Multiple sequence alignment - TraesCS5B01G544500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G544500 chr5B 100.000 4915 0 0 1310 6224 697114226 697119140 0.000000e+00 9077.0
1 TraesCS5B01G544500 chr5B 100.000 1021 0 0 1 1021 697112917 697113937 0.000000e+00 1886.0
2 TraesCS5B01G544500 chr5B 82.215 596 74 12 1598 2171 3366944 3367529 9.380000e-133 484.0
3 TraesCS5B01G544500 chr5B 93.962 265 13 2 5963 6224 551463018 551463282 1.260000e-106 398.0
4 TraesCS5B01G544500 chr5B 88.235 187 16 3 2227 2411 3367528 3367710 1.050000e-52 219.0
5 TraesCS5B01G544500 chr5B 91.946 149 11 1 5003 5150 697296730 697296878 2.270000e-49 207.0
6 TraesCS5B01G544500 chr5B 87.050 139 15 3 3500 3638 525451737 525451602 3.000000e-33 154.0
7 TraesCS5B01G544500 chr5B 86.325 117 6 7 1 109 697063331 697063445 1.100000e-22 119.0
8 TraesCS5B01G544500 chr5B 83.478 115 16 3 3640 3752 68702147 68702260 3.070000e-18 104.0
9 TraesCS5B01G544500 chr5B 76.101 159 22 8 3496 3638 96878911 96879069 1.120000e-07 69.4
10 TraesCS5B01G544500 chr5D 91.071 2184 121 33 1381 3523 553681689 553679539 0.000000e+00 2885.0
11 TraesCS5B01G544500 chr5D 92.812 1725 80 18 3998 5704 553679215 553677517 0.000000e+00 2459.0
12 TraesCS5B01G544500 chr5D 94.981 259 8 2 3749 4003 553679534 553679277 9.720000e-108 401.0
13 TraesCS5B01G544500 chr5D 92.748 262 10 3 767 1021 553682368 553682109 2.740000e-98 370.0
14 TraesCS5B01G544500 chr5D 93.213 221 14 1 5003 5222 553658660 553658440 2.160000e-84 324.0
15 TraesCS5B01G544500 chr5D 76.786 168 22 9 3492 3646 231736752 231736915 1.860000e-10 78.7
16 TraesCS5B01G544500 chr4A 89.731 2269 136 31 1310 3523 614867455 614869681 0.000000e+00 2809.0
17 TraesCS5B01G544500 chr4A 94.122 1327 45 16 3998 5302 614870001 614871316 0.000000e+00 1988.0
18 TraesCS5B01G544500 chr4A 86.515 749 63 23 1 739 614866383 614867103 0.000000e+00 789.0
19 TraesCS5B01G544500 chr4A 96.825 252 8 0 3749 4000 614869686 614869937 7.460000e-114 422.0
20 TraesCS5B01G544500 chr4A 94.297 263 7 4 760 1021 614867161 614867416 4.520000e-106 396.0
21 TraesCS5B01G544500 chr4A 84.722 216 17 7 4792 4998 614874966 614875174 1.060000e-47 202.0
22 TraesCS5B01G544500 chr4A 91.964 112 8 1 3641 3751 614024410 614024521 8.350000e-34 156.0
23 TraesCS5B01G544500 chr2B 84.780 841 87 15 1598 2411 151481660 151480834 0.000000e+00 806.0
24 TraesCS5B01G544500 chr2B 95.437 263 11 1 5963 6224 138529305 138529567 9.650000e-113 418.0
25 TraesCS5B01G544500 chr2B 81.319 546 72 13 2864 3408 429140715 429141231 3.470000e-112 416.0
26 TraesCS5B01G544500 chr2B 80.000 570 82 22 2843 3408 91804812 91805353 5.850000e-105 392.0
27 TraesCS5B01G544500 chr2B 91.111 135 11 1 3521 3654 484592170 484592304 1.380000e-41 182.0
28 TraesCS5B01G544500 chr2B 87.912 91 11 0 1516 1606 62410647 62410737 2.370000e-19 108.0
29 TraesCS5B01G544500 chr2B 83.036 112 19 0 3643 3754 742063994 742063883 1.100000e-17 102.0
30 TraesCS5B01G544500 chr6B 84.643 840 94 13 1598 2411 260708182 260709012 0.000000e+00 804.0
31 TraesCS5B01G544500 chr6B 86.486 740 67 12 1699 2411 717938636 717937903 0.000000e+00 782.0
32 TraesCS5B01G544500 chr6B 93.962 265 13 3 5963 6224 506346618 506346354 1.260000e-106 398.0
33 TraesCS5B01G544500 chr6B 87.129 101 11 2 2867 2967 88740164 88740066 5.100000e-21 113.0
34 TraesCS5B01G544500 chr1B 81.400 543 73 16 2867 3408 58431024 58430509 9.650000e-113 418.0
35 TraesCS5B01G544500 chr1B 94.297 263 13 2 5963 6224 8992775 8993036 9.720000e-108 401.0
36 TraesCS5B01G544500 chr1B 86.898 374 30 9 1381 1742 667470715 667470349 9.720000e-108 401.0
37 TraesCS5B01G544500 chr1B 93.156 263 12 5 5963 6224 49440011 49439754 1.270000e-101 381.0
38 TraesCS5B01G544500 chr1B 95.833 120 5 0 3522 3641 426475879 426475760 1.770000e-45 195.0
39 TraesCS5B01G544500 chr1B 91.111 135 12 0 3504 3638 77544268 77544402 3.830000e-42 183.0
40 TraesCS5B01G544500 chr1B 80.000 245 32 10 3522 3751 606845426 606845184 1.390000e-36 165.0
41 TraesCS5B01G544500 chr1B 77.165 127 29 0 3515 3641 465968624 465968498 2.410000e-09 75.0
42 TraesCS5B01G544500 chr7B 94.697 264 12 2 5963 6224 7725941 7726204 5.810000e-110 409.0
43 TraesCS5B01G544500 chr7B 93.333 45 3 0 1557 1601 743598661 743598705 4.030000e-07 67.6
44 TraesCS5B01G544500 chrUn 94.275 262 14 1 5963 6224 47879652 47879392 3.500000e-107 399.0
45 TraesCS5B01G544500 chrUn 96.721 122 3 1 3521 3642 39802143 39802263 1.060000e-47 202.0
46 TraesCS5B01G544500 chrUn 96.721 122 3 1 3521 3642 300442919 300443039 1.060000e-47 202.0
47 TraesCS5B01G544500 chrUn 83.036 112 17 2 3641 3751 25997124 25997014 3.970000e-17 100.0
48 TraesCS5B01G544500 chr3B 93.561 264 15 2 5963 6224 168964427 168964164 5.850000e-105 392.0
49 TraesCS5B01G544500 chr3B 80.367 545 76 18 2867 3408 31457425 31456909 9.790000e-103 385.0
50 TraesCS5B01G544500 chr3B 92.424 264 17 3 5963 6224 557124044 557123782 2.120000e-99 374.0
51 TraesCS5B01G544500 chr3B 96.581 117 4 0 3522 3638 380680308 380680192 1.770000e-45 195.0
52 TraesCS5B01G544500 chr3B 93.333 45 3 0 1557 1601 21180204 21180248 4.030000e-07 67.6
53 TraesCS5B01G544500 chr3B 93.333 45 3 0 1557 1601 726923678 726923722 4.030000e-07 67.6
54 TraesCS5B01G544500 chr4D 79.587 436 60 17 2569 3000 452848419 452848829 1.020000e-72 285.0
55 TraesCS5B01G544500 chr1A 78.512 363 52 16 2566 2923 555683435 555683094 1.360000e-51 215.0
56 TraesCS5B01G544500 chr1A 95.238 42 2 0 3520 3561 73304806 73304765 4.030000e-07 67.6
57 TraesCS5B01G544500 chr7A 79.661 295 45 7 1472 1754 310650773 310650482 1.370000e-46 198.0
58 TraesCS5B01G544500 chr7A 77.222 360 51 22 2566 2923 571255112 571254782 1.380000e-41 182.0
59 TraesCS5B01G544500 chr7A 95.413 109 5 0 3643 3751 137821934 137822042 2.310000e-39 174.0
60 TraesCS5B01G544500 chr4B 96.610 118 4 0 3521 3638 663766212 663766095 4.920000e-46 196.0
61 TraesCS5B01G544500 chr4B 93.333 45 3 0 1557 1601 127536274 127536318 4.030000e-07 67.6
62 TraesCS5B01G544500 chr2D 95.082 122 6 0 3521 3642 381869741 381869620 6.370000e-45 193.0
63 TraesCS5B01G544500 chr6D 93.651 126 7 1 3519 3644 136474717 136474593 2.960000e-43 187.0
64 TraesCS5B01G544500 chr6D 88.991 109 11 1 3644 3751 12060501 12060393 3.910000e-27 134.0
65 TraesCS5B01G544500 chr3A 91.818 110 8 1 3642 3751 569380135 569380027 1.080000e-32 152.0
66 TraesCS5B01G544500 chr3A 90.196 51 5 0 1557 1607 59551583 59551533 4.030000e-07 67.6
67 TraesCS5B01G544500 chr2A 83.230 161 21 5 3484 3642 682489584 682489740 6.500000e-30 143.0
68 TraesCS5B01G544500 chr1D 82.927 123 17 4 3644 3764 441207464 441207344 2.370000e-19 108.0
69 TraesCS5B01G544500 chr1D 95.238 42 2 0 3520 3561 73684683 73684642 4.030000e-07 67.6
70 TraesCS5B01G544500 chr5A 78.723 141 26 4 3500 3638 706438888 706439026 2.390000e-14 91.6
71 TraesCS5B01G544500 chr5A 84.810 79 11 1 1525 1603 599247050 599247127 1.860000e-10 78.7
72 TraesCS5B01G544500 chr6A 88.235 51 6 0 1557 1607 120275270 120275220 1.870000e-05 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G544500 chr5B 697112917 697119140 6223 False 5481.50 9077 100.000000 1 6224 2 chr5B.!!$F7 6223
1 TraesCS5B01G544500 chr5B 3366944 3367710 766 False 351.50 484 85.225000 1598 2411 2 chr5B.!!$F6 813
2 TraesCS5B01G544500 chr5D 553677517 553682368 4851 True 1528.75 2885 92.903000 767 5704 4 chr5D.!!$R2 4937
3 TraesCS5B01G544500 chr4A 614866383 614875174 8791 False 1101.00 2809 91.035333 1 5302 6 chr4A.!!$F2 5301
4 TraesCS5B01G544500 chr2B 151480834 151481660 826 True 806.00 806 84.780000 1598 2411 1 chr2B.!!$R1 813
5 TraesCS5B01G544500 chr2B 429140715 429141231 516 False 416.00 416 81.319000 2864 3408 1 chr2B.!!$F4 544
6 TraesCS5B01G544500 chr2B 91804812 91805353 541 False 392.00 392 80.000000 2843 3408 1 chr2B.!!$F2 565
7 TraesCS5B01G544500 chr6B 260708182 260709012 830 False 804.00 804 84.643000 1598 2411 1 chr6B.!!$F1 813
8 TraesCS5B01G544500 chr6B 717937903 717938636 733 True 782.00 782 86.486000 1699 2411 1 chr6B.!!$R3 712
9 TraesCS5B01G544500 chr1B 58430509 58431024 515 True 418.00 418 81.400000 2867 3408 1 chr1B.!!$R2 541
10 TraesCS5B01G544500 chr3B 31456909 31457425 516 True 385.00 385 80.367000 2867 3408 1 chr3B.!!$R1 541

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
763 774 1.295746 GGAGGGTGAGGTTCCGAAC 59.704 63.158 2.37 2.37 0.00 3.95 F
1934 2084 0.037590 TTGCTGCATCCGTAAAGGGT 59.962 50.000 1.84 0.00 41.52 4.34 F
3540 3809 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2316 2547 0.036388 CCCGCTGTCATGGTTAGTGT 60.036 55.0 0.00 0.0 0.00 3.55 R
3615 3884 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.0 5.23 0.0 44.66 2.12 R
5488 5890 0.543749 ACTGGGCCTAAGCACTGATC 59.456 55.0 4.53 0.0 45.43 2.92 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 3.285484 GGCATTGTGAAGACATCTCCAT 58.715 45.455 0.00 0.00 30.13 3.41
96 98 2.808543 GGCTTGGATCCTATTTAGCACG 59.191 50.000 14.23 0.00 0.00 5.34
103 105 5.361571 TGGATCCTATTTAGCACGTAGTTCA 59.638 40.000 14.23 0.00 41.61 3.18
104 106 5.921408 GGATCCTATTTAGCACGTAGTTCAG 59.079 44.000 3.84 0.00 41.61 3.02
107 109 2.823924 TTTAGCACGTAGTTCAGCCA 57.176 45.000 0.00 0.00 41.61 4.75
146 149 1.686110 CCCCCTCTCACCGCTACTT 60.686 63.158 0.00 0.00 0.00 2.24
151 154 1.888436 CTCTCACCGCTACTTGGGCA 61.888 60.000 0.00 0.00 0.00 5.36
178 181 3.756117 AGTAGCTCCTTTCTGGTTTTGG 58.244 45.455 0.00 0.00 37.07 3.28
189 192 4.252570 TCTGGTTTTGGGAAAGTAACCA 57.747 40.909 0.00 0.00 45.64 3.67
190 193 3.955551 TCTGGTTTTGGGAAAGTAACCAC 59.044 43.478 0.00 0.00 43.65 4.16
265 268 9.904198 TTTTCATTCCTTCCTTTTCTCATTTTT 57.096 25.926 0.00 0.00 0.00 1.94
391 395 6.254589 TCCACGTGAACATTTGTTGAATTTTC 59.745 34.615 19.30 0.00 38.56 2.29
432 442 8.748412 CCATAAACATTCTTCTGAACCCATAAA 58.252 33.333 0.00 0.00 34.71 1.40
558 568 8.984482 TTTTGCAAAATCACGAATGTTTTATG 57.016 26.923 20.46 0.00 29.43 1.90
568 578 9.703892 ATCACGAATGTTTTATGATTTTCCAAA 57.296 25.926 0.00 0.00 0.00 3.28
569 579 8.973378 TCACGAATGTTTTATGATTTTCCAAAC 58.027 29.630 0.00 0.00 0.00 2.93
570 580 7.944120 CACGAATGTTTTATGATTTTCCAAACG 59.056 33.333 0.00 0.00 31.24 3.60
664 675 5.941948 ATCCTGACTTGTTTTAAAGACGG 57.058 39.130 0.00 0.00 0.00 4.79
668 679 5.277828 CCTGACTTGTTTTAAAGACGGAAGG 60.278 44.000 0.00 0.00 32.18 3.46
