Multiple sequence alignment - TraesCS5B01G539700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G539700 chr5B 100.000 5363 0 0 1 5363 695421376 695426738 0.000000e+00 9904.0
1 TraesCS5B01G539700 chr5B 92.505 2188 152 9 2153 4337 695776736 695778914 0.000000e+00 3121.0
2 TraesCS5B01G539700 chr5B 92.679 1366 76 16 741 2084 695775189 695776552 0.000000e+00 1947.0
3 TraesCS5B01G539700 chr5B 80.543 2580 391 66 2176 4709 710344044 710346558 0.000000e+00 1881.0
4 TraesCS5B01G539700 chr5B 96.940 719 12 3 1 711 695774478 695775194 0.000000e+00 1197.0
5 TraesCS5B01G539700 chr5B 80.552 1486 199 58 657 2086 710342394 710343845 0.000000e+00 1061.0
6 TraesCS5B01G539700 chr5B 81.477 826 144 7 1010 1832 695967543 695968362 0.000000e+00 669.0
7 TraesCS5B01G539700 chr5B 79.357 809 157 10 1028 1831 695989846 695990649 1.300000e-155 560.0
8 TraesCS5B01G539700 chr5B 87.833 263 17 6 4789 5048 695780411 695780661 1.460000e-75 294.0
9 TraesCS5B01G539700 chr5B 76.562 320 40 16 4710 5007 654702896 654703202 5.600000e-30 143.0
10 TraesCS5B01G539700 chr5B 90.323 93 4 2 328 419 710341416 710341504 3.390000e-22 117.0
11 TraesCS5B01G539700 chr5D 93.294 2192 138 7 2153 4342 555915539 555913355 0.000000e+00 3225.0
12 TraesCS5B01G539700 chr5D 91.702 1892 102 25 240 2084 555917607 555915724 0.000000e+00 2573.0
13 TraesCS5B01G539700 chr5D 83.333 1980 285 22 2373 4337 559982706 559984655 0.000000e+00 1786.0
14 TraesCS5B01G539700 chr5D 82.055 2034 303 41 2324 4331 559917400 559919397 0.000000e+00 1677.0
15 TraesCS5B01G539700 chr5D 81.034 1160 209 10 2274 3429 556109919 556108767 0.000000e+00 913.0
16 TraesCS5B01G539700 chr5D 80.460 1218 192 29 637 1831 559915340 559916534 0.000000e+00 889.0
17 TraesCS5B01G539700 chr5D 92.791 541 35 1 859 1399 556111510 556110974 0.000000e+00 780.0
18 TraesCS5B01G539700 chr5D 81.722 941 148 18 905 1835 555456722 555455796 0.000000e+00 763.0
19 TraesCS5B01G539700 chr5D 89.836 610 15 14 287 868 556112122 556111532 0.000000e+00 739.0
20 TraesCS5B01G539700 chr5D 81.949 831 138 8 1010 1831 559981542 559982369 0.000000e+00 693.0
21 TraesCS5B01G539700 chr5D 87.276 613 67 6 1348 1951 556110968 556110358 0.000000e+00 689.0
22 TraesCS5B01G539700 chr5D 87.346 324 34 6 5042 5361 156572702 156573022 1.100000e-96 364.0
23 TraesCS5B01G539700 chr5D 86.349 315 37 5 5051 5361 566052159 566051847 6.650000e-89 339.0
24 TraesCS5B01G539700 chr5D 77.170 622 100 19 3735 4337 555041985 555041387 1.860000e-84 324.0
25 TraesCS5B01G539700 chr5D 90.179 112 4 2 150 261 556112223 556112119 7.240000e-29 139.0
26 TraesCS5B01G539700 chr5D 90.909 88 3 2 332 418 559914812 559914895 4.390000e-21 113.0
27 TraesCS5B01G539700 chr5D 91.071 56 5 0 172 227 555920011 555919956 5.760000e-10 76.8
28 TraesCS5B01G539700 chr4A 81.721 2243 347 38 2373 4581 604849257 604847044 0.000000e+00 1812.0
29 TraesCS5B01G539700 chr4A 83.005 1724 247 27 2324 4028 604774706 604776402 0.000000e+00 1519.0
30 TraesCS5B01G539700 chr4A 83.120 1173 190 7 2302 3469 604390777 604389608 0.000000e+00 1062.0
31 TraesCS5B01G539700 chr4A 79.243 1373 220 49 619 1947 604772518 604773869 0.000000e+00 896.0
32 TraesCS5B01G539700 chr4A 79.082 392 60 8 3917 4307 604383911 604383541 3.210000e-62 250.0
33 TraesCS5B01G539700 chr4A 93.846 65 3 1 336 399 604772122 604772186 4.420000e-16 97.1
34 TraesCS5B01G539700 chr4D 94.249 313 16 1 5051 5361 497314494 497314806 1.350000e-130 477.0
35 TraesCS5B01G539700 chr6B 93.610 313 17 2 5051 5361 59931839 59932150 1.050000e-126 464.0
36 TraesCS5B01G539700 chr6B 93.050 259 15 2 5048 5303 703351143 703351401 5.070000e-100 375.0
37 TraesCS5B01G539700 chr1D 76.422 844 179 19 997 1829 11778264 11777430 6.380000e-119 438.0
38 TraesCS5B01G539700 chr2D 90.994 322 25 3 5045 5363 590807791 590808111 1.070000e-116 431.0
39 TraesCS5B01G539700 chr6D 86.728 324 36 6 5042 5361 83109910 83110230 2.380000e-93 353.0
40 TraesCS5B01G539700 chr3D 86.392 316 38 5 5051 5363 121944756 121944443 1.850000e-89 340.0
41 TraesCS5B01G539700 chr7D 86.349 315 37 5 5050 5361 453186855 453186544 6.650000e-89 339.0
42 TraesCS5B01G539700 chr6A 75.410 122 26 4 3821 3940 604607988 604607869 7.500000e-04 56.5
43 TraesCS5B01G539700 chr6A 100.000 28 0 0 3821 3848 604852423 604852396 1.000000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G539700 chr5B 695421376 695426738 5362 False 9904.000000 9904 100.000000 1 5363 1 chr5B.!!$F2 5362
1 TraesCS5B01G539700 chr5B 695774478 695780661 6183 False 1639.750000 3121 92.489250 1 5048 4 chr5B.!!$F5 5047
2 TraesCS5B01G539700 chr5B 710341416 710346558 5142 False 1019.666667 1881 83.806000 328 4709 3 chr5B.!!$F6 4381
3 TraesCS5B01G539700 chr5B 695967543 695968362 819 False 669.000000 669 81.477000 1010 1832 1 chr5B.!!$F3 822
4 TraesCS5B01G539700 chr5B 695989846 695990649 803 False 560.000000 560 79.357000 1028 1831 1 chr5B.!!$F4 803
5 TraesCS5B01G539700 chr5D 555913355 555920011 6656 True 1958.266667 3225 92.022333 172 4342 3 chr5D.!!$R4 4170
6 TraesCS5B01G539700 chr5D 559981542 559984655 3113 False 1239.500000 1786 82.641000 1010 4337 2 chr5D.!!$F3 3327
7 TraesCS5B01G539700 chr5D 559914812 559919397 4585 False 893.000000 1677 84.474667 332 4331 3 chr5D.!!$F2 3999
8 TraesCS5B01G539700 chr5D 555455796 555456722 926 True 763.000000 763 81.722000 905 1835 1 chr5D.!!$R2 930
9 TraesCS5B01G539700 chr5D 556108767 556112223 3456 True 652.000000 913 88.223200 150 3429 5 chr5D.!!$R5 3279
10 TraesCS5B01G539700 chr5D 555041387 555041985 598 True 324.000000 324 77.170000 3735 4337 1 chr5D.!!$R1 602
11 TraesCS5B01G539700 chr4A 604847044 604849257 2213 True 1812.000000 1812 81.721000 2373 4581 1 chr4A.!!$R3 2208
12 TraesCS5B01G539700 chr4A 604389608 604390777 1169 True 1062.000000 1062 83.120000 2302 3469 1 chr4A.!!$R2 1167
13 TraesCS5B01G539700 chr4A 604772122 604776402 4280 False 837.366667 1519 85.364667 336 4028 3 chr4A.!!$F1 3692
14 TraesCS5B01G539700 chr1D 11777430 11778264 834 True 438.000000 438 76.422000 997 1829 1 chr1D.!!$R1 832

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
543 3358 0.525668 CAACTAGCTACGAGCACCCG 60.526 60.000 9.09 0.00 45.56 5.28 F
795 3867 0.670546 GCACCAAGAACTAGCTCGCA 60.671 55.000 0.00 0.00 0.00 5.10 F
1530 4726 0.760567 TGGATGGTCCGAGGGATGAG 60.761 60.000 0.00 0.00 40.17 2.90 F
2192 6037 0.035458 ACGAAGCTAGCTTGCAACCT 59.965 50.000 33.91 8.82 36.26 3.50 F
2984 6864 0.248843 AAGAAAGAGGCTGCCGAGAG 59.751 55.000 13.96 0.00 0.00 3.20 F
3605 7488 1.421268 ACAGTTGATGTCAGGCTTGGA 59.579 47.619 0.00 0.00 37.75 3.53 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1521 4717 0.034670 ACTTGGCAAGCTCATCCCTC 60.035 55.0 26.45 0.00 0.00 4.30 R
2174 6005 1.160137 AAGGTTGCAAGCTAGCTTCG 58.840 50.0 29.86 21.34 35.36 3.79 R
3161 7041 0.464193 TAGCCGCCGAATAAAACCCC 60.464 55.0 0.00 0.00 0.00 4.95 R
3722 7605 1.005340 CGCCTCTTCACATCTCTTGC 58.995 55.0 0.00 0.00 0.00 4.01 R
4276 8183 0.392729 ATCTCAGCAGTTGCAGCCTC 60.393 55.0 6.90 0.00 45.16 4.70 R
5184 10200 0.035152 TCTGTAGCTTGCCCATGGTG 60.035 55.0 11.73 3.26 0.00 4.17 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
486 3281 4.121317 TGCTCCCCGTACATAAAATAACG 58.879 43.478 0.00 0.00 35.20 3.18
543 3358 0.525668 CAACTAGCTACGAGCACCCG 60.526 60.000 9.09 0.00 45.56 5.28
755 3827 6.058553 TCTCTCCATGTTTTCATCTGACAT 57.941 37.500 0.00 0.00 38.64 3.06
795 3867 0.670546 GCACCAAGAACTAGCTCGCA 60.671 55.000 0.00 0.00 0.00 5.10
835 3907 3.630148 CTAGCGCGTGGCCATTCG 61.630 66.667 20.84 20.84 45.17 3.34
935 4061 2.558795 TCTGAGTTCTTCCCTTCACTCG 59.441 50.000 0.00 0.00 38.85 4.18
1367 4557 1.737236 TGAAATCGCTGACCAAATCGG 59.263 47.619 0.00 0.00 42.50 4.18
1530 4726 0.760567 TGGATGGTCCGAGGGATGAG 60.761 60.000 0.00 0.00 40.17 2.90
1605 4807 4.506288 GTGTTGTCTATTGTTGGTTTTGGC 59.494 41.667 0.00 0.00 0.00 4.52
1794 4999 3.652057 TGGGATGAAAGGAAGTCCATC 57.348 47.619 0.00 0.00 38.89 3.51
1860 5074 9.288576 TGAATTCTCTTAACAGATGTTTCATGT 57.711 29.630 7.05 0.00 39.31 3.21
1935 5156 7.627340 TCTACACAAAGAAAACAACTCGATTC 58.373 34.615 0.00 0.00 0.00 2.52
