTTTC 60.486 52.174 30.40 10.09 39.68 2.78
852 880 2.419324 CGAGTACTAGTGCTCTCCGTTT 59.581 50.000 30.40 2.44 39.68 3.60
857 885 3.426426 CCAACACGAGTACTAGTGCTCTC 60.426 52.174 30.40 20.66 39.68 3.20
858 886 2.488545 CCAACACGAGTACTAGTGCTCT 59.511 50.000 30.40 18.66 39.68 4.09
859 887 2.486982 TCCAACACGAGTACTAGTGCTC 59.513 50.000 29.24 26.02 39.36 4.26
860 888 2.511659 TCCAACACGAGTACTAGTGCT 58.488 47.619 29.24 18.73 39.36 4.40
861 889 3.293311 TTCCAACACGAGTACTAGTGC 57.707 47.619 29.24 3.75 39.36 4.40
862 890 4.613944 TGTTTCCAACACGAGTACTAGTG 58.386 43.478 28.14 28.14 41.13 2.74
863 891 4.924305 TGTTTCCAACACGAGTACTAGT 57.076 40.909 2.38 2.38 36.25 2.57
877 905 0.671251 GGCGTTGGATTGTGTTTCCA 59.329 50.000 0.00 0.00 41.50 3.53
878 906 0.386731 CGGCGTTGGATTGTGTTTCC 60.387 55.000 0.00 0.00 0.00 3.13
879 907 1.001745 GCGGCGTTGGATTGTGTTTC 61.002 55.000 9.37 0.00 0.00 2.78
880 908 1.007849 GCGGCGTTGGATTGTGTTT 60.008 52.632 9.37 0.00 0.00 2.83
891 919 0.466543 TTGGATATAGTGGCGGCGTT 59.533 50.000 9.37 0.00 0.00 4.84
932 980 4.235762 CGGCGGATCGATTGGGGT 62.236 66.667 0.00 0.00 0.00 4.95
964 1012 1.535896 TCGATCGATTCCGCTTCTAGG 59.464 52.381 15.15 0.00 35.37 3.02
985 1033 2.264480 CATTGCTCGGTCGGTGGA 59.736 61.111 0.00 0.00 0.00 4.02
987 1035 3.499737 GGCATTGCTCGGTCGGTG 61.500 66.667 8.82 0.00 0.00 4.94
1444 1510 2.829458 GGAGGAGGAGACGACCCG 60.829 72.222 0.00 0.00 33.34 5.28
1740 1808 1.079543 GATCGATCGGCCCATGGAG 60.080 63.158 15.22 4.39 0.00 3.86
1779 1848 6.981722 TGAAAGGAAAAGAAATTCTAGGCAC 58.018 36.000 0.00 0.00 0.00 5.01
1788 1857 8.043113 AGCAAAAGAACTGAAAGGAAAAGAAAT 58.957 29.630 0.00 0.00 39.30 2.17
1792 1861 5.456822 CGAGCAAAAGAACTGAAAGGAAAAG 59.543 40.000 0.00 0.00 39.30 2.27
1793 1862 5.105917 ACGAGCAAAAGAACTGAAAGGAAAA 60.106 36.000 0.00 0.00 39.30 2.29
1798 1867 4.802876 AGACGAGCAAAAGAACTGAAAG 57.197 40.909 0.00 0.00 42.29 2.62
1875 1945 6.818644 TGTGCTGATCAACTAAGATTAACTCC 59.181 38.462 0.00 0.00 0.00 3.85
1924 1995 7.602644 TCAAAACTGGACTGATCAACATACTAC 59.397 37.037 0.00 0.00 0.00 2.73
1925 1996 7.676004 TCAAAACTGGACTGATCAACATACTA 58.324 34.615 0.00 0.00 0.00 1.82
1926 1997 6.533730 TCAAAACTGGACTGATCAACATACT 58.466 36.000 0.00 0.00 0.00 2.12
1957 2028 2.141517 GCAGGATCATCATTCACCTCG 58.858 52.381 0.00 0.00 0.00 4.63
1979 2853 8.421784 AGCTTTCAACCGAGAAGATTGTATATA 58.578 33.333 0.00 0.00 0.00 0.86
1980 2854 7.275920 AGCTTTCAACCGAGAAGATTGTATAT 58.724 34.615 0.00 0.00 0.00 0.86
2017 2891 5.105392 TGTTTGAACAAATTCCTGAAGCTGT 60.105 36.000 3.34 0.00 35.67 4.40
2019 2893 5.596836 TGTTTGAACAAATTCCTGAAGCT 57.403 34.783 3.34 0.00 35.67 3.74
2037 2911 2.104622 CAGGAAACAGGGGCAATTGTTT 59.895 45.455 7.40 11.38 46.83 2.83
