Multiple sequence alignment - TraesCS5B01G537000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G537000 chr5B 100.000 4252 0 0 662 4913 693006372 693002121 0.000000e+00 7853.0
1 TraesCS5B01G537000 chr5B 100.000 386 0 0 1 386 693007033 693006648 0.000000e+00 713.0
2 TraesCS5B01G537000 chr5B 97.368 38 1 0 60 97 661394015 661394052 1.140000e-06 65.8
3 TraesCS5B01G537000 chr5B 100.000 28 0 0 4550 4577 565770349 565770376 9.000000e-03 52.8
4 TraesCS5B01G537000 chr4A 93.812 3717 149 34 693 4378 612061887 612065553 0.000000e+00 5515.0
5 TraesCS5B01G537000 chr4A 78.287 327 29 16 81 386 612061358 612061663 6.540000e-39 172.0
6 TraesCS5B01G537000 chr4A 87.671 73 6 3 4580 4652 647845632 647845701 1.130000e-11 82.4
7 TraesCS5B01G537000 chr5D 93.579 3504 151 28 664 4137 558951824 558955283 0.000000e+00 5156.0
8 TraesCS5B01G537000 chr5D 80.531 339 31 13 69 386 558951411 558951735 1.380000e-55 228.0
9 TraesCS5B01G537000 chr5D 83.333 90 12 3 4580 4668 135658019 135657932 4.080000e-11 80.5
10 TraesCS5B01G537000 chr6B 94.366 71 4 0 1258 1328 8528949 8529019 5.200000e-20 110.0
11 TraesCS5B01G537000 chr6B 86.486 74 8 2 4580 4653 195807111 195807040 4.080000e-11 80.5
12 TraesCS5B01G537000 chr6A 93.333 60 4 0 4580 4639 542057109 542057168 6.770000e-14 89.8
13 TraesCS5B01G537000 chr6A 85.897 78 7 4 4580 4655 613616649 613616574 4.080000e-11 80.5
14 TraesCS5B01G537000 chr3D 90.909 66 5 1 4573 4637 96684580 96684515 2.440000e-13 87.9
15 TraesCS5B01G537000 chr5A 90.769 65 4 2 4580 4644 656477365 656477427 8.760000e-13 86.1
16 TraesCS5B01G537000 chr2A 89.552 67 7 0 4580 4646 205919831 205919897 8.760000e-13 86.1
17 TraesCS5B01G537000 chr7B 83.908 87 10 3 4580 4664 274319114 274319198 4.080000e-11 80.5
18 TraesCS5B01G537000 chr1A 85.915 71 9 1 4743 4812 35149312 35149242 1.900000e-09 75.0
19 TraesCS5B01G537000 chr1B 83.099 71 11 1 4743 4812 55436970 55436900 4.110000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G537000 chr5B 693002121 693007033 4912 True 4283.0 7853 100.0000 1 4913 2 chr5B.!!$R1 4912
1 TraesCS5B01G537000 chr4A 612061358 612065553 4195 False 2843.5 5515 86.0495 81 4378 2 chr4A.!!$F2 4297
2 TraesCS5B01G537000 chr5D 558951411 558955283 3872 False 2692.0 5156 87.0550 69 4137 2 chr5D.!!$F1 4068

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
971 1126 0.036294 ACTTGCTAGGTTTCGCCTCC 60.036 55.0 0.0 0.0 46.96 4.30 F
973 1128 0.036388 TTGCTAGGTTTCGCCTCCTG 60.036 55.0 0.0 0.0 46.96 3.86 F
2368 2535 0.169672 TTCTTTAGCGAGGACCGACG 59.830 55.0 9.2 9.2 41.76 5.12 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2070 2237 0.385390 CAAGCGCCTTTTTGACCTGT 59.615 50.0 2.29 0.0 0.00 4.00 R
2793 2960 0.988063 GCCTCCTGTTCTCTTCCCTT 59.012 55.0 0.00 0.0 0.00 3.95 R
3984 4151 1.604604 ACAACATTCCCGTGAACCAG 58.395 50.0 0.00 0.0 32.13 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.561143 ACAATTTGACCAACCTACAGCA 58.439 40.909 2.79 0.00 0.00 4.41
22 23 3.569701 ACAATTTGACCAACCTACAGCAG 59.430 43.478 2.79 0.00 0.00 4.24
23 24 1.604604 TTTGACCAACCTACAGCAGC 58.395 50.000 0.00 0.00 0.00 5.25
24 25 0.472044 TTGACCAACCTACAGCAGCA 59.528 50.000 0.00 0.00 0.00 4.41
25 26 0.472044 TGACCAACCTACAGCAGCAA 59.528 50.000 0.00 0.00 0.00 3.91
26 27 1.073763 TGACCAACCTACAGCAGCAAT 59.926 47.619 0.00 0.00 0.00 3.56
27 28 2.162681 GACCAACCTACAGCAGCAATT 58.837 47.619 0.00 0.00 0.00 2.32
28 29 2.162408 GACCAACCTACAGCAGCAATTC 59.838 50.000 0.00 0.00 0.00 2.17
29 30 2.224867 ACCAACCTACAGCAGCAATTCT 60.225 45.455 0.00 0.00 0.00 2.40
30 31 2.421424 CCAACCTACAGCAGCAATTCTC 59.579 50.000 0.00 0.00 0.00 2.87
31 32 3.076621 CAACCTACAGCAGCAATTCTCA 58.923 45.455 0.00 0.00 0.00 3.27
32 33 2.983229 ACCTACAGCAGCAATTCTCAG 58.017 47.619 0.00 0.00 0.00 3.35
33 34 2.304180 ACCTACAGCAGCAATTCTCAGT 59.696 45.455 0.00 0.00 0.00 3.41
34 35 3.244700 ACCTACAGCAGCAATTCTCAGTT 60.245 43.478 0.00 0.00 0.00 3.16
35 36 3.373439 CCTACAGCAGCAATTCTCAGTTC 59.627 47.826 0.00 0.00 0.00 3.01
36 37 2.854963 ACAGCAGCAATTCTCAGTTCA 58.145 42.857 0.00 0.00 0.00 3.18
37 38 2.551459 ACAGCAGCAATTCTCAGTTCAC 59.449 45.455 0.00 0.00 0.00 3.18
38 39 2.551032 CAGCAGCAATTCTCAGTTCACA 59.449 45.455 0.00 0.00 0.00 3.58
39 40 2.812591 AGCAGCAATTCTCAGTTCACAG 59.187 45.455 0.00 0.00 0.00 3.66
40 41 2.810274 GCAGCAATTCTCAGTTCACAGA 59.190 45.455 0.00 0.00 0.00 3.41
41 42 3.364764 GCAGCAATTCTCAGTTCACAGAC 60.365 47.826 0.00 0.00 0.00 3.51
42 43 3.811497 CAGCAATTCTCAGTTCACAGACA 59.189 43.478 0.00 0.00 0.00 3.41
43 44 4.274214 CAGCAATTCTCAGTTCACAGACAA 59.726 41.667 0.00 0.00 0.00 3.18
44 45 4.274459 AGCAATTCTCAGTTCACAGACAAC 59.726 41.667 0.00 0.00 0.00 3.32
45 46 4.035558 GCAATTCTCAGTTCACAGACAACA 59.964 41.667 0.00 0.00 0.00 3.33
46 47 5.745514 CAATTCTCAGTTCACAGACAACAG 58.254 41.667 0.00 0.00 0.00 3.16
47 48 4.736126 TTCTCAGTTCACAGACAACAGA 57.264 40.909 0.00 0.00 0.00 3.41
48 49 4.313277 TCTCAGTTCACAGACAACAGAG 57.687 45.455 0.00 0.00 38.24 3.35
49 50 3.068732 TCTCAGTTCACAGACAACAGAGG 59.931 47.826 5.47 0.00 37.75 3.69
50 51 2.766263 TCAGTTCACAGACAACAGAGGT 59.234 45.455 0.00 0.00 0.00 3.85
51 52 3.126831 CAGTTCACAGACAACAGAGGTC 58.873 50.000 0.00 0.00 35.50 3.85
52 53 2.103263 AGTTCACAGACAACAGAGGTCC 59.897 50.000 0.00 0.00 35.89 4.46
53 54 1.788229 TCACAGACAACAGAGGTCCA 58.212 50.000 0.00 0.00 35.89 4.02
54 55 1.412710 TCACAGACAACAGAGGTCCAC 59.587 52.381 0.00 0.00 35.89 4.02
55 56 1.138859 CACAGACAACAGAGGTCCACA 59.861 52.381 0.00 0.00 35.89 4.17
56 57 1.414181 ACAGACAACAGAGGTCCACAG 59.586 52.381 0.00 0.00 35.89 3.66
57 58 1.051812 AGACAACAGAGGTCCACAGG 58.948 55.000 0.00 0.00 35.89 4.00
