Multiple sequence alignment - TraesCS5B01G542100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G542100 chr5B 100.000 3168 0 0 1 3168 696154031 696157198 0.000000e+00 5851.0
1 TraesCS5B01G542100 chr5B 91.561 237 20 0 610 846 696165413 696165649 8.470000e-86 327.0
2 TraesCS5B01G542100 chr5B 100.000 102 0 0 499 600 696154630 696154529 4.170000e-44 189.0
3 TraesCS5B01G542100 chr5B 95.238 105 4 1 500 604 27484742 27484845 7.030000e-37 165.0
4 TraesCS5B01G542100 chr5B 92.661 109 7 1 500 608 364122604 364122497 4.230000e-34 156.0
5 TraesCS5B01G542100 chr5B 88.136 59 7 0 2412 2470 696156380 696156438 1.580000e-08 71.3
6 TraesCS5B01G542100 chr5B 88.136 59 7 0 2350 2408 696156442 696156500 1.580000e-08 71.3
7 TraesCS5B01G542100 chr4A 90.723 1121 79 11 1466 2570 614005485 614006596 0.000000e+00 1471.0
8 TraesCS5B01G542100 chr4A 94.241 573 30 1 610 1179 614004669 614005241 0.000000e+00 872.0
9 TraesCS5B01G542100 chr4A 92.171 281 11 2 213 492 614004349 614004619 1.380000e-103 387.0
10 TraesCS5B01G542100 chr4A 89.655 232 24 0 615 846 614014831 614015062 2.390000e-76 296.0
11 TraesCS5B01G542100 chr5D 93.432 944 36 5 1898 2836 554575636 554574714 0.000000e+00 1376.0
12 TraesCS5B01G542100 chr5D 90.343 466 24 6 875 1322 554576926 554576464 2.720000e-165 592.0
13 TraesCS5B01G542100 chr5D 92.717 357 25 1 1459 1815 554576384 554576029 6.060000e-142 514.0
14 TraesCS5B01G542100 chr5D 94.483 290 13 2 213 501 554577567 554577280 8.060000e-121 444.0
15 TraesCS5B01G542100 chr5D 95.941 271 9 2 610 878 554577240 554576970 3.750000e-119 438.0
16 TraesCS5B01G542100 chr5D 89.123 285 22 5 2852 3128 554574732 554574449 2.340000e-91 346.0
17 TraesCS5B01G542100 chr5D 89.823 226 23 0 621 846 554521103 554520878 1.110000e-74 291.0
18 TraesCS5B01G542100 chr5D 84.030 263 40 2 935 1196 554520729 554520468 5.250000e-63 252.0
19 TraesCS5B01G542100 chr5D 90.323 62 6 0 2412 2473 554575182 554575121 7.280000e-12 82.4
20 TraesCS5B01G542100 chr5D 88.710 62 7 0 2350 2411 554575120 554575059 3.390000e-10 76.8
21 TraesCS5B01G542100 chr5D 80.000 90 15 3 123 210 403153171 403153259 2.640000e-06 63.9
22 TraesCS5B01G542100 chr4D 90.336 238 21 2 610 846 477089307 477089071 8.530000e-81 311.0
23 TraesCS5B01G542100 chr4D 90.435 230 22 0 932 1161 477088933 477088704 1.430000e-78 303.0
24 TraesCS5B01G542100 chr4D 95.714 70 3 0 386 455 477089460 477089391 2.580000e-21 113.0
25 TraesCS5B01G542100 chr2A 89.831 236 18 6 1941 2172 728028553 728028786 6.640000e-77 298.0
26 TraesCS5B01G542100 chr2A 88.073 218 26 0 628 845 728021900 728022117 3.130000e-65 259.0
27 TraesCS5B01G542100 chr2B 88.017 242 23 6 1935 2172 719516744 719516983 6.690000e-72 281.0
28 TraesCS5B01G542100 chr2B 96.078 102 2 1 500 599 154830150 154830251 7.030000e-37 165.0
29 TraesCS5B01G542100 chr2B 96.078 102 2 1 500 599 154830251 154830150 7.030000e-37 165.0
30 TraesCS5B01G542100 chr2B 89.583 48 5 0 164 211 539366674 539366627 9.490000e-06 62.1
31 TraesCS5B01G542100 chr2D 86.777 242 24 7 1935 2172 593230992 593231229 2.420000e-66 263.0
32 TraesCS5B01G542100 chr2D 88.073 218 26 0 628 845 593224151 593224368 3.130000e-65 259.0
33 TraesCS5B01G542100 chr5A 86.878 221 26 3 625 844 25840280 25840062 8.780000e-61 244.0
34 TraesCS5B01G542100 chr5A 84.783 92 13 1 112 202 579853881 579853972 1.210000e-14 91.6
35 TraesCS5B01G542100 chr6B 98.000 100 1 1 500 599 678685775 678685873 4.200000e-39 172.0
36 TraesCS5B01G542100 chr6B 98.000 100 1 1 500 599 678685873 678685775 4.200000e-39 172.0
37 TraesCS5B01G542100 chr7B 96.040 101 3 1 499 599 125882184 125882283 2.530000e-36 163.0
38 TraesCS5B01G542100 chr7B 96.040 101 3 1 500 600 125882283 125882184 2.530000e-36 163.0
39 TraesCS5B01G542100 chr7D 84.043 94 8 7 145 235 597994912 597995001 2.020000e-12 84.2
40 TraesCS5B01G542100 chr6A 86.765 68 4 5 145 210 8387151 8387215 1.580000e-08 71.3
41 TraesCS5B01G542100 chr3B 89.362 47 5 0 164 210 592646558 592646512 3.410000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G542100 chr5B 696154031 696157198 3167 False 1997.866667 5851 92.090667 1 3168 3 chr5B.!!$F3 3167
1 TraesCS5B01G542100 chr4A 614004349 614006596 2247 False 910.000000 1471 92.378333 213 2570 3 chr4A.!!$F2 2357
2 TraesCS5B01G542100 chr5D 554574449 554577567 3118 True 483.650000 1376 91.884000 213 3128 8 chr5D.!!$R2 2915
3 TraesCS5B01G542100 chr5D 554520468 554521103 635 True 271.500000 291 86.926500 621 1196 2 chr5D.!!$R1 575
4 TraesCS5B01G542100 chr4D 477088704 477089460 756 True 242.333333 311 92.161667 386 1161 3 chr4D.!!$R1 775

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
111 112 0.035820 ACGTTATCATGCCCGGTGTT 60.036 50.0 0.00 0.0 0.00 3.32 F
149 150 0.035820 GCCACCGTGTTTCCATCCTA 60.036 55.0 0.00 0.0 0.00 2.94 F
600 626 0.038744 TTCCGAACGGAGGGAGTAGT 59.961 55.0 15.34 0.0 46.06 2.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1533 1798 0.178873 TCTTGTTAGGGGCCCACTCT 60.179 55.000 27.72 14.67 0.00 3.24 R
2130 2708 2.234168 TGACCACCATCAATGCAAATGG 59.766 45.455 19.24 19.24 46.53 3.16 R
2470 3059 0.869880 TGAGAGTTCGTGTGTGCGTG 60.870 55.000 0.00 0.00 0.00 5.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 2.504367 ACTCAATTTGACGTTCCCTGG 58.496 47.619 0.00 0.00 0.00 4.45
22 23 2.158667 ACTCAATTTGACGTTCCCTGGT 60.159 45.455 0.00 0.00 0.00 4.00
23 24 2.884639 CTCAATTTGACGTTCCCTGGTT 59.115 45.455 0.00 0.00 0.00 3.67
24 25 3.292460 TCAATTTGACGTTCCCTGGTTT 58.708 40.909 0.00 0.00 0.00 3.27
25 26 4.462133 TCAATTTGACGTTCCCTGGTTTA 58.538 39.130 0.00 0.00 0.00 2.01
26 27 5.074115 TCAATTTGACGTTCCCTGGTTTAT 58.926 37.500 0.00 0.00 0.00 1.40
27 28 6.239396 TCAATTTGACGTTCCCTGGTTTATA 58.761 36.000 0.00 0.00 0.00 0.98
28 29 6.373216 TCAATTTGACGTTCCCTGGTTTATAG 59.627 38.462 0.00 0.00 0.00 1.31
29 30 3.899052 TGACGTTCCCTGGTTTATAGG 57.101 47.619 0.00 0.00 35.01 2.57
30 31 3.443052 TGACGTTCCCTGGTTTATAGGA 58.557 45.455 0.00 0.00 37.52 2.94
31 32 3.449737 TGACGTTCCCTGGTTTATAGGAG 59.550 47.826 0.00 0.00 37.52 3.69
32 33 3.447950 ACGTTCCCTGGTTTATAGGAGT 58.552 45.455 0.00 0.00 37.52 3.85
33 34 4.613437 ACGTTCCCTGGTTTATAGGAGTA 58.387 43.478 0.00 0.00 37.52 2.59
34 35 4.648307 ACGTTCCCTGGTTTATAGGAGTAG 59.352 45.833 0.00 0.00 37.52 2.57
35 36 4.648307 CGTTCCCTGGTTTATAGGAGTAGT 59.352 45.833 0.00 0.00 37.52 2.73
36 37 5.128335 CGTTCCCTGGTTTATAGGAGTAGTT 59.872 44.000 0.00 0.00 37.52 2.24
37 38 6.346896 GTTCCCTGGTTTATAGGAGTAGTTG 58.653 44.000 0.00 0.00 37.52 3.16
38 39 5.596763 TCCCTGGTTTATAGGAGTAGTTGT 58.403 41.667 0.00 0.00 37.52 3.32
39 40 6.744822 TCCCTGGTTTATAGGAGTAGTTGTA 58.255 40.000 0.00 0.00 37.52 2.41
40 41 6.837568 TCCCTGGTTTATAGGAGTAGTTGTAG 59.162 42.308 0.00 0.00 37.52 2.74
41 42 6.041751 CCCTGGTTTATAGGAGTAGTTGTAGG 59.958 46.154 0.00 0.00 37.52 3.18
42 43 6.837568 CCTGGTTTATAGGAGTAGTTGTAGGA 59.162 42.308 0.00 0.00 37.52 2.94
43 44 7.343833 CCTGGTTTATAGGAGTAGTTGTAGGAA 59.656 40.741 0.00 0.00 37.52 3.36
44 45 8.669055 TGGTTTATAGGAGTAGTTGTAGGAAA 57.331 34.615 0.00 0.00 0.00 3.13
45 46 8.534496 TGGTTTATAGGAGTAGTTGTAGGAAAC 58.466 37.037 0.00 0.00 0.00 2.78
46 47 7.984050 GGTTTATAGGAGTAGTTGTAGGAAACC 59.016 40.741 0.00 0.00 35.58 3.27
47 48 8.534496 GTTTATAGGAGTAGTTGTAGGAAACCA 58.466 37.037 0.00 0.00 0.00 3.67
48 49 8.669055 TTATAGGAGTAGTTGTAGGAAACCAA 57.331 34.615 0.00 0.00 0.00 3.67
49 50 7.750947 ATAGGAGTAGTTGTAGGAAACCAAT 57.249 36.000 0.00 0.00 0.00 3.16
50 51 6.449830 AGGAGTAGTTGTAGGAAACCAATT 57.550 37.500 0.00 0.00 0.00 2.32