755 766 4.760047 CGCGTTGGGAGGGTGAGG 62.760 72.222 0.00 0.00 0.00 3.86
756 767 3.637273 GCGTTGGGAGGGTGAGGT 61.637 66.667 0.00 0.00 0.00 3.85
757 768 3.157680 CGTTGGGAGGGTGAGGTT 58.842 61.111 0.00 0.00 0.00 3.50
759 770 1.379146 GTTGGGAGGGTGAGGTTCC 59.621 63.158 0.00 0.00 0.00 3.62
761 772 2.284405 GGGAGGGTGAGGTTCCGA 60.284 66.667 0.00 0.00 31.59 4.55
763 774 1.295746 GGAGGGTGAGGTTCCGAAC 59.704 63.158 2.37 2.37 0.00 3.95
765 776 1.530013 GAGGGTGAGGTTCCGAACGA 61.530 60.000 5.19 0.00 0.00 3.85
1365 1420 2.472029 AGGGTTTCCGATCTGATCTGT 58.528 47.619 15.16 0.00 38.33 3.41
1366 1421 2.432510 AGGGTTTCCGATCTGATCTGTC 59.567 50.000 15.16 5.10 38.33 3.51
1367 1422 2.464865 GGTTTCCGATCTGATCTGTCG 58.535 52.381 15.16 13.59 35.29 4.35
1368 1423 1.855360 GTTTCCGATCTGATCTGTCGC 59.145 52.381 15.16 0.45 34.25 5.19
1401 1516 0.179067 ACGACGGTGATTTGTGGTGT 60.179 50.000 0.00 0.00 0.00 4.16
1402 1517 0.511221 CGACGGTGATTTGTGGTGTC 59.489 55.000 0.00 0.00 0.00 3.67
1619 1734 2.571757 CAGGTACGGCTCGCTTGA 59.428 61.111 0.00 0.00 0.00 3.02
1620 1735 1.080093 CAGGTACGGCTCGCTTGAA 60.080 57.895 0.00 0.00 0.00 2.69
1621 1736 0.460284 CAGGTACGGCTCGCTTGAAT 60.460 55.000 0.00 0.00 0.00 2.57
1623 1748 0.459585 GGTACGGCTCGCTTGAATCA 60.460 55.000 0.00 0.00 0.00 2.57
1694 1826 7.306866 CCTGCAGCTTCGATTTAGATACTTAAC 60.307 40.741 8.66 0.00 0.00 2.01
1758 1890 2.957006 AGAGAATTGGCTGGATTGATGC 59.043 45.455 0.00 0.00 0.00 3.91
1880 2027 7.278868 GTGAAGGAAGTAGGTCTCAAATATGTG 59.721 40.741 0.00 0.00 0.00 3.21
1909 2057 5.192327 AGCTTGATGCCTTTATGTAATGC 57.808 39.130 0.00 0.00 44.23 3.56
1917 2066 5.339177 TGCCTTTATGTAATGCGATGTTTG 58.661 37.500 0.00 0.00 0.00 2.93
1918 2067 4.207019 GCCTTTATGTAATGCGATGTTTGC 59.793 41.667 0.00 0.00 0.00 3.68
1922 2072 1.538950 TGTAATGCGATGTTTGCTGCA 59.461 42.857 0.00 0.00 42.22 4.41
1925 2075 0.101759 ATGCGATGTTTGCTGCATCC 59.898 50.000 1.84 0.00 44.21 3.51
1926 2076 1.584483 GCGATGTTTGCTGCATCCG 60.584 57.895 1.84 4.37 39.48 4.18
1927 2077 1.796151 CGATGTTTGCTGCATCCGT 59.204 52.632 1.84 0.00 39.48 4.69
1928 2078 1.006086 CGATGTTTGCTGCATCCGTA 58.994 50.000 1.84 0.00 39.48 4.02
1929 2079 1.396648 CGATGTTTGCTGCATCCGTAA 59.603 47.619 1.84 0.00 39.48 3.18
1930 2080 2.159585 CGATGTTTGCTGCATCCGTAAA 60.160 45.455 1.84 0.00 39.48 2.01
1931 2081 2.987413 TGTTTGCTGCATCCGTAAAG 57.013 45.000 1.84 0.00 0.00 1.85
1932 2082 1.539388 TGTTTGCTGCATCCGTAAAGG 59.461 47.619 1.84 0.00 42.97 3.11
1933 2083 1.135402 GTTTGCTGCATCCGTAAAGGG 60.135 52.381 1.84 0.00 41.52 3.95
1934 2084 0.037590 TTGCTGCATCCGTAAAGGGT 59.962 50.000 1.84 0.00 41.52 4.34
1935 2085 0.392461 TGCTGCATCCGTAAAGGGTC 60.392 55.000 0.00 0.00 41.52 4.46
1936 2086 1.429148 GCTGCATCCGTAAAGGGTCG 61.429 60.000 0.00 0.00 41.52 4.79
1937 2087 0.108329 CTGCATCCGTAAAGGGTCGT 60.108 55.000 0.00 0.00 41.52 4.34
1939 2089 0.108520 GCATCCGTAAAGGGTCGTGA 60.109 55.000 0.00 0.00 41.52 4.35
1940 2090 1.922570 CATCCGTAAAGGGTCGTGAG 58.077 55.000 0.00 0.00 41.52 3.51
1941 2091 1.475280 CATCCGTAAAGGGTCGTGAGA 59.525 52.381 0.00 0.00 41.52 3.27
1950 2100 1.971357 AGGGTCGTGAGAAAGACATGT 59.029 47.619 0.00 0.00 45.01 3.21
1981 2131 4.141620 CCTAGTAACATCACTCCCTTGCAT 60.142 45.833 0.00 0.00 0.00 3.96
2016 2174 4.589908 ACTTCATGTCTTAATGGGACCAC 58.410 43.478 0.00 0.00 33.22 4.16
2024 2182 7.564141 TGTCTTAATGGGACCACGAGTTACG 62.564 48.000 0.00 0.00 39.13 3.18
2070 2228 3.003480 GACTGTTTCAGTGCCCACTATC 58.997 50.000 7.14 0.00 45.44 2.08
2073 2231 2.290260 TGTTTCAGTGCCCACTATCCTG 60.290 50.000 0.00 0.00 40.20 3.86
2098 2256 8.865001 TGTTTTCTTTGTTTATTTACAGCACAC 58.135 29.630 0.00 0.00 0.00 3.82
2248 2467 6.714810 TGATGTTAGTGTTTACTTGCAGGATT 59.285 34.615 1.40 0.00 38.36 3.01
2250 2469 8.630054 ATGTTAGTGTTTACTTGCAGGATTTA 57.370 30.769 1.40 0.00 38.36 1.40
2289 2508 3.977134 TTTATGCCCATGTGTGCAATT 57.023 38.095 5.98 0.00 41.50 2.32
2317 2548 7.518731 TTTTTGTTTGAAGTCACTTGCATAC 57.481 32.000 0.00 0.00 0.00 2.39
2318 2549 5.826601 TTGTTTGAAGTCACTTGCATACA 57.173 34.783 0.00 2.32 0.00 2.29
2326 2557 5.165961 AGTCACTTGCATACACTAACCAT 57.834 39.130 0.00 0.00 0.00 3.55
2383 2614 1.547820 TGTTCTGGCACTTGCACAAAA 59.452 42.857 3.15 0.00 44.36 2.44
2384 2615 2.168106 TGTTCTGGCACTTGCACAAAAT 59.832 40.909 3.15 0.00 44.36 1.82
2385 2616 3.197265 GTTCTGGCACTTGCACAAAATT 58.803 40.909 3.15 0.00 44.36 1.82
2423 2654 9.341899 CCAATACTTTATCACAAAGCACTAAAC 57.658 33.333 0.00 0.00 0.00 2.01
2432 2663 8.621532 ATCACAAAGCACTAAACTAAATCAGA 57.378 30.769 0.00 0.00 0.00 3.27
2433 2664 8.445275 TCACAAAGCACTAAACTAAATCAGAA 57.555 30.769 0.00 0.00 0.00 3.02
2434 2665 9.066892 TCACAAAGCACTAAACTAAATCAGAAT 57.933 29.630 0.00 0.00 0.00 2.40
2453 2684 6.604396 TCAGAATATGAAGTGATTGCATGGTT 59.396 34.615 0.00 0.00 34.02 3.67
2459 2690 6.587206 TGAAGTGATTGCATGGTTTGATTA 57.413 33.333 0.00 0.00 0.00 1.75
2490 2721 3.902150 CTGTTTTCGTACAGCTCTCTCA 58.098 45.455 0.00 0.00 39.12 3.27
2544 2797 8.561738 TTCTTTTGTTAGACCATGTATCTTCC 57.438 34.615 2.32 0.00 0.00 3.46
2560 2813 6.701841 TGTATCTTCCGCTTAATGTTCATCTC 59.298 38.462 0.00 0.00 0.00 2.75
2565 2818 6.405278 TCCGCTTAATGTTCATCTCTCATA 57.595 37.500 0.00 0.00 0.00 2.15
2613 2866 3.009723 GCCATTAGCAGTTAAGCACTCA 58.990 45.455 0.00 0.00 42.97 3.41
2795 3048 3.648339 ATCAAAACATTGAGCAGCGTT 57.352 38.095 0.00 0.00 34.02 4.84
2823 3076 5.334724 GCTGGAAAAGTGAGAAGAATGACTG 60.335 44.000 0.00 0.00 0.00 3.51
2827 3080 5.686159 AAAGTGAGAAGAATGACTGCTTG 57.314 39.130 0.00 0.00 34.02 4.01
2898 3152 6.762333 TGAGCATGCACTGTAGATATATGTT 58.238 36.000 21.98 0.00 0.00 2.71
3216 3480 9.643693 CAATTGGCAATAATAGAACTTTGAAGT 57.356 29.630 14.05 0.00 42.04 3.01
3255 3520 7.092137 TGCATTCATGAGAAACCTTTCTATG 57.908 36.000 0.14 2.60 46.84 2.23
3381 3647 5.339008 AGGACAAAAAGAAACCAAAGGAC 57.661 39.130 0.00 0.00 0.00 3.85
3527 3796 9.232473 AGTTCAAATATCTTTTCTTGTACTCCC 57.768 33.333 0.00 0.00 27.18 4.30
3528 3797 9.232473 GTTCAAATATCTTTTCTTGTACTCCCT 57.768 33.333 0.00 0.00 0.00 4.20
3529 3798 9.449719 TTCAAATATCTTTTCTTGTACTCCCTC 57.550 33.333 0.00 0.00 0.00 4.30
3530 3799 8.047310 TCAAATATCTTTTCTTGTACTCCCTCC 58.953 37.037 0.00 0.00 0.00 4.30
3531 3800 3.955650 TCTTTTCTTGTACTCCCTCCG 57.044 47.619 0.00 0.00 0.00 4.63
3532 3801 3.236896 TCTTTTCTTGTACTCCCTCCGT 58.763 45.455 0.00 0.00 0.00 4.69
3533 3802 3.257624 TCTTTTCTTGTACTCCCTCCGTC 59.742 47.826 0.00 0.00 0.00 4.79
3534 3803 1.553706 TTCTTGTACTCCCTCCGTCC 58.446 55.000 0.00 0.00 0.00 4.79
3535 3804 0.679002 TCTTGTACTCCCTCCGTCCG 60.679 60.000 0.00 0.00 0.00 4.79
3536 3805 1.664321 CTTGTACTCCCTCCGTCCGG 61.664 65.000 0.00 0.00 0.00 5.14
3537 3806 2.141011 TTGTACTCCCTCCGTCCGGA 62.141 60.000 0.00 0.00 42.90 5.14
3538 3807 1.379044 GTACTCCCTCCGTCCGGAA 60.379 63.158 5.23 0.00 44.66 4.30
3539 3808 0.967380 GTACTCCCTCCGTCCGGAAA 60.967 60.000 5.23 0.00 44.66 3.13
3540 3809 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
3541 3810 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
3542 3811 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
3543 3812 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
3544 3813 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
3545 3814 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
3546 3815 1.206371 CCTCCGTCCGGAAATACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
3547 3816 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
3548 3817 1.135315 TCCGTCCGGAAATACTTGTCG 60.135 52.381 5.23 1.25 42.05 4.35
3549 3818 1.274596 CGTCCGGAAATACTTGTCGG 58.725 55.000 5.23 0.00 41.80 4.79
3550 3819 1.135315 CGTCCGGAAATACTTGTCGGA 60.135 52.381 5.23 0.00 46.06 4.55
3551 3820 2.953466 TCCGGAAATACTTGTCGGAG 57.047 50.000 0.00 0.00 43.84 4.63
3552 3821 2.449464 TCCGGAAATACTTGTCGGAGA 58.551 47.619 0.00 0.00 43.84 3.71
3553 3822 2.827322 TCCGGAAATACTTGTCGGAGAA 59.173 45.455 0.00 0.00 43.84 2.87
3554 3823 3.258872 TCCGGAAATACTTGTCGGAGAAA 59.741 43.478 0.00 0.00 43.84 2.52
3555 3824 4.081309 TCCGGAAATACTTGTCGGAGAAAT 60.081 41.667 0.00 0.00 43.84 2.17
3556 3825 4.034048 CCGGAAATACTTGTCGGAGAAATG 59.966 45.833 0.00 0.00 42.94 2.32
3557 3826 4.494199 CGGAAATACTTGTCGGAGAAATGC 60.494 45.833 0.00 0.00 39.69 3.56
3558 3827 4.394920 GGAAATACTTGTCGGAGAAATGCA 59.605 41.667 0.00 0.00 39.69 3.96
3559 3828 5.066505 GGAAATACTTGTCGGAGAAATGCAT 59.933 40.000 0.00 0.00 39.69 3.96
3560 3829 6.260050 GGAAATACTTGTCGGAGAAATGCATA 59.740 38.462 0.00 0.00 39.69 3.14
3561 3830 7.201696 GGAAATACTTGTCGGAGAAATGCATAA 60.202 37.037 0.00 0.00 39.69 1.90
3562 3831 7.624360 AATACTTGTCGGAGAAATGCATAAA 57.376 32.000 0.00 0.00 39.69 1.40
3563 3832 5.957842 ACTTGTCGGAGAAATGCATAAAA 57.042 34.783 0.00 0.00 39.69 1.52
3564 3833 6.325919 ACTTGTCGGAGAAATGCATAAAAA 57.674 33.333 0.00 0.00 39.69 1.94
3565 3834 6.149633 ACTTGTCGGAGAAATGCATAAAAAC 58.850 36.000 0.00 0.00 39.69 2.43
3566 3835 4.717991 TGTCGGAGAAATGCATAAAAACG 58.282 39.130 0.00 3.03 39.69 3.60
3567 3836 4.095610 GTCGGAGAAATGCATAAAAACGG 58.904 43.478 0.00 0.00 39.69 4.44
3568 3837 4.004314 TCGGAGAAATGCATAAAAACGGA 58.996 39.130 0.00 0.00 0.00 4.69
3569 3838 4.638421 TCGGAGAAATGCATAAAAACGGAT 59.362 37.500 0.00 0.00 0.00 4.18
3570 3839 4.734854 CGGAGAAATGCATAAAAACGGATG 59.265 41.667 0.00 0.00 0.00 3.51
3571 3840 5.650543 GGAGAAATGCATAAAAACGGATGT 58.349 37.500 0.00 0.00 0.00 3.06
3572 3841 6.457663 CGGAGAAATGCATAAAAACGGATGTA 60.458 38.462 0.00 0.00 0.00 2.29
3573 3842 7.425606 GGAGAAATGCATAAAAACGGATGTAT 58.574 34.615 0.00 0.00 30.71 2.29
3574 3843 7.591426 GGAGAAATGCATAAAAACGGATGTATC 59.409 37.037 0.00 0.00 29.41 2.24
3575 3844 8.225603 AGAAATGCATAAAAACGGATGTATCT 57.774 30.769 0.00 0.00 29.41 1.98
3576 3845 8.686334 AGAAATGCATAAAAACGGATGTATCTT 58.314 29.630 0.00 0.00 29.41 2.40
3577 3846 9.944663 GAAATGCATAAAAACGGATGTATCTTA 57.055 29.630 0.00 0.00 29.41 2.10
3580 3849 9.730420 ATGCATAAAAACGGATGTATCTTAAAC 57.270 29.630 0.00 0.00 0.00 2.01
3581 3850 8.952278 TGCATAAAAACGGATGTATCTTAAACT 58.048 29.630 0.00 0.00 0.00 2.66
3590 3859 9.807649 ACGGATGTATCTTAAACTAAAATACGT 57.192 29.630 0.00 0.00 0.00 3.57
3610 3879 9.702253 AATACGTATAGATACATCCATTCCTCT 57.298 33.333 8.83 0.00 32.87 3.69
3611 3880 7.397892 ACGTATAGATACATCCATTCCTCTG 57.602 40.000 0.00 0.00 32.87 3.35