1938 5159 6.093495 ACACAAAGAAAACAACTCGATTCAGA 59.907 34.615 0.00 0.00 0.00 3.27
1957 5178 7.776933 TTCAGATCGGATTGAACAATTCTAG 57.223 36.000 0.00 0.00 0.00 2.43
1967 5188 7.285401 GGATTGAACAATTCTAGGCATCCTTAA 59.715 37.037 1.56 0.00 34.61 1.85
1984 5208 7.453838 CATCCTTAACACTAACGCTAGAAAAC 58.546 38.462 0.00 0.00 0.00 2.43
1988 5232 9.793252 CCTTAACACTAACGCTAGAAAACTATA 57.207 33.333 0.00 0.00 0.00 1.31
2049 5328 6.303054 TGTGTCCAAATCCTTCATTAACTCA 58.697 36.000 0.00 0.00 0.00 3.41
2050 5329 6.947733 TGTGTCCAAATCCTTCATTAACTCAT 59.052 34.615 0.00 0.00 0.00 2.90
2053 5332 9.699410 TGTCCAAATCCTTCATTAACTCATATT 57.301 29.630 0.00 0.00 0.00 1.28
2099 5378 9.950496 ATCAAAATTCTGATAAGTACACAGACT 57.050 29.630 0.00 4.80 39.80 3.24
2105 5384 7.761038 TCTGATAAGTACACAGACTTCTGAA 57.239 36.000 13.27 0.00 46.59 3.02
2107 5386 8.638873 TCTGATAAGTACACAGACTTCTGAAAA 58.361 33.333 13.27 0.00 46.59 2.29
2108 5387 8.818141 TGATAAGTACACAGACTTCTGAAAAG 57.182 34.615 13.27 2.93 46.59 2.27
2131 5410 9.574516 AAAGTAATATATGTGTCCAAATCCTCC 57.425 33.333 0.00 0.00 0.00 4.30
2132 5411 8.275187 AGTAATATATGTGTCCAAATCCTCCA 57.725 34.615 0.00 0.00 0.00 3.86
2138 5417 5.255397 TGTGTCCAAATCCTCCATTAACT 57.745 39.130 0.00 0.00 0.00 2.24
2146 5943 7.895429 TCCAAATCCTCCATTAACTCAGAATTT 59.105 33.333 0.00 0.00 0.00 1.82
2148 5945 9.933723 CAAATCCTCCATTAACTCAGAATTTTT 57.066 29.630 0.00 0.00 0.00 1.94
2191 6036 0.875059 AACGAAGCTAGCTTGCAACC 59.125 50.000 33.91 17.70 36.26 3.77
2192 6037 0.035458 ACGAAGCTAGCTTGCAACCT 59.965 50.000 33.91 8.82 36.26 3.50
2211 6056 6.238759 GCAACCTTATAGGGAAACATAAGCAG 60.239 42.308 8.09 0.00 40.58 4.24
2264 6133 7.201758 CCAGTTAAGTACTATGTGTCGGTGATA 60.202 40.741 0.00 0.00 34.56 2.15
2727 6605 1.728425 GGTTTACTAGCAAACCGACCG 59.272 52.381 19.52 0.00 45.84 4.79
2984 6864 0.248843 AAGAAAGAGGCTGCCGAGAG 59.751 55.000 13.96 0.00 0.00 3.20
3021 6901 6.375455 AGCTTATCAACAAAAGTATGGTCCAG 59.625 38.462 0.00 0.00 0.00 3.86
3069 6949 1.461127 GTTCAAGCATGTCGAGTCCAC 59.539 52.381 0.00 0.00 0.00 4.02
3125 7005 4.571984 AGTTGAAGAAAATTTTGCCACTGC 59.428 37.500 8.47 0.00 38.26 4.40
3129 7009 1.792367 GAAAATTTTGCCACTGCGGTC 59.208 47.619 8.47 0.00 41.78 4.79
3146 7026 2.203422 CGGTGGAGGCCAAACCAA 60.203 61.111 18.41 3.08 43.14 3.67
3159 7039 4.289342 GCCAAACCAATTTGCAAAATCAC 58.711 39.130 17.19 0.00 43.38 3.06
3161 7041 4.525686 CAAACCAATTTGCAAAATCACCG 58.474 39.130 17.19 3.50 38.92 4.94
3280 7160 3.897141 TGCCATCATGTTGCATCAAAT 57.103 38.095 0.75 0.00 0.00 2.32
3328 7208 5.358298 AGCTTTACGTGTTCTGGATTTTC 57.642 39.130 0.00 0.00 0.00 2.29
3331 7211 5.398416 GCTTTACGTGTTCTGGATTTTCAAC 59.602 40.000 0.00 0.00 0.00 3.18
3336 7216 3.485743 GTGTTCTGGATTTTCAACGTTGC 59.514 43.478 23.47 8.79 0.00 4.17
3351 7231 2.009774 CGTTGCGAGGATTTGAAGGAT 58.990 47.619 0.00 0.00 0.00 3.24
3429 7309 5.523916 GGGCACATATATATCAAAGCTACCG 59.476 44.000 0.00 0.00 0.00 4.02
3487 7367 6.984474 CCTAGATATTTGGAATACACGTGTGT 59.016 38.462 30.83 22.24 46.87 3.72
3532 7412 4.062991 CCGGCTAACTAAACTTGAACACT 58.937 43.478 0.00 0.00 0.00 3.55
3534 7414 5.440685 CGGCTAACTAAACTTGAACACTTG 58.559 41.667 0.00 0.00 0.00 3.16
3541 7421 5.823045 ACTAAACTTGAACACTTGGAAGGAG 59.177 40.000 0.00 0.00 0.00 3.69
3605 7488 1.421268 ACAGTTGATGTCAGGCTTGGA 59.579 47.619 0.00 0.00 37.75 3.53
3643 7526 1.482182 CGGATGTGTTGGAGGATCTCA 59.518 52.381 0.00 0.00 33.73 3.27
3679 7562 6.071320 AGTTTGAAGGAGCTCAAGGTTTATT 58.929 36.000 17.19 0.00 36.69 1.40
3685 7568 3.010420 GAGCTCAAGGTTTATTTCCGCT 58.990 45.455 9.40 0.00 0.00 5.52
3722 7605 3.068732 TCTGATCAAGTATCTTGCGAGGG 59.931 47.826 0.00 0.00 35.45 4.30
3800 7686 8.673711 CAAACTCCGATCTTTGGATATAAAACA 58.326 33.333 0.00 0.00 34.32 2.83
3802 7691 6.992715 ACTCCGATCTTTGGATATAAAACAGG 59.007 38.462 0.00 0.00 34.32 4.00
3860 7753 4.330250 CCTCTGCCATCTTCTCTTCAAAA 58.670 43.478 0.00 0.00 0.00 2.44
4061 7965 2.225491 GCACAGTCCAACGCAATTCTTA 59.775 45.455 0.00 0.00 0.00 2.10
4132 8036 3.375922 TGTTTCGTTTGTGAAAGGGTCTC 59.624 43.478 0.00 0.00 38.45 3.36
4235 8142 5.960113 TCTCTCATCTCTCAAACAAGCTAC 58.040 41.667 0.00 0.00 0.00 3.58
4276 8183 1.291184 TGCGACACCTTCAGAATGCG 61.291 55.000 0.00 0.00 34.76 4.73
4301 8208 1.338484 TGCAACTGCTGAGATCAGGAC 60.338 52.381 11.63 0.00 43.94 3.85
4342 8249 6.068010 CCCAACCATCCTGCACTTATTATTA 58.932 40.000 0.00 0.00 0.00 0.98
4347 8364 8.451908 ACCATCCTGCACTTATTATTAAAGAC 57.548 34.615 0.00 0.00 0.00 3.01
4388 8416 6.322969 TGATGCTGATGAGGATTAAAATGCTT 59.677 34.615 0.00 0.00 37.20 3.91
4398 8426 7.039784 TGAGGATTAAAATGCTTACAAACTGCT 60.040 33.333 0.00 0.00 37.20 4.24
4405 8433 3.664107 TGCTTACAAACTGCTAGAGGTG 58.336 45.455 0.00 0.00 0.00 4.00
4407 8435 3.866449 GCTTACAAACTGCTAGAGGTGCT 60.866 47.826 0.00 0.00 0.00 4.40
4410 8438 4.351874 ACAAACTGCTAGAGGTGCTAAA 57.648 40.909 0.00 0.00 0.00 1.85
4412 8440 5.130350 ACAAACTGCTAGAGGTGCTAAAAA 58.870 37.500 0.00 0.00 0.00 1.94
4436 8464 9.753674 AAAATATTCTAGTCATTCACCCTTTCA 57.246 29.630 0.00 0.00 0.00 2.69
4439 8467 7.636150 ATTCTAGTCATTCACCCTTTCATTG 57.364 36.000 0.00 0.00 0.00 2.82
4441 8469 6.173339 TCTAGTCATTCACCCTTTCATTGTC 58.827 40.000 0.00 0.00 0.00 3.18
4442 8470 4.728772 AGTCATTCACCCTTTCATTGTCA 58.271 39.130 0.00 0.00 0.00 3.58
4443 8471 5.139727 AGTCATTCACCCTTTCATTGTCAA 58.860 37.500 0.00 0.00 0.00 3.18
4454 8483 3.454042 TCATTGTCAAAAGCATCGTCG 57.546 42.857 0.00 0.00 0.00 5.12
4470 8499 5.739161 GCATCGTCGCATTTTAATTTTCTCT 59.261 36.000 0.00 0.00 0.00 3.10
4490 8519 7.893124 TCTCTACCAAAATACGTCTATTCCT 57.107 36.000 0.00 0.00 0.00 3.36
4491 8520 7.713750 TCTCTACCAAAATACGTCTATTCCTG 58.286 38.462 0.00 0.00 0.00 3.86
4492 8521 6.812998 TCTACCAAAATACGTCTATTCCTGG 58.187 40.000 0.00 1.01 34.33 4.45
4493 8522 5.687166 ACCAAAATACGTCTATTCCTGGA 57.313 39.130 14.56 0.00 33.34 3.86
4499 8528 3.033659 ACGTCTATTCCTGGACCTGAT 57.966 47.619 0.00 0.00 29.47 2.90
4501 8530 3.226777 CGTCTATTCCTGGACCTGATCT 58.773 50.000 0.00 0.00 29.47 2.75
4502 8531 3.639094 CGTCTATTCCTGGACCTGATCTT 59.361 47.826 0.00 0.00 29.47 2.40
4503 8532 4.827835 CGTCTATTCCTGGACCTGATCTTA 59.172 45.833 0.00 0.00 29.47 2.10
4505 8534 6.015010 CGTCTATTCCTGGACCTGATCTTATT 60.015 42.308 0.00 0.00 29.47 1.40
4537 8583 8.675705 TCAAATTCACATGTTCTACTCTTTCA 57.324 30.769 0.00 0.00 0.00 2.69
4568 8614 0.960364 CAGGGTATGTTGTGCGGCTT 60.960 55.000 0.00 0.00 0.00 4.35
4570 8616 1.241315 GGGTATGTTGTGCGGCTTGT 61.241 55.000 0.00 0.00 0.00 3.16
4577 8623 2.164624 TGTTGTGCGGCTTGTTTACTTT 59.835 40.909 0.00 0.00 0.00 2.66
4581 8627 3.183754 GTGCGGCTTGTTTACTTTGTTT 58.816 40.909 0.00 0.00 0.00 2.83
4585 8631 4.425520 CGGCTTGTTTACTTTGTTTGGAA 58.574 39.130 0.00 0.00 0.00 3.53
4587 8633 5.051106 CGGCTTGTTTACTTTGTTTGGAATG 60.051 40.000 0.00 0.00 0.00 2.67
4589 8635 5.277297 GCTTGTTTACTTTGTTTGGAATGCC 60.277 40.000 0.00 0.00 0.00 4.40
4590 8636 5.344743 TGTTTACTTTGTTTGGAATGCCA 57.655 34.783 0.00 0.00 44.17 4.92
4591 8637 5.923204 TGTTTACTTTGTTTGGAATGCCAT 58.077 33.333 0.00 0.00 45.46 4.40
4592 8638 5.757320 TGTTTACTTTGTTTGGAATGCCATG 59.243 36.000 0.00 0.00 45.46 3.66
4593 8639 2.769893 ACTTTGTTTGGAATGCCATGC 58.230 42.857 0.00 0.00 45.46 4.06
4595 8641 0.037512 TTGTTTGGAATGCCATGCCG 60.038 50.000 0.00 0.00 45.46 5.69
4627 8681 0.613260 AAGCCAGTATTCCTCGCACA 59.387 50.000 0.00 0.00 0.00 4.57
4632 8686 2.009051 CAGTATTCCTCGCACATGCAA 58.991 47.619 4.49 0.00 42.21 4.08
4633 8687 2.031314 CAGTATTCCTCGCACATGCAAG 59.969 50.000 4.49 0.00 42.21 4.01
4640 8694 3.832981 GCACATGCAAGCGACAAC 58.167 55.556 0.00 0.00 41.59 3.32
4657 8714 4.272504 CGACAACCTGAAAAACTGAAGCTA 59.727 41.667 0.00 0.00 0.00 3.32
4660 8717 7.112452 ACAACCTGAAAAACTGAAGCTAAAT 57.888 32.000 0.00 0.00 0.00 1.40
4663 8720 7.346751 ACCTGAAAAACTGAAGCTAAATCAA 57.653 32.000 0.00 0.00 0.00 2.57
4672 8729 6.769512 ACTGAAGCTAAATCAAAGACACCTA 58.230 36.000 0.00 0.00 0.00 3.08
4673 8730 6.651225 ACTGAAGCTAAATCAAAGACACCTAC 59.349 38.462 0.00 0.00 0.00 3.18
4674 8731 6.769512 TGAAGCTAAATCAAAGACACCTACT 58.230 36.000 0.00 0.00 0.00 2.57
4675 8732 7.903145 TGAAGCTAAATCAAAGACACCTACTA 58.097 34.615 0.00 0.00 0.00 1.82
4676 8733 8.372459 TGAAGCTAAATCAAAGACACCTACTAA 58.628 33.333 0.00 0.00 0.00 2.24