51 52 6.238648 AGGAGTAGTTGTAGGAAACCAATTG 58.761 40.000 0.00 0.00 0.00 2.32
52 53 6.043938 AGGAGTAGTTGTAGGAAACCAATTGA 59.956 38.462 7.12 0.00 0.00 2.57
53 54 6.884836 GGAGTAGTTGTAGGAAACCAATTGAT 59.115 38.462 7.12 0.00 0.00 2.57
54 55 7.065923 GGAGTAGTTGTAGGAAACCAATTGATC 59.934 40.741 7.12 2.26 0.00 2.92
55 56 7.458397 AGTAGTTGTAGGAAACCAATTGATCA 58.542 34.615 7.12 0.00 0.00 2.92
56 57 6.575162 AGTTGTAGGAAACCAATTGATCAC 57.425 37.500 7.12 0.00 0.00 3.06
57 58 6.068010 AGTTGTAGGAAACCAATTGATCACA 58.932 36.000 7.12 1.74 0.00 3.58
58 59 6.549364 AGTTGTAGGAAACCAATTGATCACAA 59.451 34.615 7.12 7.19 40.42 3.33
59 60 7.233348 AGTTGTAGGAAACCAATTGATCACAAT 59.767 33.333 7.12 0.00 46.99 2.71
71 72 5.484173 TTGATCACAATTAATGCGGACTC 57.516 39.130 0.00 0.00 0.00 3.36
72 73 4.512484 TGATCACAATTAATGCGGACTCA 58.488 39.130 0.00 0.00 0.00 3.41
73 74 4.332543 TGATCACAATTAATGCGGACTCAC 59.667 41.667 0.00 0.00 0.00 3.51
74 75 2.670905 TCACAATTAATGCGGACTCACG 59.329 45.455 0.00 0.00 0.00 4.35
82 83 3.857854 CGGACTCACGCATGCTGC 61.858 66.667 17.13 0.17 40.69 5.25
83 84 2.743538 GGACTCACGCATGCTGCA 60.744 61.111 17.13 4.13 45.36 4.41
84 85 2.110967 GGACTCACGCATGCTGCAT 61.111 57.895 17.13 9.81 45.36 3.96
85 86 1.062047 GACTCACGCATGCTGCATG 59.938 57.895 32.56 32.56 45.36 4.06
96 97 3.773117 GCTGCATGCAAACTACGTT 57.227 47.368 22.88 0.00 42.31 3.99
97 98 2.892373 GCTGCATGCAAACTACGTTA 57.108 45.000 22.88 0.00 42.31 3.18
98 99 3.405170 GCTGCATGCAAACTACGTTAT 57.595 42.857 22.88 0.00 42.31 1.89
99 100 3.354397 GCTGCATGCAAACTACGTTATC 58.646 45.455 22.88 0.00 42.31 1.75
100 101 3.181511 GCTGCATGCAAACTACGTTATCA 60.182 43.478 22.88 0.00 42.31 2.15
101 102 4.496341 GCTGCATGCAAACTACGTTATCAT 60.496 41.667 22.88 0.00 42.31 2.45
102 103 4.907579 TGCATGCAAACTACGTTATCATG 58.092 39.130 20.30 12.64 37.87 3.07
103 104 3.725740 GCATGCAAACTACGTTATCATGC 59.274 43.478 14.21 19.97 44.80 4.06
104 105 4.282068 CATGCAAACTACGTTATCATGCC 58.718 43.478 0.00 0.00 32.88 4.40
105 106 2.680841 TGCAAACTACGTTATCATGCCC 59.319 45.455 0.00 0.00 28.24 5.36
106 107 2.286184 GCAAACTACGTTATCATGCCCG 60.286 50.000 0.00 0.00 0.00 6.13
107 108 2.234300 AACTACGTTATCATGCCCGG 57.766 50.000 0.00 0.00 0.00 5.73
108 109 1.117150 ACTACGTTATCATGCCCGGT 58.883 50.000 0.00 0.00 0.00 5.28
109 110 1.202486 ACTACGTTATCATGCCCGGTG 60.202 52.381 0.00 0.00 0.00 4.94
110 111 0.825410 TACGTTATCATGCCCGGTGT 59.175 50.000 0.00 0.00 0.00 4.16
111 112 0.035820 ACGTTATCATGCCCGGTGTT 60.036 50.000 0.00 0.00 0.00 3.32
112 113 0.376852 CGTTATCATGCCCGGTGTTG 59.623 55.000 0.00 0.00 0.00 3.33
113 114 1.459450 GTTATCATGCCCGGTGTTGT 58.541 50.000 0.00 0.00 0.00 3.32
114 115 2.634600 GTTATCATGCCCGGTGTTGTA 58.365 47.619 0.00 0.00 0.00 2.41
115 116 2.319136 TATCATGCCCGGTGTTGTAC 57.681 50.000 0.00 0.00 0.00 2.90
116 117 0.618458 ATCATGCCCGGTGTTGTACT 59.382 50.000 0.00 0.00 0.00 2.73
117 118 0.321210 TCATGCCCGGTGTTGTACTG 60.321 55.000 0.00 0.00 35.32 2.74
118 119 1.674322 ATGCCCGGTGTTGTACTGC 60.674 57.895 0.00 0.00 34.15 4.40
119 120 3.053896 GCCCGGTGTTGTACTGCC 61.054 66.667 0.00 0.00 34.15 4.85
120 121 2.428187 CCCGGTGTTGTACTGCCA 59.572 61.111 0.00 0.00 34.15 4.92
121 122 1.671054 CCCGGTGTTGTACTGCCAG 60.671 63.158 0.00 0.00 34.15 4.85
122 123 1.369692 CCGGTGTTGTACTGCCAGA 59.630 57.895 0.00 0.00 34.15 3.86
123 124 0.036388 CCGGTGTTGTACTGCCAGAT 60.036 55.000 0.00 0.00 34.15 2.90
124 125 1.359848 CGGTGTTGTACTGCCAGATC 58.640 55.000 0.00 0.00 0.00 2.75
125 126 1.739067 GGTGTTGTACTGCCAGATCC 58.261 55.000 0.00 0.00 0.00 3.36
126 127 1.359848 GTGTTGTACTGCCAGATCCG 58.640 55.000 0.00 0.00 0.00 4.18
127 128 1.067142 GTGTTGTACTGCCAGATCCGA 60.067 52.381 0.00 0.00 0.00 4.55
128 129 1.831106 TGTTGTACTGCCAGATCCGAT 59.169 47.619 0.00 0.00 0.00 4.18
129 130 2.205074 GTTGTACTGCCAGATCCGATG 58.795 52.381 0.00 0.00 0.00 3.84
130 131 0.752658 TGTACTGCCAGATCCGATGG 59.247 55.000 0.00 0.00 41.04 3.51
135 136 2.111878 CCAGATCCGATGGCCACC 59.888 66.667 8.16 0.00 0.00 4.61
136 137 2.280389 CAGATCCGATGGCCACCG 60.280 66.667 14.39 14.39 0.00 4.94
137 138 2.764128 AGATCCGATGGCCACCGT 60.764 61.111 20.55 0.00 0.00 4.83
138 139 2.588877 GATCCGATGGCCACCGTG 60.589 66.667 20.55 10.39 0.00 4.94
139 140 3.385749 GATCCGATGGCCACCGTGT 62.386 63.158 20.55 6.10 0.00 4.49
140 141 2.869503 GATCCGATGGCCACCGTGTT 62.870 60.000 20.55 4.95 0.00 3.32
141 142 2.478335 ATCCGATGGCCACCGTGTTT 62.478 55.000 20.55 0.00 0.00 2.83
142 143 2.686816 CCGATGGCCACCGTGTTTC 61.687 63.158 20.55 4.25 0.00 2.78
143 144 2.686816 CGATGGCCACCGTGTTTCC 61.687 63.158 12.80 0.00 0.00 3.13
144 145 1.602323 GATGGCCACCGTGTTTCCA 60.602 57.895 8.16 6.80 0.00 3.53
145 146 0.965363 GATGGCCACCGTGTTTCCAT 60.965 55.000 8.16 13.75 39.99 3.41
146 147 0.965363 ATGGCCACCGTGTTTCCATC 60.965 55.000 8.16 0.00 32.46 3.51
147 148 2.340328 GGCCACCGTGTTTCCATCC 61.340 63.158 0.00 0.00 0.00 3.51
148 149 1.303317 GCCACCGTGTTTCCATCCT 60.303 57.895 0.00 0.00 0.00 3.24
149 150 0.035820 GCCACCGTGTTTCCATCCTA 60.036 55.000 0.00 0.00 0.00 2.94
150 151 1.734163 CCACCGTGTTTCCATCCTAC 58.266 55.000 0.00 0.00 0.00 3.18
151 152 1.355971 CACCGTGTTTCCATCCTACG 58.644 55.000 0.00 0.00 34.78 3.51
152 153 3.059603 CCGTGTTTCCATCCTACGG 57.940 57.895 0.00 0.00 46.66 4.02
153 154 0.248289 CCGTGTTTCCATCCTACGGT 59.752 55.000 0.00 0.00 46.63 4.83
154 155 1.636988 CGTGTTTCCATCCTACGGTC 58.363 55.000 0.00 0.00 0.00 4.79
155 156 1.203994 CGTGTTTCCATCCTACGGTCT 59.796 52.381 0.00 0.00 0.00 3.85
156 157 2.618053 GTGTTTCCATCCTACGGTCTG 58.382 52.381 0.00 0.00 0.00 3.51
157 158 2.028385 GTGTTTCCATCCTACGGTCTGT 60.028 50.000 0.00 0.00 0.00 3.41
158 159 2.028476 TGTTTCCATCCTACGGTCTGTG 60.028 50.000 0.00 0.00 0.00 3.66
159 160 2.225382 TTCCATCCTACGGTCTGTGA 57.775 50.000 0.00 0.00 0.00 3.58
160 161 1.471119 TCCATCCTACGGTCTGTGAC 58.529 55.000 0.00 0.00 0.00 3.67
161 162 1.005569 TCCATCCTACGGTCTGTGACT 59.994 52.381 0.00 0.00 32.47 3.41
162 163 2.240414 TCCATCCTACGGTCTGTGACTA 59.760 50.000 0.00 0.00 32.47 2.59
163 164 2.619177 CCATCCTACGGTCTGTGACTAG 59.381 54.545 0.00 0.00 32.47 2.57
164 165 3.280295 CATCCTACGGTCTGTGACTAGT 58.720 50.000 0.00 0.00 32.47 2.57
165 166 2.983229 TCCTACGGTCTGTGACTAGTC 58.017 52.381 16.32 16.32 32.47 2.59
166 167 2.570752 TCCTACGGTCTGTGACTAGTCT 59.429 50.000 23.01 3.48 32.47 3.24
167 168 2.678836 CCTACGGTCTGTGACTAGTCTG 59.321 54.545 23.01 13.19 32.47 3.51
168 169 2.563261 ACGGTCTGTGACTAGTCTGA 57.437 50.000 23.01 15.07 32.47 3.27
169 170 3.074675 ACGGTCTGTGACTAGTCTGAT 57.925 47.619 23.01 2.97 32.47 2.90
170 171 4.217836 ACGGTCTGTGACTAGTCTGATA 57.782 45.455 23.01 0.19 32.47 2.15
171 172 4.783055 ACGGTCTGTGACTAGTCTGATAT 58.217 43.478 23.01 6.65 32.47 1.63
172 173 4.576873 ACGGTCTGTGACTAGTCTGATATG 59.423 45.833 23.01 10.34 32.47 1.78
173 174 4.816925 CGGTCTGTGACTAGTCTGATATGA 59.183 45.833 23.01 10.07 32.47 2.15
174 175 5.277586 CGGTCTGTGACTAGTCTGATATGAC 60.278 48.000 23.01 18.73 33.72 3.06
175 176 5.277586 GGTCTGTGACTAGTCTGATATGACG 60.278 48.000 23.01 8.13 36.15 4.35
176 177 4.273724 TCTGTGACTAGTCTGATATGACGC 59.726 45.833 23.01 2.01 41.47 5.19
177 178 3.945285 TGTGACTAGTCTGATATGACGCA 59.055 43.478 23.01 4.65 41.47 5.24
178 179 4.398044 TGTGACTAGTCTGATATGACGCAA 59.602 41.667 23.01 0.00 41.47 4.85
179 180 4.973051 GTGACTAGTCTGATATGACGCAAG 59.027 45.833 23.01 0.00 41.47 4.01
180 181 4.036852 TGACTAGTCTGATATGACGCAAGG 59.963 45.833 23.01 0.00 46.39 3.61
181 182 2.898729 AGTCTGATATGACGCAAGGG 57.101 50.000 0.00 0.00 46.39 3.95
182 183 2.388735 AGTCTGATATGACGCAAGGGA 58.611 47.619 0.00 0.00 46.39 4.20