3612 3881 7.175797 ACGTATAGATACATCCATTCCTCTGA 58.824 38.462 0.00 0.00 32.87 3.27
3613 3882 7.121463 ACGTATAGATACATCCATTCCTCTGAC 59.879 40.741 0.00 0.00 32.87 3.51
3614 3883 7.121315 CGTATAGATACATCCATTCCTCTGACA 59.879 40.741 0.89 0.00 32.87 3.58
3615 3884 7.862274 ATAGATACATCCATTCCTCTGACAA 57.138 36.000 0.00 0.00 0.00 3.18
3616 3885 6.172136 AGATACATCCATTCCTCTGACAAG 57.828 41.667 0.00 0.00 0.00 3.16
3617 3886 5.664908 AGATACATCCATTCCTCTGACAAGT 59.335 40.000 0.00 0.00 0.00 3.16
3618 3887 6.841229 AGATACATCCATTCCTCTGACAAGTA 59.159 38.462 0.00 0.00 0.00 2.24
3619 3888 5.965033 ACATCCATTCCTCTGACAAGTAT 57.035 39.130 0.00 0.00 0.00 2.12
3620 3889 6.319048 ACATCCATTCCTCTGACAAGTATT 57.681 37.500 0.00 0.00 0.00 1.89
3621 3890 6.725364 ACATCCATTCCTCTGACAAGTATTT 58.275 36.000 0.00 0.00 0.00 1.40
3622 3891 6.825721 ACATCCATTCCTCTGACAAGTATTTC 59.174 38.462 0.00 0.00 0.00 2.17
3623 3892 5.745227 TCCATTCCTCTGACAAGTATTTCC 58.255 41.667 0.00 0.00 0.00 3.13
3624 3893 4.572389 CCATTCCTCTGACAAGTATTTCCG 59.428 45.833 0.00 0.00 0.00 4.30
3625 3894 3.887621 TCCTCTGACAAGTATTTCCGG 57.112 47.619 0.00 0.00 0.00 5.14
3626 3895 3.437213 TCCTCTGACAAGTATTTCCGGA 58.563 45.455 0.00 0.00 0.00 5.14
3627 3896 3.194968 TCCTCTGACAAGTATTTCCGGAC 59.805 47.826 1.83 0.00 0.00 4.79
3628 3897 3.179830 CTCTGACAAGTATTTCCGGACG 58.820 50.000 1.83 0.00 0.00 4.79
3629 3898 2.094390 TCTGACAAGTATTTCCGGACGG 60.094 50.000 1.83 3.96 0.00 4.79
3630 3899 1.894466 TGACAAGTATTTCCGGACGGA 59.106 47.619 1.83 9.76 43.52 4.69
3631 3900 2.094390 TGACAAGTATTTCCGGACGGAG 60.094 50.000 13.64 3.15 46.06 4.63
3632 3901 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
3633 3902 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
3634 3903 0.032813 AGTATTTCCGGACGGAGGGA 60.033 55.000 13.64 4.95 46.06 4.20
3635 3904 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
3636 3905 0.032813 TATTTCCGGACGGAGGGAGT 60.033 55.000 13.64 0.00 46.06 3.85
3637 3906 0.032813 ATTTCCGGACGGAGGGAGTA 60.033 55.000 13.64 0.00 46.06 2.59
3638 3907 0.251742 TTTCCGGACGGAGGGAGTAA 60.252 55.000 13.64 1.47 46.06 2.24
3639 3908 0.032813 TTCCGGACGGAGGGAGTAAT 60.033 55.000 13.64 0.00 46.06 1.89
3640 3909 0.846015 TCCGGACGGAGGGAGTAATA 59.154 55.000 9.76 0.00 39.76 0.98
3641 3910 1.426598 TCCGGACGGAGGGAGTAATAT 59.573 52.381 9.76 0.00 39.76 1.28
3642 3911 1.544691 CCGGACGGAGGGAGTAATATG 59.455 57.143 4.40 0.00 37.50 1.78
3643 3912 2.236766 CGGACGGAGGGAGTAATATGT 58.763 52.381 0.00 0.00 0.00 2.29
3644 3913 3.415212 CGGACGGAGGGAGTAATATGTA 58.585 50.000 0.00 0.00 0.00 2.29
3645 3914 3.190118 CGGACGGAGGGAGTAATATGTAC 59.810 52.174 0.00 0.00 0.00 2.90
3646 3915 4.405548 GGACGGAGGGAGTAATATGTACT 58.594 47.826 0.00 0.00 0.00 2.73
3647 3916 4.458642 GGACGGAGGGAGTAATATGTACTC 59.541 50.000 12.79 12.79 42.28 2.59
3657 3926 7.584122 GAGTAATATGTACTCCCTCTGTTCA 57.416 40.000 11.18 0.00 38.33 3.18
3658 3927 7.349412 AGTAATATGTACTCCCTCTGTTCAC 57.651 40.000 0.00 0.00 0.00 3.18
3659 3928 7.126733 AGTAATATGTACTCCCTCTGTTCACT 58.873 38.462 0.00 0.00 0.00 3.41
3660 3929 6.875972 AATATGTACTCCCTCTGTTCACTT 57.124 37.500 0.00 0.00 0.00 3.16
3661 3930 6.875972 ATATGTACTCCCTCTGTTCACTTT 57.124 37.500 0.00 0.00 0.00 2.66
3662 3931 5.568620 ATGTACTCCCTCTGTTCACTTTT 57.431 39.130 0.00 0.00 0.00 2.27
3663 3932 4.703897 TGTACTCCCTCTGTTCACTTTTG 58.296 43.478 0.00 0.00 0.00 2.44
3664 3933 3.933861 ACTCCCTCTGTTCACTTTTGT 57.066 42.857 0.00 0.00 0.00 2.83
3665 3934 5.364446 TGTACTCCCTCTGTTCACTTTTGTA 59.636 40.000 0.00 0.00 0.00 2.41
3666 3935 5.367945 ACTCCCTCTGTTCACTTTTGTAA 57.632 39.130 0.00 0.00 0.00 2.41
3667 3936 5.368989 ACTCCCTCTGTTCACTTTTGTAAG 58.631 41.667 0.00 0.00 37.40 2.34
3668 3937 5.130477 ACTCCCTCTGTTCACTTTTGTAAGA 59.870 40.000 0.00 0.00 35.30 2.10
3669 3938 5.365619 TCCCTCTGTTCACTTTTGTAAGAC 58.634 41.667 0.00 0.00 35.30 3.01
3670 3939 4.211374 CCCTCTGTTCACTTTTGTAAGACG 59.789 45.833 0.00 0.00 35.30 4.18
3671 3940 4.318831 CCTCTGTTCACTTTTGTAAGACGC 60.319 45.833 0.00 0.00 35.30 5.19
3672 3941 4.439057 TCTGTTCACTTTTGTAAGACGCT 58.561 39.130 0.00 0.00 35.30 5.07
3673 3942 4.270084 TCTGTTCACTTTTGTAAGACGCTG 59.730 41.667 0.00 0.00 35.30 5.18
3674 3943 3.936453 TGTTCACTTTTGTAAGACGCTGT 59.064 39.130 0.00 0.00 35.30 4.40
3675 3944 5.110598 TGTTCACTTTTGTAAGACGCTGTA 58.889 37.500 0.00 0.00 35.30 2.74
3676 3945 5.233476 TGTTCACTTTTGTAAGACGCTGTAG 59.767 40.000 0.00 0.00 35.30 2.74
3677 3946 3.739300 TCACTTTTGTAAGACGCTGTAGC 59.261 43.478 0.00 0.00 35.30 3.58
3678 3947 3.064931 ACTTTTGTAAGACGCTGTAGCC 58.935 45.455 0.00 0.00 34.92 3.93
3679 3948 2.823924 TTTGTAAGACGCTGTAGCCA 57.176 45.000 0.00 0.00 37.91 4.75
3680 3949 3.328382 TTTGTAAGACGCTGTAGCCAT 57.672 42.857 0.00 0.00 37.91 4.40
3681 3950 3.328382 TTGTAAGACGCTGTAGCCATT 57.672 42.857 0.00 0.00 37.91 3.16
3682 3951 3.328382 TGTAAGACGCTGTAGCCATTT 57.672 42.857 0.00 0.00 37.91 2.32
3683 3952 3.259064 TGTAAGACGCTGTAGCCATTTC 58.741 45.455 0.00 0.00 37.91 2.17
3684 3953 2.472695 AAGACGCTGTAGCCATTTCA 57.527 45.000 0.00 0.00 37.91 2.69
3685 3954 2.015736 AGACGCTGTAGCCATTTCAG 57.984 50.000 0.00 0.00 37.91 3.02
3686 3955 1.550524 AGACGCTGTAGCCATTTCAGA 59.449 47.619 0.00 0.00 37.91 3.27
3687 3956 1.661112 GACGCTGTAGCCATTTCAGAC 59.339 52.381 0.00 0.00 37.91 3.51
3688 3957 1.001974 ACGCTGTAGCCATTTCAGACA 59.998 47.619 0.00 0.00 37.91 3.41
3689 3958 1.662629 CGCTGTAGCCATTTCAGACAG 59.337 52.381 0.00 0.00 40.39 3.51
3691 3960 2.703416 CTGTAGCCATTTCAGACAGCA 58.297 47.619 0.00 0.00 31.88 4.41
3692 3961 2.676839 CTGTAGCCATTTCAGACAGCAG 59.323 50.000 0.00 0.00 31.88 4.24
3693 3962 2.038952 TGTAGCCATTTCAGACAGCAGT 59.961 45.455 0.00 0.00 0.00 4.40
3694 3963 1.531423 AGCCATTTCAGACAGCAGTG 58.469 50.000 0.00 0.00 0.00 3.66
3695 3964 1.072806 AGCCATTTCAGACAGCAGTGA 59.927 47.619 0.00 0.00 0.00 3.41
3696 3965 1.881973 GCCATTTCAGACAGCAGTGAA 59.118 47.619 0.00 0.00 0.00 3.18
3697 3966 2.294233 GCCATTTCAGACAGCAGTGAAA 59.706 45.455 0.00 0.34 44.57 2.69
3698 3967 3.243501 GCCATTTCAGACAGCAGTGAAAA 60.244 43.478 0.00 0.00 43.88 2.29
3699 3968 4.293415 CCATTTCAGACAGCAGTGAAAAC 58.707 43.478 0.00 0.00 43.88 2.43
3700 3969 4.202040 CCATTTCAGACAGCAGTGAAAACA 60.202 41.667 0.00 0.00 43.88 2.83
3701 3970 4.621068 TTTCAGACAGCAGTGAAAACAG 57.379 40.909 0.00 0.00 39.22 3.16
3702 3971 3.266510 TCAGACAGCAGTGAAAACAGT 57.733 42.857 0.00 0.00 0.00 3.55
3703 3972 3.609853 TCAGACAGCAGTGAAAACAGTT 58.390 40.909 0.00 0.00 0.00 3.16
3704 3973 3.623060 TCAGACAGCAGTGAAAACAGTTC 59.377 43.478 0.00 0.00 0.00 3.01
3705 3974 3.374988 CAGACAGCAGTGAAAACAGTTCA 59.625 43.478 0.00 0.00 0.00 3.18
3706 3975 4.009675 AGACAGCAGTGAAAACAGTTCAA 58.990 39.130 0.00 0.00 0.00 2.69
3707 3976 4.641989 AGACAGCAGTGAAAACAGTTCAAT 59.358 37.500 0.00 0.00 0.00 2.57
3708 3977 4.675510 ACAGCAGTGAAAACAGTTCAATG 58.324 39.130 11.11 11.11 44.46 2.82
3709 3978 4.158394 ACAGCAGTGAAAACAGTTCAATGT 59.842 37.500 15.38 5.47 43.79 2.71
3710 3979 4.736793 CAGCAGTGAAAACAGTTCAATGTC 59.263 41.667 15.38 9.41 43.79 3.06
3711 3980 4.641989 AGCAGTGAAAACAGTTCAATGTCT 59.358 37.500 15.38 11.02 43.79 3.41
3712 3981 4.736793 GCAGTGAAAACAGTTCAATGTCTG 59.263 41.667 15.38 8.51 43.79 3.51
3713 3982 4.736793 CAGTGAAAACAGTTCAATGTCTGC 59.263 41.667 8.04 0.00 39.02 4.26
3714 3983 4.641989 AGTGAAAACAGTTCAATGTCTGCT 59.358 37.500 7.72 0.00 35.37 4.24
3715 3984 4.736793 GTGAAAACAGTTCAATGTCTGCTG 59.263 41.667 7.72 0.00 35.37 4.41
3716 3985 4.398988 TGAAAACAGTTCAATGTCTGCTGT 59.601 37.500 7.72 0.00 41.51 4.40
3717 3986 4.558538 AAACAGTTCAATGTCTGCTGTC 57.441 40.909 0.00 0.00 39.19 3.51
3718 3987 3.482156 ACAGTTCAATGTCTGCTGTCT 57.518 42.857 7.72 0.00 35.78 3.41
3719 3988 3.136763 ACAGTTCAATGTCTGCTGTCTG 58.863 45.455 7.72 0.00 35.78 3.51
3720 3989 3.181462 ACAGTTCAATGTCTGCTGTCTGA 60.181 43.478 7.72 0.00 35.78 3.27
3721 3990 3.811497 CAGTTCAATGTCTGCTGTCTGAA 59.189 43.478 0.00 0.00 0.00 3.02
3722 3991 4.274214 CAGTTCAATGTCTGCTGTCTGAAA 59.726 41.667 0.00 0.00 0.00 2.69
3723 3992 4.274459 AGTTCAATGTCTGCTGTCTGAAAC 59.726 41.667 0.00 0.00 0.00 2.78
3724 3993 2.802247 TCAATGTCTGCTGTCTGAAACG 59.198 45.455 0.00 0.00 0.00 3.60
3725 3994 2.533266 ATGTCTGCTGTCTGAAACGT 57.467 45.000 0.00 0.00 0.00 3.99
3726 3995 1.852942 TGTCTGCTGTCTGAAACGTC 58.147 50.000 0.00 0.00 0.00 4.34
3727 3996 1.409064 TGTCTGCTGTCTGAAACGTCT 59.591 47.619 0.00 0.00 0.00 4.18
3728 3997 2.159099 TGTCTGCTGTCTGAAACGTCTT 60.159 45.455 0.00 0.00 0.00 3.01
3729 3998 3.067601 TGTCTGCTGTCTGAAACGTCTTA 59.932 43.478 0.00 0.00 0.00 2.10
3730 3999 4.238514 GTCTGCTGTCTGAAACGTCTTAT 58.761 43.478 0.00 0.00 0.00 1.73
3731 4000 5.048294 TGTCTGCTGTCTGAAACGTCTTATA 60.048 40.000 0.00 0.00 0.00 0.98
3732 4001 5.862323 GTCTGCTGTCTGAAACGTCTTATAA 59.138 40.000 0.00 0.00 0.00 0.98
3733 4002 6.365247 GTCTGCTGTCTGAAACGTCTTATAAA 59.635 38.462 0.00 0.00 0.00 1.40
3734 4003 6.926826 TCTGCTGTCTGAAACGTCTTATAAAA 59.073 34.615 0.00 0.00 0.00 1.52
3735 4004 7.439955 TCTGCTGTCTGAAACGTCTTATAAAAA 59.560 33.333 0.00 0.00 0.00 1.94
3736 4005 8.094798 TGCTGTCTGAAACGTCTTATAAAAAT 57.905 30.769 0.00 0.00 0.00 1.82
3737 4006 8.564574 TGCTGTCTGAAACGTCTTATAAAAATT 58.435 29.630 0.00 0.00 0.00 1.82
3745 4014 9.481800 GAAACGTCTTATAAAAATTAACGGAGG 57.518 33.333 0.00 0.00 33.26 4.30
3746 4015 7.543947 ACGTCTTATAAAAATTAACGGAGGG 57.456 36.000 0.00 0.00 33.26 4.30
3747 4016 7.330262 ACGTCTTATAAAAATTAACGGAGGGA 58.670 34.615 0.00 0.00 33.26 4.20
4000 4273 8.418597 TTCCTGTTAGGTATCCTACATGTATC 57.581 38.462 5.91 0.00 35.63 2.24
4003 4276 7.670140 CCTGTTAGGTATCCTACATGTATCTGA 59.330 40.741 5.91 4.33 35.63 3.27
4004 4277 8.405418 TGTTAGGTATCCTACATGTATCTGAC 57.595 38.462 5.91 0.01 35.63 3.51
4313 4653 3.234353 TCACTCACCTCTCTGTGATTGT 58.766 45.455 10.13 0.00 43.86 2.71
4507 4847 3.940209 TGCATGCCTTTGAAGTTTAGG 57.060 42.857 16.68 0.00 0.00 2.69
4524 4864 8.934023 AAGTTTAGGATTTCTGATTTACACCA 57.066 30.769 0.00 0.00 0.00 4.17
4528 4868 5.178797 AGGATTTCTGATTTACACCAGACG 58.821 41.667 0.00 0.00 38.95 4.18
4554 4900 5.237344 GCCTTACCTAATGCTCACTTATGTG 59.763 44.000 2.36 2.36 45.07 3.21
4792 5138 6.210796 TCTTTGTGCTTGTCAATTGATCTTG 58.789 36.000 12.12 4.13 0.00 3.02
4910 5256 4.042187 AGGTCTGCATTTCCTAACTTCAGT 59.958 41.667 3.18 0.00 0.00 3.41