4677 8734 8.779354 AAGCTAAATCAAAGACACCTACTAAG 57.221 34.615 0.00 0.00 0.00 2.18
4678 8735 7.908453 AGCTAAATCAAAGACACCTACTAAGT 58.092 34.615 0.00 0.00 0.00 2.24
4681 8738 5.979288 ATCAAAGACACCTACTAAGTCGT 57.021 39.130 0.00 0.00 37.36 4.34
4696 8753 4.411256 AAGTCGTAAAAAGGTGGTCTCA 57.589 40.909 0.00 0.00 0.00 3.27
4709 8766 2.491693 GTGGTCTCAGGTCTCTCTCAAG 59.508 54.545 0.00 0.00 0.00 3.02
4711 8768 2.752903 GGTCTCAGGTCTCTCTCAAGTC 59.247 54.545 0.00 0.00 0.00 3.01
4712 8769 3.561313 GGTCTCAGGTCTCTCTCAAGTCT 60.561 52.174 0.00 0.00 0.00 3.24
4713 8770 3.689649 GTCTCAGGTCTCTCTCAAGTCTC 59.310 52.174 0.00 0.00 0.00 3.36
4714 8771 3.329225 TCTCAGGTCTCTCTCAAGTCTCA 59.671 47.826 0.00 0.00 0.00 3.27
4715 8772 4.078537 CTCAGGTCTCTCTCAAGTCTCAA 58.921 47.826 0.00 0.00 0.00 3.02
4716 8773 3.823873 TCAGGTCTCTCTCAAGTCTCAAC 59.176 47.826 0.00 0.00 0.00 3.18
4717 8774 3.826157 CAGGTCTCTCTCAAGTCTCAACT 59.174 47.826 0.00 0.00 37.32 3.16
4718 8775 3.826157 AGGTCTCTCTCAAGTCTCAACTG 59.174 47.826 0.00 0.00 35.36 3.16
4719 8776 3.823873 GGTCTCTCTCAAGTCTCAACTGA 59.176 47.826 0.00 0.00 35.36 3.41
4746 8803 9.643735 AAGTTGCTACTACTTCCTATATACACT 57.356 33.333 0.00 0.00 33.17 3.55
4760 8817 6.767902 CCTATATACACTGTGTTTGATTGCCT 59.232 38.462 19.73 0.00 0.00 4.75
4763 8820 2.880890 ACACTGTGTTTGATTGCCTCTC 59.119 45.455 7.80 0.00 0.00 3.20
4765 8822 3.567164 CACTGTGTTTGATTGCCTCTCTT 59.433 43.478 0.00 0.00 0.00 2.85
4787 8844 8.954950 TCTTCCTTACTTTGATGATTCAGATC 57.045 34.615 0.00 0.00 32.27 2.75
4816 9830 9.668497 AACTCTTATCACTGTTAATAAGGTTCC 57.332 33.333 14.84 0.00 36.53 3.62
4844 9858 4.030913 TCGGAATTGGAGTCTGAATACCT 58.969 43.478 0.00 0.00 0.00 3.08
4846 9860 5.068723 TCGGAATTGGAGTCTGAATACCTAC 59.931 44.000 0.00 0.00 0.00 3.18
4890 9904 5.897050 ACTCTGTCTGTAGTAGCTTTATGC 58.103 41.667 0.00 0.00 43.29 3.14
4894 9908 7.331026 TCTGTCTGTAGTAGCTTTATGCATTT 58.669 34.615 3.54 0.00 45.94 2.32
4900 9914 3.701040 AGTAGCTTTATGCATTTGGTGGG 59.299 43.478 3.54 0.00 45.94 4.61
4909 9923 2.025037 TGCATTTGGTGGGATCTAAGCT 60.025 45.455 0.00 0.00 0.00 3.74
4921 9935 4.022503 GGGATCTAAGCTCCATTTGCATTC 60.023 45.833 0.00 0.00 34.24 2.67
4973 9987 6.719365 ACTTGATTTCTGTTTCTCTTGTTCG 58.281 36.000 0.00 0.00 0.00 3.95
4977 9991 5.499139 TTTCTGTTTCTCTTGTTCGCAAT 57.501 34.783 0.00 0.00 36.39 3.56
5027 10043 5.692204 GTGATACCTACCATGAAAGTCGATG 59.308 44.000 0.00 0.00 0.00 3.84
5038 10054 8.189709 CCATGAAAGTCGATGGTATATATGTG 57.810 38.462 0.00 0.00 35.33 3.21
5048 10064 7.812669 TCGATGGTATATATGTGATGTGTGTTC 59.187 37.037 0.00 0.00 0.00 3.18
5049 10065 7.814587 CGATGGTATATATGTGATGTGTGTTCT 59.185 37.037 0.00 0.00 0.00 3.01
5050 10066 9.494271 GATGGTATATATGTGATGTGTGTTCTT 57.506 33.333 0.00 0.00 0.00 2.52
5051 10067 8.887036 TGGTATATATGTGATGTGTGTTCTTC 57.113 34.615 0.00 0.00 0.00 2.87
5052 10068 7.651704 TGGTATATATGTGATGTGTGTTCTTCG 59.348 37.037 0.00 0.00 0.00 3.79
5053 10069 7.865889 GGTATATATGTGATGTGTGTTCTTCGA 59.134 37.037 0.00 0.00 0.00 3.71
5054 10070 9.244799 GTATATATGTGATGTGTGTTCTTCGAA 57.755 33.333 0.00 0.00 0.00 3.71
5055 10071 8.716646 ATATATGTGATGTGTGTTCTTCGAAA 57.283 30.769 0.00 0.00 0.00 3.46
5056 10072 5.947228 ATGTGATGTGTGTTCTTCGAAAT 57.053 34.783 0.00 0.00 0.00 2.17
5057 10073 8.716646 ATATGTGATGTGTGTTCTTCGAAATA 57.283 30.769 0.00 0.00 0.00 1.40
5058 10074 6.466308 TGTGATGTGTGTTCTTCGAAATAG 57.534 37.500 0.00 0.00 0.00 1.73
5059 10075 5.408299 TGTGATGTGTGTTCTTCGAAATAGG 59.592 40.000 0.00 0.00 0.00 2.57
5060 10076 4.391830 TGATGTGTGTTCTTCGAAATAGGC 59.608 41.667 0.00 0.00 0.00 3.93
5061 10077 4.002906 TGTGTGTTCTTCGAAATAGGCT 57.997 40.909 0.00 0.00 0.00 4.58
5062 10078 4.385825 TGTGTGTTCTTCGAAATAGGCTT 58.614 39.130 0.00 0.00 0.00 4.35
5063 10079 4.819630 TGTGTGTTCTTCGAAATAGGCTTT 59.180 37.500 0.00 0.00 0.00 3.51
5064 10080 5.049680 TGTGTGTTCTTCGAAATAGGCTTTC 60.050 40.000 0.00 0.00 0.00 2.62
5076 10092 3.509659 GCTTTCGCCCCGCTTTAT 58.490 55.556 0.00 0.00 0.00 1.40
5077 10093 2.697819 GCTTTCGCCCCGCTTTATA 58.302 52.632 0.00 0.00 0.00 0.98
5078 10094 0.586802 GCTTTCGCCCCGCTTTATAG 59.413 55.000 0.00 0.00 0.00 1.31
5079 10095 1.808891 GCTTTCGCCCCGCTTTATAGA 60.809 52.381 0.00 0.00 0.00 1.98
5080 10096 2.767505 CTTTCGCCCCGCTTTATAGAT 58.232 47.619 0.00 0.00 0.00 1.98
5081 10097 3.863400 GCTTTCGCCCCGCTTTATAGATA 60.863 47.826 0.00 0.00 0.00 1.98
5082 10098 4.312443 CTTTCGCCCCGCTTTATAGATAA 58.688 43.478 0.00 0.00 0.00 1.75
5083 10099 4.339872 TTCGCCCCGCTTTATAGATAAA 57.660 40.909 0.00 0.00 0.00 1.40
5100 10116 8.954950 ATAGATAAAGCATATGTCCATACAGC 57.045 34.615 4.29 5.77 39.49 4.40
5101 10117 6.176183 AGATAAAGCATATGTCCATACAGCC 58.824 40.000 4.29 0.00 39.49 4.85
5102 10118 3.862877 AAGCATATGTCCATACAGCCA 57.137 42.857 4.29 0.00 39.49 4.75
5103 10119 3.862877 AGCATATGTCCATACAGCCAA 57.137 42.857 4.29 0.00 39.49 4.52
5104 10120 3.748083 AGCATATGTCCATACAGCCAAG 58.252 45.455 4.29 0.00 39.49 3.61
5105 10121 3.137176 AGCATATGTCCATACAGCCAAGT 59.863 43.478 4.29 0.00 39.49 3.16
5106 10122 3.499918 GCATATGTCCATACAGCCAAGTC 59.500 47.826 4.29 0.00 39.49 3.01
5107 10123 4.707105 CATATGTCCATACAGCCAAGTCA 58.293 43.478 0.00 0.00 39.49 3.41
5108 10124 2.472695 TGTCCATACAGCCAAGTCAC 57.527 50.000 0.00 0.00 0.00 3.67
5109 10125 1.696884 TGTCCATACAGCCAAGTCACA 59.303 47.619 0.00 0.00 0.00 3.58
5110 10126 2.105649 TGTCCATACAGCCAAGTCACAA 59.894 45.455 0.00 0.00 0.00 3.33
5111 10127 2.484264 GTCCATACAGCCAAGTCACAAC 59.516 50.000 0.00 0.00 0.00 3.32
5112 10128 1.812571 CCATACAGCCAAGTCACAACC 59.187 52.381 0.00 0.00 0.00 3.77
5113 10129 2.503331 CATACAGCCAAGTCACAACCA 58.497 47.619 0.00 0.00 0.00 3.67
5114 10130 2.254546 TACAGCCAAGTCACAACCAG 57.745 50.000 0.00 0.00 0.00 4.00
5115 10131 0.255890 ACAGCCAAGTCACAACCAGT 59.744 50.000 0.00 0.00 0.00 4.00
5116 10132 0.947244 CAGCCAAGTCACAACCAGTC 59.053 55.000 0.00 0.00 0.00 3.51
5117 10133 0.546122 AGCCAAGTCACAACCAGTCA 59.454 50.000 0.00 0.00 0.00 3.41
5118 10134 0.663153 GCCAAGTCACAACCAGTCAC 59.337 55.000 0.00 0.00 0.00 3.67
5119 10135 2.016604 GCCAAGTCACAACCAGTCACA 61.017 52.381 0.00 0.00 0.00 3.58
5120 10136 2.364632 CCAAGTCACAACCAGTCACAA 58.635 47.619 0.00 0.00 0.00 3.33
5121 10137 2.752354 CCAAGTCACAACCAGTCACAAA 59.248 45.455 0.00 0.00 0.00 2.83
5122 10138 3.192422 CCAAGTCACAACCAGTCACAAAA 59.808 43.478 0.00 0.00 0.00 2.44
5123 10139 4.321601 CCAAGTCACAACCAGTCACAAAAA 60.322 41.667 0.00 0.00 0.00 1.94
5124 10140 4.701956 AGTCACAACCAGTCACAAAAAG 57.298 40.909 0.00 0.00 0.00 2.27
5125 10141 4.331968 AGTCACAACCAGTCACAAAAAGA 58.668 39.130 0.00 0.00 0.00 2.52
5126 10142 4.764823 AGTCACAACCAGTCACAAAAAGAA 59.235 37.500 0.00 0.00 0.00 2.52
5127 10143 5.242838 AGTCACAACCAGTCACAAAAAGAAA 59.757 36.000 0.00 0.00 0.00 2.52
5128 10144 5.923684 GTCACAACCAGTCACAAAAAGAAAA 59.076 36.000 0.00 0.00 0.00 2.29
5129 10145 6.589907 GTCACAACCAGTCACAAAAAGAAAAT 59.410 34.615 0.00 0.00 0.00 1.82
5130 10146 6.589523 TCACAACCAGTCACAAAAAGAAAATG 59.410 34.615 0.00 0.00 0.00 2.32
5131 10147 5.351189 ACAACCAGTCACAAAAAGAAAATGC 59.649 36.000 0.00 0.00 0.00 3.56
5132 10148 5.343307 ACCAGTCACAAAAAGAAAATGCT 57.657 34.783 0.00 0.00 0.00 3.79
5133 10149 5.111293 ACCAGTCACAAAAAGAAAATGCTG 58.889 37.500 0.00 0.00 0.00 4.41
5134 10150 4.508861 CCAGTCACAAAAAGAAAATGCTGG 59.491 41.667 0.00 0.00 34.66 4.85
5135 10151 4.508861 CAGTCACAAAAAGAAAATGCTGGG 59.491 41.667 0.00 0.00 0.00 4.45
5136 10152 3.809279 GTCACAAAAAGAAAATGCTGGGG 59.191 43.478 0.00 0.00 0.00 4.96
5137 10153 2.549329 CACAAAAAGAAAATGCTGGGGC 59.451 45.455 0.00 0.00 39.26 5.80
5138 10154 2.153645 CAAAAAGAAAATGCTGGGGCC 58.846 47.619 0.00 0.00 37.74 5.80
5139 10155 1.433121 AAAAGAAAATGCTGGGGCCA 58.567 45.000 4.39 0.00 37.74 5.36
5140 10156 0.686789 AAAGAAAATGCTGGGGCCAC 59.313 50.000 4.39 0.00 37.74 5.01
5141 10157 0.471591 AAGAAAATGCTGGGGCCACA 60.472 50.000 7.89 7.89 37.74 4.17
5142 10158 0.901580 AGAAAATGCTGGGGCCACAG 60.902 55.000 31.74 31.74 41.41 3.66
5159 10175 4.282399 GCACAAATGCGCCCAAAT 57.718 50.000 4.18 0.00 43.33 2.32
5160 10176 1.789116 GCACAAATGCGCCCAAATG 59.211 52.632 4.18 0.00 43.33 2.32