183 184 2.968574 AGTCTGATATGACGCAAGGGAT 59.031 45.455 0.00 0.00 46.39 3.85
184 185 3.006323 AGTCTGATATGACGCAAGGGATC 59.994 47.826 0.00 0.00 46.39 3.36
185 186 2.965147 TCTGATATGACGCAAGGGATCA 59.035 45.455 0.00 0.00 46.39 2.92
186 187 3.006217 TCTGATATGACGCAAGGGATCAG 59.994 47.826 8.05 8.05 46.39 2.90
187 188 2.700371 TGATATGACGCAAGGGATCAGT 59.300 45.455 0.00 0.00 46.39 3.41
188 189 3.895041 TGATATGACGCAAGGGATCAGTA 59.105 43.478 0.00 0.00 46.39 2.74
189 190 2.898729 ATGACGCAAGGGATCAGTAG 57.101 50.000 0.00 0.00 46.39 2.57
190 191 1.557099 TGACGCAAGGGATCAGTAGT 58.443 50.000 0.00 0.00 46.39 2.73
191 192 1.476891 TGACGCAAGGGATCAGTAGTC 59.523 52.381 0.00 0.00 46.39 2.59
192 193 1.751924 GACGCAAGGGATCAGTAGTCT 59.248 52.381 0.00 0.00 46.39 3.24
193 194 1.478510 ACGCAAGGGATCAGTAGTCTG 59.521 52.381 0.00 0.00 46.39 3.51
205 206 4.975631 TCAGTAGTCTGATCCCTAGTAGC 58.024 47.826 0.00 0.00 44.58 3.58
206 207 4.661240 TCAGTAGTCTGATCCCTAGTAGCT 59.339 45.833 0.00 0.00 44.58 3.32
207 208 5.001232 CAGTAGTCTGATCCCTAGTAGCTC 58.999 50.000 0.00 0.00 43.76 4.09
208 209 3.518992 AGTCTGATCCCTAGTAGCTCC 57.481 52.381 0.00 0.00 0.00 4.70
209 210 2.109304 AGTCTGATCCCTAGTAGCTCCC 59.891 54.545 0.00 0.00 0.00 4.30
210 211 2.144450 TCTGATCCCTAGTAGCTCCCA 58.856 52.381 0.00 0.00 0.00 4.37
211 212 2.158445 TCTGATCCCTAGTAGCTCCCAC 60.158 54.545 0.00 0.00 0.00 4.61
246 247 3.070302 TGTTTTAATTTGTGGGGTGCCTC 59.930 43.478 0.00 0.00 0.00 4.70
282 284 4.680110 CGGCTATAAAGGAACTCACATACG 59.320 45.833 0.00 0.00 38.49 3.06
353 363 3.513438 GCGAGCGGCAGAGAGAGA 61.513 66.667 1.45 0.00 42.87 3.10
354 364 2.715005 CGAGCGGCAGAGAGAGAG 59.285 66.667 1.45 0.00 0.00 3.20
355 365 2.833533 CGAGCGGCAGAGAGAGAGG 61.834 68.421 1.45 0.00 0.00 3.69
356 366 2.441901 AGCGGCAGAGAGAGAGGG 60.442 66.667 1.45 0.00 0.00 4.30
357 367 3.535962 GCGGCAGAGAGAGAGGGG 61.536 72.222 0.00 0.00 0.00 4.79
358 368 2.837291 CGGCAGAGAGAGAGGGGG 60.837 72.222 0.00 0.00 0.00 5.40
492 518 4.927422 GCTCTTGCTCTTAGTTCTACGAT 58.073 43.478 0.00 0.00 36.03 3.73
501 527 2.759538 AGTTCTACGATCGCAGCTAC 57.240 50.000 16.60 12.85 0.00 3.58
503 529 2.288458 AGTTCTACGATCGCAGCTACTC 59.712 50.000 16.60 1.56 0.00 2.59
504 530 1.227639 TCTACGATCGCAGCTACTCC 58.772 55.000 16.60 0.00 0.00 3.85
508 534 1.663173 GATCGCAGCTACTCCCTCC 59.337 63.158 0.00 0.00 0.00 4.30
511 537 2.711922 CGCAGCTACTCCCTCCGTT 61.712 63.158 0.00 0.00 0.00 4.44
512 538 1.142097 GCAGCTACTCCCTCCGTTC 59.858 63.158 0.00 0.00 0.00 3.95
513 539 1.433879 CAGCTACTCCCTCCGTTCG 59.566 63.158 0.00 0.00 0.00 3.95
515 541 1.751927 GCTACTCCCTCCGTTCGGA 60.752 63.158 13.34 13.34 0.00 4.55
519 545 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
520 546 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
522 548 2.167900 CTCCCTCCGTTCGGAATTACTT 59.832 50.000 14.79 0.00 33.41 2.24
523 549 2.093869 TCCCTCCGTTCGGAATTACTTG 60.094 50.000 14.79 1.97 33.41 3.16
524 550 2.354403 CCCTCCGTTCGGAATTACTTGT 60.354 50.000 14.79 0.00 33.41 3.16
525 551 2.928116 CCTCCGTTCGGAATTACTTGTC 59.072 50.000 14.79 0.00 33.41 3.18
526 552 3.368116 CCTCCGTTCGGAATTACTTGTCT 60.368 47.826 14.79 0.00 33.41 3.41
527 553 3.841643 TCCGTTCGGAATTACTTGTCTC 58.158 45.455 11.66 0.00 0.00 3.36
528 554 2.597305 CCGTTCGGAATTACTTGTCTCG 59.403 50.000 5.19 0.00 0.00 4.04
529 555 3.495193 CGTTCGGAATTACTTGTCTCGA 58.505 45.455 0.00 0.00 0.00 4.04
531 557 4.383649 CGTTCGGAATTACTTGTCTCGAAA 59.616 41.667 0.00 0.00 37.00 3.46
532 558 5.107760 CGTTCGGAATTACTTGTCTCGAAAA 60.108 40.000 0.00 0.00 37.00 2.29
533 559 6.400727 CGTTCGGAATTACTTGTCTCGAAAAT 60.401 38.462 0.00 0.00 37.00 1.82
534 560 6.403333 TCGGAATTACTTGTCTCGAAAATG 57.597 37.500 0.00 0.00 0.00 2.32
535 561 5.350365 TCGGAATTACTTGTCTCGAAAATGG 59.650 40.000 0.00 0.00 0.00 3.16
536 562 5.350365 CGGAATTACTTGTCTCGAAAATGGA 59.650 40.000 0.00 0.00 0.00 3.41
537 563 6.037172 CGGAATTACTTGTCTCGAAAATGGAT 59.963 38.462 0.00 0.00 0.00 3.41
538 564 7.189512 GGAATTACTTGTCTCGAAAATGGATG 58.810 38.462 0.00 0.00 0.00 3.51
539 565 7.148239 GGAATTACTTGTCTCGAAAATGGATGT 60.148 37.037 0.00 0.00 0.00 3.06
540 566 8.786826 AATTACTTGTCTCGAAAATGGATGTA 57.213 30.769 0.00 0.00 0.00 2.29
541 567 8.964476 ATTACTTGTCTCGAAAATGGATGTAT 57.036 30.769 0.00 0.00 0.00 2.29
542 568 6.910536 ACTTGTCTCGAAAATGGATGTATC 57.089 37.500 0.00 0.00 0.00 2.24
544 570 7.782049 ACTTGTCTCGAAAATGGATGTATCTA 58.218 34.615 0.00 0.00 0.00 1.98
545 571 7.923344 ACTTGTCTCGAAAATGGATGTATCTAG 59.077 37.037 0.00 0.00 0.00 2.43
546 572 7.582667 TGTCTCGAAAATGGATGTATCTAGA 57.417 36.000 0.00 0.00 0.00 2.43
547 573 8.007405 TGTCTCGAAAATGGATGTATCTAGAA 57.993 34.615 0.00 0.00 0.00 2.10
549 575 7.113684 GTCTCGAAAATGGATGTATCTAGAACG 59.886 40.741 0.00 0.00 0.00 3.95
550 576 6.802608 TCGAAAATGGATGTATCTAGAACGT 58.197 36.000 0.00 0.00 0.00 3.99
551 577 7.262772 TCGAAAATGGATGTATCTAGAACGTT 58.737 34.615 0.00 0.00 0.00 3.99
552 578 7.434307 TCGAAAATGGATGTATCTAGAACGTTC 59.566 37.037 20.71 20.71 0.00 3.95
553 579 7.435488 CGAAAATGGATGTATCTAGAACGTTCT 59.565 37.037 31.70 31.70 41.24 3.01
554 580 9.745880 GAAAATGGATGTATCTAGAACGTTCTA 57.254 33.333 30.65 30.65 38.70 2.10
569 595 8.649973 AGAACGTTCTAGATACATCCATTTTC 57.350 34.615 28.80 0.00 35.34 2.29
570 596 7.435488 AGAACGTTCTAGATACATCCATTTTCG 59.565 37.037 28.80 0.00 35.34 3.46
571 597 6.802608 ACGTTCTAGATACATCCATTTTCGA 58.197 36.000 0.00 0.00 0.00 3.71
572 598 6.918569 ACGTTCTAGATACATCCATTTTCGAG 59.081 38.462 0.00 0.00 0.00 4.04
573 599 7.139392 CGTTCTAGATACATCCATTTTCGAGA 58.861 38.462 0.00 0.00 0.00 4.04
574 600 7.113684 CGTTCTAGATACATCCATTTTCGAGAC 59.886 40.741 0.00 0.00 0.00 3.36
575 601 7.582667 TCTAGATACATCCATTTTCGAGACA 57.417 36.000 0.00 0.00 0.00 3.41
576 602 8.007405 TCTAGATACATCCATTTTCGAGACAA 57.993 34.615 0.00 0.00 0.00 3.18
577 603 8.138074 TCTAGATACATCCATTTTCGAGACAAG 58.862 37.037 0.00 0.00 0.00 3.16
578 604 6.644347 AGATACATCCATTTTCGAGACAAGT 58.356 36.000 0.00 0.00 0.00 3.16
579 605 7.782049 AGATACATCCATTTTCGAGACAAGTA 58.218 34.615 0.00 0.00 0.00 2.24
580 606 8.258007 AGATACATCCATTTTCGAGACAAGTAA 58.742 33.333 0.00 0.00 0.00 2.24
581 607 8.964476 ATACATCCATTTTCGAGACAAGTAAT 57.036 30.769 0.00 0.00 0.00 1.89
582 608 7.687941 ACATCCATTTTCGAGACAAGTAATT 57.312 32.000 0.00 0.00 0.00 1.40
583 609 7.752695 ACATCCATTTTCGAGACAAGTAATTC 58.247 34.615 0.00 0.00 0.00 2.17
584 610 6.737254 TCCATTTTCGAGACAAGTAATTCC 57.263 37.500 0.00 0.00 0.00 3.01
585 611 5.350365 TCCATTTTCGAGACAAGTAATTCCG 59.650 40.000 0.00 0.00 0.00 4.30
586 612 5.350365 CCATTTTCGAGACAAGTAATTCCGA 59.650 40.000 0.00 0.00 0.00 4.55
587 613 6.128391 CCATTTTCGAGACAAGTAATTCCGAA 60.128 38.462 0.00 0.00 33.57 4.30
588 614 5.834239 TTTCGAGACAAGTAATTCCGAAC 57.166 39.130 0.00 0.00 34.86 3.95
589 615 3.495193 TCGAGACAAGTAATTCCGAACG 58.505 45.455 0.00 0.00 0.00 3.95
590 616 2.597305 CGAGACAAGTAATTCCGAACGG 59.403 50.000 6.94 6.94 0.00 4.44
591 617 3.671433 CGAGACAAGTAATTCCGAACGGA 60.671 47.826 12.04 12.04 43.52 4.69
592 618 3.846360 AGACAAGTAATTCCGAACGGAG 58.154 45.455 15.34 5.60 46.06 4.63
593 619 2.928116 GACAAGTAATTCCGAACGGAGG 59.072 50.000 15.34 4.52 46.06 4.30
594 620 2.277084 CAAGTAATTCCGAACGGAGGG 58.723 52.381 15.34 0.00 46.06 4.30
595 621 1.856629 AGTAATTCCGAACGGAGGGA 58.143 50.000 15.34 2.49 46.06 4.20
596 622 1.755380 AGTAATTCCGAACGGAGGGAG 59.245 52.381 15.34 0.00 46.06 4.30
597 623 1.479730 GTAATTCCGAACGGAGGGAGT 59.520 52.381 15.34 4.12 46.06 3.85
598 624 1.856629 AATTCCGAACGGAGGGAGTA 58.143 50.000 15.34 1.05 46.06 2.59