4942 5298 7.287696 ACCTTGTTTTCATTAATCCTCTGTTGT 59.712 33.333 0.00 0.00 0.00 3.32
5040 5396 0.895530 TCTCGGACATGGTGAACTCC 59.104 55.000 0.00 0.00 0.00 3.85
5115 5471 2.589157 CCAGGACAGCAACGGGGTA 61.589 63.158 0.00 0.00 0.00 3.69
5241 5602 5.070847 AGCCTGAAGTGAACCATTTTGAATT 59.929 36.000 0.00 0.00 0.00 2.17
5242 5603 5.178067 GCCTGAAGTGAACCATTTTGAATTG 59.822 40.000 0.00 0.00 0.00 2.32
5243 5604 5.697633 CCTGAAGTGAACCATTTTGAATTGG 59.302 40.000 3.72 3.72 39.02 3.16
5244 5605 6.462768 CCTGAAGTGAACCATTTTGAATTGGA 60.463 38.462 10.67 0.00 36.79 3.53
5258 5619 3.448301 TGAATTGGATGAATGGCCTTGTC 59.552 43.478 3.32 0.00 0.00 3.18
5265 5628 3.350219 TGAATGGCCTTGTCTAGGTTC 57.650 47.619 3.32 0.00 46.61 3.62
5281 5644 2.748532 AGGTTCTGTGCGTAGTAGACTC 59.251 50.000 0.00 0.00 0.00 3.36
5283 5646 3.937706 GGTTCTGTGCGTAGTAGACTCTA 59.062 47.826 0.00 0.00 0.00 2.43
5285 5648 5.503498 GTTCTGTGCGTAGTAGACTCTATG 58.497 45.833 0.00 0.00 0.00 2.23
5286 5649 4.127907 TCTGTGCGTAGTAGACTCTATGG 58.872 47.826 0.00 0.00 0.00 2.74
5287 5650 4.127907 CTGTGCGTAGTAGACTCTATGGA 58.872 47.826 0.00 0.00 0.00 3.41
5288 5651 4.715713 TGTGCGTAGTAGACTCTATGGAT 58.284 43.478 0.00 0.00 31.90 3.41
5289 5652 4.755629 TGTGCGTAGTAGACTCTATGGATC 59.244 45.833 0.00 0.00 31.90 3.36
5304 5667 7.782168 ACTCTATGGATCTCTGATTTCACACTA 59.218 37.037 0.00 0.00 0.00 2.74
5311 5674 5.970592 TCTCTGATTTCACACTATCACTGG 58.029 41.667 0.00 0.00 0.00 4.00
5313 5676 6.382282 TCTCTGATTTCACACTATCACTGGAT 59.618 38.462 0.00 0.00 37.55 3.41
5315 5678 6.155049 TCTGATTTCACACTATCACTGGATGA 59.845 38.462 0.00 0.00 43.13 2.92
5337 5702 8.715191 ATGAGTAAAACTATTCTCTGCTCAAG 57.285 34.615 0.00 0.00 34.72 3.02
5431 5833 7.915508 TGACGGATACTATTTGCTGTATTTTG 58.084 34.615 0.00 0.00 30.49 2.44
5488 5890 2.477825 CGAACCTGGATGTATCTGCTG 58.522 52.381 0.00 0.00 0.00 4.41
5492 5894 3.311990 ACCTGGATGTATCTGCTGATCA 58.688 45.455 9.62 8.45 34.32 2.92
5494 5896 3.324268 CCTGGATGTATCTGCTGATCAGT 59.676 47.826 23.38 6.69 43.32 3.41
5497 5899 3.244146 GGATGTATCTGCTGATCAGTGCT 60.244 47.826 23.38 11.08 43.32 4.40
5501 5903 2.975732 TCTGCTGATCAGTGCTTAGG 57.024 50.000 23.38 6.89 43.32 2.69
5540 5942 1.961277 CTGGGAGACGCGCTTGTTT 60.961 57.895 5.73 0.00 0.00 2.83
5578 5980 0.539438 TTTGTACCAGGCCCTTGCAG 60.539 55.000 0.00 0.00 40.13 4.41
5585 5987 1.338389 CCAGGCCCTTGCAGATTTTTG 60.338 52.381 0.00 0.00 40.13 2.44
5603 6005 5.710513 TTTTGCTTGCTCTGTTCATGTAT 57.289 34.783 0.00 0.00 0.00 2.29
5604 6006 4.952262 TTGCTTGCTCTGTTCATGTATC 57.048 40.909 0.00 0.00 0.00 2.24
5613 6015 7.262048 TGCTCTGTTCATGTATCGTTTACATA 58.738 34.615 11.57 0.00 36.49 2.29
5614 6016 7.762159 TGCTCTGTTCATGTATCGTTTACATAA 59.238 33.333 11.57 0.00 36.49 1.90
5617 6019 8.600625 TCTGTTCATGTATCGTTTACATAAAGC 58.399 33.333 11.57 7.54 36.49 3.51
5619 6021 7.063662 TGTTCATGTATCGTTTACATAAAGCGT 59.936 33.333 11.57 0.00 36.49 5.07
5620 6022 8.533965 GTTCATGTATCGTTTACATAAAGCGTA 58.466 33.333 11.57 0.00 36.49 4.42
5627 6147 4.210537 CGTTTACATAAAGCGTATGGGAGG 59.789 45.833 13.09 3.42 0.00 4.30
5637 6157 0.106149 GTATGGGAGGTGTAAGCCCG 59.894 60.000 0.00 0.00 45.08 6.13
5664 6184 1.252904 TTGGCCTTCTGCTTGCATCC 61.253 55.000 3.32 0.00 40.92 3.51
5704 6224 0.469705 AGAGCGGGCTGAGAGATGAT 60.470 55.000 0.00 0.00 0.00 2.45
5705 6225 0.319727 GAGCGGGCTGAGAGATGATG 60.320 60.000 0.00 0.00 0.00 3.07
5706 6226 1.047596 AGCGGGCTGAGAGATGATGT 61.048 55.000 0.00 0.00 0.00 3.06
5707 6227 0.879400 GCGGGCTGAGAGATGATGTG 60.879 60.000 0.00 0.00 0.00 3.21
5708 6228 0.463204 CGGGCTGAGAGATGATGTGT 59.537 55.000 0.00 0.00 0.00 3.72
5715 6247 4.248859 CTGAGAGATGATGTGTTTTCCGT 58.751 43.478 0.00 0.00 0.00 4.69
5721 6253 5.519722 AGATGATGTGTTTTCCGTTTTGTC 58.480 37.500 0.00 0.00 0.00 3.18
5723 6255 2.546195 TGTGTTTTCCGTTTTGTCCG 57.454 45.000 0.00 0.00 0.00 4.79
5726 6258 1.193644 GTTTTCCGTTTTGTCCGTGC 58.806 50.000 0.00 0.00 0.00 5.34
5728 6260 2.049475 TTTCCGTTTTGTCCGTGCCG 62.049 55.000 0.00 0.00 0.00 5.69
5735 6267 1.994507 TTTGTCCGTGCCGTTGTTGG 61.995 55.000 0.00 0.00 0.00 3.77
5737 6269 2.897846 TCCGTGCCGTTGTTGGTG 60.898 61.111 0.00 0.00 0.00 4.17
5738 6270 3.959975 CCGTGCCGTTGTTGGTGG 61.960 66.667 0.00 0.00 0.00 4.61
5744 6276 2.639286 CGTTGTTGGTGGCTGCTC 59.361 61.111 0.00 0.00 0.00 4.26
5745 6277 1.893808 CGTTGTTGGTGGCTGCTCT 60.894 57.895 0.00 0.00 0.00 4.09
5746 6278 1.845809 CGTTGTTGGTGGCTGCTCTC 61.846 60.000 0.00 0.00 0.00 3.20
5748 6280 0.183492 TTGTTGGTGGCTGCTCTCTT 59.817 50.000 0.00 0.00 0.00 2.85
5750 6282 1.601759 TTGGTGGCTGCTCTCTTGC 60.602 57.895 0.00 0.00 0.00 4.01
5751 6283 3.123620 GGTGGCTGCTCTCTTGCG 61.124 66.667 0.00 0.00 35.36 4.85
5752 6284 2.358003 GTGGCTGCTCTCTTGCGT 60.358 61.111 0.00 0.00 35.36 5.24
5753 6285 2.357881 TGGCTGCTCTCTTGCGTG 60.358 61.111 0.00 0.00 35.36 5.34
5754 6286 2.358003 GGCTGCTCTCTTGCGTGT 60.358 61.111 0.00 0.00 35.36 4.49
5756 6288 0.670546 GGCTGCTCTCTTGCGTGTAA 60.671 55.000 0.00 0.00 35.36 2.41
5757 6289 1.148310 GCTGCTCTCTTGCGTGTAAA 58.852 50.000 0.00 0.00 35.36 2.01
5759 6291 2.930040 GCTGCTCTCTTGCGTGTAAATA 59.070 45.455 0.00 0.00 35.36 1.40
5760 6292 3.242123 GCTGCTCTCTTGCGTGTAAATAC 60.242 47.826 0.00 0.00 35.36 1.89
5761 6293 3.920446 TGCTCTCTTGCGTGTAAATACA 58.080 40.909 0.00 0.00 35.36 2.29
5762 6294 3.926527 TGCTCTCTTGCGTGTAAATACAG 59.073 43.478 0.00 0.00 36.78 2.74
5773 6330 4.673580 CGTGTAAATACAGTACTGAGCCGT 60.674 45.833 29.30 9.00 36.78 5.68
5774 6331 5.447683 CGTGTAAATACAGTACTGAGCCGTA 60.448 44.000 29.30 11.02 36.78 4.02
5780 6337 8.859236 AAATACAGTACTGAGCCGTATAGATA 57.141 34.615 29.30 6.86 0.00 1.98
5785 6342 5.881443 AGTACTGAGCCGTATAGATATGGAC 59.119 44.000 11.33 5.55 41.06 4.02
5792 6349 4.381718 GCCGTATAGATATGGACCTTGGTC 60.382 50.000 11.13 11.13 41.06 4.02
5804 6361 3.658398 CTTGGTCAGGACTTGGCAT 57.342 52.632 0.00 0.00 31.20 4.40
5806 6363 0.895100 TTGGTCAGGACTTGGCATGC 60.895 55.000 9.90 9.90 31.20 4.06
5821 6378 1.990799 CATGCTTGCAGATGTGGTTG 58.009 50.000 0.87 0.00 0.00 3.77
5831 6388 0.244450 GATGTGGTTGGTGTGCATGG 59.756 55.000 0.00 0.00 0.00 3.66
5832 6389 1.818959 ATGTGGTTGGTGTGCATGGC 61.819 55.000 0.00 0.00 0.00 4.40
5850 6407 1.967779 GGCACCACAACTTAAATGGGT 59.032 47.619 0.00 0.00 37.86 4.51
5856 6413 3.058501 CCACAACTTAAATGGGTGACGAC 60.059 47.826 0.00 0.00 0.00 4.34
5857 6414 2.803956 ACAACTTAAATGGGTGACGACG 59.196 45.455 0.00 0.00 0.00 5.12
5859 6416 2.680577 ACTTAAATGGGTGACGACGAC 58.319 47.619 0.00 0.00 0.00 4.34
5862 6419 2.775032 AAATGGGTGACGACGACGGG 62.775 60.000 12.58 0.00 44.46 5.28
5863 6420 4.953010 TGGGTGACGACGACGGGA 62.953 66.667 12.58 0.00 44.46 5.14
5864 6421 4.410743 GGGTGACGACGACGGGAC 62.411 72.222 12.58 7.27 44.46 4.46
5901 6458 6.071784 TGAGTAATTGATGTTTGCAGATGCTT 60.072 34.615 6.35 0.00 42.66 3.91
5902 6459 6.097356 AGTAATTGATGTTTGCAGATGCTTG 58.903 36.000 6.35 0.00 42.66 4.01
5903 6460 4.530710 ATTGATGTTTGCAGATGCTTGT 57.469 36.364 6.35 0.00 42.66 3.16
5904 6461 3.564235 TGATGTTTGCAGATGCTTGTC 57.436 42.857 6.35 0.00 42.66 3.18
5905 6462 2.229543 TGATGTTTGCAGATGCTTGTCC 59.770 45.455 6.35 0.00 42.66 4.02
5906 6463 1.689984 TGTTTGCAGATGCTTGTCCA 58.310 45.000 6.35 0.00 42.66 4.02
5907 6464 1.610038 TGTTTGCAGATGCTTGTCCAG 59.390 47.619 6.35 0.00 42.66 3.86
5908 6465 1.881973 GTTTGCAGATGCTTGTCCAGA 59.118 47.619 6.35 0.00 42.66 3.86
5909 6466 2.490903 GTTTGCAGATGCTTGTCCAGAT 59.509 45.455 6.35 0.00 42.66 2.90
5910 6467 3.632643 TTGCAGATGCTTGTCCAGATA 57.367 42.857 6.35 0.00 42.66 1.98
5911 6468 3.851458 TGCAGATGCTTGTCCAGATAT 57.149 42.857 6.35 0.00 42.66 1.63
5912 6469 4.160642 TGCAGATGCTTGTCCAGATATT 57.839 40.909 6.35 0.00 42.66 1.28
5913 6470 5.294734 TGCAGATGCTTGTCCAGATATTA 57.705 39.130 6.35 0.00 42.66 0.98
5921 6478 5.300034 TGCTTGTCCAGATATTAAATGCCAG 59.700 40.000 0.00 0.00 0.00 4.85
5923 6480 6.514048 GCTTGTCCAGATATTAAATGCCAGAC 60.514 42.308 0.00 0.00 0.00 3.51
5943 6500 6.250819 CAGACTTTTAATACCAGCGAACATG 58.749 40.000 0.00 0.00 0.00 3.21
5952 6509 0.457509 CAGCGAACATGCTCGTCTCT 60.458 55.000 18.87 5.92 45.23 3.10
5954 6511 1.192793 GCGAACATGCTCGTCTCTAC 58.807 55.000 18.87 0.00 40.99 2.59
5955 6512 1.467543 GCGAACATGCTCGTCTCTACA 60.468 52.381 18.87 0.00 40.99 2.74
5959 6516 1.683917 ACATGCTCGTCTCTACATCCC 59.316 52.381 0.00 0.00 0.00 3.85
5960 6517 0.955178 ATGCTCGTCTCTACATCCCG 59.045 55.000 0.00 0.00 0.00 5.14
5961 6518 1.008309 GCTCGTCTCTACATCCCGC 60.008 63.158 0.00 0.00 0.00 6.13
5962 6519 1.655329 CTCGTCTCTACATCCCGCC 59.345 63.158 0.00 0.00 0.00 6.13
5964 6521 0.467474 TCGTCTCTACATCCCGCCAT 60.467 55.000 0.00 0.00 0.00 4.40
5967 6524 1.271102 GTCTCTACATCCCGCCATCTC 59.729 57.143 0.00 0.00 0.00 2.75
5970 6527 0.319728 CTACATCCCGCCATCTCCAG 59.680 60.000 0.00 0.00 0.00 3.86
5977 6534 2.892425 GCCATCTCCAGCGGTTCG 60.892 66.667 0.00 0.00 0.00 3.95
5978 6535 2.579201 CCATCTCCAGCGGTTCGT 59.421 61.111 0.00 0.00 0.00 3.85
5979 6536 1.519455 CCATCTCCAGCGGTTCGTC 60.519 63.158 0.00 0.00 0.00 4.20
5980 6537 1.519455 CATCTCCAGCGGTTCGTCC 60.519 63.158 0.00 0.00 0.00 4.79
5981 6538 2.722201 ATCTCCAGCGGTTCGTCCC 61.722 63.158 0.00 0.00 0.00 4.46
5982 6539 4.452733 CTCCAGCGGTTCGTCCCC 62.453 72.222 0.00 0.00 0.00 4.81
5985 6542 4.760047 CAGCGGTTCGTCCCCCAG 62.760 72.222 0.00 0.00 0.00 4.45
5996 6553 3.820843 CCCCCAGGGCGCCTAAAT 61.821 66.667 28.56 7.33 35.35 1.40
5997 6554 2.457323 CCCCCAGGGCGCCTAAATA 61.457 63.158 28.56 0.00 35.35 1.40
5998 6555 1.073199 CCCCAGGGCGCCTAAATAG 59.927 63.158 28.56 10.47 29.64 1.73
5999 6556 1.415672 CCCCAGGGCGCCTAAATAGA 61.416 60.000 28.56 0.00 29.64 1.98
6000 6557 0.035458 CCCAGGGCGCCTAAATAGAG 59.965 60.000 28.56 6.58 29.64 2.43
6001 6558 0.603975 CCAGGGCGCCTAAATAGAGC 60.604 60.000 28.56 5.83 29.64 4.09
6006 6563 1.367840 CGCCTAAATAGAGCGGCCT 59.632 57.895 0.00 0.00 45.88 5.19
6007 6564 0.946221 CGCCTAAATAGAGCGGCCTG 60.946 60.000 0.00 0.00 45.88 4.85
6008 6565 0.603975 GCCTAAATAGAGCGGCCTGG 60.604 60.000 0.00 0.00 36.56 4.45
6009 6566 0.035458 CCTAAATAGAGCGGCCTGGG 59.965 60.000 0.00 0.00 0.00 4.45
6010 6567 0.035458 CTAAATAGAGCGGCCTGGGG 59.965 60.000 0.00 0.00 0.00 4.96
6051 7286 3.922640 CTGGGGGCGAGCTAGCTC 61.923 72.222 31.12 31.12 39.55 4.09
6055 7290 3.922640 GGGCGAGCTAGCTCCCAG 61.923 72.222 34.28 25.07 39.77 4.45