58 59 0.759346 GACAACAGAGGTCCACAGGT 59.241 55.000 0.00 0.00 0.00 4.00
59 60 0.469917 ACAACAGAGGTCCACAGGTG 59.530 55.000 0.00 0.00 0.00 4.00
60 61 0.758734 CAACAGAGGTCCACAGGTGA 59.241 55.000 0.00 0.00 0.00 4.02
61 62 1.349026 CAACAGAGGTCCACAGGTGAT 59.651 52.381 0.00 0.00 0.00 3.06
62 63 0.979665 ACAGAGGTCCACAGGTGATG 59.020 55.000 0.00 0.00 0.00 3.07
63 64 1.269958 CAGAGGTCCACAGGTGATGA 58.730 55.000 0.00 0.00 0.00 2.92
64 65 1.625315 CAGAGGTCCACAGGTGATGAA 59.375 52.381 0.00 0.00 0.00 2.57
65 66 2.238144 CAGAGGTCCACAGGTGATGAAT 59.762 50.000 0.00 0.00 0.00 2.57
66 67 2.503356 AGAGGTCCACAGGTGATGAATC 59.497 50.000 0.00 0.00 0.00 2.52
67 68 2.237143 GAGGTCCACAGGTGATGAATCA 59.763 50.000 0.00 0.00 0.00 2.57
78 79 7.648112 CACAGGTGATGAATCAATCAATCAATC 59.352 37.037 0.00 0.00 42.54 2.67
79 80 7.340999 ACAGGTGATGAATCAATCAATCAATCA 59.659 33.333 0.00 0.00 42.54 2.57
91 92 6.879276 ATCAATCAATCAGCCAGATAACAG 57.121 37.500 0.00 0.00 35.39 3.16
122 123 2.345760 GCCCACTGGTGCCAATCAG 61.346 63.158 0.00 0.00 37.07 2.90
132 133 5.415701 ACTGGTGCCAATCAGTAATTGTAAG 59.584 40.000 0.76 0.00 42.80 2.34
133 134 5.321102 TGGTGCCAATCAGTAATTGTAAGT 58.679 37.500 0.00 0.00 42.80 2.24
134 135 5.772672 TGGTGCCAATCAGTAATTGTAAGTT 59.227 36.000 0.00 0.00 42.80 2.66
135 136 6.266558 TGGTGCCAATCAGTAATTGTAAGTTT 59.733 34.615 0.00 0.00 42.80 2.66
136 137 6.586082 GGTGCCAATCAGTAATTGTAAGTTTG 59.414 38.462 0.00 0.00 42.80 2.93
137 138 7.145323 GTGCCAATCAGTAATTGTAAGTTTGT 58.855 34.615 0.00 0.00 42.80 2.83
139 140 8.851145 TGCCAATCAGTAATTGTAAGTTTGTAA 58.149 29.630 0.00 0.00 42.80 2.41
144 145 8.967664 TCAGTAATTGTAAGTTTGTAACACCT 57.032 30.769 0.00 0.00 0.00 4.00
148 149 9.603298 GTAATTGTAAGTTTGTAACACCTAAGC 57.397 33.333 0.00 0.00 0.00 3.09
149 150 5.910637 TGTAAGTTTGTAACACCTAAGCG 57.089 39.130 0.00 0.00 0.00 4.68
150 151 3.891056 AAGTTTGTAACACCTAAGCGC 57.109 42.857 0.00 0.00 0.00 5.92
151 152 2.148768 AGTTTGTAACACCTAAGCGCC 58.851 47.619 2.29 0.00 0.00 6.53
152 153 1.198408 GTTTGTAACACCTAAGCGCCC 59.802 52.381 2.29 0.00 0.00 6.13
159 160 1.001248 ACCTAAGCGCCCACTAGGA 59.999 57.895 22.33 0.00 38.24 2.94
162 163 0.671251 CTAAGCGCCCACTAGGAGAG 59.329 60.000 2.29 0.00 37.72 3.20
163 164 1.392710 TAAGCGCCCACTAGGAGAGC 61.393 60.000 2.29 0.00 37.72 4.09
198 208 0.586502 GAATCGCGTCACCAAATCGC 60.587 55.000 5.77 0.00 45.28 4.58
211 221 0.460987 AAATCGCCTCAGCTCGAAGG 60.461 55.000 0.00 0.88 38.28 3.46
212 222 1.323271 AATCGCCTCAGCTCGAAGGA 61.323 55.000 5.02 0.00 38.28 3.36
215 225 1.807573 GCCTCAGCTCGAAGGAACG 60.808 63.158 5.02 0.00 35.50 3.95
243 259 0.861837 CGCGGATCAAATCTAGCCAC 59.138 55.000 0.00 0.00 32.33 5.01
257 273 4.096003 CCACTGCTACACCGGGGG 62.096 72.222 9.50 0.00 0.00 5.40
688 720 4.785453 CGGGCCTGGGCTCAACTC 62.785 72.222 20.47 0.88 42.84 3.01
689 721 4.785453 GGGCCTGGGCTCAACTCG 62.785 72.222 20.47 0.00 42.14 4.18
692 724 4.785453 CCTGGGCTCAACTCGGCC 62.785 72.222 0.00 0.00 46.89 6.13
716 844 4.284550 GGGCTGTGAACTGGGCCA 62.285 66.667 5.85 5.85 45.68 5.36
735 863 1.139947 GTAGCAGGCCGAGTCTGAC 59.860 63.158 9.33 0.00 37.47 3.51
737 865 1.595993 TAGCAGGCCGAGTCTGACAC 61.596 60.000 10.88 2.58 37.47 3.67
759 887 2.281070 CCCAGCACGACAAGCAGT 60.281 61.111 0.00 0.00 0.00 4.40
780 919 1.078637 GTTCCGGACCCTACTTGGC 60.079 63.158 1.83 0.00 0.00 4.52
881 1024 4.779733 ACCGCCGGTGAGATCCCT 62.780 66.667 18.79 0.00 32.98 4.20
891 1034 2.447379 AGATCCCTGCGCCCTCAT 60.447 61.111 4.18 0.00 0.00 2.90
899 1044 3.606662 GCGCCCTCATCCGCTAGA 61.607 66.667 0.00 0.00 46.14 2.43
911 1056 4.566759 TCATCCGCTAGAAACTTCAAATCG 59.433 41.667 0.00 0.00 0.00 3.34
951 1106 4.388499 CCTGACCCGGTTCCGTGG 62.388 72.222 10.36 12.50 0.00 4.94
952 1107 3.307906 CTGACCCGGTTCCGTGGA 61.308 66.667 19.77 0.00 0.00 4.02
958 1113 2.030562 CGGTTCCGTGGACTTGCT 59.969 61.111 2.82 0.00 0.00 3.91
964 1119 1.053424 TCCGTGGACTTGCTAGGTTT 58.947 50.000 0.00 0.00 0.00 3.27
971 1126 0.036294 ACTTGCTAGGTTTCGCCTCC 60.036 55.000 0.00 0.00 46.96 4.30
972 1127 0.250513 CTTGCTAGGTTTCGCCTCCT 59.749 55.000 0.00 0.00 46.96 3.69
973 1128 0.036388 TTGCTAGGTTTCGCCTCCTG 60.036 55.000 0.00 0.00 46.96 3.86
974 1129 1.192146 TGCTAGGTTTCGCCTCCTGT 61.192 55.000 0.00 0.00 46.96 4.00
975 1130 0.460459 GCTAGGTTTCGCCTCCTGTC 60.460 60.000 0.00 0.00 46.96 3.51
1398 1565 3.384532 GGCGAGTACACCCCCGAA 61.385 66.667 0.00 0.00 0.00 4.30
1564 1731 2.978018 GCCACTGCCGGTAAAGCAC 61.978 63.158 1.90 0.00 36.01 4.40
1569 1736 1.302993 TGCCGGTAAAGCACTTCCC 60.303 57.895 1.90 0.00 34.69 3.97
1666 1833 0.721718 GCCGAACGAGGTTGAAGATG 59.278 55.000 0.00 0.00 0.00 2.90
1679 1846 6.719301 AGGTTGAAGATGATGATTCTGAAGT 58.281 36.000 0.00 0.00 0.00 3.01
1698 1865 2.746359 GAGGCGGAGGATGATGGG 59.254 66.667 0.00 0.00 0.00 4.00
1719 1886 0.543749 AAGATGAGGAGAAAGGGCCG 59.456 55.000 0.00 0.00 0.00 6.13
1929 2096 0.247736 AGAAGACGAGTGATGGCCAC 59.752 55.000 8.16 2.36 46.03 5.01
2070 2237 0.772124 AAAGGAAGTGGGAGGAGGCA 60.772 55.000 0.00 0.00 0.00 4.75
2175 2342 4.478371 CAGCCGCAGCCATCTGGA 62.478 66.667 0.00 0.00 40.65 3.86
2184 2351 0.188587 AGCCATCTGGATACTCGGGA 59.811 55.000 0.00 0.00 37.39 5.14
2368 2535 0.169672 TTCTTTAGCGAGGACCGACG 59.830 55.000 9.20 9.20 41.76 5.12
2445 2612 5.106908 GGATGCAGAGAAGAAGTTTGTGTAC 60.107 44.000 0.00 0.00 0.00 2.90
2574 2741 1.270518 GCACTGGCTGTTTCAGAGAGA 60.271 52.381 0.66 0.00 36.22 3.10
2601 2768 1.267732 GCCGACTTTGCTGATGAATCG 60.268 52.381 0.00 0.00 0.00 3.34
2604 2771 1.064654 GACTTTGCTGATGAATCGGGC 59.935 52.381 1.45 2.00 33.75 6.13
2610 2777 1.143305 CTGATGAATCGGGCGTGATC 58.857 55.000 0.00 0.00 0.00 2.92
2655 2822 4.640771 ATCTGTTCTTAGCAAAGGACCA 57.359 40.909 0.00 0.00 40.12 4.02