599 625 1.400737 ATTCCGAACGGAGGGAGTAG 58.599 55.000 15.34 0.00 46.06 2.57
600 626 0.038744 TTCCGAACGGAGGGAGTAGT 59.961 55.000 15.34 0.00 46.06 2.73
601 627 0.911769 TCCGAACGGAGGGAGTAGTA 59.088 55.000 12.04 0.00 39.76 1.82
602 628 1.492176 TCCGAACGGAGGGAGTAGTAT 59.508 52.381 12.04 0.00 39.76 2.12
603 629 1.878734 CCGAACGGAGGGAGTAGTATC 59.121 57.143 7.53 0.00 37.50 2.24
604 630 2.486907 CCGAACGGAGGGAGTAGTATCT 60.487 54.545 7.53 0.00 37.50 1.98
605 631 3.212685 CGAACGGAGGGAGTAGTATCTT 58.787 50.000 0.00 0.00 0.00 2.40
606 632 4.384056 CGAACGGAGGGAGTAGTATCTTA 58.616 47.826 0.00 0.00 0.00 2.10
607 633 4.451774 CGAACGGAGGGAGTAGTATCTTAG 59.548 50.000 0.00 0.00 0.00 2.18
608 634 5.375773 GAACGGAGGGAGTAGTATCTTAGT 58.624 45.833 0.00 0.00 0.00 2.24
806 832 2.691011 GAGAAGCTTATGGAGACGGTCT 59.309 50.000 11.09 11.09 0.00 3.85
814 840 1.116308 TGGAGACGGTCTGACAAACA 58.884 50.000 16.72 2.17 0.00 2.83
850 876 4.990257 TCGACATACTAGTAAGTTGTGCC 58.010 43.478 19.93 5.08 37.15 5.01
855 881 6.292923 ACATACTAGTAAGTTGTGCCAACAA 58.707 36.000 6.70 3.51 44.06 2.83
895 971 1.815003 GAGCATCAACCAAGTGAAGGG 59.185 52.381 0.00 0.00 33.17 3.95
899 975 3.572255 GCATCAACCAAGTGAAGGGTTTA 59.428 43.478 0.00 0.00 44.78 2.01
902 1042 6.071616 GCATCAACCAAGTGAAGGGTTTAATA 60.072 38.462 0.00 0.00 44.78 0.98
914 1054 8.251026 GTGAAGGGTTTAATAAATTGCTAGCTT 58.749 33.333 17.23 4.51 0.00 3.74
918 1058 8.034804 AGGGTTTAATAAATTGCTAGCTTTGTG 58.965 33.333 17.23 0.00 0.00 3.33
930 1121 5.589855 TGCTAGCTTTGTGTATGTAATGCAT 59.410 36.000 17.23 0.00 42.11 3.96
963 1154 1.072173 GGGCAATTTTGGTTCAAGCCT 59.928 47.619 0.00 0.00 40.40 4.58
984 1175 1.447140 TGCTGAATGTACGGCGGAC 60.447 57.895 17.03 17.03 44.15 4.79
1307 1568 9.553064 AATGGAGTCTTAGCTATGTTTTCTATG 57.447 33.333 6.53 0.00 0.00 2.23
1324 1585 9.469807 GTTTTCTATGACTACTGTATCATCTGG 57.530 37.037 12.73 7.82 36.87 3.86
1326 1587 8.628630 TTCTATGACTACTGTATCATCTGGAG 57.371 38.462 12.73 7.87 36.87 3.86
1330 1591 7.904558 TGACTACTGTATCATCTGGAGAAAT 57.095 36.000 0.00 0.00 0.00 2.17
1342 1607 9.911788 ATCATCTGGAGAAATTATGTACAAGTT 57.088 29.630 0.00 0.00 0.00 2.66
1433 1698 6.102615 ACCTAGCTAAAATTATGTGGGATCCA 59.897 38.462 15.23 0.00 0.00 3.41
1441 1706 6.371595 AATTATGTGGGATCCATCTCTCTC 57.628 41.667 15.23 0.00 35.28 3.20
1442 1707 3.634218 ATGTGGGATCCATCTCTCTCT 57.366 47.619 15.23 0.00 35.28 3.10
1443 1708 2.956132 TGTGGGATCCATCTCTCTCTC 58.044 52.381 15.23 0.00 35.28 3.20
1444 1709 2.517553 TGTGGGATCCATCTCTCTCTCT 59.482 50.000 15.23 0.00 35.28 3.10
1445 1710 3.157087 GTGGGATCCATCTCTCTCTCTC 58.843 54.545 15.23 0.00 35.28 3.20
1446 1711 3.062889 TGGGATCCATCTCTCTCTCTCT 58.937 50.000 15.23 0.00 0.00 3.10
1447 1712 3.074390 TGGGATCCATCTCTCTCTCTCTC 59.926 52.174 15.23 0.00 0.00 3.20
1448 1713 3.331889 GGGATCCATCTCTCTCTCTCTCT 59.668 52.174 15.23 0.00 0.00 3.10
1449 1714 4.566488 GGGATCCATCTCTCTCTCTCTCTC 60.566 54.167 15.23 0.00 0.00 3.20
1450 1715 4.288105 GGATCCATCTCTCTCTCTCTCTCT 59.712 50.000 6.95 0.00 0.00 3.10
1451 1716 4.963318 TCCATCTCTCTCTCTCTCTCTC 57.037 50.000 0.00 0.00 0.00 3.20
1452 1717 4.560739 TCCATCTCTCTCTCTCTCTCTCT 58.439 47.826 0.00 0.00 0.00 3.10
1453 1718 4.590647 TCCATCTCTCTCTCTCTCTCTCTC 59.409 50.000 0.00 0.00 0.00 3.20
1454 1719 4.592351 CCATCTCTCTCTCTCTCTCTCTCT 59.408 50.000 0.00 0.00 0.00 3.10
1455 1720 5.279406 CCATCTCTCTCTCTCTCTCTCTCTC 60.279 52.000 0.00 0.00 0.00 3.20
1456 1721 5.136068 TCTCTCTCTCTCTCTCTCTCTCT 57.864 47.826 0.00 0.00 0.00 3.10
1457 1722 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1458 1723 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1459 1724 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1460 1725 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1461 1726 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1462 1727 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1463 1728 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
1464 1729 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
1490 1755 5.365025 TCTCCATGGTTATCTTTCTCCTCTG 59.635 44.000 12.58 0.00 0.00 3.35
1504 1769 0.597637 CCTCTGTTATGTAGGCGCGG 60.598 60.000 8.83 0.00 0.00 6.46
1518 1783 2.726691 CGCGGTGAACCAGCTTACG 61.727 63.158 0.00 0.00 34.81 3.18
1527 1792 4.933400 GTGAACCAGCTTACGAGGAATTTA 59.067 41.667 0.00 0.00 0.00 1.40
1533 1798 3.055385 AGCTTACGAGGAATTTAGCCACA 60.055 43.478 0.00 0.00 0.00 4.17
1554 1819 0.919710 AGTGGGCCCCTAACAAGATC 59.080 55.000 22.27 0.00 0.00 2.75
1590 1855 1.993956 CCCCAGGATTTGTCACAACA 58.006 50.000 0.00 0.00 0.00 3.33
1624 1889 2.394930 TGTAAGCAATCGCCTAGCAA 57.605 45.000 0.00 0.00 39.83 3.91
1635 1900 2.829720 TCGCCTAGCAAACTTCCTTCTA 59.170 45.455 0.00 0.00 0.00 2.10
1739 2004 6.992123 AGGGAAAAAGATTCCAACATTTCAAC 59.008 34.615 9.27 0.00 40.32 3.18
1762 2027 8.483218 CAACTCATGTGTAAAATAGCTAGATCG 58.517 37.037 0.00 0.00 0.00 3.69
1809 2074 6.818644 AGTGCATTTTTCACTATGATACGAGT 59.181 34.615 0.00 0.00 42.45 4.18
1818 2083 8.596271 TTCACTATGATACGAGTTAGAGAGAG 57.404 38.462 0.00 0.00 0.00 3.20
1821 2086 7.654116 CACTATGATACGAGTTAGAGAGAGTGA 59.346 40.741 0.00 0.00 31.85 3.41
1822 2087 6.854496 ATGATACGAGTTAGAGAGAGTGAC 57.146 41.667 0.00 0.00 0.00 3.67
1841 2106 5.977725 AGTGACGGATTTATACTCAATCACG 59.022 40.000 0.00 0.00 39.09 4.35
1843 2108 6.474427 GTGACGGATTTATACTCAATCACGAA 59.526 38.462 0.00 0.00 32.98 3.85
1874 2143 5.334724 CAAAATTTTGGGAGAGCATAGCT 57.665 39.130 21.00 0.00 36.66 3.32
1876 2145 4.996788 AATTTTGGGAGAGCATAGCTTG 57.003 40.909 0.00 0.00 39.88 4.01
1888 2157 2.424601 GCATAGCTTGATCTGTTTGCCA 59.575 45.455 0.00 0.00 0.00 4.92
1896 2471 5.594926 CTTGATCTGTTTGCCAGTTTCTTT 58.405 37.500 0.00 0.00 42.19 2.52
1961 2536 8.477984 TGCCAGCAAGTTTTCATATATTTTTC 57.522 30.769 0.00 0.00 0.00 2.29
2129 2707 2.432444 CTTCTTACATCACCGGCCAAA 58.568 47.619 0.00 0.00 0.00 3.28
2130 2708 1.816074 TCTTACATCACCGGCCAAAC 58.184 50.000 0.00 0.00 0.00 2.93
2151 2729 2.234168 CCATTTGCATTGATGGTGGTCA 59.766 45.455 13.38 0.00 38.38 4.02
2172 2750 6.404734 GGTCAAACCATTAGTTCTTAGCCATG 60.405 42.308 0.00 0.00 37.88 3.66
2177 2755 6.426587 ACCATTAGTTCTTAGCCATGAACAT 58.573 36.000 12.20 2.39 43.38 2.71
2181 2759 8.680903 CATTAGTTCTTAGCCATGAACATCTTT 58.319 33.333 12.20 0.00 43.38 2.52
2331 2909 9.756571 AACACCCCACTTGTATAAACAATATTA 57.243 29.630 0.00 0.00 44.43 0.98
2427 3016 9.779237 GAATCAGTACAATACGAAATATGTTCG 57.221 33.333 14.42 14.42 46.36 3.95
2497 3086 5.641709 CACACACGAACTCTCAGTACATAT 58.358 41.667 0.00 0.00 0.00 1.78
2498 3087 6.677187 GCACACACGAACTCTCAGTACATATA 60.677 42.308 0.00 0.00 0.00 0.86
2499 3088 7.418408 CACACACGAACTCTCAGTACATATAT 58.582 38.462 0.00 0.00 0.00 0.86
2500 3089 8.557029 CACACACGAACTCTCAGTACATATATA 58.443 37.037 0.00 0.00 0.00 0.86
2579 3169 6.485171 ACATATAGGGTGCTATGGGAAATTC 58.515 40.000 0.00 0.00 31.07 2.17
2584 3174 3.620488 GGTGCTATGGGAAATTCAGACA 58.380 45.455 0.00 0.00 0.00 3.41
2646 3236 4.207891 ACATGACCCTAAGTTACAGCAG 57.792 45.455 0.00 0.00 0.00 4.24
2697 3289 3.949113 GGACTACTAGTGGAGGTCAAGAG 59.051 52.174 13.86 0.00 0.00 2.85
2736 3328 9.376075 CTGTTGTAGATTTCTCAATGATGTAGT 57.624 33.333 0.00 0.00 0.00 2.73
2829 3421 5.304101 ACAAGGTTTATGTTTTCTGGCATCA 59.696 36.000 0.00 0.00 0.00 3.07
2830 3422 6.014327 ACAAGGTTTATGTTTTCTGGCATCAT 60.014 34.615 0.00 0.00 0.00 2.45
2831 3423 6.610075 AGGTTTATGTTTTCTGGCATCATT 57.390 33.333 0.00 0.00 0.00 2.57
2832 3424 7.716799 AGGTTTATGTTTTCTGGCATCATTA 57.283 32.000 0.00 0.00 0.00 1.90
2833 3425 8.310122 AGGTTTATGTTTTCTGGCATCATTAT 57.690 30.769 0.00 0.00 0.00 1.28