5161 10177 0.669932 GCACAAATGCGCCCAAATGA 60.670 50.000 4.18 0.00 43.33 2.57
5162 10178 1.793258 CACAAATGCGCCCAAATGAA 58.207 45.000 4.18 0.00 0.00 2.57
5163 10179 1.727880 CACAAATGCGCCCAAATGAAG 59.272 47.619 4.18 0.00 0.00 3.02
5164 10180 1.338011 ACAAATGCGCCCAAATGAAGG 60.338 47.619 4.18 0.00 0.00 3.46
5165 10181 1.067000 CAAATGCGCCCAAATGAAGGA 60.067 47.619 4.18 0.00 0.00 3.36
5166 10182 1.265236 AATGCGCCCAAATGAAGGAA 58.735 45.000 4.18 0.00 0.00 3.36
5167 10183 1.265236 ATGCGCCCAAATGAAGGAAA 58.735 45.000 4.18 0.00 0.00 3.13
5168 10184 0.602562 TGCGCCCAAATGAAGGAAAG 59.397 50.000 4.18 0.00 0.00 2.62
5169 10185 0.887933 GCGCCCAAATGAAGGAAAGA 59.112 50.000 0.00 0.00 0.00 2.52
5170 10186 1.135286 GCGCCCAAATGAAGGAAAGAG 60.135 52.381 0.00 0.00 0.00 2.85
5171 10187 2.436417 CGCCCAAATGAAGGAAAGAGA 58.564 47.619 0.00 0.00 0.00 3.10
5172 10188 2.819608 CGCCCAAATGAAGGAAAGAGAA 59.180 45.455 0.00 0.00 0.00 2.87
5173 10189 3.255642 CGCCCAAATGAAGGAAAGAGAAA 59.744 43.478 0.00 0.00 0.00 2.52
5174 10190 4.560128 GCCCAAATGAAGGAAAGAGAAAC 58.440 43.478 0.00 0.00 0.00 2.78
5175 10191 4.039124 GCCCAAATGAAGGAAAGAGAAACA 59.961 41.667 0.00 0.00 0.00 2.83
5176 10192 5.279657 GCCCAAATGAAGGAAAGAGAAACAT 60.280 40.000 0.00 0.00 0.00 2.71
5177 10193 6.071391 GCCCAAATGAAGGAAAGAGAAACATA 60.071 38.462 0.00 0.00 0.00 2.29
5178 10194 7.525360 GCCCAAATGAAGGAAAGAGAAACATAA 60.525 37.037 0.00 0.00 0.00 1.90
5179 10195 8.367156 CCCAAATGAAGGAAAGAGAAACATAAA 58.633 33.333 0.00 0.00 0.00 1.40
5180 10196 9.762933 CCAAATGAAGGAAAGAGAAACATAAAA 57.237 29.630 0.00 0.00 0.00 1.52
5182 10198 9.987272 AAATGAAGGAAAGAGAAACATAAAAGG 57.013 29.630 0.00 0.00 0.00 3.11
5183 10199 6.981722 TGAAGGAAAGAGAAACATAAAAGGC 58.018 36.000 0.00 0.00 0.00 4.35
5184 10200 5.984695 AGGAAAGAGAAACATAAAAGGCC 57.015 39.130 0.00 0.00 0.00 5.19
5185 10201 5.393866 AGGAAAGAGAAACATAAAAGGCCA 58.606 37.500 5.01 0.00 0.00 5.36
5186 10202 5.243954 AGGAAAGAGAAACATAAAAGGCCAC 59.756 40.000 5.01 0.00 0.00 5.01
5187 10203 5.468540 AAAGAGAAACATAAAAGGCCACC 57.531 39.130 5.01 0.00 0.00 4.61
5188 10204 4.112634 AGAGAAACATAAAAGGCCACCA 57.887 40.909 5.01 0.00 0.00 4.17
5189 10205 4.677182 AGAGAAACATAAAAGGCCACCAT 58.323 39.130 5.01 0.00 0.00 3.55
5190 10206 4.463891 AGAGAAACATAAAAGGCCACCATG 59.536 41.667 5.01 5.27 0.00 3.66
5191 10207 3.515104 AGAAACATAAAAGGCCACCATGG 59.485 43.478 11.19 11.19 41.55 3.66
5192 10208 1.864669 ACATAAAAGGCCACCATGGG 58.135 50.000 18.09 4.89 38.19 4.00
5200 10216 3.924507 CCACCATGGGCAAGCTAC 58.075 61.111 18.09 0.00 32.67 3.58
5201 10217 1.001020 CCACCATGGGCAAGCTACA 60.001 57.895 18.09 0.00 32.67 2.74
5202 10218 1.033746 CCACCATGGGCAAGCTACAG 61.034 60.000 18.09 0.00 32.67 2.74
5203 10219 0.035152 CACCATGGGCAAGCTACAGA 60.035 55.000 18.09 0.00 0.00 3.41
5204 10220 0.698238 ACCATGGGCAAGCTACAGAA 59.302 50.000 18.09 0.00 0.00 3.02
5205 10221 1.285962 ACCATGGGCAAGCTACAGAAT 59.714 47.619 18.09 0.00 0.00 2.40
5206 10222 2.509548 ACCATGGGCAAGCTACAGAATA 59.490 45.455 18.09 0.00 0.00 1.75
5207 10223 3.144506 CCATGGGCAAGCTACAGAATAG 58.855 50.000 2.85 0.00 0.00 1.73
5208 10224 3.144506 CATGGGCAAGCTACAGAATAGG 58.855 50.000 0.00 0.00 0.00 2.57
5209 10225 1.134098 TGGGCAAGCTACAGAATAGGC 60.134 52.381 0.00 0.00 0.00 3.93
5210 10226 1.221414 GGCAAGCTACAGAATAGGCG 58.779 55.000 0.00 0.00 0.00 5.52
5211 10227 1.202533 GGCAAGCTACAGAATAGGCGA 60.203 52.381 0.00 0.00 0.00 5.54
5212 10228 2.131183 GCAAGCTACAGAATAGGCGAG 58.869 52.381 0.00 0.00 0.00 5.03
5213 10229 2.131183 CAAGCTACAGAATAGGCGAGC 58.869 52.381 0.00 0.00 0.00 5.03
5214 10230 0.312416 AGCTACAGAATAGGCGAGCG 59.688 55.000 0.00 0.00 35.09 5.03
5215 10231 0.311165 GCTACAGAATAGGCGAGCGA 59.689 55.000 0.00 0.00 0.00 4.93
5216 10232 1.926827 GCTACAGAATAGGCGAGCGAC 60.927 57.143 0.00 0.00 0.00 5.19
5217 10233 0.666913 TACAGAATAGGCGAGCGACC 59.333 55.000 0.00 0.00 0.00 4.79
5218 10234 1.320344 ACAGAATAGGCGAGCGACCA 61.320 55.000 0.00 0.00 0.00 4.02
5219 10235 0.596083 CAGAATAGGCGAGCGACCAG 60.596 60.000 0.00 0.00 0.00 4.00
5220 10236 0.752009 AGAATAGGCGAGCGACCAGA 60.752 55.000 0.00 0.00 0.00 3.86
5221 10237 0.318275 GAATAGGCGAGCGACCAGAG 60.318 60.000 0.00 0.00 0.00 3.35
5222 10238 0.752009 AATAGGCGAGCGACCAGAGA 60.752 55.000 0.00 0.00 0.00 3.10
5223 10239 1.169661 ATAGGCGAGCGACCAGAGAG 61.170 60.000 0.00 0.00 0.00 3.20
5224 10240 4.863925 GGCGAGCGACCAGAGAGC 62.864 72.222 0.00 0.00 0.00 4.09
5225 10241 4.863925 GCGAGCGACCAGAGAGCC 62.864 72.222 0.00 0.00 0.00 4.70
5226 10242 4.544689 CGAGCGACCAGAGAGCCG 62.545 72.222 0.00 0.00 0.00 5.52
5227 10243 3.134792 GAGCGACCAGAGAGCCGA 61.135 66.667 0.00 0.00 0.00 5.54
5228 10244 3.404141 GAGCGACCAGAGAGCCGAC 62.404 68.421 0.00 0.00 0.00 4.79
5229 10245 3.749064 GCGACCAGAGAGCCGACA 61.749 66.667 0.00 0.00 0.00 4.35
5230 10246 2.179517 CGACCAGAGAGCCGACAC 59.820 66.667 0.00 0.00 0.00 3.67
5231 10247 2.179517 GACCAGAGAGCCGACACG 59.820 66.667 0.00 0.00 0.00 4.49
5232 10248 3.973267 GACCAGAGAGCCGACACGC 62.973 68.421 0.00 0.00 0.00 5.34
5249 10265 4.379243 CGGAAGCCACCAGAGCGT 62.379 66.667 0.00 0.00 34.64 5.07
5250 10266 2.435059 GGAAGCCACCAGAGCGTC 60.435 66.667 0.00 0.00 37.91 5.19
5251 10267 2.435059 GAAGCCACCAGAGCGTCC 60.435 66.667 0.00 0.00 33.32 4.79
5252 10268 3.240134 GAAGCCACCAGAGCGTCCA 62.240 63.158 0.00 0.00 33.32 4.02
5253 10269 3.245668 AAGCCACCAGAGCGTCCAG 62.246 63.158 0.00 0.00 34.64 3.86
5254 10270 4.767255 GCCACCAGAGCGTCCAGG 62.767 72.222 0.00 0.00 0.00 4.45
5255 10271 3.314331 CCACCAGAGCGTCCAGGT 61.314 66.667 0.00 0.00 33.91 4.00
5256 10272 1.982395 CCACCAGAGCGTCCAGGTA 60.982 63.158 0.00 0.00 32.01 3.08
5257 10273 1.541310 CCACCAGAGCGTCCAGGTAA 61.541 60.000 0.00 0.00 32.01 2.85
5258 10274 0.320374 CACCAGAGCGTCCAGGTAAA 59.680 55.000 0.00 0.00 32.01 2.01
5259 10275 0.608640 ACCAGAGCGTCCAGGTAAAG 59.391 55.000 0.00 0.00 31.32 1.85
5260 10276 0.741221 CCAGAGCGTCCAGGTAAAGC 60.741 60.000 0.00 0.00 0.00 3.51
5261 10277 0.247736 CAGAGCGTCCAGGTAAAGCT 59.752 55.000 1.43 1.43 41.29 3.74
5262 10278 0.247736 AGAGCGTCCAGGTAAAGCTG 59.752 55.000 2.16 2.16 38.39 4.24
5263 10279 0.246635 GAGCGTCCAGGTAAAGCTGA 59.753 55.000 10.65 0.00 38.39 4.26
5264 10280 0.685097 AGCGTCCAGGTAAAGCTGAA 59.315 50.000 10.65 0.00 36.73 3.02
5265 10281 1.079503 GCGTCCAGGTAAAGCTGAAG 58.920 55.000 10.65 3.13 0.00 3.02
5266 10282 1.079503 CGTCCAGGTAAAGCTGAAGC 58.920 55.000 10.65 0.00 42.49 3.86
5267 10283 1.454201 GTCCAGGTAAAGCTGAAGCC 58.546 55.000 10.65 0.00 43.38 4.35
5268 10284 0.036388 TCCAGGTAAAGCTGAAGCCG 60.036 55.000 10.65 0.00 43.38 5.52
5269 10285 1.026718 CCAGGTAAAGCTGAAGCCGG 61.027 60.000 10.65 0.00 43.38 6.13
5270 10286 0.321653 CAGGTAAAGCTGAAGCCGGT 60.322 55.000 1.90 0.00 43.38 5.28
5271 10287 0.036294 AGGTAAAGCTGAAGCCGGTC 60.036 55.000 1.90 0.00 43.38 4.79
5272 10288 0.321298 GGTAAAGCTGAAGCCGGTCA 60.321 55.000 1.90 0.00 43.38 4.02
5273 10289 0.796927 GTAAAGCTGAAGCCGGTCAC 59.203 55.000 1.90 0.00 43.38 3.67
5274 10290 0.669318 TAAAGCTGAAGCCGGTCACG 60.669 55.000 1.90 0.00 43.38 4.35
5275 10291 2.377628 AAAGCTGAAGCCGGTCACGA 62.378 55.000 1.90 0.00 43.38 4.35
5276 10292 3.112709 GCTGAAGCCGGTCACGAC 61.113 66.667 1.90 0.00 44.60 4.34
5285 10301 4.083862 GGTCACGACCCCTCAGCC 62.084 72.222 4.78 0.00 45.68 4.85
5286 10302 2.997897 GTCACGACCCCTCAGCCT 60.998 66.667 0.00 0.00 0.00 4.58
5287 10303 1.681327 GTCACGACCCCTCAGCCTA 60.681 63.158 0.00 0.00 0.00 3.93
5288 10304 1.379977 TCACGACCCCTCAGCCTAG 60.380 63.158 0.00 0.00 0.00 3.02
5289 10305 2.760385 ACGACCCCTCAGCCTAGC 60.760 66.667 0.00 0.00 0.00 3.42
5290 10306 3.905678 CGACCCCTCAGCCTAGCG 61.906 72.222 0.00 0.00 0.00 4.26
5291 10307 2.442272 GACCCCTCAGCCTAGCGA 60.442 66.667 0.00 0.00 0.00 4.93
5292 10308 2.443016 ACCCCTCAGCCTAGCGAG 60.443 66.667 0.00 0.00 0.00 5.03
5293 10309 3.922640 CCCCTCAGCCTAGCGAGC 61.923 72.222 0.00 0.00 31.62 5.03
5294 10310 4.277593 CCCTCAGCCTAGCGAGCG 62.278 72.222 0.00 0.00 34.64 5.03
5295 10311 4.277593 CCTCAGCCTAGCGAGCGG 62.278 72.222 0.00 0.00 34.64 5.52
5296 10312 3.212682 CTCAGCCTAGCGAGCGGA 61.213 66.667 0.00 0.00 34.64 5.54