2667 2834 2.481289 AAGGACCAAGCTCAGCTAAC 57.519 50.000 0.00 0.00 38.25 2.34
2793 2960 3.318275 AGAAGCGTATGGATCTTAAGCGA 59.682 43.478 0.00 0.00 0.00 4.93
2856 3023 3.558505 CAAAAGATTGTCTTCTGCACGG 58.441 45.455 0.00 0.00 35.27 4.94
3207 3374 5.128919 GGTTATGGAGTGCAAGATGAAGAT 58.871 41.667 0.00 0.00 0.00 2.40
3221 3388 4.586841 AGATGAAGATAGTGCTGACCCTAC 59.413 45.833 0.00 0.00 0.00 3.18
3255 3422 5.012046 TCTGAACCTCATTCAAGTTCTAGCA 59.988 40.000 0.00 0.00 46.80 3.49
3264 3431 6.205464 TCATTCAAGTTCTAGCAGAAAAGGTG 59.795 38.462 0.96 0.00 35.75 4.00
3310 3477 2.113860 TAAGCACTGCTGGGACATTC 57.886 50.000 3.73 0.00 39.62 2.67
3318 3485 0.035630 GCTGGGACATTCTGAGCACT 60.036 55.000 0.00 0.00 38.20 4.40
3330 3497 3.461061 TCTGAGCACTCAAAGAACACAG 58.539 45.455 1.42 0.00 39.39 3.66
3373 3540 2.285083 TGGTGATTAACTATGTGCCGC 58.715 47.619 0.00 0.00 0.00 6.53
3385 3552 1.442688 GTGCCGCTAACAAGCAAGC 60.443 57.895 0.00 0.79 38.45 4.01
3456 3623 2.728397 TGACGTGTCAGTACCAGCT 58.272 52.632 0.00 0.00 34.14 4.24
3479 3646 1.341383 GGGATCAATGCTGACAAGGGT 60.341 52.381 0.00 0.00 33.30 4.34
3572 3739 1.341209 GTGGAAAAAGGTCCTTGCAGG 59.659 52.381 4.45 0.00 38.62 4.85
3573 3740 1.063266 TGGAAAAAGGTCCTTGCAGGT 60.063 47.619 4.45 0.00 38.62 4.00
3687 3854 2.064581 AAGGGCCGAACGGATAGCT 61.065 57.895 17.63 0.00 37.50 3.32
3784 3951 3.290308 ACAAGCTCAAGAGTAGACACG 57.710 47.619 0.00 0.00 0.00 4.49
3945 4112 7.020827 TCCCTTGACATAGAACAAGAATTCT 57.979 36.000 0.88 0.88 43.98 2.40
3984 4151 3.798202 ACAAGCAGGTTCGATATCCTTC 58.202 45.455 0.00 0.00 30.91 3.46
4163 4350 9.632638 AACTGACTGATAAGGCATATTTATGTT 57.367 29.630 0.00 0.00 36.11 2.71
4219 4409 6.764560 ACATCTTTCATGAAAGCTTGCTTTTT 59.235 30.769 33.93 18.30 45.48 1.94
4264 4455 4.640771 TCTGATAGAGTTTGGCTTTGGT 57.359 40.909 0.00 0.00 0.00 3.67
4271 4462 1.761784 AGTTTGGCTTTGGTTCATGCA 59.238 42.857 0.00 0.00 0.00 3.96
4286 4477 6.488344 TGGTTCATGCAAGTCAACTTACATTA 59.512 34.615 5.97 0.00 37.74 1.90
4326 4517 5.379706 AGCCAGCTTGGTAAAATAGATCT 57.620 39.130 0.00 0.00 40.46 2.75
4343 4535 4.930963 AGATCTACTTTCAGACATGAGCG 58.069 43.478 0.00 0.00 36.61 5.03
4348 4540 0.684535 TTTCAGACATGAGCGGTGGA 59.315 50.000 0.00 0.00 36.61 4.02
4361 4559 2.438021 AGCGGTGGATCCTAGCATTTAA 59.562 45.455 22.15 0.00 0.00 1.52
4379 4577 7.237920 CATTTAAGGAAATGGCTTTATGTGC 57.762 36.000 3.02 0.00 45.57 4.57
4380 4578 5.991933 TTAAGGAAATGGCTTTATGTGCA 57.008 34.783 0.00 0.00 0.00 4.57
4381 4579 4.888326 AAGGAAATGGCTTTATGTGCAA 57.112 36.364 0.00 0.00 0.00 4.08
4382 4580 5.425196 AAGGAAATGGCTTTATGTGCAAT 57.575 34.783 0.00 0.00 0.00 3.56
4383 4581 4.761975 AGGAAATGGCTTTATGTGCAATG 58.238 39.130 0.00 0.00 0.00 2.82
4384 4582 3.872771 GGAAATGGCTTTATGTGCAATGG 59.127 43.478 0.00 0.00 0.00 3.16
4385 4583 4.382901 GGAAATGGCTTTATGTGCAATGGA 60.383 41.667 0.00 0.00 0.00 3.41
4386 4584 4.822685 AATGGCTTTATGTGCAATGGAA 57.177 36.364 0.00 0.00 0.00 3.53
4387 4585 4.822685 ATGGCTTTATGTGCAATGGAAA 57.177 36.364 0.00 0.00 0.00 3.13
4388 4586 4.822685 TGGCTTTATGTGCAATGGAAAT 57.177 36.364 0.00 0.00 0.00 2.17
4389 4587 4.757594 TGGCTTTATGTGCAATGGAAATC 58.242 39.130 0.00 0.00 0.00 2.17
4390 4588 3.798337 GGCTTTATGTGCAATGGAAATCG 59.202 43.478 0.00 0.00 0.00 3.34
4391 4589 3.243643 GCTTTATGTGCAATGGAAATCGC 59.756 43.478 0.00 0.00 0.00 4.58
4392 4590 4.675510 CTTTATGTGCAATGGAAATCGCT 58.324 39.130 0.00 0.00 0.00 4.93
4393 4591 2.857592 ATGTGCAATGGAAATCGCTC 57.142 45.000 0.00 0.00 0.00 5.03
4394 4592 0.447406 TGTGCAATGGAAATCGCTCG 59.553 50.000 0.00 0.00 0.00 5.03
4395 4593 0.863119 GTGCAATGGAAATCGCTCGC 60.863 55.000 0.00 0.00 0.00 5.03
4396 4594 1.304509 TGCAATGGAAATCGCTCGCA 61.305 50.000 0.00 0.00 0.00 5.10
4397 4595 0.029834 GCAATGGAAATCGCTCGCAT 59.970 50.000 0.00 0.00 0.00 4.73
4398 4596 1.750351 CAATGGAAATCGCTCGCATG 58.250 50.000 0.00 0.00 0.00 4.06
4399 4597 0.029834 AATGGAAATCGCTCGCATGC 59.970 50.000 7.91 7.91 0.00 4.06
4400 4598 0.816825 ATGGAAATCGCTCGCATGCT 60.817 50.000 17.13 0.00 0.00 3.79
4401 4599 0.179086 TGGAAATCGCTCGCATGCTA 60.179 50.000 17.13 3.43 0.00 3.49
4402 4600 0.510359 GGAAATCGCTCGCATGCTAG 59.490 55.000 17.13 15.79 0.00 3.42
4403 4601 0.510359 GAAATCGCTCGCATGCTAGG 59.490 55.000 19.71 10.55 0.00 3.02
4404 4602 0.179073 AAATCGCTCGCATGCTAGGT 60.179 50.000 19.71 0.24 0.00 3.08
4405 4603 0.877649 AATCGCTCGCATGCTAGGTG 60.878 55.000 19.71 13.39 0.00 4.00
4406 4604 2.021068 ATCGCTCGCATGCTAGGTGT 62.021 55.000 19.71 0.00 0.00 4.16
4407 4605 2.520039 CGCTCGCATGCTAGGTGTG 61.520 63.158 19.71 6.80 0.00 3.82
4408 4606 1.153568 GCTCGCATGCTAGGTGTGA 60.154 57.895 19.71 5.29 35.10 3.58
4409 4607 2.969157 CTCGCATGCTAGGTGTGAG 58.031 57.895 17.13 9.04 44.69 3.51
4410 4608 0.529337 CTCGCATGCTAGGTGTGAGG 60.529 60.000 17.13 0.00 45.71 3.86
4411 4609 1.219124 CGCATGCTAGGTGTGAGGT 59.781 57.895 17.13 0.00 0.00 3.85
4412 4610 0.391661 CGCATGCTAGGTGTGAGGTT 60.392 55.000 17.13 0.00 0.00 3.50
4413 4611 1.089920 GCATGCTAGGTGTGAGGTTG 58.910 55.000 11.37 0.00 0.00 3.77
4414 4612 1.742761 CATGCTAGGTGTGAGGTTGG 58.257 55.000 0.00 0.00 0.00 3.77
4415 4613 1.003580 CATGCTAGGTGTGAGGTTGGT 59.996 52.381 0.00 0.00 0.00 3.67
4416 4614 0.685097 TGCTAGGTGTGAGGTTGGTC 59.315 55.000 0.00 0.00 0.00 4.02
4417 4615 0.977395 GCTAGGTGTGAGGTTGGTCT 59.023 55.000 0.00 0.00 0.00 3.85
4418 4616 2.176889 GCTAGGTGTGAGGTTGGTCTA 58.823 52.381 0.00 0.00 0.00 2.59
4419 4617 2.166664 GCTAGGTGTGAGGTTGGTCTAG 59.833 54.545 0.00 0.00 0.00 2.43
4420 4618 2.400467 AGGTGTGAGGTTGGTCTAGT 57.600 50.000 0.00 0.00 0.00 2.57
4421 4619 3.537795 AGGTGTGAGGTTGGTCTAGTA 57.462 47.619 0.00 0.00 0.00 1.82