2834 3426 8.761689 AGGTTTATGTTTTCTGGCATCATTATT 58.238 29.630 0.00 0.00 0.00 1.40
2835 3427 9.034544 GGTTTATGTTTTCTGGCATCATTATTC 57.965 33.333 0.00 0.00 0.00 1.75
2836 3428 9.807649 GTTTATGTTTTCTGGCATCATTATTCT 57.192 29.630 0.00 0.00 0.00 2.40
2840 3432 9.729281 ATGTTTTCTGGCATCATTATTCTTTTT 57.271 25.926 0.00 0.00 0.00 1.94
2841 3433 8.991026 TGTTTTCTGGCATCATTATTCTTTTTG 58.009 29.630 0.00 0.00 0.00 2.44
2842 3434 8.992073 GTTTTCTGGCATCATTATTCTTTTTGT 58.008 29.630 0.00 0.00 0.00 2.83
2843 3435 9.558396 TTTTCTGGCATCATTATTCTTTTTGTT 57.442 25.926 0.00 0.00 0.00 2.83
2844 3436 8.537049 TTCTGGCATCATTATTCTTTTTGTTG 57.463 30.769 0.00 0.00 0.00 3.33
2845 3437 7.669427 TCTGGCATCATTATTCTTTTTGTTGT 58.331 30.769 0.00 0.00 0.00 3.32
2846 3438 8.149647 TCTGGCATCATTATTCTTTTTGTTGTT 58.850 29.630 0.00 0.00 0.00 2.83
2847 3439 8.309163 TGGCATCATTATTCTTTTTGTTGTTC 57.691 30.769 0.00 0.00 0.00 3.18
2848 3440 8.149647 TGGCATCATTATTCTTTTTGTTGTTCT 58.850 29.630 0.00 0.00 0.00 3.01
2849 3441 8.992073 GGCATCATTATTCTTTTTGTTGTTCTT 58.008 29.630 0.00 0.00 0.00 2.52
2912 3504 2.421073 TGAATTGCTGTGAGCTATGCAC 59.579 45.455 0.00 0.00 37.14 4.57
2919 3511 3.264947 CTGTGAGCTATGCACTGCTAAA 58.735 45.455 14.21 4.79 39.91 1.85
2920 3512 3.673902 TGTGAGCTATGCACTGCTAAAA 58.326 40.909 14.21 0.96 39.91 1.52
2980 3572 2.488153 GTTCTTAATTCGCTTGCACCCT 59.512 45.455 0.00 0.00 0.00 4.34
3006 3598 4.283467 ACCTGTTGCTGACTATTCACTACA 59.717 41.667 0.00 0.00 0.00 2.74
3008 3600 5.120830 CCTGTTGCTGACTATTCACTACAAC 59.879 44.000 9.92 9.92 36.44 3.32
3010 3602 6.288294 TGTTGCTGACTATTCACTACAACTT 58.712 36.000 14.58 0.00 36.64 2.66
3047 3643 7.730084 TGTTAGACATTGGGATTAGATGAGAG 58.270 38.462 0.00 0.00 0.00 3.20
3050 3646 6.825610 AGACATTGGGATTAGATGAGAGAAC 58.174 40.000 0.00 0.00 0.00 3.01
3051 3647 6.385176 AGACATTGGGATTAGATGAGAGAACA 59.615 38.462 0.00 0.00 0.00 3.18
3054 3653 6.874278 TTGGGATTAGATGAGAGAACAAGA 57.126 37.500 0.00 0.00 0.00 3.02
3086 3685 7.125053 TCAAACTCTTGATTTTGGTACCCTTTT 59.875 33.333 10.07 0.00 36.62 2.27
3128 3728 4.855298 ACTTAATAAGCTACTTGGGGCA 57.145 40.909 0.00 0.00 0.00 5.36
3129 3729 5.187621 ACTTAATAAGCTACTTGGGGCAA 57.812 39.130 0.00 0.00 0.00 4.52
3130 3730 4.948004 ACTTAATAAGCTACTTGGGGCAAC 59.052 41.667 0.00 0.00 0.00 4.17
3131 3731 3.449746 AATAAGCTACTTGGGGCAACA 57.550 42.857 0.00 0.00 39.74 3.33
3132 3732 3.669939 ATAAGCTACTTGGGGCAACAT 57.330 42.857 0.00 0.00 39.74 2.71
3133 3733 1.839424 AAGCTACTTGGGGCAACATC 58.161 50.000 0.00 0.00 39.74 3.06
3134 3734 0.995024 AGCTACTTGGGGCAACATCT 59.005 50.000 0.00 0.00 39.74 2.90
3135 3735 1.355720 AGCTACTTGGGGCAACATCTT 59.644 47.619 0.00 0.00 39.74 2.40
3136 3736 1.474077 GCTACTTGGGGCAACATCTTG 59.526 52.381 0.00 0.00 39.74 3.02
3137 3737 2.795329 CTACTTGGGGCAACATCTTGT 58.205 47.619 0.00 0.00 39.74 3.16
3138 3738 2.969821 ACTTGGGGCAACATCTTGTA 57.030 45.000 0.00 0.00 39.74 2.41
3139 3739 2.514803 ACTTGGGGCAACATCTTGTAC 58.485 47.619 0.00 0.00 39.74 2.90
3140 3740 2.158534 ACTTGGGGCAACATCTTGTACA 60.159 45.455 0.00 0.00 39.74 2.90
3141 3741 2.198827 TGGGGCAACATCTTGTACAG 57.801 50.000 0.00 0.00 39.74 2.74
3142 3742 1.702401 TGGGGCAACATCTTGTACAGA 59.298 47.619 0.00 0.00 39.74 3.41
3143 3743 2.290260 TGGGGCAACATCTTGTACAGAG 60.290 50.000 0.00 0.00 33.87 3.35
3144 3744 2.290323 GGGGCAACATCTTGTACAGAGT 60.290 50.000 0.00 0.00 33.87 3.24
3145 3745 3.412386 GGGCAACATCTTGTACAGAGTT 58.588 45.455 0.00 0.00 33.87 3.01
3146 3746 4.564821 GGGGCAACATCTTGTACAGAGTTA 60.565 45.833 0.00 0.00 33.87 2.24
3147 3747 5.001232 GGGCAACATCTTGTACAGAGTTAA 58.999 41.667 0.00 0.00 33.87 2.01
3148 3748 5.648092 GGGCAACATCTTGTACAGAGTTAAT 59.352 40.000 0.00 0.00 33.87 1.40
3149 3749 6.183360 GGGCAACATCTTGTACAGAGTTAATC 60.183 42.308 0.00 0.00 33.87 1.75
3150 3750 6.371548 GGCAACATCTTGTACAGAGTTAATCA 59.628 38.462 0.00 0.00 33.87 2.57
3151 3751 7.094805 GGCAACATCTTGTACAGAGTTAATCAA 60.095 37.037 0.00 0.00 33.87 2.57
3152 3752 7.746475 GCAACATCTTGTACAGAGTTAATCAAC 59.254 37.037 0.00 0.00 33.87 3.18
3153 3753 7.907214 ACATCTTGTACAGAGTTAATCAACC 57.093 36.000 0.00 0.00 33.87 3.77
3154 3754 6.590292 ACATCTTGTACAGAGTTAATCAACCG 59.410 38.462 0.00 0.00 33.87 4.44
3155 3755 5.475719 TCTTGTACAGAGTTAATCAACCGG 58.524 41.667 0.00 0.00 35.05 5.28
3156 3756 5.244402 TCTTGTACAGAGTTAATCAACCGGA 59.756 40.000 9.46 0.00 35.05 5.14
3157 3757 5.471556 TGTACAGAGTTAATCAACCGGAA 57.528 39.130 9.46 0.00 35.05 4.30
3158 3758 5.232463 TGTACAGAGTTAATCAACCGGAAC 58.768 41.667 9.46 0.00 35.05 3.62
3159 3759 4.345859 ACAGAGTTAATCAACCGGAACA 57.654 40.909 9.46 0.00 35.05 3.18
3160 3760 4.062991 ACAGAGTTAATCAACCGGAACAC 58.937 43.478 9.46 0.00 35.05 3.32
3161 3761 4.062293 CAGAGTTAATCAACCGGAACACA 58.938 43.478 9.46 0.00 35.05 3.72
3162 3762 4.513692 CAGAGTTAATCAACCGGAACACAA 59.486 41.667 9.46 0.00 35.05 3.33
3163 3763 5.181245 CAGAGTTAATCAACCGGAACACAAT 59.819 40.000 9.46 0.00 35.05 2.71
3164 3764 6.370442 CAGAGTTAATCAACCGGAACACAATA 59.630 38.462 9.46 0.00 35.05 1.90
3165 3765 6.370718 AGAGTTAATCAACCGGAACACAATAC 59.629 38.462 9.46 0.00 35.05 1.89
3166 3766 5.998981 AGTTAATCAACCGGAACACAATACA 59.001 36.000 9.46 0.00 35.05 2.29
3167 3767 6.487331 AGTTAATCAACCGGAACACAATACAA 59.513 34.615 9.46 0.00 35.05 2.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.071892 ACCAGGGAACGTCAAATTGAGTA 59.928 43.478 0.00 0.00 0.00 2.59
1 2 2.158667 ACCAGGGAACGTCAAATTGAGT 60.159 45.455 0.00 0.00 0.00 3.41
2 3 2.504367 ACCAGGGAACGTCAAATTGAG 58.496 47.619 0.00 0.00 0.00 3.02
3 4 2.649531 ACCAGGGAACGTCAAATTGA 57.350 45.000 0.00 0.00 0.00 2.57
4 5 3.726291 AAACCAGGGAACGTCAAATTG 57.274 42.857 0.00 0.00 0.00 2.32
5 6 5.650703 CCTATAAACCAGGGAACGTCAAATT 59.349 40.000 0.00 0.00 0.00 1.82
6 7 5.045432 TCCTATAAACCAGGGAACGTCAAAT 60.045 40.000 0.00 0.00 33.66 2.32
7 8 4.286549 TCCTATAAACCAGGGAACGTCAAA 59.713 41.667 0.00 0.00 33.66 2.69
8 9 3.839490 TCCTATAAACCAGGGAACGTCAA 59.161 43.478 0.00 0.00 33.66 3.18
9 10 3.443052 TCCTATAAACCAGGGAACGTCA 58.557 45.455 0.00 0.00 33.66 4.35
10 11 3.450096 ACTCCTATAAACCAGGGAACGTC 59.550 47.826 0.00 0.00 33.66 4.34
11 12 3.447950 ACTCCTATAAACCAGGGAACGT 58.552 45.455 0.00 0.00 33.66 3.99
12 13 4.648307 ACTACTCCTATAAACCAGGGAACG 59.352 45.833 0.00 0.00 33.66 3.95
13 14 6.070366 ACAACTACTCCTATAAACCAGGGAAC 60.070 42.308 0.00 0.00 33.66 3.62
14 15 6.027482 ACAACTACTCCTATAAACCAGGGAA 58.973 40.000 0.00 0.00 33.66 3.97
15 16 5.596763 ACAACTACTCCTATAAACCAGGGA 58.403 41.667 0.00 0.00 33.66 4.20
16 17 5.952347 ACAACTACTCCTATAAACCAGGG 57.048 43.478 0.00 0.00 33.66 4.45
17 18 6.837568 TCCTACAACTACTCCTATAAACCAGG 59.162 42.308 0.00 0.00 34.20 4.45
18 19 7.893124 TCCTACAACTACTCCTATAAACCAG 57.107 40.000 0.00 0.00 0.00 4.00
19 20 8.534496 GTTTCCTACAACTACTCCTATAAACCA 58.466 37.037 0.00 0.00 0.00 3.67
20 21 7.984050 GGTTTCCTACAACTACTCCTATAAACC 59.016 40.741 0.00 0.00 35.63 3.27
21 22 8.534496 TGGTTTCCTACAACTACTCCTATAAAC 58.466 37.037 0.00 0.00 0.00 2.01
22 23 8.669055 TGGTTTCCTACAACTACTCCTATAAA 57.331 34.615 0.00 0.00 0.00 1.40
23 24 8.669055 TTGGTTTCCTACAACTACTCCTATAA 57.331 34.615 0.00 0.00 0.00 0.98
24 25 8.849543 ATTGGTTTCCTACAACTACTCCTATA 57.150 34.615 0.00 0.00 0.00 1.31
25 26 7.750947 ATTGGTTTCCTACAACTACTCCTAT 57.249 36.000 0.00 0.00 0.00 2.57
26 27 7.236019 TCAATTGGTTTCCTACAACTACTCCTA 59.764 37.037 5.42 0.00 0.00 2.94
27 28 6.043938 TCAATTGGTTTCCTACAACTACTCCT 59.956 38.462 5.42 0.00 0.00 3.69
28 29 6.235664 TCAATTGGTTTCCTACAACTACTCC 58.764 40.000 5.42 0.00 0.00 3.85