6057 7292 2.415426 GCGAGCTAGCTCCCAGTC 59.585 66.667 33.57 16.65 39.77 3.51
6058 7293 2.418910 GCGAGCTAGCTCCCAGTCA 61.419 63.158 33.57 0.00 39.77 3.41
6060 7295 1.435515 GAGCTAGCTCCCAGTCACG 59.564 63.158 30.89 0.00 37.11 4.35
6061 7296 2.202810 GCTAGCTCCCAGTCACGC 60.203 66.667 7.70 0.00 0.00 5.34
6090 7325 3.797353 GGCCTCAGGATGCGGGAA 61.797 66.667 0.00 0.00 42.51 3.97
6091 7326 2.272146 GCCTCAGGATGCGGGAAA 59.728 61.111 0.00 0.00 42.51 3.13
6092 7327 1.152881 GCCTCAGGATGCGGGAAAT 60.153 57.895 0.00 0.00 42.51 2.17
6093 7328 0.753111 GCCTCAGGATGCGGGAAATT 60.753 55.000 0.00 0.00 42.51 1.82
6094 7329 1.312815 CCTCAGGATGCGGGAAATTC 58.687 55.000 0.00 0.00 37.31 2.17
6095 7330 1.408683 CCTCAGGATGCGGGAAATTCA 60.409 52.381 0.00 0.00 37.31 2.57
6096 7331 2.368439 CTCAGGATGCGGGAAATTCAA 58.632 47.619 0.00 0.00 34.76 2.69
6097 7332 2.754552 CTCAGGATGCGGGAAATTCAAA 59.245 45.455 0.00 0.00 34.76 2.69
6098 7333 2.491693 TCAGGATGCGGGAAATTCAAAC 59.508 45.455 0.00 0.00 34.76 2.93
6099 7334 2.493278 CAGGATGCGGGAAATTCAAACT 59.507 45.455 0.00 0.00 0.00 2.66
6100 7335 3.056607 CAGGATGCGGGAAATTCAAACTT 60.057 43.478 0.00 0.00 0.00 2.66
6101 7336 3.056607 AGGATGCGGGAAATTCAAACTTG 60.057 43.478 0.00 0.00 0.00 3.16
6102 7337 2.810439 TGCGGGAAATTCAAACTTGG 57.190 45.000 0.00 0.00 0.00 3.61
6104 7339 2.035321 TGCGGGAAATTCAAACTTGGTC 59.965 45.455 0.00 0.00 0.00 4.02
6105 7340 2.920647 GCGGGAAATTCAAACTTGGTCG 60.921 50.000 0.00 0.00 0.00 4.79
6106 7341 2.292292 CGGGAAATTCAAACTTGGTCGT 59.708 45.455 0.00 0.00 0.00 4.34
6107 7342 3.243267 CGGGAAATTCAAACTTGGTCGTT 60.243 43.478 0.00 0.00 0.00 3.85
6108 7343 4.295870 GGGAAATTCAAACTTGGTCGTTC 58.704 43.478 0.00 0.00 0.00 3.95
6109 7344 4.295870 GGAAATTCAAACTTGGTCGTTCC 58.704 43.478 0.00 0.00 0.00 3.62
6110 7345 4.295870 GAAATTCAAACTTGGTCGTTCCC 58.704 43.478 0.00 0.00 34.77 3.97
6111 7346 1.301423 TTCAAACTTGGTCGTTCCCG 58.699 50.000 0.00 0.00 34.77 5.14
6112 7347 1.161563 TCAAACTTGGTCGTTCCCGC 61.162 55.000 0.00 0.00 34.77 6.13
6115 7350 1.755393 AACTTGGTCGTTCCCGCTCT 61.755 55.000 0.00 0.00 34.77 4.09
6116 7351 1.446272 CTTGGTCGTTCCCGCTCTC 60.446 63.158 0.00 0.00 34.77 3.20
6117 7352 2.154798 CTTGGTCGTTCCCGCTCTCA 62.155 60.000 0.00 0.00 34.77 3.27
6119 7354 1.005394 GGTCGTTCCCGCTCTCAAA 60.005 57.895 0.00 0.00 0.00 2.69
6120 7355 0.601841 GGTCGTTCCCGCTCTCAAAA 60.602 55.000 0.00 0.00 0.00 2.44
6121 7356 0.790814 GTCGTTCCCGCTCTCAAAAG 59.209 55.000 0.00 0.00 0.00 2.27
6122 7357 0.677288 TCGTTCCCGCTCTCAAAAGA 59.323 50.000 0.00 0.00 0.00 2.52
6123 7358 0.790814 CGTTCCCGCTCTCAAAAGAC 59.209 55.000 0.00 0.00 0.00 3.01
6124 7359 0.790814 GTTCCCGCTCTCAAAAGACG 59.209 55.000 0.00 0.00 0.00 4.18
6126 7361 2.391389 CCCGCTCTCAAAAGACGCC 61.391 63.158 0.00 0.00 0.00 5.68
6127 7362 2.730672 CCGCTCTCAAAAGACGCCG 61.731 63.158 0.00 0.00 0.00 6.46
6129 7364 2.317609 GCTCTCAAAAGACGCCGCA 61.318 57.895 0.00 0.00 0.00 5.69
6131 7366 0.586319 CTCTCAAAAGACGCCGCAAA 59.414 50.000 0.00 0.00 0.00 3.68
6132 7367 1.197721 CTCTCAAAAGACGCCGCAAAT 59.802 47.619 0.00 0.00 0.00 2.32
6133 7368 1.196808 TCTCAAAAGACGCCGCAAATC 59.803 47.619 0.00 0.00 0.00 2.17
6134 7369 0.239879 TCAAAAGACGCCGCAAATCC 59.760 50.000 0.00 0.00 0.00 3.01
6163 7398 2.798976 ACGTAGTCTGGCGTTACAAA 57.201 45.000 0.00 0.00 29.74 2.83
6164 7399 3.096489 ACGTAGTCTGGCGTTACAAAA 57.904 42.857 0.00 0.00 29.74 2.44
6179 7414 4.025401 AAAAACAGAGCGCCGCCG 62.025 61.111 4.98 0.00 37.57 6.46
6210 7445 4.324991 GGTTCACTCGGCGGGGTT 62.325 66.667 13.20 0.00 0.00 4.11
6211 7446 3.047877 GTTCACTCGGCGGGGTTG 61.048 66.667 13.20 0.19 0.00 3.77
6212 7447 4.323477 TTCACTCGGCGGGGTTGG 62.323 66.667 13.20 0.00 0.00 3.77
6215 7450 4.324991 ACTCGGCGGGGTTGGTTC 62.325 66.667 13.20 0.00 0.00 3.62
6221 7456 2.282180 CGGGGTTGGTTCCAGGTG 60.282 66.667 0.00 0.00 0.00 4.00
6222 7457 2.931921 GGGGTTGGTTCCAGGTGT 59.068 61.111 0.00 0.00 0.00 4.16
6223 7458 1.231928 GGGGTTGGTTCCAGGTGTT 59.768 57.895 0.00 0.00 0.00 3.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 3.256383 TCTTCACAATGCCATTCCTTGTG 59.744 43.478 8.04 8.04 46.99 3.33
5 6 3.256631 GTCTTCACAATGCCATTCCTTGT 59.743 43.478 0.00 0.00 33.55 3.16
50 51 4.523173 CGTGGCTATTGACTTAGATCCCTA 59.477 45.833 0.00 0.00 0.00 3.53
78 80 5.864418 ACTACGTGCTAAATAGGATCCAA 57.136 39.130 15.82 0.00 0.00 3.53
96 98 2.084546 GGTCACCATTGGCTGAACTAC 58.915 52.381 1.54 0.00 0.00 2.73
100 102 2.079170 TTTGGTCACCATTGGCTGAA 57.921 45.000 0.00 0.00 31.53 3.02
103 105 0.609662 GCATTTGGTCACCATTGGCT 59.390 50.000 0.00 0.00 31.53 4.75
104 106 0.737019 CGCATTTGGTCACCATTGGC 60.737 55.000 0.00 0.01 31.53 4.52
107 109 1.816224 GGTACGCATTTGGTCACCATT 59.184 47.619 0.00 0.00 31.53 3.16
133 136 1.888436 CTGCCCAAGTAGCGGTGAGA 61.888 60.000 0.00 0.00 0.00 3.27
151 154 1.280421 CAGAAAGGAGCTACTTGGGCT 59.720 52.381 13.23 7.55 43.26 5.19
178 181 1.271762 GGTCTGGGGTGGTTACTTTCC 60.272 57.143 0.00 0.00 0.00 3.13
361 365 2.360483 ACAAATGTTCACGTGGATGCAA 59.640 40.909 17.00 0.00 0.00 4.08
362 366 1.952990 ACAAATGTTCACGTGGATGCA 59.047 42.857 17.00 9.92 0.00 3.96
363 367 2.704725 ACAAATGTTCACGTGGATGC 57.295 45.000 17.00 4.28 0.00 3.91
364 368 4.221926 TCAACAAATGTTCACGTGGATG 57.778 40.909 17.00 4.50 35.83 3.51
365 369 4.909696 TTCAACAAATGTTCACGTGGAT 57.090 36.364 17.00 2.69 35.83 3.41
366 370 4.909696 ATTCAACAAATGTTCACGTGGA 57.090 36.364 17.00 3.16 35.83 4.02
367 371 5.964887 AAATTCAACAAATGTTCACGTGG 57.035 34.783 17.00 0.00 35.83 4.94
368 372 7.009083 TCAGAAAATTCAACAAATGTTCACGTG 59.991 33.333 9.94 9.94 42.08 4.49
369 373 7.032580 TCAGAAAATTCAACAAATGTTCACGT 58.967 30.769 0.00 0.00 42.08 4.49
461 471 4.155099 TGATTTGAATAAATGACCGCGTGT 59.845 37.500 4.92 1.93 36.66 4.49
462 472 4.657055 TGATTTGAATAAATGACCGCGTG 58.343 39.130 4.92 0.00 36.66 5.34
506 516 9.971922 AAAATGTTTGTGAATTTTGAAAACCAA 57.028 22.222 0.00 0.00 35.27 3.67
542 552 9.703892 TTTGGAAAATCATAAAACATTCGTGAT 57.296 25.926 0.00 0.00 0.00 3.06
642 652 5.617252 TCCGTCTTTAAAACAAGTCAGGAT 58.383 37.500 0.00 0.00 0.00 3.24
643 653 5.026038 TCCGTCTTTAAAACAAGTCAGGA 57.974 39.130 0.00 0.00 0.00 3.86
644 654 5.277828 CCTTCCGTCTTTAAAACAAGTCAGG 60.278 44.000 0.00 0.00 0.00 3.86
645 655 5.526111 TCCTTCCGTCTTTAAAACAAGTCAG 59.474 40.000 0.00 0.00 0.00 3.51
646 656 5.430007 TCCTTCCGTCTTTAAAACAAGTCA 58.570 37.500 0.00 0.00 0.00 3.41
647 657 5.996669 TCCTTCCGTCTTTAAAACAAGTC 57.003 39.130 0.00 0.00 0.00 3.01
648 658 6.762702 TTTCCTTCCGTCTTTAAAACAAGT 57.237 33.333 0.00 0.00 0.00 3.16
674 685 2.234335 CGCGCGCCCTTTTGTTTTT 61.234 52.632 27.72 0.00 0.00 1.94
739 750 3.192103 AACCTCACCCTCCCAACGC 62.192 63.158 0.00 0.00 0.00 4.84
740 751 1.003718 GAACCTCACCCTCCCAACG 60.004 63.158 0.00 0.00 0.00 4.10
742 753 2.221299 CGGAACCTCACCCTCCCAA 61.221 63.158 0.00 0.00 0.00 4.12
743 754 2.606519 CGGAACCTCACCCTCCCA 60.607 66.667 0.00 0.00 0.00 4.37
744 755 1.916777 TTCGGAACCTCACCCTCCC 60.917 63.158 0.00 0.00 0.00 4.30
746 757 1.080025 CGTTCGGAACCTCACCCTC 60.080 63.158 14.83 0.00 0.00 4.30
748 759 1.080025 CTCGTTCGGAACCTCACCC 60.080 63.158 14.83 0.00 0.00 4.61
749 760 0.109226 CTCTCGTTCGGAACCTCACC 60.109 60.000 14.83 0.00 0.00 4.02
751 762 1.166129 CTCTCTCGTTCGGAACCTCA 58.834 55.000 14.83 0.00 0.00 3.86
753 764 1.166989 GTCTCTCTCGTTCGGAACCT 58.833 55.000 14.83 0.00 0.00 3.50
754 765 0.170784 GGTCTCTCTCGTTCGGAACC 59.829 60.000 14.83 0.00 0.00 3.62
755 766 0.179194 CGGTCTCTCTCGTTCGGAAC 60.179 60.000 10.83 10.83 0.00 3.62
756 767 0.321034 TCGGTCTCTCTCGTTCGGAA 60.321 55.000 0.00 0.00 0.00 4.30
757 768 1.018226 GTCGGTCTCTCTCGTTCGGA 61.018 60.000 0.00 0.00 0.00 4.55
759 770 1.296755 TGGTCGGTCTCTCTCGTTCG 61.297 60.000 0.00 0.00 0.00 3.95
761 772 0.036448 TCTGGTCGGTCTCTCTCGTT 59.964 55.000 0.00 0.00 0.00 3.85
763 774 0.673956 TGTCTGGTCGGTCTCTCTCG 60.674 60.000 0.00 0.00 0.00 4.04
765 776 0.609681 GGTGTCTGGTCGGTCTCTCT 60.610 60.000 0.00 0.00 0.00 3.10
807 855 2.892425 CGTCTTGGATGGCGAGGC 60.892 66.667 0.00 0.00 0.00 4.70
809 857 2.892425 GGCGTCTTGGATGGCGAG 60.892 66.667 0.00 0.00 34.62 5.03
858 906 2.888414 GGAGAGAGAGTATAGTGGTGGC 59.112 54.545 0.00 0.00 0.00 5.01
1337 1392 3.396570 CGGAAACCCTAGGCCGGT 61.397 66.667 15.62 0.00 40.08 5.28
1339 1394 1.069258 GATCGGAAACCCTAGGCCG 59.931 63.158 16.91 16.91 44.83 6.13
1379 1494 1.222300 CCACAAATCACCGTCGTCAA 58.778 50.000 0.00 0.00 0.00 3.18
1637 1765 1.262950 CCACAATCGAACACGAAGCAA 59.737 47.619 0.00 0.00 39.45 3.91
1694 1826 4.788925 TTCCACCACATAAATCTAGGGG 57.211 45.455 0.00 0.00 0.00 4.79
1758 1890 6.701432 ACAACCTAAGAAGTAAATCGAACG 57.299 37.500 0.00 0.00 0.00 3.95
1830 1962 5.338381 CGCATATCCCCACTACATAAATCCT 60.338 44.000 0.00 0.00 0.00 3.24
1880 2027 3.582714 AAAGGCATCAAGCTAAACAGC 57.417 42.857 0.00 0.00 44.79 4.40
1909 2057 1.006086 TACGGATGCAGCAAACATCG 58.994 50.000 3.51 0.00 43.98 3.84
1917 2066 1.429148 CGACCCTTTACGGATGCAGC 61.429 60.000 0.00 0.00 33.16 5.25
1918 2067 0.108329 ACGACCCTTTACGGATGCAG 60.108 55.000 0.00 0.00 33.16 4.41
1922 2072 1.843368 TCTCACGACCCTTTACGGAT 58.157 50.000 0.00 0.00 33.16 4.18
1923 2073 1.619654 TTCTCACGACCCTTTACGGA 58.380 50.000 0.00 0.00 33.16 4.69
1925 2075 2.985139 GTCTTTCTCACGACCCTTTACG 59.015 50.000 0.00 0.00 0.00 3.18
1926 2076 3.986277 TGTCTTTCTCACGACCCTTTAC 58.014 45.455 0.00 0.00 0.00 2.01
1927 2077 4.039973 ACATGTCTTTCTCACGACCCTTTA 59.960 41.667 0.00 0.00 0.00 1.85
1928 2078 3.181454 ACATGTCTTTCTCACGACCCTTT 60.181 43.478 0.00 0.00 0.00 3.11
1929 2079 2.368875 ACATGTCTTTCTCACGACCCTT 59.631 45.455 0.00 0.00 0.00 3.95
1930 2080 1.971357 ACATGTCTTTCTCACGACCCT 59.029 47.619 0.00 0.00 0.00 4.34
1931 2081 2.288825 TGACATGTCTTTCTCACGACCC 60.289 50.000 25.55 0.00 0.00 4.46
1932 2082 3.026630 TGACATGTCTTTCTCACGACC 57.973 47.619 25.55 0.00 0.00 4.79
1933 2083 6.700020 CAATATGACATGTCTTTCTCACGAC 58.300 40.000 25.55 0.00 0.00 4.34
1934 2084 5.291858 GCAATATGACATGTCTTTCTCACGA 59.708 40.000 25.55 3.32 0.00 4.35
1935 2085 5.496387 GCAATATGACATGTCTTTCTCACG 58.504 41.667 25.55 8.60 0.00 4.35
1936 2086 5.587844 AGGCAATATGACATGTCTTTCTCAC 59.412 40.000 25.55 11.82 0.00 3.51
1937 2087 5.748402 AGGCAATATGACATGTCTTTCTCA 58.252 37.500 25.55 6.26 0.00 3.27
1939 2089 6.893583 ACTAGGCAATATGACATGTCTTTCT 58.106 36.000 25.55 14.71 32.84 2.52