4422 4620 3.853207 AGGTGTGAGGTTGGTCTAGTAA 58.147 45.455 0.00 0.00 0.00 2.24
4423 4621 4.228824 AGGTGTGAGGTTGGTCTAGTAAA 58.771 43.478 0.00 0.00 0.00 2.01
4424 4622 4.040095 AGGTGTGAGGTTGGTCTAGTAAAC 59.960 45.833 0.00 0.00 0.00 2.01
4425 4623 4.040095 GGTGTGAGGTTGGTCTAGTAAACT 59.960 45.833 0.00 0.00 0.00 2.66
4426 4624 5.454329 GGTGTGAGGTTGGTCTAGTAAACTT 60.454 44.000 0.00 0.00 0.00 2.66
4427 4625 6.239402 GGTGTGAGGTTGGTCTAGTAAACTTA 60.239 42.308 0.00 0.00 0.00 2.24
4428 4626 7.384477 GTGTGAGGTTGGTCTAGTAAACTTAT 58.616 38.462 0.00 0.00 0.00 1.73
4429 4627 7.876582 GTGTGAGGTTGGTCTAGTAAACTTATT 59.123 37.037 0.00 0.00 0.00 1.40
4430 4628 8.434392 TGTGAGGTTGGTCTAGTAAACTTATTT 58.566 33.333 0.00 0.00 0.00 1.40
4431 4629 9.933723 GTGAGGTTGGTCTAGTAAACTTATTTA 57.066 33.333 0.00 0.00 0.00 1.40
4448 4646 8.661352 ACTTATTTAAGTTGCATGCTTTTGTT 57.339 26.923 20.33 7.79 43.57 2.83
4449 4647 8.764287 ACTTATTTAAGTTGCATGCTTTTGTTC 58.236 29.630 20.33 1.67 43.57 3.18
4450 4648 8.885494 TTATTTAAGTTGCATGCTTTTGTTCT 57.115 26.923 20.33 3.92 0.00 3.01
4451 4649 9.973450 TTATTTAAGTTGCATGCTTTTGTTCTA 57.027 25.926 20.33 0.09 0.00 2.10
4452 4650 7.928908 TTTAAGTTGCATGCTTTTGTTCTAG 57.071 32.000 20.33 0.00 0.00 2.43
4453 4651 5.772825 AAGTTGCATGCTTTTGTTCTAGA 57.227 34.783 20.33 0.00 0.00 2.43
4454 4652 5.772825 AGTTGCATGCTTTTGTTCTAGAA 57.227 34.783 20.33 0.00 0.00 2.10
4455 4653 6.336842 AGTTGCATGCTTTTGTTCTAGAAT 57.663 33.333 20.33 0.00 0.00 2.40
4456 4654 6.385033 AGTTGCATGCTTTTGTTCTAGAATC 58.615 36.000 20.33 3.48 0.00 2.52
4457 4655 6.208204 AGTTGCATGCTTTTGTTCTAGAATCT 59.792 34.615 20.33 0.00 0.00 2.40
4458 4656 7.391554 AGTTGCATGCTTTTGTTCTAGAATCTA 59.608 33.333 20.33 0.00 0.00 1.98
4459 4657 7.312657 TGCATGCTTTTGTTCTAGAATCTAG 57.687 36.000 20.33 10.93 0.00 2.43
4460 4658 7.105588 TGCATGCTTTTGTTCTAGAATCTAGA 58.894 34.615 20.33 15.47 0.00 2.43
4461 4659 7.065085 TGCATGCTTTTGTTCTAGAATCTAGAC 59.935 37.037 18.73 14.02 0.00 2.59
4462 4660 7.065085 GCATGCTTTTGTTCTAGAATCTAGACA 59.935 37.037 18.73 16.08 0.00 3.41
4463 4661 9.107177 CATGCTTTTGTTCTAGAATCTAGACAT 57.893 33.333 18.73 13.61 0.00 3.06
4464 4662 9.678260 ATGCTTTTGTTCTAGAATCTAGACATT 57.322 29.630 18.73 1.77 0.00 2.71
4465 4663 8.939929 TGCTTTTGTTCTAGAATCTAGACATTG 58.060 33.333 18.73 12.78 0.00 2.82
4466 4664 9.155975 GCTTTTGTTCTAGAATCTAGACATTGA 57.844 33.333 18.73 2.21 0.00 2.57
4477 4675 9.491675 AGAATCTAGACATTGATTATTGCTCTG 57.508 33.333 0.00 0.00 33.60 3.35
4478 4676 9.270640 GAATCTAGACATTGATTATTGCTCTGT 57.729 33.333 0.00 0.00 33.60 3.41
4479 4677 8.604640 ATCTAGACATTGATTATTGCTCTGTG 57.395 34.615 0.00 0.00 0.00 3.66
4480 4678 7.785033 TCTAGACATTGATTATTGCTCTGTGA 58.215 34.615 0.00 0.00 0.00 3.58
4481 4679 6.674694 AGACATTGATTATTGCTCTGTGAC 57.325 37.500 0.00 0.00 0.00 3.67
4482 4680 6.413052 AGACATTGATTATTGCTCTGTGACT 58.587 36.000 0.00 0.00 0.00 3.41
4483 4681 6.883217 AGACATTGATTATTGCTCTGTGACTT 59.117 34.615 0.00 0.00 0.00 3.01
4484 4682 8.043113 AGACATTGATTATTGCTCTGTGACTTA 58.957 33.333 0.00 0.00 0.00 2.24
4485 4683 8.743085 ACATTGATTATTGCTCTGTGACTTAT 57.257 30.769 0.00 0.00 0.00 1.73
4486 4684 8.618677 ACATTGATTATTGCTCTGTGACTTATG 58.381 33.333 0.00 0.00 0.00 1.90
4487 4685 8.618677 CATTGATTATTGCTCTGTGACTTATGT 58.381 33.333 0.00 0.00 0.00 2.29
4488 4686 9.836864 ATTGATTATTGCTCTGTGACTTATGTA 57.163 29.630 0.00 0.00 0.00 2.29
4489 4687 8.877808 TGATTATTGCTCTGTGACTTATGTAG 57.122 34.615 0.00 0.00 0.00 2.74
4490 4688 8.695456 TGATTATTGCTCTGTGACTTATGTAGA 58.305 33.333 0.00 0.00 0.00 2.59
4491 4689 9.703892 GATTATTGCTCTGTGACTTATGTAGAT 57.296 33.333 0.00 0.00 0.00 1.98
4495 4693 7.823745 TGCTCTGTGACTTATGTAGATATCA 57.176 36.000 5.32 0.00 0.00 2.15
4496 4694 8.414629 TGCTCTGTGACTTATGTAGATATCAT 57.585 34.615 5.32 0.00 0.00 2.45
4497 4695 8.518702 TGCTCTGTGACTTATGTAGATATCATC 58.481 37.037 5.32 0.00 0.00 2.92
4498 4696 8.739039 GCTCTGTGACTTATGTAGATATCATCT 58.261 37.037 5.32 0.00 43.33 2.90
4566 4764 7.842887 ACAAGAGAAATATACTACTCCCTCC 57.157 40.000 0.00 0.00 0.00 4.30
4567 4765 6.490721 ACAAGAGAAATATACTACTCCCTCCG 59.509 42.308 0.00 0.00 0.00 4.63
4568 4766 6.203526 AGAGAAATATACTACTCCCTCCGT 57.796 41.667 0.00 0.00 0.00 4.69
4569 4767 6.240145 AGAGAAATATACTACTCCCTCCGTC 58.760 44.000 0.00 0.00 0.00 4.79
4570 4768 5.323581 AGAAATATACTACTCCCTCCGTCC 58.676 45.833 0.00 0.00 0.00 4.79
4571 4769 2.847327 TATACTACTCCCTCCGTCCG 57.153 55.000 0.00 0.00 0.00 4.79
4572 4770 0.110104 ATACTACTCCCTCCGTCCGG 59.890 60.000 0.00 0.00 0.00 5.14
4573 4771 0.982852 TACTACTCCCTCCGTCCGGA 60.983 60.000 0.00 0.00 42.90 5.14
4574 4772 1.077212 CTACTCCCTCCGTCCGGAA 60.077 63.158 5.23 0.00 44.66 4.30
4575 4773 0.467659 CTACTCCCTCCGTCCGGAAT 60.468 60.000 5.23 0.00 44.66 3.01
4576 4774 0.032813 TACTCCCTCCGTCCGGAATT 60.033 55.000 5.23 0.00 44.66 2.17
4577 4775 0.908180 ACTCCCTCCGTCCGGAATTT 60.908 55.000 5.23 0.00 44.66 1.82
4578 4776 0.252197 CTCCCTCCGTCCGGAATTTT 59.748 55.000 5.23 0.00 44.66 1.82
4579 4777 1.483415 CTCCCTCCGTCCGGAATTTTA 59.517 52.381 5.23 0.00 44.66 1.52
4580 4778 1.907936 TCCCTCCGTCCGGAATTTTAA 59.092 47.619 5.23 0.00 44.66 1.52
4581 4779 2.305343 TCCCTCCGTCCGGAATTTTAAA 59.695 45.455 5.23 0.00 44.66 1.52
4582 4780 2.421073 CCCTCCGTCCGGAATTTTAAAC 59.579 50.000 5.23 0.00 44.66 2.01
4583 4781 3.075884 CCTCCGTCCGGAATTTTAAACA 58.924 45.455 5.23 0.00 44.66 2.83
4584 4782 3.120095 CCTCCGTCCGGAATTTTAAACAC 60.120 47.826 5.23 0.00 44.66 3.32
4585 4783 2.479656 TCCGTCCGGAATTTTAAACACG 59.520 45.455 5.23 1.08 42.05 4.49
4586 4784 2.223845 CCGTCCGGAATTTTAAACACGT 59.776 45.455 5.23 0.00 37.50 4.49
4587 4785 3.472431 CGTCCGGAATTTTAAACACGTC 58.528 45.455 5.23 0.00 0.00 4.34