29 30 7.606456 TGATCAATTGGTTTCCTACAACTACTC 59.394 37.037 5.42 0.00 0.00 2.59
30 31 7.390718 GTGATCAATTGGTTTCCTACAACTACT 59.609 37.037 5.42 0.00 0.00 2.57
31 32 7.174253 TGTGATCAATTGGTTTCCTACAACTAC 59.826 37.037 5.42 0.00 0.00 2.73
32 33 7.227873 TGTGATCAATTGGTTTCCTACAACTA 58.772 34.615 5.42 0.00 0.00 2.24
33 34 6.068010 TGTGATCAATTGGTTTCCTACAACT 58.932 36.000 5.42 0.00 0.00 3.16
34 35 6.325919 TGTGATCAATTGGTTTCCTACAAC 57.674 37.500 5.42 0.00 0.00 3.32
35 36 6.968263 TTGTGATCAATTGGTTTCCTACAA 57.032 33.333 5.42 4.36 0.00 2.41
48 49 5.589855 TGAGTCCGCATTAATTGTGATCAAT 59.410 36.000 0.00 0.00 44.94 2.57
49 50 4.940654 TGAGTCCGCATTAATTGTGATCAA 59.059 37.500 0.00 0.00 38.12 2.57
50 51 4.332543 GTGAGTCCGCATTAATTGTGATCA 59.667 41.667 0.00 0.00 38.12 2.92
51 52 4.550831 CGTGAGTCCGCATTAATTGTGATC 60.551 45.833 0.00 0.00 38.12 2.92
52 53 3.309682 CGTGAGTCCGCATTAATTGTGAT 59.690 43.478 0.00 0.00 38.12 3.06
53 54 2.670905 CGTGAGTCCGCATTAATTGTGA 59.329 45.455 0.00 0.00 38.12 3.58
54 55 3.038352 CGTGAGTCCGCATTAATTGTG 57.962 47.619 0.00 0.00 35.52 3.33
90 91 1.202486 ACACCGGGCATGATAACGTAG 60.202 52.381 6.32 0.00 0.00 3.51
91 92 0.825410 ACACCGGGCATGATAACGTA 59.175 50.000 6.32 0.00 0.00 3.57
92 93 0.035820 AACACCGGGCATGATAACGT 60.036 50.000 6.32 0.00 0.00 3.99
93 94 0.376852 CAACACCGGGCATGATAACG 59.623 55.000 6.32 0.00 0.00 3.18
94 95 1.459450 ACAACACCGGGCATGATAAC 58.541 50.000 6.32 0.00 0.00 1.89
95 96 2.237643 AGTACAACACCGGGCATGATAA 59.762 45.455 6.32 0.00 0.00 1.75
96 97 1.834896 AGTACAACACCGGGCATGATA 59.165 47.619 6.32 0.00 0.00 2.15
97 98 0.618458 AGTACAACACCGGGCATGAT 59.382 50.000 6.32 0.00 0.00 2.45
98 99 0.321210 CAGTACAACACCGGGCATGA 60.321 55.000 6.32 0.00 0.00 3.07
99 100 1.922135 GCAGTACAACACCGGGCATG 61.922 60.000 6.32 3.44 0.00 4.06
100 101 1.674322 GCAGTACAACACCGGGCAT 60.674 57.895 6.32 0.00 0.00 4.40
101 102 2.281208 GCAGTACAACACCGGGCA 60.281 61.111 6.32 0.00 0.00 5.36
102 103 3.053896 GGCAGTACAACACCGGGC 61.054 66.667 6.32 0.00 0.00 6.13
103 104 1.671054 CTGGCAGTACAACACCGGG 60.671 63.158 6.32 0.00 0.00 5.73
104 105 0.036388 ATCTGGCAGTACAACACCGG 60.036 55.000 15.27 0.00 0.00 5.28
105 106 1.359848 GATCTGGCAGTACAACACCG 58.640 55.000 15.27 0.00 0.00 4.94
106 107 1.739067 GGATCTGGCAGTACAACACC 58.261 55.000 15.27 5.21 0.00 4.16
107 108 1.067142 TCGGATCTGGCAGTACAACAC 60.067 52.381 15.27 0.00 0.00 3.32
108 109 1.262417 TCGGATCTGGCAGTACAACA 58.738 50.000 15.27 0.00 0.00 3.33
109 110 2.205074 CATCGGATCTGGCAGTACAAC 58.795 52.381 15.27 2.90 0.00 3.32
110 111 1.138859 CCATCGGATCTGGCAGTACAA 59.861 52.381 15.27 0.00 0.00 2.41
111 112 0.752658 CCATCGGATCTGGCAGTACA 59.247 55.000 15.27 0.00 0.00 2.90
112 113 3.595691 CCATCGGATCTGGCAGTAC 57.404 57.895 15.27 9.53 0.00 2.73
118 119 2.111878 GGTGGCCATCGGATCTGG 59.888 66.667 9.72 0.00 36.81 3.86
119 120 2.280389 CGGTGGCCATCGGATCTG 60.280 66.667 31.13 6.88 0.00 2.90
120 121 2.764128 ACGGTGGCCATCGGATCT 60.764 61.111 39.43 18.53 39.68 2.75
121 122 2.588877 CACGGTGGCCATCGGATC 60.589 66.667 39.43 12.04 39.68 3.36
122 123 2.478335 AAACACGGTGGCCATCGGAT 62.478 55.000 39.43 25.46 39.68 4.18
123 124 3.185299 AAACACGGTGGCCATCGGA 62.185 57.895 39.43 0.00 39.68 4.55
124 125 2.671619 AAACACGGTGGCCATCGG 60.672 61.111 39.43 29.46 39.68 4.18
125 126 2.686816 GGAAACACGGTGGCCATCG 61.687 63.158 36.13 36.13 41.46 3.84
126 127 1.602323 TGGAAACACGGTGGCCATC 60.602 57.895 9.72 7.61 33.40 3.51
127 128 2.518426 TGGAAACACGGTGGCCAT 59.482 55.556 9.72 0.00 33.40 4.40
147 148 3.597255 TCAGACTAGTCACAGACCGTAG 58.403 50.000 24.44 2.03 32.18 3.51
148 149 3.690475 TCAGACTAGTCACAGACCGTA 57.310 47.619 24.44 0.00 32.18 4.02
149 150 2.563261 TCAGACTAGTCACAGACCGT 57.437 50.000 24.44 0.00 32.18 4.83
150 151 4.816925 TCATATCAGACTAGTCACAGACCG 59.183 45.833 24.44 10.76 32.18 4.79
151 152 5.277586 CGTCATATCAGACTAGTCACAGACC 60.278 48.000 24.44 4.82 36.38 3.85
152 153 5.743467 CGTCATATCAGACTAGTCACAGAC 58.257 45.833 24.44 18.73 36.38 3.51
153 154 4.273724 GCGTCATATCAGACTAGTCACAGA 59.726 45.833 24.44 18.05 36.38 3.41
154 155 4.035675 TGCGTCATATCAGACTAGTCACAG 59.964 45.833 24.44 13.59 36.38 3.66
155 156 3.945285 TGCGTCATATCAGACTAGTCACA 59.055 43.478 24.44 10.70 36.38 3.58
156 157 4.553756 TGCGTCATATCAGACTAGTCAC 57.446 45.455 24.44 10.88 36.38 3.67
157 158 4.036852 CCTTGCGTCATATCAGACTAGTCA 59.963 45.833 24.44 5.48 36.38 3.41
158 159 4.541779 CCTTGCGTCATATCAGACTAGTC 58.458 47.826 15.41 15.41 36.38 2.59
159 160 3.319405 CCCTTGCGTCATATCAGACTAGT 59.681 47.826 0.00 0.00 36.38 2.57
160 161 3.570125 TCCCTTGCGTCATATCAGACTAG 59.430 47.826 0.00 0.00 36.38 2.57
161 162 3.562182 TCCCTTGCGTCATATCAGACTA 58.438 45.455 0.00 0.00 36.38 2.59
162 163 2.388735 TCCCTTGCGTCATATCAGACT 58.611 47.619 0.00 0.00 36.38 3.24
163 164 2.890808 TCCCTTGCGTCATATCAGAC 57.109 50.000 0.00 0.00 35.19 3.51
164 165 2.965147 TGATCCCTTGCGTCATATCAGA 59.035 45.455 0.00 0.00 0.00 3.27
165 166 3.244009 ACTGATCCCTTGCGTCATATCAG 60.244 47.826 13.51 13.51 43.71 2.90
166 167 2.700371 ACTGATCCCTTGCGTCATATCA 59.300 45.455 0.00 0.00 0.00 2.15
167 168 3.393089 ACTGATCCCTTGCGTCATATC 57.607 47.619 0.00 0.00 0.00 1.63
168 169 3.898123 ACTACTGATCCCTTGCGTCATAT 59.102 43.478 0.00 0.00 0.00 1.78
169 170 3.296854 ACTACTGATCCCTTGCGTCATA 58.703 45.455 0.00 0.00 0.00 2.15
170 171 2.101582 GACTACTGATCCCTTGCGTCAT 59.898 50.000 0.00 0.00 0.00 3.06
171 172 1.476891 GACTACTGATCCCTTGCGTCA 59.523 52.381 0.00 0.00 0.00 4.35
172 173 1.751924 AGACTACTGATCCCTTGCGTC 59.248 52.381 0.00 0.00 0.00 5.19
173 174 1.478510 CAGACTACTGATCCCTTGCGT 59.521 52.381 0.00 0.00 46.03 5.24
174 175 1.751351 TCAGACTACTGATCCCTTGCG 59.249 52.381 0.00 0.00 46.55 4.85
184 185 4.980573 AGCTACTAGGGATCAGACTACTG 58.019 47.826 0.00 0.00 44.66 2.74
185 186 4.042435 GGAGCTACTAGGGATCAGACTACT 59.958 50.000 0.00 0.00 0.00 2.57
186 187 4.329392 GGAGCTACTAGGGATCAGACTAC 58.671 52.174 0.00 0.00 0.00 2.73
187 188 3.331294 GGGAGCTACTAGGGATCAGACTA 59.669 52.174 0.00 0.00 0.00 2.59
188 189 2.109304 GGGAGCTACTAGGGATCAGACT 59.891 54.545 0.00 0.00 0.00 3.24
189 190 2.158445 TGGGAGCTACTAGGGATCAGAC 60.158 54.545 0.00 0.00 0.00 3.51
190 191 2.144450 TGGGAGCTACTAGGGATCAGA 58.856 52.381 0.00 0.00 0.00 3.27
191 192 2.158385 AGTGGGAGCTACTAGGGATCAG 60.158 54.545 0.00 0.00 0.00 2.90
192 193 1.860240 AGTGGGAGCTACTAGGGATCA 59.140 52.381 0.00 0.00 0.00 2.92
193 194 2.687003 AGTGGGAGCTACTAGGGATC 57.313 55.000 0.00 0.00 0.00 3.36
194 195 3.423058 AAAGTGGGAGCTACTAGGGAT 57.577 47.619 0.00 0.00 0.00 3.85
195 196 2.942604 AAAGTGGGAGCTACTAGGGA 57.057 50.000 0.00 0.00 0.00 4.20
196 197 4.031611 AGTTAAAGTGGGAGCTACTAGGG 58.968 47.826 0.00 0.00 0.00 3.53
197 198 5.420409 CAAGTTAAAGTGGGAGCTACTAGG 58.580 45.833 0.00 0.00 0.00 3.02
198 199 4.870991 GCAAGTTAAAGTGGGAGCTACTAG 59.129 45.833 0.00 0.00 0.00 2.57
199 200 4.530946 AGCAAGTTAAAGTGGGAGCTACTA 59.469 41.667 0.00 0.00 0.00 1.82
200 201 3.328050 AGCAAGTTAAAGTGGGAGCTACT 59.672 43.478 0.00 0.00 0.00 2.57
201 202 3.437049 CAGCAAGTTAAAGTGGGAGCTAC 59.563 47.826 0.00 0.00 0.00 3.58
202 203 3.072476 ACAGCAAGTTAAAGTGGGAGCTA 59.928 43.478 0.00 0.00 0.00 3.32
203 204 2.158608 ACAGCAAGTTAAAGTGGGAGCT 60.159 45.455 0.00 0.00 0.00 4.09
204 205 2.030805 CACAGCAAGTTAAAGTGGGAGC 60.031 50.000 0.00 0.00 0.00 4.70
205 206 3.214328 ACACAGCAAGTTAAAGTGGGAG 58.786 45.455 0.00 0.00 34.65 4.30
206 207 3.290948 ACACAGCAAGTTAAAGTGGGA 57.709 42.857 0.00 0.00 34.65 4.37
207 208 4.385358 AAACACAGCAAGTTAAAGTGGG 57.615 40.909 0.00 0.00 34.65 4.61