1940 2090 8.552034 GTTACTAGGCAATATGACATGTCTTTC 58.448 37.037 25.55 7.33 32.84 2.62
1941 2091 8.046708 TGTTACTAGGCAATATGACATGTCTTT 58.953 33.333 25.55 15.62 32.84 2.52
1950 2100 6.239600 GGGAGTGATGTTACTAGGCAATATGA 60.240 42.308 0.00 0.00 0.00 2.15
2024 2182 6.811170 CCACTAGAAACAGAAGAGATGAGTTC 59.189 42.308 0.00 0.00 0.00 3.01
2029 2187 6.098679 CAGTCCACTAGAAACAGAAGAGATG 58.901 44.000 0.00 0.00 0.00 2.90
2032 2190 5.461032 ACAGTCCACTAGAAACAGAAGAG 57.539 43.478 0.00 0.00 0.00 2.85
2070 2228 8.539674 GTGCTGTAAATAAACAAAGAAAACAGG 58.460 33.333 0.00 0.00 33.98 4.00
2073 2231 8.047859 CGTGTGCTGTAAATAAACAAAGAAAAC 58.952 33.333 0.00 0.00 0.00 2.43
2091 2249 6.035975 TGTTGATCTATTTCATACGTGTGCTG 59.964 38.462 7.52 0.00 0.00 4.41
2098 2256 7.042456 CCCTTGACTGTTGATCTATTTCATACG 60.042 40.741 0.00 0.00 0.00 3.06
2202 2362 6.448207 TCAATGTTGTTCAACAATGTCTGA 57.552 33.333 23.79 16.76 40.59 3.27
2250 2469 8.197439 GGCATAAAAACAGCTATAAGGACAAAT 58.803 33.333 0.00 0.00 0.00 2.32
2311 2542 3.270027 GCTGTCATGGTTAGTGTATGCA 58.730 45.455 0.00 0.00 0.00 3.96
2312 2543 2.285220 CGCTGTCATGGTTAGTGTATGC 59.715 50.000 0.00 0.00 0.00 3.14
2313 2544 2.866156 CCGCTGTCATGGTTAGTGTATG 59.134 50.000 0.00 0.00 0.00 2.39
2314 2545 2.158957 CCCGCTGTCATGGTTAGTGTAT 60.159 50.000 0.00 0.00 0.00 2.29
2315 2546 1.206132 CCCGCTGTCATGGTTAGTGTA 59.794 52.381 0.00 0.00 0.00 2.90
2316 2547 0.036388 CCCGCTGTCATGGTTAGTGT 60.036 55.000 0.00 0.00 0.00 3.55
2317 2548 0.036388 ACCCGCTGTCATGGTTAGTG 60.036 55.000 0.00 0.00 0.00 2.74
2318 2549 0.690762 AACCCGCTGTCATGGTTAGT 59.309 50.000 0.00 0.00 40.49 2.24
2326 2557 2.851263 AATTACTGAACCCGCTGTCA 57.149 45.000 0.00 0.00 0.00 3.58
2371 2602 8.905702 GTCAGAAGTAATAATTTTGTGCAAGTG 58.094 33.333 0.00 0.00 0.00 3.16
2426 2657 7.287005 ACCATGCAATCACTTCATATTCTGATT 59.713 33.333 0.00 0.00 34.37 2.57
2428 2659 6.124340 ACCATGCAATCACTTCATATTCTGA 58.876 36.000 0.00 0.00 0.00 3.27
2429 2660 6.387041 ACCATGCAATCACTTCATATTCTG 57.613 37.500 0.00 0.00 0.00 3.02
2430 2661 7.123098 TCAAACCATGCAATCACTTCATATTCT 59.877 33.333 0.00 0.00 0.00 2.40
2432 2663 7.172868 TCAAACCATGCAATCACTTCATATT 57.827 32.000 0.00 0.00 0.00 1.28
2433 2664 6.778834 TCAAACCATGCAATCACTTCATAT 57.221 33.333 0.00 0.00 0.00 1.78
2434 2665 6.778834 ATCAAACCATGCAATCACTTCATA 57.221 33.333 0.00 0.00 0.00 2.15
2435 2666 5.670792 ATCAAACCATGCAATCACTTCAT 57.329 34.783 0.00 0.00 0.00 2.57
2476 2707 2.607635 GAGAGAGTGAGAGAGCTGTACG 59.392 54.545 0.00 0.00 0.00 3.67
2477 2708 3.871594 GAGAGAGAGTGAGAGAGCTGTAC 59.128 52.174 0.00 0.00 0.00 2.90
2483 2714 3.452264 TGGAGAGAGAGAGAGTGAGAGAG 59.548 52.174 0.00 0.00 0.00 3.20
2484 2715 3.449918 TGGAGAGAGAGAGAGTGAGAGA 58.550 50.000 0.00 0.00 0.00 3.10
2485 2716 3.912496 TGGAGAGAGAGAGAGTGAGAG 57.088 52.381 0.00 0.00 0.00 3.20
2486 2717 4.649267 TTTGGAGAGAGAGAGAGTGAGA 57.351 45.455 0.00 0.00 0.00 3.27
2490 2721 4.479158 ACTGTTTTGGAGAGAGAGAGAGT 58.521 43.478 0.00 0.00 0.00 3.24
2577 2830 6.088016 GCTAATGGCATATTGTCCAATTCA 57.912 37.500 0.00 0.00 41.35 2.57
2613 2866 4.212716 ACATCAATTGCAGACATAGCCAT 58.787 39.130 0.00 0.00 0.00 4.40
2795 3048 2.158769 TCTTCTCACTTTTCCAGCAGCA 60.159 45.455 0.00 0.00 0.00 4.41
2850 3104 5.435291 AGAATGAGTTTATGAGAGCCAAGG 58.565 41.667 0.00 0.00 0.00 3.61
2898 3152 7.688343 TGATCAATCTAGCTCTCTCTATCTCA 58.312 38.462 0.00 0.00 0.00 3.27
3216 3480 4.644498 TGAATGCAATCTTCTCTGTGACA 58.356 39.130 2.94 0.00 0.00 3.58
3255 3520 3.414700 CGAACCTGCAGCCACGAC 61.415 66.667 8.66 0.00 0.00 4.34
3381 3647 4.452455 GCTTCCTGAACCATATTATCACCG 59.548 45.833 0.00 0.00 0.00 4.94
3523 3792 0.388294 GTATTTCCGGACGGAGGGAG 59.612 60.000 13.64 0.00 46.06 4.30
3525 3794 0.828677 AAGTATTTCCGGACGGAGGG 59.171 55.000 13.64 0.00 46.06 4.30
3526 3795 1.206371 ACAAGTATTTCCGGACGGAGG 59.794 52.381 13.64 0.00 46.06 4.30
3527 3796 2.537401 GACAAGTATTTCCGGACGGAG 58.463 52.381 13.64 3.15 46.06 4.63
3528 3797 1.135315 CGACAAGTATTTCCGGACGGA 60.135 52.381 1.83 9.76 43.52 4.69
3529 3798 1.274596 CGACAAGTATTTCCGGACGG 58.725 55.000 1.83 3.96 0.00 4.79
3530 3799 1.135315 TCCGACAAGTATTTCCGGACG 60.135 52.381 1.83 0.00 43.47 4.79
3531 3800 2.165030 TCTCCGACAAGTATTTCCGGAC 59.835 50.000 1.83 0.00 43.47 4.79
3532 3801 2.449464 TCTCCGACAAGTATTTCCGGA 58.551 47.619 0.00 0.00 45.74 5.14
3533 3802 2.953466 TCTCCGACAAGTATTTCCGG 57.047 50.000 0.00 0.00 41.36 5.14
3534 3803 4.494199 GCATTTCTCCGACAAGTATTTCCG 60.494 45.833 0.00 0.00 0.00 4.30
3535 3804 4.394920 TGCATTTCTCCGACAAGTATTTCC 59.605 41.667 0.00 0.00 0.00 3.13
3536 3805 5.545658 TGCATTTCTCCGACAAGTATTTC 57.454 39.130 0.00 0.00 0.00 2.17
3537 3806 7.624360 TTATGCATTTCTCCGACAAGTATTT 57.376 32.000 3.54 0.00 0.00 1.40
3538 3807 7.624360 TTTATGCATTTCTCCGACAAGTATT 57.376 32.000 3.54 0.00 0.00 1.89
3539 3808 7.624360 TTTTATGCATTTCTCCGACAAGTAT 57.376 32.000 3.54 0.00 0.00 2.12
3540 3809 7.302524 GTTTTTATGCATTTCTCCGACAAGTA 58.697 34.615 3.54 0.00 0.00 2.24
3541 3810 5.957842 TTTTATGCATTTCTCCGACAAGT 57.042 34.783 3.54 0.00 0.00 3.16
3542 3811 5.283717 CGTTTTTATGCATTTCTCCGACAAG 59.716 40.000 3.54 0.00 0.00 3.16
3543 3812 5.150683 CGTTTTTATGCATTTCTCCGACAA 58.849 37.500 3.54 0.00 0.00 3.18
3544 3813 4.378978 CCGTTTTTATGCATTTCTCCGACA 60.379 41.667 3.54 0.00 0.00 4.35
3545 3814 4.095610 CCGTTTTTATGCATTTCTCCGAC 58.904 43.478 3.54 0.00 0.00 4.79
3546 3815 4.004314 TCCGTTTTTATGCATTTCTCCGA 58.996 39.130 3.54 0.00 0.00 4.55
3547 3816 4.349663 TCCGTTTTTATGCATTTCTCCG 57.650 40.909 3.54 2.58 0.00 4.63
3548 3817 5.650543 ACATCCGTTTTTATGCATTTCTCC 58.349 37.500 3.54 0.00 0.00 3.71
3549 3818 8.345565 AGATACATCCGTTTTTATGCATTTCTC 58.654 33.333 3.54 0.00 0.00 2.87
3550 3819 8.225603 AGATACATCCGTTTTTATGCATTTCT 57.774 30.769 3.54 0.00 0.00 2.52
3551 3820 8.856490 AAGATACATCCGTTTTTATGCATTTC 57.144 30.769 3.54 0.00 0.00 2.17
3554 3823 9.730420 GTTTAAGATACATCCGTTTTTATGCAT 57.270 29.630 3.79 3.79 0.00 3.96
3555 3824 8.952278 AGTTTAAGATACATCCGTTTTTATGCA 58.048 29.630 0.00 0.00 0.00 3.96
3564 3833 9.807649 ACGTATTTTAGTTTAAGATACATCCGT 57.192 29.630 0.00 0.00 36.22 4.69
3584 3853 9.702253 AGAGGAATGGATGTATCTATACGTATT 57.298 33.333 14.33 0.00 36.06 1.89
3585 3854 9.126151 CAGAGGAATGGATGTATCTATACGTAT 57.874 37.037 13.54 13.54 36.06 3.06
3586 3855 8.326529 TCAGAGGAATGGATGTATCTATACGTA 58.673 37.037 0.00 0.00 36.06 3.57
3587 3856 7.121463 GTCAGAGGAATGGATGTATCTATACGT 59.879 40.741 0.00 0.00 36.06 3.57
3588 3857 7.121315 TGTCAGAGGAATGGATGTATCTATACG 59.879 40.741 0.00 0.00 36.06 3.06
3589 3858 8.354711 TGTCAGAGGAATGGATGTATCTATAC 57.645 38.462 0.00 0.00 0.00 1.47
3590 3859 8.956446 TTGTCAGAGGAATGGATGTATCTATA 57.044 34.615 0.00 0.00 0.00 1.31
3591 3860 7.512058 ACTTGTCAGAGGAATGGATGTATCTAT 59.488 37.037 0.00 0.00 0.00 1.98
3592 3861 6.841229 ACTTGTCAGAGGAATGGATGTATCTA 59.159 38.462 0.00 0.00 0.00 1.98
3593 3862 5.664908 ACTTGTCAGAGGAATGGATGTATCT 59.335 40.000 0.00 0.00 0.00 1.98
3594 3863 5.923204 ACTTGTCAGAGGAATGGATGTATC 58.077 41.667 0.00 0.00 0.00 2.24
3595 3864 5.965033 ACTTGTCAGAGGAATGGATGTAT 57.035 39.130 0.00 0.00 0.00 2.29
3596 3865 7.437713 AATACTTGTCAGAGGAATGGATGTA 57.562 36.000 0.00 0.00 0.00 2.29
3597 3866 5.965033 ATACTTGTCAGAGGAATGGATGT 57.035 39.130 0.00 0.00 0.00 3.06
3598 3867 6.261826 GGAAATACTTGTCAGAGGAATGGATG 59.738 42.308 0.00 0.00 0.00 3.51
3599 3868 6.360618 GGAAATACTTGTCAGAGGAATGGAT 58.639 40.000 0.00 0.00 0.00 3.41
3600 3869 5.626809 CGGAAATACTTGTCAGAGGAATGGA 60.627 44.000 0.00 0.00 0.00 3.41
3601 3870 4.572389 CGGAAATACTTGTCAGAGGAATGG 59.428 45.833 0.00 0.00 0.00 3.16
3602 3871 4.572389 CCGGAAATACTTGTCAGAGGAATG 59.428 45.833 0.00 0.00 0.00 2.67
3603 3872 4.469945 TCCGGAAATACTTGTCAGAGGAAT 59.530 41.667 0.00 0.00 0.00 3.01
3604 3873 3.835978 TCCGGAAATACTTGTCAGAGGAA 59.164 43.478 0.00 0.00 0.00 3.36
3605 3874 3.194968 GTCCGGAAATACTTGTCAGAGGA 59.805 47.826 5.23 0.00 0.00 3.71
3606 3875 3.522553 GTCCGGAAATACTTGTCAGAGG 58.477 50.000 5.23 0.00 0.00 3.69
3607 3876 3.179830 CGTCCGGAAATACTTGTCAGAG 58.820 50.000 5.23 0.00 0.00 3.35
3608 3877 2.094390 CCGTCCGGAAATACTTGTCAGA 60.094 50.000 5.23 0.00 37.50 3.27
3609 3878 2.094390 TCCGTCCGGAAATACTTGTCAG 60.094 50.000 5.23 0.00 42.05 3.51
3610 3879 1.894466 TCCGTCCGGAAATACTTGTCA 59.106 47.619 5.23 0.00 42.05 3.58
3611 3880 2.537401 CTCCGTCCGGAAATACTTGTC 58.463 52.381 5.23 0.00 44.66 3.18
3612 3881 1.206371 CCTCCGTCCGGAAATACTTGT 59.794 52.381 5.23 0.00 44.66 3.16
3613 3882 1.472728 CCCTCCGTCCGGAAATACTTG 60.473 57.143 5.23 0.00 44.66 3.16
3614 3883 0.828677 CCCTCCGTCCGGAAATACTT 59.171 55.000 5.23 0.00 44.66 2.24
3615 3884 0.032813 TCCCTCCGTCCGGAAATACT 60.033 55.000 5.23 0.00 44.66 2.12
3616 3885 0.388294 CTCCCTCCGTCCGGAAATAC 59.612 60.000 5.23 0.00 44.66 1.89
3617 3886 0.032813 ACTCCCTCCGTCCGGAAATA 60.033 55.000 5.23 0.00 44.66 1.40
3618 3887 0.032813 TACTCCCTCCGTCCGGAAAT 60.033 55.000 5.23 0.00 44.66 2.17
3619 3888 0.251742 TTACTCCCTCCGTCCGGAAA 60.252 55.000 5.23 0.00 44.66 3.13
3620 3889 0.032813 ATTACTCCCTCCGTCCGGAA 60.033 55.000 5.23 0.00 44.66 4.30
3621 3890 0.846015 TATTACTCCCTCCGTCCGGA 59.154 55.000 0.00 0.00 42.90 5.14
3622 3891 1.544691 CATATTACTCCCTCCGTCCGG 59.455 57.143 0.00 0.00 0.00 5.14
3623 3892 2.236766 ACATATTACTCCCTCCGTCCG 58.763 52.381 0.00 0.00 0.00 4.79
3624 3893 4.405548 AGTACATATTACTCCCTCCGTCC 58.594 47.826 0.00 0.00 0.00 4.79
3625 3894 5.625921 GAGTACATATTACTCCCTCCGTC 57.374 47.826 11.18 0.00 38.33 4.79
3633 3902 7.285858 AGTGAACAGAGGGAGTACATATTACTC 59.714 40.741 12.79 12.79 42.28 2.59
3634 3903 7.126733 AGTGAACAGAGGGAGTACATATTACT 58.873 38.462 0.00 0.00 0.00 2.24
3635 3904 7.349412 AGTGAACAGAGGGAGTACATATTAC 57.651 40.000 0.00 0.00 0.00 1.89
3636 3905 7.973048 AAGTGAACAGAGGGAGTACATATTA 57.027 36.000 0.00 0.00 0.00 0.98
3637 3906 6.875972 AAGTGAACAGAGGGAGTACATATT 57.124 37.500 0.00 0.00 0.00 1.28
3638 3907 6.875972 AAAGTGAACAGAGGGAGTACATAT 57.124 37.500 0.00 0.00 0.00 1.78
3639 3908 6.042781 ACAAAAGTGAACAGAGGGAGTACATA 59.957 38.462 0.00 0.00 0.00 2.29
3640 3909 5.163195 ACAAAAGTGAACAGAGGGAGTACAT 60.163 40.000 0.00 0.00 0.00 2.29
3641 3910 4.163458 ACAAAAGTGAACAGAGGGAGTACA 59.837 41.667 0.00 0.00 0.00 2.90
3642 3911 4.704965 ACAAAAGTGAACAGAGGGAGTAC 58.295 43.478 0.00 0.00 0.00 2.73