4588 4786 3.184986 CGTCCGGAATTTTAAACACGTCT 59.815 43.478 5.23 0.00 0.00 4.18
4589 4787 4.385447 CGTCCGGAATTTTAAACACGTCTA 59.615 41.667 5.23 0.00 0.00 2.59
4590 4788 5.443693 CGTCCGGAATTTTAAACACGTCTAG 60.444 44.000 5.23 0.00 0.00 2.43
4591 4789 5.634859 GTCCGGAATTTTAAACACGTCTAGA 59.365 40.000 5.23 0.00 0.00 2.43
4592 4790 6.312180 GTCCGGAATTTTAAACACGTCTAGAT 59.688 38.462 5.23 0.00 0.00 1.98
4593 4791 7.489113 GTCCGGAATTTTAAACACGTCTAGATA 59.511 37.037 5.23 0.00 0.00 1.98
4594 4792 7.489113 TCCGGAATTTTAAACACGTCTAGATAC 59.511 37.037 0.00 0.00 0.00 2.24
4595 4793 7.276218 CCGGAATTTTAAACACGTCTAGATACA 59.724 37.037 0.00 0.00 0.00 2.29
4596 4794 8.814235 CGGAATTTTAAACACGTCTAGATACAT 58.186 33.333 0.00 0.00 0.00 2.29
4599 4797 9.661563 AATTTTAAACACGTCTAGATACATCCA 57.338 29.630 0.00 0.00 0.00 3.41
4600 4798 9.832445 ATTTTAAACACGTCTAGATACATCCAT 57.168 29.630 0.00 0.00 0.00 3.41
4601 4799 9.661563 TTTTAAACACGTCTAGATACATCCATT 57.338 29.630 0.00 0.00 0.00 3.16
4602 4800 9.661563 TTTAAACACGTCTAGATACATCCATTT 57.338 29.630 0.00 0.00 0.00 2.32
4603 4801 7.772332 AAACACGTCTAGATACATCCATTTC 57.228 36.000 0.00 0.00 0.00 2.17
4604 4802 6.716934 ACACGTCTAGATACATCCATTTCT 57.283 37.500 0.00 0.00 0.00 2.52
4605 4803 6.507900 ACACGTCTAGATACATCCATTTCTG 58.492 40.000 0.00 0.00 0.00 3.02
4606 4804 5.403766 CACGTCTAGATACATCCATTTCTGC 59.596 44.000 0.00 0.00 0.00 4.26
4607 4805 4.618912 CGTCTAGATACATCCATTTCTGCG 59.381 45.833 0.00 0.00 0.00 5.18
4608 4806 5.562890 CGTCTAGATACATCCATTTCTGCGA 60.563 44.000 0.00 0.00 0.00 5.10
4609 4807 5.631512 GTCTAGATACATCCATTTCTGCGAC 59.368 44.000 0.00 0.00 0.00 5.19
4610 4808 4.406648 AGATACATCCATTTCTGCGACA 57.593 40.909 0.00 0.00 0.00 4.35
4611 4809 4.769688 AGATACATCCATTTCTGCGACAA 58.230 39.130 0.00 0.00 0.00 3.18
4612 4810 4.813161 AGATACATCCATTTCTGCGACAAG 59.187 41.667 0.00 0.00 0.00 3.16
4613 4811 2.783135 ACATCCATTTCTGCGACAAGT 58.217 42.857 0.00 0.00 0.00 3.16
4614 4812 3.937814 ACATCCATTTCTGCGACAAGTA 58.062 40.909 0.00 0.00 0.00 2.24
4615 4813 4.323417 ACATCCATTTCTGCGACAAGTAA 58.677 39.130 0.00 0.00 0.00 2.24
4616 4814 4.943705 ACATCCATTTCTGCGACAAGTAAT 59.056 37.500 0.00 0.00 0.00 1.89
4617 4815 5.415701 ACATCCATTTCTGCGACAAGTAATT 59.584 36.000 0.00 0.00 0.00 1.40
4618 4816 5.545658 TCCATTTCTGCGACAAGTAATTC 57.454 39.130 0.00 0.00 0.00 2.17
4619 4817 4.092821 TCCATTTCTGCGACAAGTAATTCG 59.907 41.667 0.00 0.00 38.31 3.34
4620 4818 4.334443 CATTTCTGCGACAAGTAATTCGG 58.666 43.478 0.00 0.00 35.73 4.30
4621 4819 1.355971 TCTGCGACAAGTAATTCGGC 58.644 50.000 0.00 0.00 35.73 5.54
4622 4820 1.075542 CTGCGACAAGTAATTCGGCA 58.924 50.000 0.00 0.00 35.73 5.69
4623 4821 0.793861 TGCGACAAGTAATTCGGCAC 59.206 50.000 0.00 0.00 35.73 5.01
4641 4839 5.599999 GGCACGGATGGAGTATTATATCT 57.400 43.478 0.00 0.00 0.00 1.98
4642 4840 6.710597 GGCACGGATGGAGTATTATATCTA 57.289 41.667 0.00 0.00 0.00 1.98
4643 4841 7.108841 GGCACGGATGGAGTATTATATCTAA 57.891 40.000 0.00 0.00 0.00 2.10
4644 4842 7.727181 GGCACGGATGGAGTATTATATCTAAT 58.273 38.462 0.00 0.00 0.00 1.73
4645 4843 7.868415 GGCACGGATGGAGTATTATATCTAATC 59.132 40.741 0.00 0.00 0.00 1.75
4646 4844 8.634444 GCACGGATGGAGTATTATATCTAATCT 58.366 37.037 0.00 0.00 0.00 2.40
4688 4886 9.574516 AGTTATGGTTAGTCAAGAATTTCACTT 57.425 29.630 0.00 0.00 0.00 3.16
4696 4894 9.744468 TTAGTCAAGAATTTCACTTTTTAAGGC 57.256 29.630 0.00 0.00 0.00 4.35
4697 4895 7.781056 AGTCAAGAATTTCACTTTTTAAGGCA 58.219 30.769 0.00 0.00 0.00 4.75
4698 4896 7.922811 AGTCAAGAATTTCACTTTTTAAGGCAG 59.077 33.333 0.00 0.00 0.00 4.85
4699 4897 7.706607 GTCAAGAATTTCACTTTTTAAGGCAGT 59.293 33.333 0.00 0.00 0.00 4.40
4700 4898 8.908903 TCAAGAATTTCACTTTTTAAGGCAGTA 58.091 29.630 0.00 0.00 0.00 2.74
4701 4899 9.696917 CAAGAATTTCACTTTTTAAGGCAGTAT 57.303 29.630 0.00 0.00 0.00 2.12
4702 4900 9.696917 AAGAATTTCACTTTTTAAGGCAGTATG 57.303 29.630 0.00 0.00 40.87 2.39
4703 4901 8.860088 AGAATTTCACTTTTTAAGGCAGTATGT 58.140 29.630 0.00 0.00 39.31 2.29
4704 4902 9.476202 GAATTTCACTTTTTAAGGCAGTATGTT 57.524 29.630 0.00 0.00 39.31 2.71
4705 4903 9.476202 AATTTCACTTTTTAAGGCAGTATGTTC 57.524 29.630 0.00 0.00 39.31 3.18
4706 4904 7.817418 TTCACTTTTTAAGGCAGTATGTTCT 57.183 32.000 0.00 0.00 39.31 3.01
4707 4905 8.911918 TTCACTTTTTAAGGCAGTATGTTCTA 57.088 30.769 0.00 0.00 39.31 2.10
4708 4906 8.547967 TCACTTTTTAAGGCAGTATGTTCTAG 57.452 34.615 0.00 0.00 39.31 2.43
4709 4907 8.372459 TCACTTTTTAAGGCAGTATGTTCTAGA 58.628 33.333 0.00 0.00 39.31 2.43
4710 4908 9.167311 CACTTTTTAAGGCAGTATGTTCTAGAT 57.833 33.333 0.00 0.00 39.31 1.98
4711 4909 9.384764 ACTTTTTAAGGCAGTATGTTCTAGATC 57.615 33.333 0.00 0.00 39.31 2.75
4712 4910 8.732746 TTTTTAAGGCAGTATGTTCTAGATCC 57.267 34.615 0.00 0.00 39.31 3.36
4713 4911 4.965200 AAGGCAGTATGTTCTAGATCCC 57.035 45.455 0.00 0.00 39.31 3.85
4714 4912 4.206244 AGGCAGTATGTTCTAGATCCCT 57.794 45.455 0.00 0.00 39.31 4.20
4715 4913 4.561752 AGGCAGTATGTTCTAGATCCCTT 58.438 43.478 0.00 0.00 39.31 3.95
4716 4914 4.971924 AGGCAGTATGTTCTAGATCCCTTT 59.028 41.667 0.00 0.00 39.31 3.11
4717 4915 5.071115 AGGCAGTATGTTCTAGATCCCTTTC 59.929 44.000 0.00 0.00 39.31 2.62
4718 4916 5.163301 GGCAGTATGTTCTAGATCCCTTTCA 60.163 44.000 0.00 0.00 39.31 2.69
4719 4917 5.988561 GCAGTATGTTCTAGATCCCTTTCAG 59.011 44.000 0.00 0.00 39.31 3.02
4720 4918 6.407525 GCAGTATGTTCTAGATCCCTTTCAGT 60.408 42.308 0.00 0.00 39.31 3.41
4721 4919 7.560368 CAGTATGTTCTAGATCCCTTTCAGTT 58.440 38.462 0.00 0.00 0.00 3.16
4722 4920 8.043710 CAGTATGTTCTAGATCCCTTTCAGTTT 58.956 37.037 0.00 0.00 0.00 2.66
4723 4921 9.268282 AGTATGTTCTAGATCCCTTTCAGTTTA 57.732 33.333 0.00 0.00 0.00 2.01