5297 10313 2.519541 TCAGCCTAGCGAGCGGAT 60.520 61.111 0.00 0.00 34.64 4.18
5298 10314 2.355599 CAGCCTAGCGAGCGGATG 60.356 66.667 0.00 0.00 34.64 3.51
5299 10315 4.292178 AGCCTAGCGAGCGGATGC 62.292 66.667 0.00 0.00 43.24 3.91
5309 10325 2.512286 GCGGATGCTAGTGCTGCA 60.512 61.111 0.00 0.00 44.95 4.41
5310 10326 2.108514 GCGGATGCTAGTGCTGCAA 61.109 57.895 2.77 0.00 44.01 4.08
5311 10327 2.012237 CGGATGCTAGTGCTGCAAG 58.988 57.895 2.77 0.00 44.01 4.01
5312 10328 0.460811 CGGATGCTAGTGCTGCAAGA 60.461 55.000 2.77 0.00 44.01 3.02
5313 10329 1.742761 GGATGCTAGTGCTGCAAGAA 58.257 50.000 2.77 0.00 44.01 2.52
5314 10330 2.086869 GGATGCTAGTGCTGCAAGAAA 58.913 47.619 2.77 0.00 44.01 2.52
5315 10331 2.097142 GGATGCTAGTGCTGCAAGAAAG 59.903 50.000 2.77 0.55 44.01 2.62
5316 10332 0.877071 TGCTAGTGCTGCAAGAAAGC 59.123 50.000 2.77 11.45 41.22 3.51
5317 10333 0.169894 GCTAGTGCTGCAAGAAAGCC 59.830 55.000 2.77 0.00 40.06 4.35
5318 10334 1.527034 CTAGTGCTGCAAGAAAGCCA 58.473 50.000 2.77 0.00 40.06 4.75
5319 10335 1.467734 CTAGTGCTGCAAGAAAGCCAG 59.532 52.381 2.77 0.00 40.06 4.85
5320 10336 0.179009 AGTGCTGCAAGAAAGCCAGA 60.179 50.000 2.77 0.00 40.06 3.86
5321 10337 0.670162 GTGCTGCAAGAAAGCCAGAA 59.330 50.000 2.77 0.00 40.06 3.02
5322 10338 1.067516 GTGCTGCAAGAAAGCCAGAAA 59.932 47.619 2.77 0.00 40.06 2.52
5323 10339 1.965643 TGCTGCAAGAAAGCCAGAAAT 59.034 42.857 0.00 0.00 40.06 2.17
5324 10340 2.366266 TGCTGCAAGAAAGCCAGAAATT 59.634 40.909 0.00 0.00 40.06 1.82
5325 10341 3.181463 TGCTGCAAGAAAGCCAGAAATTT 60.181 39.130 0.00 0.00 40.06 1.82
5326 10342 3.185797 GCTGCAAGAAAGCCAGAAATTTG 59.814 43.478 0.00 0.00 34.07 2.32
5327 10343 4.624015 CTGCAAGAAAGCCAGAAATTTGA 58.376 39.130 0.00 0.00 34.07 2.69
5328 10344 5.021033 TGCAAGAAAGCCAGAAATTTGAA 57.979 34.783 0.00 0.00 0.00 2.69
5329 10345 5.051816 TGCAAGAAAGCCAGAAATTTGAAG 58.948 37.500 0.00 0.00 0.00 3.02
5330 10346 5.163426 TGCAAGAAAGCCAGAAATTTGAAGA 60.163 36.000 0.00 0.00 0.00 2.87
5331 10347 5.754890 GCAAGAAAGCCAGAAATTTGAAGAA 59.245 36.000 0.00 0.00 0.00 2.52
5332 10348 6.292542 GCAAGAAAGCCAGAAATTTGAAGAAC 60.293 38.462 0.00 0.00 0.00 3.01
5333 10349 5.523369 AGAAAGCCAGAAATTTGAAGAACG 58.477 37.500 0.00 0.00 0.00 3.95
5334 10350 5.299279 AGAAAGCCAGAAATTTGAAGAACGA 59.701 36.000 0.00 0.00 0.00 3.85
5335 10351 5.514274 AAGCCAGAAATTTGAAGAACGAA 57.486 34.783 0.00 0.00 0.00 3.85
5336 10352 5.712152 AGCCAGAAATTTGAAGAACGAAT 57.288 34.783 0.00 0.00 34.37 3.34
5337 10353 5.703876 AGCCAGAAATTTGAAGAACGAATC 58.296 37.500 0.00 0.00 31.98 2.52
5338 10354 5.241506 AGCCAGAAATTTGAAGAACGAATCA 59.758 36.000 0.00 0.00 31.98 2.57
5339 10355 5.570589 GCCAGAAATTTGAAGAACGAATCAG 59.429 40.000 0.00 0.00 31.98 2.90
5340 10356 6.568462 GCCAGAAATTTGAAGAACGAATCAGA 60.568 38.462 0.00 0.00 31.98 3.27
5341 10357 7.362662 CCAGAAATTTGAAGAACGAATCAGAA 58.637 34.615 0.00 0.00 31.98 3.02
5342 10358 7.536622 CCAGAAATTTGAAGAACGAATCAGAAG 59.463 37.037 0.00 0.00 31.98 2.85
5343 10359 7.060403 CAGAAATTTGAAGAACGAATCAGAAGC 59.940 37.037 0.00 0.00 31.98 3.86
5344 10360 5.947228 ATTTGAAGAACGAATCAGAAGCA 57.053 34.783 0.00 0.00 0.00 3.91
5345 10361 4.732285 TTGAAGAACGAATCAGAAGCAC 57.268 40.909 0.00 0.00 0.00 4.40
5346 10362 2.731451 TGAAGAACGAATCAGAAGCACG 59.269 45.455 0.00 0.00 0.00 5.34
5347 10363 2.440539 AGAACGAATCAGAAGCACGT 57.559 45.000 0.00 0.00 38.81 4.49
5348 10364 2.329379 AGAACGAATCAGAAGCACGTC 58.671 47.619 0.00 0.00 36.20 4.34
5349 10365 1.057847 GAACGAATCAGAAGCACGTCG 59.942 52.381 0.00 0.00 36.20 5.12
5350 10366 1.341802 CGAATCAGAAGCACGTCGC 59.658 57.895 0.00 2.28 42.91 5.19
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
251 2589 7.386848 TGGTACTTTCAGTTTTGTAGATACTGC 59.613 37.037 0.00 0.00 39.24 4.40
486 3281 2.660189 CCAAACCATGGCTCAATGAC 57.340 50.000 13.04 0.00 43.80 3.06
703 3775 6.928492 TCGATATGCAGCATACTTAATTCACA 59.072 34.615 17.64 0.00 0.00 3.58
755 3827 3.059884 CAAGCGAGTAAAGAACAGCTCA 58.940 45.455 0.00 0.00 41.51 4.26
835 3907 0.598065 CCTAACAAAGGCAGGCACAC 59.402 55.000 0.00 0.00 38.97 3.82
855 3931 3.257624 CCAAGCAAGATTTCTTTGGCTCT 59.742 43.478 5.83 0.00 35.13 4.09
935 4061 3.128589 TCTCTTTGGTGCTTGTGTGTTTC 59.871 43.478 0.00 0.00 0.00 2.78
1367 4557 1.134699 TGATGCGATCCTTCAGGTCAC 60.135 52.381 0.00 0.00 36.34 3.67
1521 4717 0.034670 ACTTGGCAAGCTCATCCCTC 60.035 55.000 26.45 0.00 0.00 4.30
1530 4726 1.588082 CACCATCCACTTGGCAAGC 59.412 57.895 26.45 0.00 40.68 4.01
1605 4807 3.380142 CAGTGTTGTTTTTCCCAATCCG 58.620 45.455 0.00 0.00 0.00 4.18
1794 4999 5.473931 TGCAGTAGTTCTCTTAGCTTTGAG 58.526 41.667 0.00 0.00 0.00 3.02
1860 5074 3.508402 TGACTCAAACACGAGGCACTATA 59.492 43.478 0.00 0.00 46.33 1.31
1912 5132 7.279090 TCTGAATCGAGTTGTTTTCTTTGTGTA 59.721 33.333 0.00 0.00 0.00 2.90
1935 5156 5.049818 GCCTAGAATTGTTCAATCCGATCTG 60.050 44.000 0.00 0.00 0.00 2.90
1938 5159 4.780815 TGCCTAGAATTGTTCAATCCGAT 58.219 39.130 0.00 0.00 0.00 4.18
1957 5178 2.629051 AGCGTTAGTGTTAAGGATGCC 58.371 47.619 0.00 0.00 0.00 4.40
2073 5352 9.950496 AGTCTGTGTACTTATCAGAATTTTGAT 57.050 29.630 15.14 15.14 39.42 2.57
2079 5358 8.354711 TCAGAAGTCTGTGTACTTATCAGAAT 57.645 34.615 8.14 7.97 44.12 2.40
2105 5384 9.574516 GGAGGATTTGGACACATATATTACTTT 57.425 33.333 0.00 0.00 0.00 2.66
2107 5386 8.275187 TGGAGGATTTGGACACATATATTACT 57.725 34.615 0.00 0.00 0.00 2.24
2108 5387 9.520515 AATGGAGGATTTGGACACATATATTAC 57.479 33.333 0.00 0.00 0.00 1.89
2112 5391 8.723365 AGTTAATGGAGGATTTGGACACATATA 58.277 33.333 0.00 0.00 0.00 0.86
2114 5393 6.969043 AGTTAATGGAGGATTTGGACACATA 58.031 36.000 0.00 0.00 0.00 2.29
2117 5396 5.253330 TGAGTTAATGGAGGATTTGGACAC 58.747 41.667 0.00 0.00 0.00 3.67
2118 5397 5.250543 TCTGAGTTAATGGAGGATTTGGACA 59.749 40.000 0.00 0.00 0.00 4.02
2119 5398 5.745227 TCTGAGTTAATGGAGGATTTGGAC 58.255 41.667 0.00 0.00 0.00 4.02
2120 5399 6.387192 TTCTGAGTTAATGGAGGATTTGGA 57.613 37.500 0.00 0.00 0.00 3.53
2121 5400 7.651027 AATTCTGAGTTAATGGAGGATTTGG 57.349 36.000 0.00 0.00 0.00 3.28
2174 6005 1.160137 AAGGTTGCAAGCTAGCTTCG 58.840 50.000 29.86 21.34 35.36 3.79
2191 6036 8.562892 CATTCACTGCTTATGTTTCCCTATAAG 58.437 37.037 0.00 0.00 39.01 1.73
2192 6037 8.052748 ACATTCACTGCTTATGTTTCCCTATAA 58.947 33.333 0.00 0.00 0.00 0.98
2234 6083 6.039493 CCGACACATAGTACTTAACTGGAGAT 59.961 42.308 0.00 0.00 39.39 2.75
2235 6084 5.356190 CCGACACATAGTACTTAACTGGAGA 59.644 44.000 0.00 0.00 39.39 3.71
2309 6178 5.716228 TGCCATGAAACTCCAATATCACTTT 59.284 36.000 0.00 0.00 0.00 2.66
2490 6368 5.175127 ACATCAATGATGCGTGTAGTAACA 58.825 37.500 21.92 0.00 43.15 2.41
2727 6605 2.103941 CTCCCACTCTTCCTTGATAGCC 59.896 54.545 0.00 0.00 0.00 3.93
2984 6864 7.807687 TTGTTGATAAGCTCGTAGAAGTAAC 57.192 36.000 0.00 0.00 34.09 2.50
3069 6949 9.162793 GAAATAATAAGTTCAAGCATCATGTCG 57.837 33.333 0.00 0.00 30.10 4.35
3125 7005 4.323477 TTTGGCCTCCACCGACCG 62.323 66.667 3.32 0.00 30.78 4.79
3129 7009 1.184970 AATTGGTTTGGCCTCCACCG 61.185 55.000 3.32 0.00 38.35 4.94
3146 7026 1.347062 ACCCCGGTGATTTTGCAAAT 58.653 45.000 13.65 3.23 0.00 2.32
3159 7039 2.474612 CCGCCGAATAAAACCCCGG 61.475 63.158 0.00 0.00 44.34 5.73
3161 7041 0.464193 TAGCCGCCGAATAAAACCCC 60.464 55.000 0.00 0.00 0.00 4.95
3225 7105 4.028852 TCGAACATGACTTAGATCCACG 57.971 45.455 0.00 0.00 0.00 4.94
3280 7160 2.906389 ACTGATCAAGAGTGGGCAAGTA 59.094 45.455 0.00 0.00 0.00 2.24
3328 7208 2.574322 CTTCAAATCCTCGCAACGTTG 58.426 47.619 23.90 23.90 0.00 4.10
3331 7211 1.438651 TCCTTCAAATCCTCGCAACG 58.561 50.000 0.00 0.00 0.00 4.10
3336 7216 8.158169 TCATATCAAAATCCTTCAAATCCTCG 57.842 34.615 0.00 0.00 0.00 4.63
3351 7231 9.253832 AGTTTGTCCATACCATTCATATCAAAA 57.746 29.630 0.00 0.00 0.00 2.44
3376 7256 7.229581 AGTTCAGGTACTTTAGTTGGACTAG 57.770 40.000 0.00 0.00 34.60 2.57
3429 7309 2.636893 ACCTAGCATCATGATCCCTGAC 59.363 50.000 4.86 0.00 0.00 3.51
3532 7412 2.123589 TGTCAACCACTCTCCTTCCAA 58.876 47.619 0.00 0.00 0.00 3.53
3534 7414 2.171341 GTGTCAACCACTCTCCTTCC 57.829 55.000 0.00 0.00 41.11 3.46
3605 7488 7.453752 ACACATCCGTTATACTGGAGGTAATAT 59.546 37.037 8.86 0.00 46.67 1.28
3643 7526 3.394606 TCCTTCAAACTTGTTAGGCTCCT 59.605 43.478 0.00 0.00 33.87 3.69