3643 3912 6.325545 TCTTACAAAAGTGAACAGAGGGAGTA 59.674 38.462 0.00 0.00 34.13 2.59
3644 3913 3.933861 ACAAAAGTGAACAGAGGGAGT 57.066 42.857 0.00 0.00 0.00 3.85
3645 3914 5.467063 GTCTTACAAAAGTGAACAGAGGGAG 59.533 44.000 0.00 0.00 34.13 4.30
3646 3915 5.365619 GTCTTACAAAAGTGAACAGAGGGA 58.634 41.667 0.00 0.00 34.13 4.20
3647 3916 4.211374 CGTCTTACAAAAGTGAACAGAGGG 59.789 45.833 0.00 0.00 34.13 4.30
3648 3917 4.318831 GCGTCTTACAAAAGTGAACAGAGG 60.319 45.833 0.00 0.00 34.13 3.69
3649 3918 4.508124 AGCGTCTTACAAAAGTGAACAGAG 59.492 41.667 0.00 0.00 34.13 3.35
3650 3919 4.270084 CAGCGTCTTACAAAAGTGAACAGA 59.730 41.667 0.00 0.00 34.13 3.41
3651 3920 4.034048 ACAGCGTCTTACAAAAGTGAACAG 59.966 41.667 0.00 0.00 34.13 3.16
3652 3921 3.936453 ACAGCGTCTTACAAAAGTGAACA 59.064 39.130 0.00 0.00 34.13 3.18
3653 3922 4.531659 ACAGCGTCTTACAAAAGTGAAC 57.468 40.909 0.00 0.00 34.13 3.18
3654 3923 4.210537 GCTACAGCGTCTTACAAAAGTGAA 59.789 41.667 0.00 0.00 34.13 3.18
3655 3924 3.739300 GCTACAGCGTCTTACAAAAGTGA 59.261 43.478 0.00 0.00 34.13 3.41
3656 3925 3.120649 GGCTACAGCGTCTTACAAAAGTG 60.121 47.826 0.00 0.00 43.26 3.16
3657 3926 3.064931 GGCTACAGCGTCTTACAAAAGT 58.935 45.455 0.00 0.00 43.26 2.66
3658 3927 3.064207 TGGCTACAGCGTCTTACAAAAG 58.936 45.455 0.00 0.00 43.26 2.27
3659 3928 3.114668 TGGCTACAGCGTCTTACAAAA 57.885 42.857 0.00 0.00 43.26 2.44
3660 3929 2.823924 TGGCTACAGCGTCTTACAAA 57.176 45.000 0.00 0.00 43.26 2.83
3661 3930 3.328382 AATGGCTACAGCGTCTTACAA 57.672 42.857 0.00 0.00 43.26 2.41
3662 3931 3.259064 GAAATGGCTACAGCGTCTTACA 58.741 45.455 0.00 0.00 43.26 2.41
3663 3932 3.259064 TGAAATGGCTACAGCGTCTTAC 58.741 45.455 0.00 0.00 43.26 2.34
3664 3933 3.194755 TCTGAAATGGCTACAGCGTCTTA 59.805 43.478 0.00 0.00 43.26 2.10
3665 3934 2.028112 TCTGAAATGGCTACAGCGTCTT 60.028 45.455 0.00 0.00 43.26 3.01
3666 3935 1.550524 TCTGAAATGGCTACAGCGTCT 59.449 47.619 0.00 0.00 43.26 4.18
3667 3936 1.661112 GTCTGAAATGGCTACAGCGTC 59.339 52.381 0.00 0.00 43.26 5.19
3668 3937 1.001974 TGTCTGAAATGGCTACAGCGT 59.998 47.619 0.00 0.00 43.26 5.07
3669 3938 1.662629 CTGTCTGAAATGGCTACAGCG 59.337 52.381 0.00 0.00 43.26 5.18
3671 3940 2.676839 CTGCTGTCTGAAATGGCTACAG 59.323 50.000 0.00 0.00 40.38 2.74
3672 3941 2.038952 ACTGCTGTCTGAAATGGCTACA 59.961 45.455 0.00 0.00 0.00 2.74
3673 3942 2.417933 CACTGCTGTCTGAAATGGCTAC 59.582 50.000 0.00 0.00 0.00 3.58
3674 3943 2.302733 TCACTGCTGTCTGAAATGGCTA 59.697 45.455 0.00 0.00 0.00 3.93
3675 3944 1.072806 TCACTGCTGTCTGAAATGGCT 59.927 47.619 0.00 0.00 0.00 4.75
3676 3945 1.527034 TCACTGCTGTCTGAAATGGC 58.473 50.000 0.00 0.00 0.00 4.40
3677 3946 4.202040 TGTTTTCACTGCTGTCTGAAATGG 60.202 41.667 9.26 0.00 36.51 3.16
3678 3947 4.923893 TGTTTTCACTGCTGTCTGAAATG 58.076 39.130 9.26 0.00 36.51 2.32
3679 3948 4.641989 ACTGTTTTCACTGCTGTCTGAAAT 59.358 37.500 9.26 0.00 36.51 2.17
3680 3949 4.009675 ACTGTTTTCACTGCTGTCTGAAA 58.990 39.130 5.59 5.59 35.14 2.69
3681 3950 3.609853 ACTGTTTTCACTGCTGTCTGAA 58.390 40.909 0.00 0.00 0.00 3.02
3682 3951 3.266510 ACTGTTTTCACTGCTGTCTGA 57.733 42.857 0.00 0.00 0.00 3.27
3683 3952 3.374988 TGAACTGTTTTCACTGCTGTCTG 59.625 43.478 0.00 0.00 0.00 3.51
3684 3953 3.609853 TGAACTGTTTTCACTGCTGTCT 58.390 40.909 0.00 0.00 0.00 3.41
3685 3954 4.355543 TTGAACTGTTTTCACTGCTGTC 57.644 40.909 0.00 0.00 0.00 3.51
3686 3955 4.158394 ACATTGAACTGTTTTCACTGCTGT 59.842 37.500 0.00 0.00 33.91 4.40
3687 3956 4.675510 ACATTGAACTGTTTTCACTGCTG 58.324 39.130 0.00 0.00 33.91 4.41
3688 3957 4.641989 AGACATTGAACTGTTTTCACTGCT 59.358 37.500 0.00 1.79 33.91 4.24
3689 3958 4.736793 CAGACATTGAACTGTTTTCACTGC 59.263 41.667 0.00 0.00 33.91 4.40
3690 3959 4.736793 GCAGACATTGAACTGTTTTCACTG 59.263 41.667 13.56 3.56 35.86 3.66
3691 3960 4.641989 AGCAGACATTGAACTGTTTTCACT 59.358 37.500 13.56 0.00 36.62 3.41
3692 3961 4.736793 CAGCAGACATTGAACTGTTTTCAC 59.263 41.667 13.56 0.00 36.62 3.18
3693 3962 4.398988 ACAGCAGACATTGAACTGTTTTCA 59.601 37.500 13.56 0.00 38.38 2.69
3694 3963 4.925068 ACAGCAGACATTGAACTGTTTTC 58.075 39.130 13.56 0.00 38.38 2.29
3695 3964 4.641989 AGACAGCAGACATTGAACTGTTTT 59.358 37.500 13.56 4.95 41.45 2.43
3696 3965 4.036027 CAGACAGCAGACATTGAACTGTTT 59.964 41.667 13.56 0.00 41.45 2.83
3697 3966 3.562973 CAGACAGCAGACATTGAACTGTT 59.437 43.478 13.56 0.00 41.45 3.16
3698 3967 3.136763 CAGACAGCAGACATTGAACTGT 58.863 45.455 13.56 0.00 43.93 3.55
3699 3968 3.396560 TCAGACAGCAGACATTGAACTG 58.603 45.455 9.81 9.81 37.22 3.16
3700 3969 3.758755 TCAGACAGCAGACATTGAACT 57.241 42.857 0.00 0.00 0.00 3.01
3701 3970 4.531332 GTTTCAGACAGCAGACATTGAAC 58.469 43.478 0.00 0.00 0.00 3.18
3702 3971 3.248363 CGTTTCAGACAGCAGACATTGAA 59.752 43.478 0.00 0.00 0.00 2.69
3703 3972 2.802247 CGTTTCAGACAGCAGACATTGA 59.198 45.455 0.00 0.00 0.00 2.57
3704 3973 2.545526 ACGTTTCAGACAGCAGACATTG 59.454 45.455 0.00 0.00 0.00 2.82
3705 3974 2.802816 GACGTTTCAGACAGCAGACATT 59.197 45.455 0.00 0.00 0.00 2.71
3706 3975 2.036475 AGACGTTTCAGACAGCAGACAT 59.964 45.455 0.00 0.00 0.00 3.06
3707 3976 1.409064 AGACGTTTCAGACAGCAGACA 59.591 47.619 0.00 0.00 0.00 3.41
3708 3977 2.141535 AGACGTTTCAGACAGCAGAC 57.858 50.000 0.00 0.00 0.00 3.51
3709 3978 2.890808 AAGACGTTTCAGACAGCAGA 57.109 45.000 0.00 0.00 0.00 4.26
3710 3979 6.706055 TTTATAAGACGTTTCAGACAGCAG 57.294 37.500 0.00 0.00 0.00 4.24
3711 3980 7.485418 TTTTTATAAGACGTTTCAGACAGCA 57.515 32.000 0.00 0.00 0.00 4.41
3712 3981 8.950403 AATTTTTATAAGACGTTTCAGACAGC 57.050 30.769 0.00 0.00 0.00 4.40
3719 3988 9.481800 CCTCCGTTAATTTTTATAAGACGTTTC 57.518 33.333 0.00 0.00 0.00 2.78
3720 3989 8.453320 CCCTCCGTTAATTTTTATAAGACGTTT 58.547 33.333 0.00 0.00 0.00 3.60
3721 3990 7.823799 TCCCTCCGTTAATTTTTATAAGACGTT 59.176 33.333 0.00 0.00 0.00 3.99
3722 3991 7.330262 TCCCTCCGTTAATTTTTATAAGACGT 58.670 34.615 0.00 0.00 0.00 4.34
3723 3992 7.493645 ACTCCCTCCGTTAATTTTTATAAGACG 59.506 37.037 0.00 0.00 0.00 4.18
3724 3993 8.728337 ACTCCCTCCGTTAATTTTTATAAGAC 57.272 34.615 0.00 0.00 0.00 3.01
3731 4000 9.524496 AACTTAATACTCCCTCCGTTAATTTTT 57.476 29.630 0.00 0.00 0.00 1.94
3735 4004 9.774413 CAATAACTTAATACTCCCTCCGTTAAT 57.226 33.333 0.00 0.00 0.00 1.40
3736 4005 7.712205 GCAATAACTTAATACTCCCTCCGTTAA 59.288 37.037 0.00 0.00 0.00 2.01
3737 4006 7.147689 TGCAATAACTTAATACTCCCTCCGTTA 60.148 37.037 0.00 0.00 0.00 3.18
3738 4007 6.053650 GCAATAACTTAATACTCCCTCCGTT 58.946 40.000 0.00 0.00 0.00 4.44
3739 4008 5.129815 TGCAATAACTTAATACTCCCTCCGT 59.870 40.000 0.00 0.00 0.00 4.69
3740 4009 5.607477 TGCAATAACTTAATACTCCCTCCG 58.393 41.667 0.00 0.00 0.00 4.63
3741 4010 7.054751 AGTTGCAATAACTTAATACTCCCTCC 58.945 38.462 0.59 0.00 0.00 4.30
3742 4011 8.507524 AAGTTGCAATAACTTAATACTCCCTC 57.492 34.615 0.59 0.00 38.58 4.30
3743 4012 8.879427 AAAGTTGCAATAACTTAATACTCCCT 57.121 30.769 0.59 0.00 39.36 4.20
3744 4013 9.923143 AAAAAGTTGCAATAACTTAATACTCCC 57.077 29.630 0.59 0.00 39.36 4.30
3835 4108 5.356751 TGATTGTCCAGGCATACATTAACAC 59.643 40.000 0.00 0.00 0.00 3.32
4000 4273 4.003648 CACAACTTTAGCCCCTAAGTCAG 58.996 47.826 0.00 0.00 0.00 3.51
4003 4276 4.104261 ACTTCACAACTTTAGCCCCTAAGT 59.896 41.667 0.00 0.00 0.00 2.24
4004 4277 4.652822 ACTTCACAACTTTAGCCCCTAAG 58.347 43.478 0.00 0.00 0.00 2.18
4507 4847 5.858475 CACGTCTGGTGTAAATCAGAAATC 58.142 41.667 0.00 0.00 41.07 2.17
4524 4864 1.831736 AGCATTAGGTAAGGCACGTCT 59.168 47.619 8.90 0.00 44.61 4.18
4528 4868 3.268023 AGTGAGCATTAGGTAAGGCAC 57.732 47.619 8.90 3.39 44.61 5.01
4554 4900 6.220930 TCAGTAGTAATCTGTTTCCACACAC 58.779 40.000 0.00 0.00 34.86 3.82
4682 5028 1.167851 TCAAATCCTCCGCAGCTTTG 58.832 50.000 0.00 0.00 0.00 2.77
4792 5138 0.615331 TCTGGACAGAGCATGAACCC 59.385 55.000 0.00 0.00 32.82 4.11
4903 5249 6.354130 TGAAAACAAGGTAGCTAACTGAAGT 58.646 36.000 13.22 8.95 0.00 3.01
4910 5256 9.174166 GAGGATTAATGAAAACAAGGTAGCTAA 57.826 33.333 0.00 0.00 0.00 3.09
5115 5471 2.338984 GACGCCCACGAGTTGAGT 59.661 61.111 0.00 0.00 43.93 3.41
5241 5602 2.173356 CCTAGACAAGGCCATTCATCCA 59.827 50.000 5.01 0.00 38.97 3.41
5242 5603 2.856222 CCTAGACAAGGCCATTCATCC 58.144 52.381 5.01 0.00 38.97 3.51
5258 5619 3.940221 AGTCTACTACGCACAGAACCTAG 59.060 47.826 0.00 0.00 0.00 3.02
5265 5628 4.127907 TCCATAGAGTCTACTACGCACAG 58.872 47.826 0.85 0.00 0.00 3.66
5281 5644 8.583296 TGATAGTGTGAAATCAGAGATCCATAG 58.417 37.037 0.00 0.00 0.00 2.23
5283 5646 7.070946 AGTGATAGTGTGAAATCAGAGATCCAT 59.929 37.037 0.00 0.00 32.93 3.41
5285 5648 6.700960 CAGTGATAGTGTGAAATCAGAGATCC 59.299 42.308 0.00 0.00 32.93 3.36
5286 5649 6.700960 CCAGTGATAGTGTGAAATCAGAGATC 59.299 42.308 0.00 0.00 32.93 2.75
5287 5650 6.382282 TCCAGTGATAGTGTGAAATCAGAGAT 59.618 38.462 0.00 0.00 32.93 2.75
5288 5651 5.716703 TCCAGTGATAGTGTGAAATCAGAGA 59.283 40.000 0.00 0.00 32.93 3.10
5289 5652 5.970592 TCCAGTGATAGTGTGAAATCAGAG 58.029 41.667 0.00 0.00 32.93 3.35
5304 5667 8.986991 AGAGAATAGTTTTACTCATCCAGTGAT 58.013 33.333 0.00 0.00 36.43 3.06
5311 5674 8.709386 TTGAGCAGAGAATAGTTTTACTCATC 57.291 34.615 0.00 0.00 32.21 2.92
5313 5676 7.600375 CACTTGAGCAGAGAATAGTTTTACTCA 59.400 37.037 0.00 0.00 32.59 3.41
5315 5678 7.671302 TCACTTGAGCAGAGAATAGTTTTACT 58.329 34.615 0.00 0.00 0.00 2.24
5337 5702 2.551270 CAAACAGGCGACGCTCAC 59.449 61.111 20.77 2.78 0.00 3.51
5343 5708 1.007387 CCCAAAGCAAACAGGCGAC 60.007 57.895 0.00 0.00 39.27 5.19
5446 5848 3.119919 GCAAGAGCAGAGACCAAAGAATG 60.120 47.826 0.00 0.00 41.58 2.67
5488 5890 0.543749 ACTGGGCCTAAGCACTGATC 59.456 55.000 4.53 0.00 45.43 2.92
5492 5894 1.003696 GAGAAACTGGGCCTAAGCACT 59.996 52.381 4.53 1.64 45.43 4.40
5494 5896 1.064003 TGAGAAACTGGGCCTAAGCA 58.936 50.000 4.53 0.00 42.56 3.91
5497 5899 4.591321 ATCATTGAGAAACTGGGCCTAA 57.409 40.909 4.53 0.00 0.00 2.69
5501 5903 3.056322 AGCAAATCATTGAGAAACTGGGC 60.056 43.478 0.00 0.00 38.94 5.36
5567 5969 0.322648 GCAAAAATCTGCAAGGGCCT 59.677 50.000 0.00 0.00 42.17 5.19
5568 5970 0.322648 AGCAAAAATCTGCAAGGGCC 59.677 50.000 0.00 0.00 45.18 5.80
5578 5980 4.986659 ACATGAACAGAGCAAGCAAAAATC 59.013 37.500 0.00 0.00 0.00 2.17
5585 5987 2.932614 ACGATACATGAACAGAGCAAGC 59.067 45.455 0.00 0.00 0.00 4.01
5603 6005 5.008619 TCCCATACGCTTTATGTAAACGA 57.991 39.130 0.00 0.00 0.00 3.85
5604 6006 4.210537 CCTCCCATACGCTTTATGTAAACG 59.789 45.833 2.54 0.00 0.00 3.60