4724 4922 9.315525 GTATGTTCTAGATCCCTTTCAGTTTAC 57.684 37.037 0.00 0.00 0.00 2.01
4725 4923 7.311092 TGTTCTAGATCCCTTTCAGTTTACA 57.689 36.000 0.00 0.00 0.00 2.41
4726 4924 7.741785 TGTTCTAGATCCCTTTCAGTTTACAA 58.258 34.615 0.00 0.00 0.00 2.41
4727 4925 8.215050 TGTTCTAGATCCCTTTCAGTTTACAAA 58.785 33.333 0.00 0.00 0.00 2.83
4728 4926 9.063615 GTTCTAGATCCCTTTCAGTTTACAAAA 57.936 33.333 0.00 0.00 0.00 2.44
4729 4927 9.635404 TTCTAGATCCCTTTCAGTTTACAAAAA 57.365 29.630 0.00 0.00 0.00 1.94
4730 4928 9.807921 TCTAGATCCCTTTCAGTTTACAAAAAT 57.192 29.630 0.00 0.00 0.00 1.82
4735 4933 9.942850 ATCCCTTTCAGTTTACAAAAATATTGG 57.057 29.630 0.00 0.00 0.00 3.16
4736 4934 9.148879 TCCCTTTCAGTTTACAAAAATATTGGA 57.851 29.630 0.00 0.00 0.00 3.53
4737 4935 9.771534 CCCTTTCAGTTTACAAAAATATTGGAA 57.228 29.630 0.00 0.00 0.00 3.53
4749 4947 9.811995 ACAAAAATATTGGAACATCTGATCATG 57.188 29.630 0.00 0.00 39.30 3.07
4752 4950 8.991783 AAATATTGGAACATCTGATCATGAGT 57.008 30.769 0.09 0.00 39.30 3.41
4754 4952 9.499479 AATATTGGAACATCTGATCATGAGTAC 57.501 33.333 0.09 0.00 39.30 2.73
4755 4953 5.282055 TGGAACATCTGATCATGAGTACC 57.718 43.478 0.09 2.01 0.00 3.34
4756 4954 4.964897 TGGAACATCTGATCATGAGTACCT 59.035 41.667 0.09 0.00 0.00 3.08
4757 4955 6.136155 TGGAACATCTGATCATGAGTACCTA 58.864 40.000 0.09 0.00 0.00 3.08
4758 4956 6.266330 TGGAACATCTGATCATGAGTACCTAG 59.734 42.308 0.09 0.00 0.00 3.02
4759 4957 6.266558 GGAACATCTGATCATGAGTACCTAGT 59.733 42.308 0.09 0.00 0.00 2.57
4760 4958 7.201956 GGAACATCTGATCATGAGTACCTAGTT 60.202 40.741 0.09 0.91 0.00 2.24
4761 4959 7.283625 ACATCTGATCATGAGTACCTAGTTC 57.716 40.000 0.09 0.00 0.00 3.01
4762 4960 6.836007 ACATCTGATCATGAGTACCTAGTTCA 59.164 38.462 0.09 0.00 0.00 3.18
4763 4961 7.343057 ACATCTGATCATGAGTACCTAGTTCAA 59.657 37.037 0.09 0.00 0.00 2.69
4764 4962 7.904558 TCTGATCATGAGTACCTAGTTCAAT 57.095 36.000 0.09 0.00 0.00 2.57
4765 4963 7.946207 TCTGATCATGAGTACCTAGTTCAATC 58.054 38.462 0.09 0.00 0.00 2.67
4766 4964 7.782168 TCTGATCATGAGTACCTAGTTCAATCT 59.218 37.037 0.09 0.00 0.00 2.40
4767 4965 8.311395 TGATCATGAGTACCTAGTTCAATCTT 57.689 34.615 0.09 0.00 0.00 2.40
4768 4966 8.200120 TGATCATGAGTACCTAGTTCAATCTTG 58.800 37.037 0.09 0.00 0.00 3.02
4769 4967 6.341316 TCATGAGTACCTAGTTCAATCTTGC 58.659 40.000 0.00 0.00 0.00 4.01
4770 4968 5.738619 TGAGTACCTAGTTCAATCTTGCA 57.261 39.130 0.00 0.00 0.00 4.08
4771 4969 6.299805 TGAGTACCTAGTTCAATCTTGCAT 57.700 37.500 0.00 0.00 0.00 3.96
4772 4970 6.108687 TGAGTACCTAGTTCAATCTTGCATG 58.891 40.000 0.00 0.00 0.00 4.06
4773 4971 4.878397 AGTACCTAGTTCAATCTTGCATGC 59.122 41.667 11.82 11.82 0.00 4.06
4774 4972 3.689347 ACCTAGTTCAATCTTGCATGCA 58.311 40.909 18.46 18.46 0.00 3.96
4775 4973 4.275810 ACCTAGTTCAATCTTGCATGCAT 58.724 39.130 23.37 3.27 0.00 3.96
4776 4974 4.097437 ACCTAGTTCAATCTTGCATGCATG 59.903 41.667 23.37 23.63 0.00 4.06
4777 4975 4.337274 CCTAGTTCAATCTTGCATGCATGA 59.663 41.667 31.21 31.21 35.17 3.07
4778 4976 5.009710 CCTAGTTCAATCTTGCATGCATGAT 59.990 40.000 32.42 32.42 40.88 2.45
4779 4977 4.682787 AGTTCAATCTTGCATGCATGATG 58.317 39.130 36.04 29.40 39.65 3.07
4780 4978 4.401202 AGTTCAATCTTGCATGCATGATGA 59.599 37.500 36.04 30.57 39.65 2.92
4781 4979 5.069119 AGTTCAATCTTGCATGCATGATGAT 59.931 36.000 36.04 24.66 39.65 2.45
4782 4980 6.264518 AGTTCAATCTTGCATGCATGATGATA 59.735 34.615 36.04 25.32 39.65 2.15
4783 4981 6.834168 TCAATCTTGCATGCATGATGATAT 57.166 33.333 36.04 23.81 39.65 1.63
4784 4982 6.852664 TCAATCTTGCATGCATGATGATATC 58.147 36.000 36.04 10.88 39.65 1.63
4785 4983 5.836821 ATCTTGCATGCATGATGATATCC 57.163 39.130 35.34 10.13 38.73 2.59
4786 4984 4.658063 TCTTGCATGCATGATGATATCCA 58.342 39.130 30.64 12.71 33.31 3.41
4787 4985 5.261216 TCTTGCATGCATGATGATATCCAT 58.739 37.500 30.64 0.00 38.43 3.41
4788 4986 4.981806 TGCATGCATGATGATATCCATG 57.018 40.909 30.64 14.34 42.13 3.66
4798 4996 8.738199 CATGATGATATCCATGCAGTTTTAAC 57.262 34.615 8.46 0.00 35.17 2.01
4799 4997 6.958255 TGATGATATCCATGCAGTTTTAACG 58.042 36.000 0.00 0.00 35.17 3.18
4800 4998 5.749596 TGATATCCATGCAGTTTTAACGG 57.250 39.130 0.00 0.00 0.00 4.44
4801 4999 5.189928 TGATATCCATGCAGTTTTAACGGT 58.810 37.500 0.00 0.00 0.00 4.83
4802 5000 5.295787 TGATATCCATGCAGTTTTAACGGTC 59.704 40.000 0.00 0.00 0.00 4.79
4803 5001 3.134574 TCCATGCAGTTTTAACGGTCT 57.865 42.857 0.00 0.00 0.00 3.85
4804 5002 3.482436 TCCATGCAGTTTTAACGGTCTT 58.518 40.909 0.00 0.00 0.00 3.01
4805 5003 3.500680 TCCATGCAGTTTTAACGGTCTTC 59.499 43.478 0.00 0.00 0.00 2.87
4806 5004 3.502211 CCATGCAGTTTTAACGGTCTTCT 59.498 43.478 0.00 0.00 0.00 2.85
4807 5005 4.693566 CCATGCAGTTTTAACGGTCTTCTA 59.306 41.667 0.00 0.00 0.00 2.10
4808 5006 5.163854 CCATGCAGTTTTAACGGTCTTCTAG 60.164 44.000 0.00 0.00 0.00 2.43
4809 5007 5.204409 TGCAGTTTTAACGGTCTTCTAGA 57.796 39.130 0.00 0.00 0.00 2.43
4810 5008 5.790593 TGCAGTTTTAACGGTCTTCTAGAT 58.209 37.500 0.00 0.00 0.00 1.98
4811 5009 6.228258 TGCAGTTTTAACGGTCTTCTAGATT 58.772 36.000 0.00 0.00 0.00 2.40
4812 5010 6.708949 TGCAGTTTTAACGGTCTTCTAGATTT 59.291 34.615 0.00 0.00 0.00 2.17
4813 5011 7.095355 TGCAGTTTTAACGGTCTTCTAGATTTC 60.095 37.037 0.00 0.00 0.00 2.17
4814 5012 7.095355 GCAGTTTTAACGGTCTTCTAGATTTCA 60.095 37.037 0.00 0.00 0.00 2.69
4815 5013 8.436200 CAGTTTTAACGGTCTTCTAGATTTCAG 58.564 37.037 0.00 0.00 0.00 3.02
4816 5014 8.148999 AGTTTTAACGGTCTTCTAGATTTCAGT 58.851 33.333 0.00 0.00 0.00 3.41
4817 5015 9.415544 GTTTTAACGGTCTTCTAGATTTCAGTA 57.584 33.333 0.00 0.00 0.00 2.74
4818 5016 9.985730 TTTTAACGGTCTTCTAGATTTCAGTAA 57.014 29.630 0.00 0.00 0.00 2.24
4819 5017 9.985730 TTTAACGGTCTTCTAGATTTCAGTAAA 57.014 29.630 0.00 0.00 0.00 2.01