208 209 8.419076 AATTAAAACACAGCAAGTTAAAGTGG 57.581 30.769 0.00 0.00 34.65 4.00
209 210 9.687717 CAAATTAAAACACAGCAAGTTAAAGTG 57.312 29.630 0.00 0.00 36.34 3.16
210 211 9.430623 ACAAATTAAAACACAGCAAGTTAAAGT 57.569 25.926 0.00 0.00 0.00 2.66
211 212 9.687717 CACAAATTAAAACACAGCAAGTTAAAG 57.312 29.630 0.00 0.00 0.00 1.85
282 284 3.369546 AAACTTGGCATTGTGCTACAC 57.630 42.857 1.64 0.00 44.28 2.90
356 366 4.512914 GCCACTGCCATCTCCCCC 62.513 72.222 0.00 0.00 0.00 5.40
357 367 3.415087 AGCCACTGCCATCTCCCC 61.415 66.667 0.00 0.00 38.69 4.81
358 368 2.124403 CAGCCACTGCCATCTCCC 60.124 66.667 0.00 0.00 38.69 4.30
359 369 2.124403 CCAGCCACTGCCATCTCC 60.124 66.667 0.00 0.00 38.69 3.71
384 394 3.086600 CCACCTCTCCTCCCTGCC 61.087 72.222 0.00 0.00 0.00 4.85
492 518 2.829003 CGGAGGGAGTAGCTGCGA 60.829 66.667 0.00 0.00 33.90 5.10
501 527 1.755380 AGTAATTCCGAACGGAGGGAG 59.245 52.381 15.34 0.00 46.06 4.30
503 529 2.277084 CAAGTAATTCCGAACGGAGGG 58.723 52.381 15.34 0.00 46.06 4.30
504 530 2.928116 GACAAGTAATTCCGAACGGAGG 59.072 50.000 15.34 4.52 46.06 4.30
508 534 3.495193 TCGAGACAAGTAATTCCGAACG 58.505 45.455 0.00 0.00 0.00 3.95
511 537 5.350365 CCATTTTCGAGACAAGTAATTCCGA 59.650 40.000 0.00 0.00 0.00 4.55
512 538 5.350365 TCCATTTTCGAGACAAGTAATTCCG 59.650 40.000 0.00 0.00 0.00 4.30
513 539 6.737254 TCCATTTTCGAGACAAGTAATTCC 57.263 37.500 0.00 0.00 0.00 3.01
515 541 7.687941 ACATCCATTTTCGAGACAAGTAATT 57.312 32.000 0.00 0.00 0.00 1.40
519 545 6.644347 AGATACATCCATTTTCGAGACAAGT 58.356 36.000 0.00 0.00 0.00 3.16
520 546 8.138074 TCTAGATACATCCATTTTCGAGACAAG 58.862 37.037 0.00 0.00 0.00 3.16
522 548 7.582667 TCTAGATACATCCATTTTCGAGACA 57.417 36.000 0.00 0.00 0.00 3.41
523 549 7.113684 CGTTCTAGATACATCCATTTTCGAGAC 59.886 40.741 0.00 0.00 0.00 3.36
524 550 7.139392 CGTTCTAGATACATCCATTTTCGAGA 58.861 38.462 0.00 0.00 0.00 4.04
525 551 6.918569 ACGTTCTAGATACATCCATTTTCGAG 59.081 38.462 0.00 0.00 0.00 4.04
526 552 6.802608 ACGTTCTAGATACATCCATTTTCGA 58.197 36.000 0.00 0.00 0.00 3.71
527 553 7.435488 AGAACGTTCTAGATACATCCATTTTCG 59.565 37.037 28.80 0.00 35.34 3.46
528 554 8.649973 AGAACGTTCTAGATACATCCATTTTC 57.350 34.615 28.80 0.00 35.34 2.29
544 570 7.435488 CGAAAATGGATGTATCTAGAACGTTCT 59.565 37.037 31.70 31.70 41.24 3.01
545 571 7.434307 TCGAAAATGGATGTATCTAGAACGTTC 59.566 37.037 20.71 20.71 0.00 3.95
546 572 7.262772 TCGAAAATGGATGTATCTAGAACGTT 58.737 34.615 0.00 0.00 0.00 3.99
547 573 6.802608 TCGAAAATGGATGTATCTAGAACGT 58.197 36.000 0.00 0.00 0.00 3.99
549 575 7.921214 TGTCTCGAAAATGGATGTATCTAGAAC 59.079 37.037 0.00 0.00 0.00 3.01
550 576 8.007405 TGTCTCGAAAATGGATGTATCTAGAA 57.993 34.615 0.00 0.00 0.00 2.10
551 577 7.582667 TGTCTCGAAAATGGATGTATCTAGA 57.417 36.000 0.00 0.00 0.00 2.43
552 578 7.923344 ACTTGTCTCGAAAATGGATGTATCTAG 59.077 37.037 0.00 0.00 0.00 2.43
553 579 7.782049 ACTTGTCTCGAAAATGGATGTATCTA 58.218 34.615 0.00 0.00 0.00 1.98
554 580 6.644347 ACTTGTCTCGAAAATGGATGTATCT 58.356 36.000 0.00 0.00 0.00 1.98
555 581 6.910536 ACTTGTCTCGAAAATGGATGTATC 57.089 37.500 0.00 0.00 0.00 2.24
556 582 8.964476 ATTACTTGTCTCGAAAATGGATGTAT 57.036 30.769 0.00 0.00 0.00 2.29
557 583 8.786826 AATTACTTGTCTCGAAAATGGATGTA 57.213 30.769 0.00 0.00 0.00 2.29
558 584 7.148239 GGAATTACTTGTCTCGAAAATGGATGT 60.148 37.037 0.00 0.00 0.00 3.06
559 585 7.189512 GGAATTACTTGTCTCGAAAATGGATG 58.810 38.462 0.00 0.00 0.00 3.51
560 586 6.037172 CGGAATTACTTGTCTCGAAAATGGAT 59.963 38.462 0.00 0.00 0.00 3.41
561 587 5.350365 CGGAATTACTTGTCTCGAAAATGGA 59.650 40.000 0.00 0.00 0.00 3.41
562 588 5.350365 TCGGAATTACTTGTCTCGAAAATGG 59.650 40.000 0.00 0.00 0.00 3.16
563 589 6.403333 TCGGAATTACTTGTCTCGAAAATG 57.597 37.500 0.00 0.00 0.00 2.32
564 590 6.400727 CGTTCGGAATTACTTGTCTCGAAAAT 60.401 38.462 0.00 0.00 37.00 1.82
565 591 5.107760 CGTTCGGAATTACTTGTCTCGAAAA 60.108 40.000 0.00 0.00 37.00 2.29
566 592 4.383649 CGTTCGGAATTACTTGTCTCGAAA 59.616 41.667 0.00 0.00 37.00 3.46
567 593 3.916172 CGTTCGGAATTACTTGTCTCGAA 59.084 43.478 0.00 0.00 33.66 3.71
568 594 3.495193 CGTTCGGAATTACTTGTCTCGA 58.505 45.455 0.00 0.00 0.00 4.04
569 595 2.597305 CCGTTCGGAATTACTTGTCTCG 59.403 50.000 5.19 0.00 0.00 4.04
570 596 3.841643 TCCGTTCGGAATTACTTGTCTC 58.158 45.455 11.66 0.00 0.00 3.36
571 597 3.368116 CCTCCGTTCGGAATTACTTGTCT 60.368 47.826 14.79 0.00 33.41 3.41
572 598 2.928116 CCTCCGTTCGGAATTACTTGTC 59.072 50.000 14.79 0.00 33.41 3.18
573 599 2.354403 CCCTCCGTTCGGAATTACTTGT 60.354 50.000 14.79 0.00 33.41 3.16
574 600 2.093869 TCCCTCCGTTCGGAATTACTTG 60.094 50.000 14.79 1.97 33.41 3.16
575 601 2.167900 CTCCCTCCGTTCGGAATTACTT 59.832 50.000 14.79 0.00 33.41 2.24
576 602 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
577 603 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
578 604 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
579 605 1.755380 CTACTCCCTCCGTTCGGAATT 59.245 52.381 14.79 0.00 33.41 2.17
580 606 1.341778 ACTACTCCCTCCGTTCGGAAT 60.342 52.381 14.79 2.09 33.41 3.01
581 607 0.038744 ACTACTCCCTCCGTTCGGAA 59.961 55.000 14.79 0.04 33.41 4.30
582 608 0.911769 TACTACTCCCTCCGTTCGGA 59.088 55.000 13.34 13.34 0.00 4.55
583 609 1.878734 GATACTACTCCCTCCGTTCGG 59.121 57.143 4.74 4.74 0.00 4.30
584 610 2.848691 AGATACTACTCCCTCCGTTCG 58.151 52.381 0.00 0.00 0.00 3.95
585 611 5.375773 ACTAAGATACTACTCCCTCCGTTC 58.624 45.833 0.00 0.00 0.00 3.95
586 612 5.385628 ACTAAGATACTACTCCCTCCGTT 57.614 43.478 0.00 0.00 0.00 4.44
587 613 6.501453 AGATACTAAGATACTACTCCCTCCGT 59.499 42.308 0.00 0.00 0.00 4.69
588 614 6.949715 AGATACTAAGATACTACTCCCTCCG 58.050 44.000 0.00 0.00 0.00 4.63
589 615 7.920227 TGAGATACTAAGATACTACTCCCTCC 58.080 42.308 0.00 0.00 0.00 4.30
590 616 9.969001 ATTGAGATACTAAGATACTACTCCCTC 57.031 37.037 0.00 0.00 0.00 4.30
599 625 9.482627 CCAGGACAAATTGAGATACTAAGATAC 57.517 37.037 0.00 0.00 0.00 2.24
600 626 9.434275 TCCAGGACAAATTGAGATACTAAGATA 57.566 33.333 0.00 0.00 0.00 1.98
601 627 8.207545 GTCCAGGACAAATTGAGATACTAAGAT 58.792 37.037 15.43 0.00 32.09 2.40
602 628 7.400339 AGTCCAGGACAAATTGAGATACTAAGA 59.600 37.037 22.31 0.00 34.60 2.10
603 629 7.560368 AGTCCAGGACAAATTGAGATACTAAG 58.440 38.462 22.31 0.00 34.60 2.18
604 630 7.496346 AGTCCAGGACAAATTGAGATACTAA 57.504 36.000 22.31 0.00 34.60 2.24
605 631 8.059461 TCTAGTCCAGGACAAATTGAGATACTA 58.941 37.037 22.31 0.00 34.60 1.82
606 632 6.897966 TCTAGTCCAGGACAAATTGAGATACT 59.102 38.462 22.31 0.00 34.60 2.12
607 633 6.981559 GTCTAGTCCAGGACAAATTGAGATAC 59.018 42.308 22.31 1.69 34.60 2.24
608 634 6.667848 TGTCTAGTCCAGGACAAATTGAGATA 59.332 38.462 22.31 9.07 39.16 1.98
624 650 1.539065 CCACGATGGCATGTCTAGTCC 60.539 57.143 3.81 0.00 0.00 3.85
751 777 2.029918 CACCGAGACATCACAGACAGAA 60.030 50.000 0.00 0.00 0.00 3.02
806 832 1.262950 CTTGCCGTCGAATGTTTGTCA 59.737 47.619 0.00 0.00 0.00 3.58
814 840 1.805945 GTCGAGCTTGCCGTCGAAT 60.806 57.895 8.19 0.00 46.18 3.34
850 876 5.885230 TCAGAGCTGAATATTGGTTGTTG 57.115 39.130 0.00 0.00 36.53 3.33
902 1042 7.489113 GCATTACATACACAAAGCTAGCAATTT 59.511 33.333 18.83 6.82 0.00 1.82
914 1054 6.566197 TGTTCACATGCATTACATACACAA 57.434 33.333 0.00 0.00 36.64 3.33
918 1058 6.035217 TGCATTGTTCACATGCATTACATAC 58.965 36.000 0.00 0.00 45.14 2.39
930 1121 1.340088 ATTGCCCTGCATTGTTCACA 58.660 45.000 0.00 0.00 38.76 3.58
963 1154 2.100031 CGCCGTACATTCAGCAGCA 61.100 57.895 0.00 0.00 0.00 4.41
1269 1510 9.832445 AGCTAAGACTCCATTTAAATCGAATTA 57.168 29.630 0.00 0.00 0.00 1.40
1405 1670 6.834107 TCCCACATAATTTTAGCTAGGTACC 58.166 40.000 2.73 2.73 0.00 3.34