5613 6015 2.679930 GCTTACACCTCCCATACGCTTT 60.680 50.000 0.00 0.00 0.00 3.51
5614 6016 1.134491 GCTTACACCTCCCATACGCTT 60.134 52.381 0.00 0.00 0.00 4.68
5616 6018 0.532196 GGCTTACACCTCCCATACGC 60.532 60.000 0.00 0.00 0.00 4.42
5617 6019 0.106149 GGGCTTACACCTCCCATACG 59.894 60.000 0.00 0.00 39.82 3.06
5619 6021 0.325860 ACGGGCTTACACCTCCCATA 60.326 55.000 0.00 0.00 40.05 2.74
5620 6022 0.325860 TACGGGCTTACACCTCCCAT 60.326 55.000 0.00 0.00 40.05 4.00
5627 6147 2.162809 CCAAATGGTTACGGGCTTACAC 59.837 50.000 0.00 0.00 0.00 2.90
5637 6157 2.171003 AGCAGAAGGCCAAATGGTTAC 58.829 47.619 5.01 0.00 46.50 2.50
5664 6184 1.758936 TCCTCCTGCAATGCAATGAG 58.241 50.000 20.87 20.87 38.41 2.90
5704 6224 1.811359 ACGGACAAAACGGAAAACACA 59.189 42.857 0.00 0.00 35.23 3.72
5705 6225 2.178783 CACGGACAAAACGGAAAACAC 58.821 47.619 0.00 0.00 35.23 3.32
5706 6226 1.467713 GCACGGACAAAACGGAAAACA 60.468 47.619 0.00 0.00 35.23 2.83
5707 6227 1.193644 GCACGGACAAAACGGAAAAC 58.806 50.000 0.00 0.00 35.23 2.43
5708 6228 0.100861 GGCACGGACAAAACGGAAAA 59.899 50.000 0.00 0.00 35.23 2.29
5726 6258 2.906897 AGCAGCCACCAACAACGG 60.907 61.111 0.00 0.00 0.00 4.44
5728 6260 0.536006 AGAGAGCAGCCACCAACAAC 60.536 55.000 0.00 0.00 0.00 3.32
5735 6267 2.358003 ACGCAAGAGAGCAGCCAC 60.358 61.111 0.00 0.00 43.62 5.01
5737 6269 0.670546 TTACACGCAAGAGAGCAGCC 60.671 55.000 0.00 0.00 43.62 4.85
5738 6270 1.148310 TTTACACGCAAGAGAGCAGC 58.852 50.000 0.00 0.00 43.62 5.25
5740 6272 3.920446 TGTATTTACACGCAAGAGAGCA 58.080 40.909 0.00 0.00 43.62 4.26
5741 6273 3.927142 ACTGTATTTACACGCAAGAGAGC 59.073 43.478 0.00 0.00 43.62 4.09
5744 6276 6.090783 TCAGTACTGTATTTACACGCAAGAG 58.909 40.000 21.99 0.00 43.62 2.85
5745 6277 6.016213 TCAGTACTGTATTTACACGCAAGA 57.984 37.500 21.99 0.00 43.62 3.02
5748 6280 4.171005 GCTCAGTACTGTATTTACACGCA 58.829 43.478 21.99 0.00 31.93 5.24
5750 6282 3.789756 CGGCTCAGTACTGTATTTACACG 59.210 47.826 21.99 12.24 31.93 4.49
5751 6283 4.741342 ACGGCTCAGTACTGTATTTACAC 58.259 43.478 21.99 5.20 31.93 2.90
5752 6284 6.704289 ATACGGCTCAGTACTGTATTTACA 57.296 37.500 21.99 0.38 36.42 2.41
5753 6285 8.092521 TCTATACGGCTCAGTACTGTATTTAC 57.907 38.462 21.99 7.52 39.66 2.01
5754 6286 8.859236 ATCTATACGGCTCAGTACTGTATTTA 57.141 34.615 21.99 9.07 39.66 1.40
5756 6288 8.894731 CATATCTATACGGCTCAGTACTGTATT 58.105 37.037 21.99 6.61 39.66 1.89
5757 6289 7.499563 CCATATCTATACGGCTCAGTACTGTAT 59.500 40.741 21.99 13.96 41.40 2.29
5759 6291 5.648526 CCATATCTATACGGCTCAGTACTGT 59.351 44.000 21.99 5.49 0.00 3.55
5760 6292 5.880887 TCCATATCTATACGGCTCAGTACTG 59.119 44.000 17.17 17.17 0.00 2.74
5761 6293 5.881443 GTCCATATCTATACGGCTCAGTACT 59.119 44.000 0.00 0.00 0.00 2.73
5762 6294 5.066246 GGTCCATATCTATACGGCTCAGTAC 59.934 48.000 0.00 0.00 0.00 2.73
5802 6359 1.403647 CCAACCACATCTGCAAGCATG 60.404 52.381 0.00 0.00 0.00 4.06
5804 6361 0.467844 ACCAACCACATCTGCAAGCA 60.468 50.000 0.00 0.00 0.00 3.91
5806 6363 1.001048 CACACCAACCACATCTGCAAG 60.001 52.381 0.00 0.00 0.00 4.01
5831 6388 2.625790 TCACCCATTTAAGTTGTGGTGC 59.374 45.455 15.57 0.00 42.29 5.01
5832 6389 3.304391 CGTCACCCATTTAAGTTGTGGTG 60.304 47.826 14.88 14.88 43.57 4.17
5850 6407 4.986645 TCCGTCCCGTCGTCGTCA 62.987 66.667 0.71 0.00 35.01 4.35
5856 6413 4.802051 TACCCCTCCGTCCCGTCG 62.802 72.222 0.00 0.00 0.00 5.12
5857 6414 1.332889 ATTTACCCCTCCGTCCCGTC 61.333 60.000 0.00 0.00 0.00 4.79
5859 6416 1.145377 CATTTACCCCTCCGTCCCG 59.855 63.158 0.00 0.00 0.00 5.14
5862 6419 4.684484 ATTACTCATTTACCCCTCCGTC 57.316 45.455 0.00 0.00 0.00 4.79
5863 6420 4.472108 TCAATTACTCATTTACCCCTCCGT 59.528 41.667 0.00 0.00 0.00 4.69
5864 6421 5.031066 TCAATTACTCATTTACCCCTCCG 57.969 43.478 0.00 0.00 0.00 4.63
5865 6422 6.365520 ACATCAATTACTCATTTACCCCTCC 58.634 40.000 0.00 0.00 0.00 4.30
5866 6423 7.881775 AACATCAATTACTCATTTACCCCTC 57.118 36.000 0.00 0.00 0.00 4.30
5867 6424 7.363793 GCAAACATCAATTACTCATTTACCCCT 60.364 37.037 0.00 0.00 0.00 4.79
5868 6425 6.756542 GCAAACATCAATTACTCATTTACCCC 59.243 38.462 0.00 0.00 0.00 4.95
5870 6427 8.243426 TCTGCAAACATCAATTACTCATTTACC 58.757 33.333 0.00 0.00 0.00 2.85
5871 6428 9.793252 ATCTGCAAACATCAATTACTCATTTAC 57.207 29.630 0.00 0.00 0.00 2.01
5872 6429 9.791820 CATCTGCAAACATCAATTACTCATTTA 57.208 29.630 0.00 0.00 0.00 1.40
5873 6430 7.277098 GCATCTGCAAACATCAATTACTCATTT 59.723 33.333 0.00 0.00 41.59 2.32
5874 6431 6.755141 GCATCTGCAAACATCAATTACTCATT 59.245 34.615 0.00 0.00 41.59 2.57
5875 6432 6.096423 AGCATCTGCAAACATCAATTACTCAT 59.904 34.615 4.79 0.00 45.16 2.90
5876 6433 5.416639 AGCATCTGCAAACATCAATTACTCA 59.583 36.000 4.79 0.00 45.16 3.41
5901 6458 6.252599 AGTCTGGCATTTAATATCTGGACA 57.747 37.500 0.00 0.00 0.00 4.02
5902 6459 7.573968 AAAGTCTGGCATTTAATATCTGGAC 57.426 36.000 0.00 0.00 0.00 4.02
5903 6460 9.693739 TTAAAAGTCTGGCATTTAATATCTGGA 57.306 29.630 0.00 0.00 28.87 3.86
5910 6467 8.197439 GCTGGTATTAAAAGTCTGGCATTTAAT 58.803 33.333 16.36 16.36 41.20 1.40
5911 6468 7.543756 GCTGGTATTAAAAGTCTGGCATTTAA 58.456 34.615 5.09 5.09 35.56 1.52
5912 6469 6.183360 CGCTGGTATTAAAAGTCTGGCATTTA 60.183 38.462 0.00 0.00 0.00 1.40
5913 6470 5.393027 CGCTGGTATTAAAAGTCTGGCATTT 60.393 40.000 0.00 0.00 0.00 2.32
5921 6478 5.028375 GCATGTTCGCTGGTATTAAAAGTC 58.972 41.667 0.00 0.00 0.00 3.01
5923 6480 5.235305 AGCATGTTCGCTGGTATTAAAAG 57.765 39.130 0.00 0.00 41.85 2.27
5931 6488 2.343758 ACGAGCATGTTCGCTGGT 59.656 55.556 28.72 9.27 44.88 4.00
5932 6489 1.416813 GAGACGAGCATGTTCGCTGG 61.417 60.000 28.72 7.51 44.01 4.85
5935 6492 1.192793 GTAGAGACGAGCATGTTCGC 58.807 55.000 28.72 21.12 44.15 4.70
5943 6500 1.008309 GCGGGATGTAGAGACGAGC 60.008 63.158 0.00 0.00 0.00 5.03
5952 6509 1.758440 GCTGGAGATGGCGGGATGTA 61.758 60.000 0.00 0.00 0.00 2.29
5954 6511 2.281345 GCTGGAGATGGCGGGATG 60.281 66.667 0.00 0.00 0.00 3.51
5955 6512 3.933722 CGCTGGAGATGGCGGGAT 61.934 66.667 0.00 0.00 46.42 3.85
5960 6517 2.892425 CGAACCGCTGGAGATGGC 60.892 66.667 1.50 0.00 0.00 4.40
5961 6518 1.519455 GACGAACCGCTGGAGATGG 60.519 63.158 1.50 0.00 0.00 3.51
5962 6519 1.519455 GGACGAACCGCTGGAGATG 60.519 63.158 1.50 0.00 0.00 2.90
5964 6521 3.379445 GGGACGAACCGCTGGAGA 61.379 66.667 1.50 0.00 40.11 3.71
5980 6537 1.073199 CTATTTAGGCGCCCTGGGG 59.927 63.158 26.15 5.60 34.61 4.96
5981 6538 0.035458 CTCTATTTAGGCGCCCTGGG 59.965 60.000 26.15 8.86 34.61 4.45
5982 6539 0.603975 GCTCTATTTAGGCGCCCTGG 60.604 60.000 26.15 7.92 34.61 4.45
5984 6541 1.367840 CGCTCTATTTAGGCGCCCT 59.632 57.895 26.15 13.52 42.28 5.19
5985 6542 1.668151 CCGCTCTATTTAGGCGCCC 60.668 63.158 26.15 5.07 46.29 6.13
5986 6543 2.318352 GCCGCTCTATTTAGGCGCC 61.318 63.158 21.89 21.89 46.29 6.53
5990 6547 0.035458 CCCAGGCCGCTCTATTTAGG 59.965 60.000 0.00 0.00 0.00 2.69
5991 6548 0.035458 CCCCAGGCCGCTCTATTTAG 59.965 60.000 0.00 0.00 0.00 1.85
5992 6549 1.415672 CCCCCAGGCCGCTCTATTTA 61.416 60.000 0.00 0.00 0.00 1.40
5993 6550 2.757124 CCCCCAGGCCGCTCTATTT 61.757 63.158 0.00 0.00 0.00 1.40
5994 6551 3.171388 CCCCCAGGCCGCTCTATT 61.171 66.667 0.00 0.00 0.00 1.73
6021 6578 4.176752 CCCAGGGGCCGAACTAGC 62.177 72.222 0.00 0.00 0.00 3.42
6022 6579 3.480133 CCCCAGGGGCCGAACTAG 61.480 72.222 13.35 0.00 35.35 2.57
6042 7277 1.435515 CGTGACTGGGAGCTAGCTC 59.564 63.158 32.65 32.65 42.04 4.09
6073 7308 2.631012 ATTTCCCGCATCCTGAGGCC 62.631 60.000 0.00 0.00 35.89 5.19
6074 7309 0.753111 AATTTCCCGCATCCTGAGGC 60.753 55.000 0.00 0.00 35.89 4.70
6075 7310 1.312815 GAATTTCCCGCATCCTGAGG 58.687 55.000 0.00 0.00 37.06 3.86
6076 7311 2.042686 TGAATTTCCCGCATCCTGAG 57.957 50.000 0.00 0.00 0.00 3.35
6077 7312 2.491693 GTTTGAATTTCCCGCATCCTGA 59.508 45.455 0.00 0.00 0.00 3.86
6078 7313 2.493278 AGTTTGAATTTCCCGCATCCTG 59.507 45.455 0.00 0.00 0.00 3.86
6080 7315 3.253230 CAAGTTTGAATTTCCCGCATCC 58.747 45.455 0.00 0.00 0.00 3.51
6081 7316 3.253230 CCAAGTTTGAATTTCCCGCATC 58.747 45.455 0.00 0.00 0.00 3.91
6084 7319 2.672714 GACCAAGTTTGAATTTCCCGC 58.327 47.619 0.00 0.00 0.00 6.13
6086 7321 4.295870 GAACGACCAAGTTTGAATTTCCC 58.704 43.478 0.00 0.00 34.00 3.97
6088 7323 4.295870 GGGAACGACCAAGTTTGAATTTC 58.704 43.478 0.00 0.00 41.20 2.17
6105 7340 0.790814 CGTCTTTTGAGAGCGGGAAC 59.209 55.000 0.00 0.00 0.00 3.62
6106 7341 0.949105 GCGTCTTTTGAGAGCGGGAA 60.949 55.000 0.00 0.00 0.00 3.97
6107 7342 1.374252 GCGTCTTTTGAGAGCGGGA 60.374 57.895 0.00 0.00 0.00 5.14
6108 7343 2.391389 GGCGTCTTTTGAGAGCGGG 61.391 63.158 0.00 0.00 35.13 6.13
6109 7344 2.730672 CGGCGTCTTTTGAGAGCGG 61.731 63.158 0.00 0.00 35.13 5.52
6110 7345 2.772189 CGGCGTCTTTTGAGAGCG 59.228 61.111 0.00 0.00 35.13 5.03
6111 7346 1.841663 TTGCGGCGTCTTTTGAGAGC 61.842 55.000 9.37 0.00 34.04 4.09
6112 7347 0.586319 TTTGCGGCGTCTTTTGAGAG 59.414 50.000 9.37 0.00 0.00 3.20
6115 7350 0.239879 GGATTTGCGGCGTCTTTTGA 59.760 50.000 9.37 0.00 0.00 2.69
6116 7351 1.065031 CGGATTTGCGGCGTCTTTTG 61.065 55.000 9.37 0.00 0.00 2.44
6117 7352 1.209127 CGGATTTGCGGCGTCTTTT 59.791 52.632 9.37 0.00 0.00 2.27
6119 7354 3.124921 CCGGATTTGCGGCGTCTT 61.125 61.111 9.37 0.00 0.00 3.01
6134 7369 2.052414 GACTACGTCCGATCGCCG 60.052 66.667 19.54 19.54 38.18 6.46
6136 7371 1.009900 CCAGACTACGTCCGATCGC 60.010 63.158 10.32 0.00 32.18 4.58
6137 7372 1.009900 GCCAGACTACGTCCGATCG 60.010 63.158 8.51 8.51 32.18 3.69
6138 7373 1.009900 CGCCAGACTACGTCCGATC 60.010 63.158 0.00 0.00 32.18 3.69
6140 7375 0.673333 TAACGCCAGACTACGTCCGA 60.673 55.000 0.00 0.00 42.68 4.55
6142 7377 0.523072 TGTAACGCCAGACTACGTCC 59.477 55.000 0.00 0.00 42.68 4.79
6143 7378 2.336554 TTGTAACGCCAGACTACGTC 57.663 50.000 0.00 0.00 42.68 4.34
6144 7379 2.798976 TTTGTAACGCCAGACTACGT 57.201 45.000 0.00 0.00 46.07 3.57
6162 7397 4.025401 CGGCGGCGCTCTGTTTTT 62.025 61.111 32.30 0.00 0.00 1.94
6184 7419 4.754667 GAGTGAACCGACCCCGCC 62.755 72.222 0.00 0.00 0.00 6.13
6186 7421 4.430765 CCGAGTGAACCGACCCCG 62.431 72.222 0.00 0.00 0.00 5.73
6187 7422 4.754667 GCCGAGTGAACCGACCCC 62.755 72.222 0.00 0.00 0.00 4.95
6195 7430 4.323477 CCAACCCCGCCGAGTGAA 62.323 66.667 0.00 0.00 0.00 3.18
6197 7432 4.636435 AACCAACCCCGCCGAGTG 62.636 66.667 0.00 0.00 0.00 3.51
6198 7433 4.324991 GAACCAACCCCGCCGAGT 62.325 66.667 0.00 0.00 0.00 4.18
6205 7440 1.231928 AACACCTGGAACCAACCCC 59.768 57.895 0.00 0.00 0.00 4.95


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.