4820 5018 9.985730 TTAACGGTCTTCTAGATTTCAGTAAAA 57.014 29.630 0.00 0.00 0.00 1.52
4821 5019 8.897872 AACGGTCTTCTAGATTTCAGTAAAAA 57.102 30.769 0.00 0.00 0.00 1.94
4822 5020 8.535690 ACGGTCTTCTAGATTTCAGTAAAAAG 57.464 34.615 0.00 0.00 0.00 2.27
4823 5021 8.365647 ACGGTCTTCTAGATTTCAGTAAAAAGA 58.634 33.333 0.00 0.00 0.00 2.52
4824 5022 9.204570 CGGTCTTCTAGATTTCAGTAAAAAGAA 57.795 33.333 0.00 0.00 0.00 2.52
4833 5031 9.559732 AGATTTCAGTAAAAAGAAAAATTGGGG 57.440 29.630 0.00 0.00 37.30 4.96
4834 5032 9.337396 GATTTCAGTAAAAAGAAAAATTGGGGT 57.663 29.630 0.00 0.00 37.30 4.95
4838 5036 9.771534 TCAGTAAAAAGAAAAATTGGGGTAATG 57.228 29.630 0.00 0.00 0.00 1.90
4839 5037 8.998377 CAGTAAAAAGAAAAATTGGGGTAATGG 58.002 33.333 0.00 0.00 0.00 3.16
4840 5038 6.892658 AAAAAGAAAAATTGGGGTAATGGC 57.107 33.333 0.00 0.00 0.00 4.40
4841 5039 4.568072 AAGAAAAATTGGGGTAATGGCC 57.432 40.909 0.00 0.00 0.00 5.36
4842 5040 3.525862 AGAAAAATTGGGGTAATGGCCA 58.474 40.909 8.56 8.56 0.00 5.36
4843 5041 3.519107 AGAAAAATTGGGGTAATGGCCAG 59.481 43.478 13.05 0.00 0.00 4.85
4844 5042 2.640284 AAATTGGGGTAATGGCCAGT 57.360 45.000 13.05 12.48 0.00 4.00
4845 5043 1.864669 AATTGGGGTAATGGCCAGTG 58.135 50.000 17.71 0.00 0.00 3.66
4846 5044 0.687427 ATTGGGGTAATGGCCAGTGC 60.687 55.000 17.71 15.40 0.00 4.40
4857 5055 3.322514 GCCAGTGCCAGTTAACTGA 57.677 52.632 32.50 14.31 45.43 3.41
4858 5056 0.875059 GCCAGTGCCAGTTAACTGAC 59.125 55.000 32.50 23.86 45.43 3.51
4859 5057 1.543429 GCCAGTGCCAGTTAACTGACT 60.543 52.381 32.50 25.33 45.43 3.41
4860 5058 2.146342 CCAGTGCCAGTTAACTGACTG 58.854 52.381 31.66 31.66 45.43 3.51
4873 5071 8.142994 AGTTAACTGACTGAAAACACATACTG 57.857 34.615 7.48 0.00 0.00 2.74
4874 5072 7.769044 AGTTAACTGACTGAAAACACATACTGT 59.231 33.333 7.48 0.00 32.89 3.55
4875 5073 9.037737 GTTAACTGACTGAAAACACATACTGTA 57.962 33.333 0.00 0.00 30.51 2.74
4876 5074 9.772973 TTAACTGACTGAAAACACATACTGTAT 57.227 29.630 0.00 0.00 30.51 2.29
4877 5075 7.658179 ACTGACTGAAAACACATACTGTATG 57.342 36.000 22.76 22.76 41.88 2.39
4879 5077 7.715249 ACTGACTGAAAACACATACTGTATGTT 59.285 33.333 26.38 14.91 46.69 2.71
4880 5078 8.445275 TGACTGAAAACACATACTGTATGTTT 57.555 30.769 26.38 19.50 46.69 2.83
4881 5079 9.549078 TGACTGAAAACACATACTGTATGTTTA 57.451 29.630 26.38 11.32 46.69 2.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.561143 TGCTGTAGGTTGGTCAAATTGT 58.439 40.909 0.00 0.00 0.00 2.71
1 2 3.612479 GCTGCTGTAGGTTGGTCAAATTG 60.612 47.826 0.00 0.00 0.00 2.32
2 3 2.558359 GCTGCTGTAGGTTGGTCAAATT 59.442 45.455 0.00 0.00 0.00 1.82
3 4 2.162681 GCTGCTGTAGGTTGGTCAAAT 58.837 47.619 0.00 0.00 0.00 2.32
4 5 1.133945 TGCTGCTGTAGGTTGGTCAAA 60.134 47.619 0.00 0.00 0.00 2.69
5 6 0.472044 TGCTGCTGTAGGTTGGTCAA 59.528 50.000 0.00 0.00 0.00 3.18
6 7 0.472044 TTGCTGCTGTAGGTTGGTCA 59.528 50.000 0.00 0.00 0.00 4.02
7 8 1.826385 ATTGCTGCTGTAGGTTGGTC 58.174 50.000 0.00 0.00 0.00 4.02
8 9 2.162681 GAATTGCTGCTGTAGGTTGGT 58.837 47.619 0.00 0.00 0.00 3.67
9 10 2.421424 GAGAATTGCTGCTGTAGGTTGG 59.579 50.000 0.00 0.00 0.00 3.77
10 11 3.076621 TGAGAATTGCTGCTGTAGGTTG 58.923 45.455 0.00 0.00 0.00 3.77
11 12 3.244700 ACTGAGAATTGCTGCTGTAGGTT 60.245 43.478 0.00 0.00 0.00 3.50
12 13 2.304180 ACTGAGAATTGCTGCTGTAGGT 59.696 45.455 0.00 0.00 0.00 3.08
13 14 2.983229 ACTGAGAATTGCTGCTGTAGG 58.017 47.619 0.00 0.00 0.00 3.18
14 15 3.999001 TGAACTGAGAATTGCTGCTGTAG 59.001 43.478 0.00 0.00 0.00 2.74
15 16 3.748048 GTGAACTGAGAATTGCTGCTGTA 59.252 43.478 0.00 0.00 0.00 2.74
16 17 2.551459 GTGAACTGAGAATTGCTGCTGT 59.449 45.455 0.00 0.00 0.00 4.40
17 18 2.551032 TGTGAACTGAGAATTGCTGCTG 59.449 45.455 0.00 0.00 0.00 4.41
18 19 2.812591 CTGTGAACTGAGAATTGCTGCT 59.187 45.455 0.00 0.00 0.00 4.24
19 20 2.810274 TCTGTGAACTGAGAATTGCTGC 59.190 45.455 0.00 0.00 0.00 5.25
20 21 3.811497 TGTCTGTGAACTGAGAATTGCTG 59.189 43.478 0.00 0.00 0.00 4.41
21 22 4.077300 TGTCTGTGAACTGAGAATTGCT 57.923 40.909 0.00 0.00 0.00 3.91
22 23 4.035558 TGTTGTCTGTGAACTGAGAATTGC 59.964 41.667 3.79 0.00 31.81 3.56
23 24 5.525012 TCTGTTGTCTGTGAACTGAGAATTG 59.475 40.000 3.79 1.67 31.81 2.32
24 25 5.674525 TCTGTTGTCTGTGAACTGAGAATT 58.325 37.500 3.79 0.00 31.81 2.17
25 26 5.282055 TCTGTTGTCTGTGAACTGAGAAT 57.718 39.130 3.79 0.00 31.81 2.40
26 27 4.442052 CCTCTGTTGTCTGTGAACTGAGAA 60.442 45.833 19.61 0.00 45.33 2.87
27 28 3.068732 CCTCTGTTGTCTGTGAACTGAGA 59.931 47.826 19.61 6.07 45.33 3.27
28 29 3.181471 ACCTCTGTTGTCTGTGAACTGAG 60.181 47.826 0.00 0.00 43.61 3.35
29 30 2.766263 ACCTCTGTTGTCTGTGAACTGA 59.234 45.455 0.00 0.00 32.38 3.41
30 31 3.126831 GACCTCTGTTGTCTGTGAACTG 58.873 50.000 0.00 0.00 0.00 3.16
31 32 2.103263 GGACCTCTGTTGTCTGTGAACT 59.897 50.000 0.00 0.00 33.22 3.01
32 33 2.158957 TGGACCTCTGTTGTCTGTGAAC 60.159 50.000 0.00 0.00 33.22 3.18
33 34 2.115427 TGGACCTCTGTTGTCTGTGAA 58.885 47.619 0.00 0.00 33.22 3.18
34 35 1.412710 GTGGACCTCTGTTGTCTGTGA 59.587 52.381 0.00 0.00 33.22 3.58
35 36 1.138859 TGTGGACCTCTGTTGTCTGTG 59.861 52.381 0.00 0.00 33.22 3.66
36 37 1.414181 CTGTGGACCTCTGTTGTCTGT 59.586 52.381 0.00 0.00 33.22 3.41
37 38 1.270518 CCTGTGGACCTCTGTTGTCTG 60.271 57.143 0.00 0.00 33.22 3.51
38 39 1.051812 CCTGTGGACCTCTGTTGTCT 58.948 55.000 0.00 0.00 33.22 3.41
39 40 0.759346 ACCTGTGGACCTCTGTTGTC 59.241 55.000 0.00 0.00 0.00 3.18
40 41 0.469917 CACCTGTGGACCTCTGTTGT 59.530 55.000 0.00 0.00 0.00 3.32
41 42 0.758734 TCACCTGTGGACCTCTGTTG 59.241 55.000 0.00 0.00 0.00 3.33
42 43 1.349026 CATCACCTGTGGACCTCTGTT 59.651 52.381 0.00 0.00 0.00 3.16
43 44 0.979665 CATCACCTGTGGACCTCTGT 59.020 55.000 0.00 0.00 0.00 3.41
44 45 1.269958 TCATCACCTGTGGACCTCTG 58.730 55.000 0.00 0.00 0.00 3.35
45 46 2.030027 TTCATCACCTGTGGACCTCT 57.970 50.000 0.00 0.00 0.00 3.69