3685 7568 6.150976 ACTTGATCAGATATTCCGTTTGCAAA 59.849 34.615 8.05 8.05 0.00 3.68
3722 7605 1.005340 CGCCTCTTCACATCTCTTGC 58.995 55.000 0.00 0.00 0.00 4.01
3802 7691 3.056328 GTCAAGGGAAGCACCGCC 61.056 66.667 0.00 0.00 40.11 6.13
3860 7753 4.002906 TCTCTGTAATGCGTGGAAAACT 57.997 40.909 0.00 0.00 0.00 2.66
4061 7965 4.141158 AGTCCAAAACCTTCAGATTCAGGT 60.141 41.667 0.00 0.00 46.04 4.00
4132 8036 2.034066 TTCCTCAAGCTTGGGCGG 59.966 61.111 25.73 21.48 44.37 6.13
4235 8142 7.646922 TCGCATCTTCATCATCAAGATATATCG 59.353 37.037 7.08 0.00 38.33 2.92
4276 8183 0.392729 ATCTCAGCAGTTGCAGCCTC 60.393 55.000 6.90 0.00 45.16 4.70
4285 8192 2.228545 TCAGTCCTGATCTCAGCAGT 57.771 50.000 1.51 0.00 42.47 4.40
4301 8208 2.409870 GGATTGGCACCCGCTTCAG 61.410 63.158 0.00 0.00 38.60 3.02
4342 8249 2.348472 TCACCATCTCCCTTGGTCTTT 58.652 47.619 0.00 0.00 45.71 2.52
4347 8364 2.860009 CATCATCACCATCTCCCTTGG 58.140 52.381 0.00 0.00 40.26 3.61
4363 8380 5.831525 AGCATTTTAATCCTCATCAGCATCA 59.168 36.000 0.00 0.00 0.00 3.07
4364 8381 6.328641 AGCATTTTAATCCTCATCAGCATC 57.671 37.500 0.00 0.00 0.00 3.91
4365 8382 6.726490 AAGCATTTTAATCCTCATCAGCAT 57.274 33.333 0.00 0.00 0.00 3.79
4366 8383 6.602803 TGTAAGCATTTTAATCCTCATCAGCA 59.397 34.615 0.00 0.00 0.00 4.41
4388 8416 5.477607 TTTAGCACCTCTAGCAGTTTGTA 57.522 39.130 0.00 0.00 0.00 2.41
4410 8438 9.753674 TGAAAGGGTGAATGACTAGAATATTTT 57.246 29.630 0.00 0.00 0.00 1.82
4412 8440 9.927081 AATGAAAGGGTGAATGACTAGAATATT 57.073 29.630 0.00 0.00 0.00 1.28
4421 8449 5.452078 TTGACAATGAAAGGGTGAATGAC 57.548 39.130 0.00 0.00 0.00 3.06
4436 8464 1.535028 TGCGACGATGCTTTTGACAAT 59.465 42.857 0.00 0.00 35.36 2.71
4439 8467 2.247311 AATGCGACGATGCTTTTGAC 57.753 45.000 0.00 0.00 35.36 3.18
4441 8469 5.685195 ATTAAAATGCGACGATGCTTTTG 57.315 34.783 14.45 0.00 40.16 2.44
4442 8470 6.704512 AAATTAAAATGCGACGATGCTTTT 57.295 29.167 0.00 10.14 42.06 2.27
4443 8471 6.586082 AGAAAATTAAAATGCGACGATGCTTT 59.414 30.769 0.00 0.00 34.11 3.51
4470 8499 6.407299 GGTCCAGGAATAGACGTATTTTGGTA 60.407 42.308 0.00 2.39 36.26 3.25
4481 8510 6.926630 ATAAGATCAGGTCCAGGAATAGAC 57.073 41.667 0.00 0.00 0.00 2.59
4537 8583 2.091885 ACATACCCTGGATCGGCAAAAT 60.092 45.455 0.00 0.00 0.00 1.82
4568 8614 5.344743 TGGCATTCCAAACAAAGTAAACA 57.655 34.783 0.00 0.00 39.99 2.83
4585 8631 2.194056 CTCCTTCCGGCATGGCAT 59.806 61.111 20.37 0.00 37.80 4.40
4593 8639 2.125512 CTTCGTGCCTCCTTCCGG 60.126 66.667 0.00 0.00 0.00 5.14
4606 8652 2.594541 GCGAGGAATACTGGCTTCG 58.405 57.895 0.00 0.00 46.19 3.79
4612 8658 1.655484 TGCATGTGCGAGGAATACTG 58.345 50.000 0.01 0.00 45.83 2.74
4614 8660 2.744787 CTTGCATGTGCGAGGAATAC 57.255 50.000 13.35 0.00 46.34 1.89
4627 8681 1.317613 TTTCAGGTTGTCGCTTGCAT 58.682 45.000 0.00 0.00 0.00 3.96
4632 8686 2.639065 TCAGTTTTTCAGGTTGTCGCT 58.361 42.857 0.00 0.00 0.00 4.93
4633 8687 3.363178 CTTCAGTTTTTCAGGTTGTCGC 58.637 45.455 0.00 0.00 0.00 5.19
4640 8694 8.137437 TCTTTGATTTAGCTTCAGTTTTTCAGG 58.863 33.333 0.00 0.00 0.00 3.86
4657 8714 6.756221 ACGACTTAGTAGGTGTCTTTGATTT 58.244 36.000 0.00 0.00 0.00 2.17
4660 8717 6.882610 TTACGACTTAGTAGGTGTCTTTGA 57.117 37.500 0.00 0.00 0.00 2.69
4663 8720 7.150640 CCTTTTTACGACTTAGTAGGTGTCTT 58.849 38.462 0.00 0.00 0.00 3.01
4672 8729 5.069516 TGAGACCACCTTTTTACGACTTAGT 59.930 40.000 0.00 0.00 0.00 2.24
4673 8730 5.535333 TGAGACCACCTTTTTACGACTTAG 58.465 41.667 0.00 0.00 0.00 2.18
4674 8731 5.510179 CCTGAGACCACCTTTTTACGACTTA 60.510 44.000 0.00 0.00 0.00 2.24
4675 8732 4.377897 CTGAGACCACCTTTTTACGACTT 58.622 43.478 0.00 0.00 0.00 3.01
4676 8733 3.244112 CCTGAGACCACCTTTTTACGACT 60.244 47.826 0.00 0.00 0.00 4.18
4677 8734 3.064931 CCTGAGACCACCTTTTTACGAC 58.935 50.000 0.00 0.00 0.00 4.34
4678 8735 2.701951 ACCTGAGACCACCTTTTTACGA 59.298 45.455 0.00 0.00 0.00 3.43
4681 8738 4.232091 AGAGACCTGAGACCACCTTTTTA 58.768 43.478 0.00 0.00 0.00 1.52
4696 8753 3.826157 CAGTTGAGACTTGAGAGAGACCT 59.174 47.826 0.00 0.00 32.54 3.85
4714 8771 6.176014 AGGAAGTAGTAGCAACTTTCAGTT 57.824 37.500 0.00 0.00 39.39 3.16
4715 8772 5.810080 AGGAAGTAGTAGCAACTTTCAGT 57.190 39.130 0.00 0.00 37.31 3.41
4731 8788 9.383519 CAATCAAACACAGTGTATATAGGAAGT 57.616 33.333 6.63 0.00 0.00 3.01
4732 8789 8.338259 GCAATCAAACACAGTGTATATAGGAAG 58.662 37.037 6.63 0.00 0.00 3.46
4734 8791 6.765989 GGCAATCAAACACAGTGTATATAGGA 59.234 38.462 6.63 0.00 0.00 2.94
4735 8792 6.767902 AGGCAATCAAACACAGTGTATATAGG 59.232 38.462 6.63 0.00 0.00 2.57
4736 8793 7.712639 AGAGGCAATCAAACACAGTGTATATAG 59.287 37.037 6.63 0.00 0.00 1.31
4737 8794 7.564793 AGAGGCAATCAAACACAGTGTATATA 58.435 34.615 6.63 0.00 0.00 0.86
4739 8796 5.804639 AGAGGCAATCAAACACAGTGTATA 58.195 37.500 6.63 0.00 0.00 1.47
4741 8798 4.065088 GAGAGGCAATCAAACACAGTGTA 58.935 43.478 6.63 0.00 0.00 2.90
4743 8800 3.144506 AGAGAGGCAATCAAACACAGTG 58.855 45.455 0.00 0.00 0.00 3.66
4744 8801 3.498774 AGAGAGGCAATCAAACACAGT 57.501 42.857 0.00 0.00 0.00 3.55
4745 8802 3.190118 GGAAGAGAGGCAATCAAACACAG 59.810 47.826 0.00 0.00 0.00 3.66
4746 8803 3.149196 GGAAGAGAGGCAATCAAACACA 58.851 45.455 0.00 0.00 0.00 3.72
4760 8817 8.138928 TCTGAATCATCAAAGTAAGGAAGAGA 57.861 34.615 0.00 0.00 34.49 3.10
4763 8820 8.961294 AGATCTGAATCATCAAAGTAAGGAAG 57.039 34.615 0.00 0.00 34.49 3.46
4793 9807 6.759827 GCGGAACCTTATTAACAGTGATAAGA 59.240 38.462 14.41 0.00 36.06 2.10
4816 9830 1.079127 ACTCCAATTCCGACAGGCG 60.079 57.895 0.00 0.00 37.47 5.52
4827 9841 3.961408 AGCGTAGGTATTCAGACTCCAAT 59.039 43.478 0.00 0.00 35.08 3.16
4828 9842 3.362706 AGCGTAGGTATTCAGACTCCAA 58.637 45.455 0.00 0.00 35.08 3.53
4829 9843 3.014304 AGCGTAGGTATTCAGACTCCA 57.986 47.619 0.00 0.00 35.08 3.86
4844 9858 6.753279 AGTACAAGCGAATTAACAATAGCGTA 59.247 34.615 0.00 0.00 32.25 4.42
4846 9860 6.019801 AGAGTACAAGCGAATTAACAATAGCG 60.020 38.462 0.00 0.00 32.25 4.26
4890 9904 3.217626 GGAGCTTAGATCCCACCAAATG 58.782 50.000 5.00 0.00 0.00 2.32
4894 9908 2.196742 ATGGAGCTTAGATCCCACCA 57.803 50.000 14.39 0.00 35.86 4.17
4900 9914 4.320057 CCGAATGCAAATGGAGCTTAGATC 60.320 45.833 0.00 0.00 0.00 2.75
4909 9923 4.550076 AAAAATCCCGAATGCAAATGGA 57.450 36.364 0.00 0.00 0.00 3.41
4934 9948 7.648908 CAGAAATCAAGTATTCAGCACACAAAA 59.351 33.333 0.00 0.00 0.00 2.44
4935 9949 7.140705 CAGAAATCAAGTATTCAGCACACAAA 58.859 34.615 0.00 0.00 0.00 2.83
4936 9950 6.262944 ACAGAAATCAAGTATTCAGCACACAA 59.737 34.615 0.00 0.00 0.00 3.33
4937 9951 5.764686 ACAGAAATCAAGTATTCAGCACACA 59.235 36.000 0.00 0.00 0.00 3.72
4938 9952 6.246420 ACAGAAATCAAGTATTCAGCACAC 57.754 37.500 0.00 0.00 0.00 3.82
4990 10004 5.163478 GGTAGGTATCACCGACACAGTAATT 60.163 44.000 10.21 0.00 44.40 1.40
5003 10017 5.258456 TCGACTTTCATGGTAGGTATCAC 57.742 43.478 0.00 0.00 0.00 3.06
5027 10043 7.865889 TCGAAGAACACACATCACATATATACC 59.134 37.037 0.00 0.00 0.00 2.73
5038 10054 4.631813 AGCCTATTTCGAAGAACACACATC 59.368 41.667 0.00 0.00 45.90 3.06
5060 10076 2.234300 TCTATAAAGCGGGGCGAAAG 57.766 50.000 0.00 0.00 0.00 2.62
5061 10077 2.922740 ATCTATAAAGCGGGGCGAAA 57.077 45.000 0.00 0.00 0.00 3.46
5062 10078 4.312443 CTTTATCTATAAAGCGGGGCGAA 58.688 43.478 9.01 0.00 41.69 4.70
5063 10079 3.921677 CTTTATCTATAAAGCGGGGCGA 58.078 45.455 9.01 0.00 41.69 5.54
5075 10091 7.989741 GGCTGTATGGACATATGCTTTATCTAT 59.010 37.037 1.58 0.00 34.24 1.98
5076 10092 7.038373 TGGCTGTATGGACATATGCTTTATCTA 60.038 37.037 1.58 0.00 34.24 1.98
5077 10093 6.176183 GGCTGTATGGACATATGCTTTATCT 58.824 40.000 1.58 0.00 34.24 1.98
5078 10094 5.939883 TGGCTGTATGGACATATGCTTTATC 59.060 40.000 1.58 0.00 34.24 1.75
5079 10095 5.879763 TGGCTGTATGGACATATGCTTTAT 58.120 37.500 1.58 0.00 34.24 1.40
5080 10096 5.303259 TGGCTGTATGGACATATGCTTTA 57.697 39.130 1.58 0.00 34.24 1.85
5081 10097 4.169059 TGGCTGTATGGACATATGCTTT 57.831 40.909 1.58 0.00 34.24 3.51
5082 10098 3.862877 TGGCTGTATGGACATATGCTT 57.137 42.857 1.58 0.00 34.24 3.91
5083 10099 3.137176 ACTTGGCTGTATGGACATATGCT 59.863 43.478 1.58 0.00 34.24 3.79
5084 10100 3.480470 ACTTGGCTGTATGGACATATGC 58.520 45.455 1.58 9.98 34.24 3.14
5085 10101 4.512944 GTGACTTGGCTGTATGGACATATG 59.487 45.833 0.00 0.00 34.24 1.78