1406 1671 7.606839 GGATCCCACATAATTTTAGCTAGGTAC 59.393 40.741 0.00 0.00 0.00 3.34
1433 1698 5.714863 AGAGAGAGAGAGAGAGAGAGAGAT 58.285 45.833 0.00 0.00 0.00 2.75
1441 1706 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1442 1707 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1443 1708 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1444 1709 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
1445 1710 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
1446 1711 5.136068 AGAGAGAGAGAGAGAGAGAGAGA 57.864 47.826 0.00 0.00 0.00 3.10
1447 1712 4.280677 GGAGAGAGAGAGAGAGAGAGAGAG 59.719 54.167 0.00 0.00 0.00 3.20
1448 1713 4.219115 GGAGAGAGAGAGAGAGAGAGAGA 58.781 52.174 0.00 0.00 0.00 3.10
1449 1714 3.963374 TGGAGAGAGAGAGAGAGAGAGAG 59.037 52.174 0.00 0.00 0.00 3.20
1450 1715 3.994317 TGGAGAGAGAGAGAGAGAGAGA 58.006 50.000 0.00 0.00 0.00 3.10
1451 1716 4.504514 CCATGGAGAGAGAGAGAGAGAGAG 60.505 54.167 5.56 0.00 0.00 3.20
1452 1717 3.392285 CCATGGAGAGAGAGAGAGAGAGA 59.608 52.174 5.56 0.00 0.00 3.10
1453 1718 3.137176 ACCATGGAGAGAGAGAGAGAGAG 59.863 52.174 21.47 0.00 0.00 3.20
1454 1719 3.122480 ACCATGGAGAGAGAGAGAGAGA 58.878 50.000 21.47 0.00 0.00 3.10
1455 1720 3.582998 ACCATGGAGAGAGAGAGAGAG 57.417 52.381 21.47 0.00 0.00 3.20
1456 1721 5.372363 AGATAACCATGGAGAGAGAGAGAGA 59.628 44.000 21.47 0.00 0.00 3.10
1457 1722 5.634118 AGATAACCATGGAGAGAGAGAGAG 58.366 45.833 21.47 0.00 0.00 3.20
1458 1723 5.661503 AGATAACCATGGAGAGAGAGAGA 57.338 43.478 21.47 0.00 0.00 3.10
1459 1724 6.550854 AGAAAGATAACCATGGAGAGAGAGAG 59.449 42.308 21.47 0.00 0.00 3.20
1460 1725 6.439487 AGAAAGATAACCATGGAGAGAGAGA 58.561 40.000 21.47 0.00 0.00 3.10
1461 1726 6.239289 GGAGAAAGATAACCATGGAGAGAGAG 60.239 46.154 21.47 0.00 0.00 3.20
1462 1727 5.600484 GGAGAAAGATAACCATGGAGAGAGA 59.400 44.000 21.47 0.00 0.00 3.10
1463 1728 5.602145 AGGAGAAAGATAACCATGGAGAGAG 59.398 44.000 21.47 0.00 0.00 3.20
1464 1729 5.533112 AGGAGAAAGATAACCATGGAGAGA 58.467 41.667 21.47 0.00 0.00 3.10
1490 1755 0.648958 GTTCACCGCGCCTACATAAC 59.351 55.000 0.00 0.00 0.00 1.89
1504 1769 2.450609 TTCCTCGTAAGCTGGTTCAC 57.549 50.000 0.00 0.00 33.46 3.18
1533 1798 0.178873 TCTTGTTAGGGGCCCACTCT 60.179 55.000 27.72 14.67 0.00 3.24
1554 1819 4.147322 GCGACGCCATTCACACGG 62.147 66.667 9.14 0.00 0.00 4.94
1739 2004 9.678941 TTACGATCTAGCTATTTTACACATGAG 57.321 33.333 0.00 0.00 0.00 2.90
1762 2027 6.744537 CACTAGTGCTTGCTTCAATCAATTAC 59.255 38.462 10.54 0.00 0.00 1.89
1809 2074 7.991460 TGAGTATAAATCCGTCACTCTCTCTAA 59.009 37.037 0.00 0.00 37.20 2.10
1818 2083 5.975344 TCGTGATTGAGTATAAATCCGTCAC 59.025 40.000 0.00 0.00 31.76 3.67
1821 2086 7.709182 TGAATTCGTGATTGAGTATAAATCCGT 59.291 33.333 0.04 0.00 0.00 4.69
1822 2087 8.072238 TGAATTCGTGATTGAGTATAAATCCG 57.928 34.615 0.04 0.00 0.00 4.18
1984 2562 6.620877 TCTACCTATCAATCCACAACAACT 57.379 37.500 0.00 0.00 0.00 3.16
2130 2708 2.234168 TGACCACCATCAATGCAAATGG 59.766 45.455 19.24 19.24 46.53 3.16
2151 2729 6.719370 TGTTCATGGCTAAGAACTAATGGTTT 59.281 34.615 17.32 0.00 43.38 3.27
2172 2750 4.789095 TTTAGCGGCGATAAAGATGTTC 57.211 40.909 24.48 0.00 0.00 3.18
2177 2755 7.485418 TGAAATTATTTAGCGGCGATAAAGA 57.515 32.000 30.06 25.06 27.06 2.52
2181 2759 7.609760 ATGATGAAATTATTTAGCGGCGATA 57.390 32.000 12.98 5.64 0.00 2.92
2240 2818 3.971245 AGCCTGAAACCTCAAGACTAG 57.029 47.619 0.00 0.00 0.00 2.57
2331 2909 7.022055 TCATATTCACGGCGTCAAAAATATT 57.978 32.000 10.85 0.00 0.00 1.28
2337 2915 4.955925 ATTTCATATTCACGGCGTCAAA 57.044 36.364 10.85 8.36 0.00 2.69
2375 2953 2.236893 TCAGCTCCAGTGCACATCAATA 59.763 45.455 21.04 0.00 34.99 1.90
2427 3016 3.304559 GTGCACATCAGTCTGACGAATAC 59.695 47.826 13.17 0.00 0.00 1.89
2470 3059 0.869880 TGAGAGTTCGTGTGTGCGTG 60.870 55.000 0.00 0.00 0.00 5.34
2497 3086 8.038944 CACTTTGTTTAGGACCACTAAGCTATA 58.961 37.037 0.00 0.00 42.34 1.31
2498 3087 6.879458 CACTTTGTTTAGGACCACTAAGCTAT 59.121 38.462 0.00 0.00 42.34 2.97
2499 3088 6.183361 ACACTTTGTTTAGGACCACTAAGCTA 60.183 38.462 0.00 0.00 42.34 3.32
2500 3089 5.063880 CACTTTGTTTAGGACCACTAAGCT 58.936 41.667 0.00 0.00 42.34 3.74
2579 3169 6.732531 AATACATGTCACTTGTCATGTCTG 57.267 37.500 20.56 0.65 46.41 3.51
2646 3236 4.714308 TGAAAATAATGTTCCACCCATCCC 59.286 41.667 0.00 0.00 0.00 3.85
2746 3338 9.402320 TGCTAAGTTTGAGCCAATATTTACATA 57.598 29.630 0.00 0.00 39.30 2.29
2747 3339 8.292444 TGCTAAGTTTGAGCCAATATTTACAT 57.708 30.769 0.00 0.00 39.30 2.29
2748 3340 7.695480 TGCTAAGTTTGAGCCAATATTTACA 57.305 32.000 0.00 0.00 39.30 2.41
2749 3341 8.244113 ACTTGCTAAGTTTGAGCCAATATTTAC 58.756 33.333 0.00 0.00 39.04 2.01
2750 3342 8.243426 CACTTGCTAAGTTTGAGCCAATATTTA 58.757 33.333 0.00 0.00 40.46 1.40
2751 3343 7.092716 CACTTGCTAAGTTTGAGCCAATATTT 58.907 34.615 0.00 0.00 40.46 1.40
2752 3344 6.624423 CACTTGCTAAGTTTGAGCCAATATT 58.376 36.000 0.00 0.00 40.46 1.28
2861 3453 9.385902 CTATTATTACGTTCCTTCGAATAACGA 57.614 33.333 33.95 21.87 46.66 3.85
2877 3469 9.767684 TCACAGCAATTCAAAACTATTATTACG 57.232 29.630 0.00 0.00 0.00 3.18
2900 3492 4.685169 TTTTTAGCAGTGCATAGCTCAC 57.315 40.909 19.20 0.00 42.05 3.51
2919 3511 3.916989 AGAACTGACAGGGGGTATCTTTT 59.083 43.478 7.51 0.00 0.00 2.27
2920 3512 3.519913 GAGAACTGACAGGGGGTATCTTT 59.480 47.826 7.51 0.00 0.00 2.52
3010 3602 9.575868 TCCCAATGTCTAACAAACTTATTTACA 57.424 29.630 0.00 0.00 0.00 2.41
3026 3618 6.385176 TGTTCTCTCATCTAATCCCAATGTCT 59.615 38.462 0.00 0.00 0.00 3.41
3028 3620 6.566079 TGTTCTCTCATCTAATCCCAATGT 57.434 37.500 0.00 0.00 0.00 2.71
3032 3624 6.441924 AGTTCTTGTTCTCTCATCTAATCCCA 59.558 38.462 0.00 0.00 0.00 4.37
3033 3625 6.883744 AGTTCTTGTTCTCTCATCTAATCCC 58.116 40.000 0.00 0.00 0.00 3.85
3041 3637 6.825721 AGTTTGACAAGTTCTTGTTCTCTCAT 59.174 34.615 17.44 1.80 34.90 2.90
3047 3643 6.842163 TCAAGAGTTTGACAAGTTCTTGTTC 58.158 36.000 26.32 11.40 38.37 3.18
3050 3646 8.589629 CAAAATCAAGAGTTTGACAAGTTCTTG 58.410 33.333 24.04 24.04 45.85 3.02
3051 3647 7.761249 CCAAAATCAAGAGTTTGACAAGTTCTT 59.239 33.333 20.59 9.31 45.85 2.52
3054 3653 6.935167 ACCAAAATCAAGAGTTTGACAAGTT 58.065 32.000 20.59 0.14 45.85 2.66
3128 3728 7.117812 CGGTTGATTAACTCTGTACAAGATGTT 59.882 37.037 10.71 8.93 36.99 2.71
3129 3729 6.590292 CGGTTGATTAACTCTGTACAAGATGT 59.410 38.462 10.71 0.00 36.99 3.06
3130 3730 6.036083 CCGGTTGATTAACTCTGTACAAGATG 59.964 42.308 10.71 0.00 36.99 2.90
3131 3731 6.070995 TCCGGTTGATTAACTCTGTACAAGAT 60.071 38.462 0.00 3.57 36.99 2.40
3132 3732 5.244402 TCCGGTTGATTAACTCTGTACAAGA 59.756 40.000 0.00 4.11 36.99 3.02
3133 3733 5.475719 TCCGGTTGATTAACTCTGTACAAG 58.524 41.667 0.00 0.33 36.99 3.16
3134 3734 5.471556 TCCGGTTGATTAACTCTGTACAA 57.528 39.130 0.00 0.00 36.99 2.41
3135 3735 5.221481 TGTTCCGGTTGATTAACTCTGTACA 60.221 40.000 0.00 0.00 36.99 2.90
3136 3736 5.119743 GTGTTCCGGTTGATTAACTCTGTAC 59.880 44.000 0.00 0.00 36.99 2.90
3137 3737 5.221481 TGTGTTCCGGTTGATTAACTCTGTA 60.221 40.000 0.00 0.00 36.99 2.74
3138 3738 4.062991 GTGTTCCGGTTGATTAACTCTGT 58.937 43.478 0.00 0.00 36.99 3.41
3139 3739 4.062293 TGTGTTCCGGTTGATTAACTCTG 58.938 43.478 0.00 0.00 36.99 3.35
3140 3740 4.345859 TGTGTTCCGGTTGATTAACTCT 57.654 40.909 0.00 0.00 36.99 3.24
3141 3741 5.622770 ATTGTGTTCCGGTTGATTAACTC 57.377 39.130 0.00 0.00 36.99 3.01
3142 3742 5.998981 TGTATTGTGTTCCGGTTGATTAACT 59.001 36.000 0.00 0.00 36.99 2.24
3143 3743 6.243811 TGTATTGTGTTCCGGTTGATTAAC 57.756 37.500 0.00 0.00 36.04 2.01
3144 3744 6.879276 TTGTATTGTGTTCCGGTTGATTAA 57.121 33.333 0.00 0.00 0.00 1.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.