2048 2941 4.193826 TCGAGAAGATTCAGGAAACAGG 57.806 45.455 0.00 0.00 0.00 4.00
2161 3081 1.757682 GATTACGCCCCATGACCAAA 58.242 50.000 0.00 0.00 0.00 3.28
2183 3103 6.917533 AGTGATGAAAATTCGAAAAGCAGAT 58.082 32.000 0.00 0.00 0.00 2.90
2261 3182 4.326826 CCAGTATTTCTGCCACTCAAGAA 58.673 43.478 0.00 0.00 42.38 2.52
2273 3194 6.670695 ATTCAAAACTTGGCCAGTATTTCT 57.329 33.333 5.11 0.00 32.94 2.52
2274 3195 6.531594 GCTATTCAAAACTTGGCCAGTATTTC 59.468 38.462 5.11 0.00 32.94 2.17
2297 3218 5.417894 ACACATCTGAAAACATGATCATGCT 59.582 36.000 31.17 19.67 42.39 3.79
2311 3232 8.628280 TGTTTGATTTGTATTGACACATCTGAA 58.372 29.630 5.96 0.21 41.46 3.02
2319 3240 8.939201 ACAATTGTGTTTGATTTGTATTGACA 57.061 26.923 11.07 0.00 32.58 3.58
2320 3241 9.029243 TGACAATTGTGTTTGATTTGTATTGAC 57.971 29.630 17.58 0.00 38.41 3.18
2330 3251 7.980662 TGAATCTTTGTGACAATTGTGTTTGAT 59.019 29.630 17.58 8.83 38.41 2.57
2410 3335 4.609947 TGTGTCATCTTTCATGTTTGCAC 58.390 39.130 0.00 0.00 0.00 4.57
2424 3349 3.182967 GTCGGACTCTGAATGTGTCATC 58.817 50.000 0.00 0.00 40.00 2.92
2439 3367 1.798813 ACGCTCAGATTTTTGTCGGAC 59.201 47.619 0.00 0.00 0.00 4.79
2445 3373 0.385849 TGCGCACGCTCAGATTTTTG 60.386 50.000 16.77 0.00 42.51 2.44
2459 3387 0.461870 AACTGAACAGAGTGTGCGCA 60.462 50.000 5.66 5.66 0.00 6.09
2470 3398 6.847400 TGAACAAAAGAATCGAAACTGAACA 58.153 32.000 0.00 0.00 0.00 3.18
2509 3437 3.669023 GCCAGAGATCAAAACTGAAAGCG 60.669 47.826 0.00 0.00 37.60 4.68
2528 3456 2.636647 TTGGATAAGCATGATCGCCA 57.363 45.000 0.00 0.00 0.00 5.69
2536 3465 3.758755 TCGAGCAGATTGGATAAGCAT 57.241 42.857 0.00 0.00 0.00 3.79
2582 3511 9.142014 CCCCATAACCAAAATGACATTCTTATA 57.858 33.333 0.05 0.00 0.00 0.98
2583 3512 7.623278 ACCCCATAACCAAAATGACATTCTTAT 59.377 33.333 0.05 0.00 0.00 1.73
2627 3556 2.842457 TCATGAGATCCTGCAATTCGG 58.158 47.619 0.00 0.00 0.00 4.30
2628 3557 4.377124 CGATTCATGAGATCCTGCAATTCG 60.377 45.833 0.00 0.00 0.00 3.34
2637 3566 9.868277 AGAATAAATACTCGATTCATGAGATCC 57.132 33.333 0.00 0.00 36.93 3.36
2641 3570 8.706936 CCACAGAATAAATACTCGATTCATGAG 58.293 37.037 0.00 0.00 39.40 2.90
2642 3571 8.204160 ACCACAGAATAAATACTCGATTCATGA 58.796 33.333 0.00 0.00 32.96 3.07
2649 3578 9.128404 ACTATACACCACAGAATAAATACTCGA 57.872 33.333 0.00 0.00 0.00 4.04
2650 3579 9.745880 AACTATACACCACAGAATAAATACTCG 57.254 33.333 0.00 0.00 0.00 4.18
2660 3589 7.924412 GGAATCGAATAACTATACACCACAGAA 59.076 37.037 0.00 0.00 0.00 3.02
2661 3590 7.431249 GGAATCGAATAACTATACACCACAGA 58.569 38.462 0.00 0.00 0.00 3.41
2663 3592 6.325545 AGGGAATCGAATAACTATACACCACA 59.674 38.462 0.00 0.00 0.00 4.17
2666 3595 9.420551 CTAAAGGGAATCGAATAACTATACACC 57.579 37.037 0.00 0.00 0.00 4.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.