5086 10102 4.164030 TGTGACTTGGCTGTATGGACATAT 59.836 41.667 0.00 0.00 34.24 1.78
5087 10103 3.517500 TGTGACTTGGCTGTATGGACATA 59.482 43.478 0.00 0.00 34.24 2.29
5088 10104 2.305635 TGTGACTTGGCTGTATGGACAT 59.694 45.455 0.00 0.00 34.24 3.06
5089 10105 1.696884 TGTGACTTGGCTGTATGGACA 59.303 47.619 0.00 0.00 0.00 4.02
5090 10106 2.472695 TGTGACTTGGCTGTATGGAC 57.527 50.000 0.00 0.00 0.00 4.02
5091 10107 2.552155 GGTTGTGACTTGGCTGTATGGA 60.552 50.000 0.00 0.00 0.00 3.41
5092 10108 1.812571 GGTTGTGACTTGGCTGTATGG 59.187 52.381 0.00 0.00 0.00 2.74
5093 10109 2.485426 CTGGTTGTGACTTGGCTGTATG 59.515 50.000 0.00 0.00 0.00 2.39
5094 10110 2.106511 ACTGGTTGTGACTTGGCTGTAT 59.893 45.455 0.00 0.00 0.00 2.29
5095 10111 1.488812 ACTGGTTGTGACTTGGCTGTA 59.511 47.619 0.00 0.00 0.00 2.74
5096 10112 0.255890 ACTGGTTGTGACTTGGCTGT 59.744 50.000 0.00 0.00 0.00 4.40
5097 10113 0.947244 GACTGGTTGTGACTTGGCTG 59.053 55.000 0.00 0.00 0.00 4.85
5098 10114 0.546122 TGACTGGTTGTGACTTGGCT 59.454 50.000 0.00 0.00 0.00 4.75
5099 10115 0.663153 GTGACTGGTTGTGACTTGGC 59.337 55.000 0.00 0.00 30.00 4.52
5100 10116 2.036958 TGTGACTGGTTGTGACTTGG 57.963 50.000 0.00 0.00 33.86 3.61
5101 10117 4.433186 TTTTGTGACTGGTTGTGACTTG 57.567 40.909 0.00 0.00 33.86 3.16
5102 10118 4.764823 TCTTTTTGTGACTGGTTGTGACTT 59.235 37.500 0.00 0.00 33.86 3.01
5103 10119 4.331968 TCTTTTTGTGACTGGTTGTGACT 58.668 39.130 0.00 0.00 33.86 3.41
5104 10120 4.695217 TCTTTTTGTGACTGGTTGTGAC 57.305 40.909 0.00 0.00 33.31 3.67
5105 10121 5.713792 TTTCTTTTTGTGACTGGTTGTGA 57.286 34.783 0.00 0.00 0.00 3.58
5106 10122 6.672836 GCATTTTCTTTTTGTGACTGGTTGTG 60.673 38.462 0.00 0.00 0.00 3.33
5107 10123 5.351189 GCATTTTCTTTTTGTGACTGGTTGT 59.649 36.000 0.00 0.00 0.00 3.32
5108 10124 5.581874 AGCATTTTCTTTTTGTGACTGGTTG 59.418 36.000 0.00 0.00 0.00 3.77
5109 10125 5.581874 CAGCATTTTCTTTTTGTGACTGGTT 59.418 36.000 0.00 0.00 0.00 3.67
5110 10126 5.111293 CAGCATTTTCTTTTTGTGACTGGT 58.889 37.500 0.00 0.00 0.00 4.00
5111 10127 4.508861 CCAGCATTTTCTTTTTGTGACTGG 59.491 41.667 0.00 0.00 35.45 4.00
5112 10128 4.508861 CCCAGCATTTTCTTTTTGTGACTG 59.491 41.667 0.00 0.00 0.00 3.51
5113 10129 4.443315 CCCCAGCATTTTCTTTTTGTGACT 60.443 41.667 0.00 0.00 0.00 3.41
5114 10130 3.809279 CCCCAGCATTTTCTTTTTGTGAC 59.191 43.478 0.00 0.00 0.00 3.67
5115 10131 3.743899 GCCCCAGCATTTTCTTTTTGTGA 60.744 43.478 0.00 0.00 39.53 3.58
5116 10132 2.549329 GCCCCAGCATTTTCTTTTTGTG 59.451 45.455 0.00 0.00 39.53 3.33
5117 10133 2.487086 GGCCCCAGCATTTTCTTTTTGT 60.487 45.455 0.00 0.00 42.56 2.83
5118 10134 2.153645 GGCCCCAGCATTTTCTTTTTG 58.846 47.619 0.00 0.00 42.56 2.44
5119 10135 1.773653 TGGCCCCAGCATTTTCTTTTT 59.226 42.857 0.00 0.00 42.56 1.94
5120 10136 1.072173 GTGGCCCCAGCATTTTCTTTT 59.928 47.619 0.00 0.00 42.56 2.27
5121 10137 0.686789 GTGGCCCCAGCATTTTCTTT 59.313 50.000 0.00 0.00 42.56 2.52
5122 10138 0.471591 TGTGGCCCCAGCATTTTCTT 60.472 50.000 0.00 0.00 42.56 2.52
5123 10139 0.901580 CTGTGGCCCCAGCATTTTCT 60.902 55.000 1.00 0.00 42.56 2.52
5124 10140 1.593265 CTGTGGCCCCAGCATTTTC 59.407 57.895 1.00 0.00 42.56 2.29
5125 10141 3.795905 CTGTGGCCCCAGCATTTT 58.204 55.556 1.00 0.00 42.56 1.82
5131 10147 1.909781 ATTTGTGCTGTGGCCCCAG 60.910 57.895 11.40 11.40 37.74 4.45
5132 10148 2.200930 ATTTGTGCTGTGGCCCCA 59.799 55.556 0.00 0.00 37.74 4.96
5133 10149 2.658422 CATTTGTGCTGTGGCCCC 59.342 61.111 0.00 0.00 37.74 5.80
5134 10150 2.047939 GCATTTGTGCTGTGGCCC 60.048 61.111 0.00 0.00 37.74 5.80
5135 10151 2.431260 CGCATTTGTGCTGTGGCC 60.431 61.111 0.00 0.00 37.74 5.36
5143 10159 1.727880 CTTCATTTGGGCGCATTTGTG 59.272 47.619 10.83 1.99 0.00 3.33
5144 10160 1.338011 CCTTCATTTGGGCGCATTTGT 60.338 47.619 10.83 0.00 0.00 2.83
5145 10161 1.067000 TCCTTCATTTGGGCGCATTTG 60.067 47.619 10.83 5.71 0.00 2.32
5146 10162 1.265236 TCCTTCATTTGGGCGCATTT 58.735 45.000 10.83 0.00 0.00 2.32
5147 10163 1.265236 TTCCTTCATTTGGGCGCATT 58.735 45.000 10.83 0.00 0.00 3.56
5148 10164 1.205417 CTTTCCTTCATTTGGGCGCAT 59.795 47.619 10.83 0.00 0.00 4.73
5149 10165 0.602562 CTTTCCTTCATTTGGGCGCA 59.397 50.000 10.83 0.00 0.00 6.09
5150 10166 0.887933 TCTTTCCTTCATTTGGGCGC 59.112 50.000 0.00 0.00 0.00 6.53
5151 10167 2.436417 TCTCTTTCCTTCATTTGGGCG 58.564 47.619 0.00 0.00 0.00 6.13
5152 10168 4.039124 TGTTTCTCTTTCCTTCATTTGGGC 59.961 41.667 0.00 0.00 0.00 5.36
5153 10169 5.789643 TGTTTCTCTTTCCTTCATTTGGG 57.210 39.130 0.00 0.00 0.00 4.12
5154 10170 9.762933 TTTTATGTTTCTCTTTCCTTCATTTGG 57.237 29.630 0.00 0.00 0.00 3.28
5156 10172 9.987272 CCTTTTATGTTTCTCTTTCCTTCATTT 57.013 29.630 0.00 0.00 0.00 2.32
5157 10173 8.090831 GCCTTTTATGTTTCTCTTTCCTTCATT 58.909 33.333 0.00 0.00 0.00 2.57
5158 10174 7.310052 GGCCTTTTATGTTTCTCTTTCCTTCAT 60.310 37.037 0.00 0.00 0.00 2.57
5159 10175 6.015434 GGCCTTTTATGTTTCTCTTTCCTTCA 60.015 38.462 0.00 0.00 0.00 3.02
5160 10176 6.015434 TGGCCTTTTATGTTTCTCTTTCCTTC 60.015 38.462 3.32 0.00 0.00 3.46
5161 10177 5.838521 TGGCCTTTTATGTTTCTCTTTCCTT 59.161 36.000 3.32 0.00 0.00 3.36
5162 10178 5.243954 GTGGCCTTTTATGTTTCTCTTTCCT 59.756 40.000 3.32 0.00 0.00 3.36
5163 10179 5.470368 GTGGCCTTTTATGTTTCTCTTTCC 58.530 41.667 3.32 0.00 0.00 3.13
5164 10180 5.010617 TGGTGGCCTTTTATGTTTCTCTTTC 59.989 40.000 3.32 0.00 0.00 2.62
5165 10181 4.898861 TGGTGGCCTTTTATGTTTCTCTTT 59.101 37.500 3.32 0.00 0.00 2.52
5166 10182 4.479158 TGGTGGCCTTTTATGTTTCTCTT 58.521 39.130 3.32 0.00 0.00 2.85
5167 10183 4.112634 TGGTGGCCTTTTATGTTTCTCT 57.887 40.909 3.32 0.00 0.00 3.10
5168 10184 4.381932 CCATGGTGGCCTTTTATGTTTCTC 60.382 45.833 3.32 0.00 0.00 2.87
5169 10185 3.515104 CCATGGTGGCCTTTTATGTTTCT 59.485 43.478 3.32 0.00 0.00 2.52
5170 10186 3.369366 CCCATGGTGGCCTTTTATGTTTC 60.369 47.826 11.73 0.00 35.79 2.78
5171 10187 2.571202 CCCATGGTGGCCTTTTATGTTT 59.429 45.455 11.73 0.00 35.79 2.83
5172 10188 2.187100 CCCATGGTGGCCTTTTATGTT 58.813 47.619 11.73 0.00 35.79 2.71
5173 10189 1.864669 CCCATGGTGGCCTTTTATGT 58.135 50.000 11.73 0.00 35.79 2.29
5174 10190 0.465287 GCCCATGGTGGCCTTTTATG 59.535 55.000 11.73 3.61 46.11 1.90
5175 10191 2.914908 GCCCATGGTGGCCTTTTAT 58.085 52.632 11.73 0.00 46.11 1.40
5176 10192 4.451544 GCCCATGGTGGCCTTTTA 57.548 55.556 11.73 0.00 46.11 1.52
5183 10199 1.001020 TGTAGCTTGCCCATGGTGG 60.001 57.895 11.73 0.00 37.25 4.61
5184 10200 0.035152 TCTGTAGCTTGCCCATGGTG 60.035 55.000 11.73 3.26 0.00 4.17
5185 10201 0.698238 TTCTGTAGCTTGCCCATGGT 59.302 50.000 11.73 0.00 0.00 3.55
5186 10202 2.062971 ATTCTGTAGCTTGCCCATGG 57.937 50.000 4.14 4.14 0.00 3.66
5187 10203 3.144506 CCTATTCTGTAGCTTGCCCATG 58.855 50.000 0.00 0.00 0.00 3.66
5188 10204 2.487986 GCCTATTCTGTAGCTTGCCCAT 60.488 50.000 0.00 0.00 0.00 4.00
5189 10205 1.134098 GCCTATTCTGTAGCTTGCCCA 60.134 52.381 0.00 0.00 0.00 5.36
5190 10206 1.598882 GCCTATTCTGTAGCTTGCCC 58.401 55.000 0.00 0.00 0.00 5.36
5191 10207 1.202533 TCGCCTATTCTGTAGCTTGCC 60.203 52.381 0.00 0.00 0.00 4.52
5192 10208 2.131183 CTCGCCTATTCTGTAGCTTGC 58.869 52.381 0.00 0.00 0.00 4.01
5193 10209 2.131183 GCTCGCCTATTCTGTAGCTTG 58.869 52.381 0.00 0.00 0.00 4.01
5194 10210 1.269309 CGCTCGCCTATTCTGTAGCTT 60.269 52.381 0.00 0.00 0.00 3.74
5195 10211 0.312416 CGCTCGCCTATTCTGTAGCT 59.688 55.000 0.00 0.00 0.00 3.32
5196 10212 0.311165 TCGCTCGCCTATTCTGTAGC 59.689 55.000 0.00 0.00 0.00 3.58
5197 10213 1.335142 GGTCGCTCGCCTATTCTGTAG 60.335 57.143 0.00 0.00 0.00 2.74
5198 10214 0.666913 GGTCGCTCGCCTATTCTGTA 59.333 55.000 0.00 0.00 0.00 2.74
5199 10215 1.320344 TGGTCGCTCGCCTATTCTGT 61.320 55.000 4.86 0.00 0.00 3.41
5200 10216 0.596083 CTGGTCGCTCGCCTATTCTG 60.596 60.000 4.86 0.00 0.00 3.02
5201 10217 0.752009 TCTGGTCGCTCGCCTATTCT 60.752 55.000 4.86 0.00 0.00 2.40
5202 10218 0.318275 CTCTGGTCGCTCGCCTATTC 60.318 60.000 4.86 0.00 0.00 1.75
5203 10219 0.752009 TCTCTGGTCGCTCGCCTATT 60.752 55.000 4.86 0.00 0.00 1.73
5204 10220 1.152943 TCTCTGGTCGCTCGCCTAT 60.153 57.895 4.86 0.00 0.00 2.57
5205 10221 1.820056 CTCTCTGGTCGCTCGCCTA 60.820 63.158 4.86 0.00 0.00 3.93
5206 10222 3.137459 CTCTCTGGTCGCTCGCCT 61.137 66.667 4.86 0.00 0.00 5.52
5207 10223 4.863925 GCTCTCTGGTCGCTCGCC 62.864 72.222 0.00 0.00 0.00 5.54
5208 10224 4.863925 GGCTCTCTGGTCGCTCGC 62.864 72.222 0.00 0.00 0.00 5.03
5209 10225 4.544689 CGGCTCTCTGGTCGCTCG 62.545 72.222 0.00 0.00 0.00 5.03
5210 10226 3.134792 TCGGCTCTCTGGTCGCTC 61.135 66.667 0.00 0.00 0.00 5.03
5211 10227 3.444805 GTCGGCTCTCTGGTCGCT 61.445 66.667 0.00 0.00 0.00 4.93
5212 10228 3.749064 TGTCGGCTCTCTGGTCGC 61.749 66.667 0.00 0.00 0.00 5.19
5213 10229 2.179517 GTGTCGGCTCTCTGGTCG 59.820 66.667 0.00 0.00 0.00 4.79
5214 10230 2.179517 CGTGTCGGCTCTCTGGTC 59.820 66.667 0.00 0.00 0.00 4.02
5215 10231 4.057428 GCGTGTCGGCTCTCTGGT 62.057 66.667 0.00 0.00 0.00 4.00
5226 10242 4.980805 TGGTGGCTTCCGCGTGTC 62.981 66.667 4.92 0.00 34.37 3.67
5227 10243 4.988598 CTGGTGGCTTCCGCGTGT 62.989 66.667 4.92 0.00 34.37 4.49
5228 10244 4.680237 TCTGGTGGCTTCCGCGTG 62.680 66.667 4.92 0.00 34.37 5.34
5229 10245 4.379243 CTCTGGTGGCTTCCGCGT 62.379 66.667 4.92 0.00 34.37 6.01
5232 10248 4.379243 ACGCTCTGGTGGCTTCCG 62.379 66.667 0.00 0.00 0.00 4.30
5233 10249 2.435059 GACGCTCTGGTGGCTTCC 60.435 66.667 0.00 0.00 0.00 3.46
5234 10250 2.435059 GGACGCTCTGGTGGCTTC 60.435 66.667 0.00 0.00 0.00 3.86
5235 10251 3.241530 TGGACGCTCTGGTGGCTT 61.242 61.111 0.00 0.00 0.00 4.35
5236 10252 3.699894 CTGGACGCTCTGGTGGCT 61.700 66.667 0.00 0.00 0.00 4.75
5237 10253 4.767255 CCTGGACGCTCTGGTGGC 62.767 72.222 0.00 0.00 0.00 5.01
5238 10254 1.541310 TTACCTGGACGCTCTGGTGG 61.541 60.000 14.45 0.00 38.98 4.61
5239 10255 0.320374 TTTACCTGGACGCTCTGGTG 59.680 55.000 14.45 0.00 38.98 4.17
5240 10256 0.608640 CTTTACCTGGACGCTCTGGT 59.391 55.000 0.00 10.90 41.05 4.00
5241 10257 0.741221 GCTTTACCTGGACGCTCTGG 60.741 60.000 0.00 1.02 0.00 3.86
5242 10258 0.247736 AGCTTTACCTGGACGCTCTG 59.752 55.000 0.00 0.00 0.00 3.35
5243 10259 0.247736 CAGCTTTACCTGGACGCTCT 59.752 55.000 0.00 0.00 0.00 4.09
5244 10260 0.246635 TCAGCTTTACCTGGACGCTC 59.753 55.000 0.00 0.00 33.64 5.03
5245 10261 0.685097 TTCAGCTTTACCTGGACGCT 59.315 50.000 0.00 0.00 33.64 5.07
5246 10262 1.079503 CTTCAGCTTTACCTGGACGC 58.920 55.000 0.00 0.00 33.64 5.19
5247 10263 1.079503 GCTTCAGCTTTACCTGGACG 58.920 55.000 0.00 0.00 38.21 4.79
5248 10264 1.454201 GGCTTCAGCTTTACCTGGAC 58.546 55.000 0.00 0.00 41.70 4.02
5249 10265 0.036388 CGGCTTCAGCTTTACCTGGA 60.036 55.000 0.00 0.00 41.70 3.86
5250 10266 1.026718 CCGGCTTCAGCTTTACCTGG 61.027 60.000 0.00 0.00 41.70 4.45
5251 10267 0.321653 ACCGGCTTCAGCTTTACCTG 60.322 55.000 0.00 0.00 41.70 4.00
5252 10268 0.036294 GACCGGCTTCAGCTTTACCT 60.036 55.000 0.00 0.00 41.70 3.08
5253 10269 0.321298 TGACCGGCTTCAGCTTTACC 60.321 55.000 0.00 0.00 41.70 2.85
5254 10270 0.796927 GTGACCGGCTTCAGCTTTAC 59.203 55.000 0.00 0.00 41.70 2.01
5255 10271 0.669318 CGTGACCGGCTTCAGCTTTA 60.669 55.000 0.00 0.00 41.70 1.85
5256 10272 1.961277 CGTGACCGGCTTCAGCTTT 60.961 57.895 0.00 0.00 41.70 3.51
5257 10273 2.357517 CGTGACCGGCTTCAGCTT 60.358 61.111 0.00 0.00 41.70 3.74
5258 10274 3.303135 TCGTGACCGGCTTCAGCT 61.303 61.111 0.00 0.00 41.70 4.24
5259 10275 3.112709 GTCGTGACCGGCTTCAGC 61.113 66.667 0.00 0.00 35.32 4.26
5260 10276 2.432628 GGTCGTGACCGGCTTCAG 60.433 66.667 0.00 0.00 42.29 3.02
5269 10285 1.668101 CTAGGCTGAGGGGTCGTGAC 61.668 65.000 0.00 0.00 0.00 3.67
5270 10286 1.379977 CTAGGCTGAGGGGTCGTGA 60.380 63.158 0.00 0.00 0.00 4.35
5271 10287 3.082579 GCTAGGCTGAGGGGTCGTG 62.083 68.421 0.00 0.00 0.00 4.35
5272 10288 2.760385 GCTAGGCTGAGGGGTCGT 60.760 66.667 0.00 0.00 0.00 4.34
5273 10289 3.905678 CGCTAGGCTGAGGGGTCG 61.906 72.222 0.00 0.00 0.00 4.79
5274 10290 2.442272 TCGCTAGGCTGAGGGGTC 60.442 66.667 0.00 0.00 0.00 4.46
5275 10291 2.443016 CTCGCTAGGCTGAGGGGT 60.443 66.667 0.00 0.00 0.00 4.95
5276 10292 3.922640 GCTCGCTAGGCTGAGGGG 61.923 72.222 0.00 0.00 32.82 4.79
5277 10293 4.277593 CGCTCGCTAGGCTGAGGG 62.278 72.222 0.00 0.00 36.54 4.30
5278 10294 4.277593 CCGCTCGCTAGGCTGAGG 62.278 72.222 0.00 0.00 32.82 3.86
5279 10295 2.560119 ATCCGCTCGCTAGGCTGAG 61.560 63.158 0.00 0.00 34.33 3.35
5280 10296 2.519541 ATCCGCTCGCTAGGCTGA 60.520 61.111 0.00 0.00 0.00 4.26
5281 10297 2.355599 CATCCGCTCGCTAGGCTG 60.356 66.667 0.00 0.00 0.00 4.85
5282 10298 4.292178 GCATCCGCTCGCTAGGCT 62.292 66.667 0.00 0.00 34.30 4.58
5292 10308 2.044832 CTTGCAGCACTAGCATCCGC 62.045 60.000 0.00 0.00 45.49 5.54
5293 10309 0.460811 TCTTGCAGCACTAGCATCCG 60.461 55.000 0.00 0.00 45.49 4.18
5294 10310 1.742761 TTCTTGCAGCACTAGCATCC 58.257 50.000 0.00 0.00 45.49 3.51
5295 10311 2.477525 GCTTTCTTGCAGCACTAGCATC 60.478 50.000 0.00 0.00 45.49 3.91
5296 10312 1.471684 GCTTTCTTGCAGCACTAGCAT 59.528 47.619 0.00 0.00 45.49 3.79
5297 10313 0.877071 GCTTTCTTGCAGCACTAGCA 59.123 50.000 0.00 0.00 45.49 3.49
5298 10314 0.169894 GGCTTTCTTGCAGCACTAGC 59.830 55.000 0.00 1.45 39.21 3.42
5299 10315 1.467734 CTGGCTTTCTTGCAGCACTAG 59.532 52.381 0.00 0.00 39.21 2.57
5300 10316 1.072173 TCTGGCTTTCTTGCAGCACTA 59.928 47.619 0.00 0.00 39.21 2.74
5301 10317 0.179009 TCTGGCTTTCTTGCAGCACT 60.179 50.000 0.00 0.00 39.21 4.40
5302 10318 0.670162 TTCTGGCTTTCTTGCAGCAC 59.330 50.000 0.00 0.00 39.21 4.40
5303 10319 1.401761 TTTCTGGCTTTCTTGCAGCA 58.598 45.000 0.00 0.00 39.21 4.41
5304 10320 2.738013 ATTTCTGGCTTTCTTGCAGC 57.262 45.000 0.00 0.00 36.45 5.25
5305 10321 4.624015 TCAAATTTCTGGCTTTCTTGCAG 58.376 39.130 0.00 0.00 34.04 4.41
5306 10322 4.669206 TCAAATTTCTGGCTTTCTTGCA 57.331 36.364 0.00 0.00 34.04 4.08
5307 10323 5.291971 TCTTCAAATTTCTGGCTTTCTTGC 58.708 37.500 0.00 0.00 0.00 4.01
5308 10324 6.074676 CGTTCTTCAAATTTCTGGCTTTCTTG 60.075 38.462 0.00 0.00 0.00 3.02
5309 10325 5.979517 CGTTCTTCAAATTTCTGGCTTTCTT 59.020 36.000 0.00 0.00 0.00 2.52
5310 10326 5.299279 TCGTTCTTCAAATTTCTGGCTTTCT 59.701 36.000 0.00 0.00 0.00 2.52
5311 10327 5.519722 TCGTTCTTCAAATTTCTGGCTTTC 58.480 37.500 0.00 0.00 0.00 2.62
5312 10328 5.514274 TCGTTCTTCAAATTTCTGGCTTT 57.486 34.783 0.00 0.00 0.00 3.51
5313 10329 5.514274 TTCGTTCTTCAAATTTCTGGCTT 57.486 34.783 0.00 0.00 0.00 4.35
5314 10330 5.241506 TGATTCGTTCTTCAAATTTCTGGCT 59.758 36.000 0.00 0.00 0.00 4.75
5315 10331 5.460646 TGATTCGTTCTTCAAATTTCTGGC 58.539 37.500 0.00 0.00 0.00 4.85
5316 10332 6.902341 TCTGATTCGTTCTTCAAATTTCTGG 58.098 36.000 0.00 0.00 0.00 3.86
5317 10333 7.060403 GCTTCTGATTCGTTCTTCAAATTTCTG 59.940 37.037 0.00 0.00 0.00 3.02
5318 10334 7.080724 GCTTCTGATTCGTTCTTCAAATTTCT 58.919 34.615 0.00 0.00 0.00 2.52
5319 10335 6.857964 TGCTTCTGATTCGTTCTTCAAATTTC 59.142 34.615 0.00 0.00 0.00 2.17
5320 10336 6.638468 GTGCTTCTGATTCGTTCTTCAAATTT 59.362 34.615 0.00 0.00 0.00 1.82
5321 10337 6.145535 GTGCTTCTGATTCGTTCTTCAAATT 58.854 36.000 0.00 0.00 0.00 1.82
5322 10338 5.615544 CGTGCTTCTGATTCGTTCTTCAAAT 60.616 40.000 0.00 0.00 0.00 2.32
5323 10339 4.318760 CGTGCTTCTGATTCGTTCTTCAAA 60.319 41.667 0.00 0.00 0.00 2.69
5324 10340 3.184379 CGTGCTTCTGATTCGTTCTTCAA 59.816 43.478 0.00 0.00 0.00 2.69
5325 10341 2.731451 CGTGCTTCTGATTCGTTCTTCA 59.269 45.455 0.00 0.00 0.00 3.02
5326 10342 2.731976 ACGTGCTTCTGATTCGTTCTTC 59.268 45.455 0.00 0.00 0.00 2.87
5327 10343 2.731976 GACGTGCTTCTGATTCGTTCTT 59.268 45.455 0.00 0.00 34.93 2.52
5328 10344 2.329379 GACGTGCTTCTGATTCGTTCT 58.671 47.619 0.00 0.00 34.93 3.01
5329 10345 1.057847 CGACGTGCTTCTGATTCGTTC 59.942 52.381 0.00 0.00 34.93 3.95
5330 10346 1.060713 CGACGTGCTTCTGATTCGTT 58.939 50.000 0.00 0.00 34.93 3.85
5331 10347 1.344942 GCGACGTGCTTCTGATTCGT 61.345 55.000 0.00 0.00 41.73 3.85
5332 10348 1.341802 GCGACGTGCTTCTGATTCG 59.658 57.895 0.00 0.00 41.73 3.34
5333 10349 1.341802 CGCGACGTGCTTCTGATTC 59.658 57.895 0.00 0.00 43.27 2.52
5334 10350 2.094659 CCGCGACGTGCTTCTGATT 61.095 57.895 8.23 0.00 43.27 2.57
5335 10351 2.507102 CCGCGACGTGCTTCTGAT 60.507 61.111 8.23 0.00 43.27 2.90
5336 10352 4.717629 CCCGCGACGTGCTTCTGA 62.718 66.667 8.23 0.00 43.27 3.27
5337 10353 4.717629 TCCCGCGACGTGCTTCTG 62.718 66.667 8.23 0.00 43.27 3.02
5338 10354 3.986006 TTCCCGCGACGTGCTTCT 61.986 61.111 8.23 0.00 43.27 2.85
5339 10355 3.774702 GTTCCCGCGACGTGCTTC 61.775 66.667 8.23 0.00 43.27 3.86
5340 10356 4.595538 TGTTCCCGCGACGTGCTT 62.596 61.111 8.23 0.00 43.27 3.91


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.