46 47 2.237143 TGATTCATCACCTGTGGACCTC 59.763 50.000 0.00 0.00 0.00 3.85
47 48 2.269023 TGATTCATCACCTGTGGACCT 58.731 47.619 0.00 0.00 0.00 3.85
48 49 2.787473 TGATTCATCACCTGTGGACC 57.213 50.000 0.00 0.00 0.00 4.46
49 50 4.264253 TGATTGATTCATCACCTGTGGAC 58.736 43.478 0.00 0.00 36.36 4.02
50 51 4.573021 TGATTGATTCATCACCTGTGGA 57.427 40.909 0.00 0.00 36.36 4.02
51 52 5.358725 TGATTGATTGATTCATCACCTGTGG 59.641 40.000 0.00 0.00 36.36 4.17
52 53 6.445357 TGATTGATTGATTCATCACCTGTG 57.555 37.500 0.00 0.00 36.36 3.66
53 54 7.340999 TGATTGATTGATTGATTCATCACCTGT 59.659 33.333 0.00 0.00 36.36 4.00
54 55 7.712797 TGATTGATTGATTGATTCATCACCTG 58.287 34.615 0.00 0.00 36.36 4.00
55 56 7.470147 GCTGATTGATTGATTGATTCATCACCT 60.470 37.037 0.00 0.00 36.36 4.00
56 57 6.641314 GCTGATTGATTGATTGATTCATCACC 59.359 38.462 0.00 0.00 36.36 4.02
57 58 6.641314 GGCTGATTGATTGATTGATTCATCAC 59.359 38.462 0.00 0.00 36.36 3.06
58 59 6.322712 TGGCTGATTGATTGATTGATTCATCA 59.677 34.615 0.00 0.00 33.34 3.07
59 60 6.745116 TGGCTGATTGATTGATTGATTCATC 58.255 36.000 0.00 0.00 33.34 2.92
60 61 6.549736 TCTGGCTGATTGATTGATTGATTCAT 59.450 34.615 0.00 0.00 33.34 2.57
61 62 5.889289 TCTGGCTGATTGATTGATTGATTCA 59.111 36.000 0.00 0.00 0.00 2.57
62 63 6.387041 TCTGGCTGATTGATTGATTGATTC 57.613 37.500 0.00 0.00 0.00 2.52
63 64 6.978674 ATCTGGCTGATTGATTGATTGATT 57.021 33.333 0.45 0.00 29.59 2.57
64 65 7.504574 TGTTATCTGGCTGATTGATTGATTGAT 59.495 33.333 12.29 0.00 36.65 2.57
65 66 6.829811 TGTTATCTGGCTGATTGATTGATTGA 59.170 34.615 12.29 0.00 36.65 2.57
66 67 7.034685 TGTTATCTGGCTGATTGATTGATTG 57.965 36.000 12.29 0.00 36.65 2.67
67 68 6.238953 GCTGTTATCTGGCTGATTGATTGATT 60.239 38.462 12.29 0.00 36.65 2.57
78 79 1.015109 CTGCTGCTGTTATCTGGCTG 58.985 55.000 0.00 0.00 0.00 4.85
79 80 0.747283 GCTGCTGCTGTTATCTGGCT 60.747 55.000 8.53 0.00 36.03 4.75
122 123 9.603298 GCTTAGGTGTTACAAACTTACAATTAC 57.397 33.333 0.00 0.00 0.00 1.89
132 133 1.198408 GGGCGCTTAGGTGTTACAAAC 59.802 52.381 7.64 0.00 0.00 2.93
133 134 1.202782 TGGGCGCTTAGGTGTTACAAA 60.203 47.619 7.64 0.00 0.00 2.83
134 135 0.397187 TGGGCGCTTAGGTGTTACAA 59.603 50.000 7.64 0.00 0.00 2.41
135 136 0.320946 GTGGGCGCTTAGGTGTTACA 60.321 55.000 7.64 0.00 0.00 2.41
136 137 0.036671 AGTGGGCGCTTAGGTGTTAC 60.037 55.000 7.64 0.00 0.00 2.50
137 138 1.479323 CTAGTGGGCGCTTAGGTGTTA 59.521 52.381 7.64 0.00 0.00 2.41
139 140 1.614241 CCTAGTGGGCGCTTAGGTGT 61.614 60.000 7.64 0.00 0.00 4.16
142 143 0.755698 TCTCCTAGTGGGCGCTTAGG 60.756 60.000 19.20 19.20 34.39 2.69
143 144 0.671251 CTCTCCTAGTGGGCGCTTAG 59.329 60.000 7.64 4.66 34.39 2.18
144 145 1.392710 GCTCTCCTAGTGGGCGCTTA 61.393 60.000 7.64 0.00 34.39 3.09
145 146 2.726351 GCTCTCCTAGTGGGCGCTT 61.726 63.158 7.64 0.00 34.39 4.68
146 147 3.151022 GCTCTCCTAGTGGGCGCT 61.151 66.667 7.64 0.00 34.39 5.92
147 148 4.577246 CGCTCTCCTAGTGGGCGC 62.577 72.222 13.03 0.00 39.42 6.53
148 149 2.829003 TCGCTCTCCTAGTGGGCG 60.829 66.667 17.69 17.69 45.93 6.13
149 150 2.787567 GGTCGCTCTCCTAGTGGGC 61.788 68.421 0.00 0.00 36.31 5.36
150 151 1.379977 TGGTCGCTCTCCTAGTGGG 60.380 63.158 0.00 0.00 36.31 4.61
151 152 0.681564 AGTGGTCGCTCTCCTAGTGG 60.682 60.000 0.00 0.00 36.31 4.00
152 153 1.944024 CTAGTGGTCGCTCTCCTAGTG 59.056 57.143 0.00 0.00 37.03 2.74
159 160 2.716017 GCTGCCTAGTGGTCGCTCT 61.716 63.158 0.00 0.00 35.27 4.09
162 163 2.507110 TTCTGCTGCCTAGTGGTCGC 62.507 60.000 0.00 0.00 35.27 5.19
163 164 0.176680 ATTCTGCTGCCTAGTGGTCG 59.823 55.000 0.00 0.00 35.27 4.79
198 208 1.807573 GCGTTCCTTCGAGCTGAGG 60.808 63.158 0.00 0.00 0.00 3.86
283 299 2.344203 CGCCGTCTCAGGTTCCTCT 61.344 63.158 0.00 0.00 0.00 3.69
325 345 3.781770 GATCCTGCTCCGCCACTCG 62.782 68.421 0.00 0.00 38.08 4.18
692 724 2.158900 CCCAGTTCACAGCCCATAGTAG 60.159 54.545 0.00 0.00 0.00 2.57
716 844 1.000771 TCAGACTCGGCCTGCTACT 60.001 57.895 0.00 0.00 0.00 2.57
727 855 0.321122 CTGGGCCTTGTGTCAGACTC 60.321 60.000 4.53 0.00 0.00 3.36
735 863 3.357079 GTCGTGCTGGGCCTTGTG 61.357 66.667 4.53 0.00 0.00 3.33
737 865 2.594303 TTGTCGTGCTGGGCCTTG 60.594 61.111 4.53 0.00 0.00 3.61
780 919 2.613595 GCCAGCAAAAGAAAACCAAAGG 59.386 45.455 0.00 0.00 0.00 3.11
881 1024 3.916544 CTAGCGGATGAGGGCGCA 61.917 66.667 10.83 0.00 0.00 6.09
891 1034 4.182693 TCGATTTGAAGTTTCTAGCGGA 57.817 40.909 0.00 0.00 0.00 5.54
911 1056 4.847444 GGGAGCGGCTGGAGCTTC 62.847 72.222 7.50 0.00 46.13 3.86
949 1104 0.321298 GGCGAAACCTAGCAAGTCCA 60.321 55.000 0.00 0.00 34.51 4.02
950 1105 2.467962 GGCGAAACCTAGCAAGTCC 58.532 57.895 0.00 0.00 34.51 3.85
994 1149 4.101448 GTGGCTGCTCATCCCGGT 62.101 66.667 0.00 0.00 0.00 5.28
1168 1323 2.462782 CGTCGTCCTCGTCCTCCTC 61.463 68.421 0.00 0.00 38.33 3.71
1169 1324 2.436292 CGTCGTCCTCGTCCTCCT 60.436 66.667 0.00 0.00 38.33 3.69
1170 1325 4.176851 GCGTCGTCCTCGTCCTCC 62.177 72.222 0.00 0.00 38.33 4.30
1347 1514 4.365111 TTGGATGGCTTGGGCGCT 62.365 61.111 7.64 0.00 39.81 5.92
1359 1526 1.684248 GCATGGCTCTGGAAGTTGGAT 60.684 52.381 0.00 0.00 33.76 3.41
1464 1631 3.036959 GGAGGAGGGGGAGGAGGA 61.037 72.222 0.00 0.00 0.00 3.71
1549 1716 0.605589 GGAAGTGCTTTACCGGCAGT 60.606 55.000 0.00 0.00 44.08 4.40
1569 1736 4.988598 ACAACCACTGGCTCCGCG 62.989 66.667 0.00 0.00 0.00 6.46
1617 1784 0.181114 GTGATGGTCCTATGCTGGCA 59.819 55.000 0.00 0.00 0.00 4.92
1666 1833 2.208431 CGCCTCCACTTCAGAATCATC 58.792 52.381 0.00 0.00 0.00 2.92
1679 1846 2.142761 CCATCATCCTCCGCCTCCA 61.143 63.158 0.00 0.00 0.00 3.86
1698 1865 1.133945 GGCCCTTTCTCCTCATCTTCC 60.134 57.143 0.00 0.00 0.00 3.46
1719 1886 2.678324 GTCGCCTTATCAGGTATCAGC 58.322 52.381 0.00 0.00 43.18 4.26
1929 2096 2.557920 ACACTCCTTTTGAGCTCCTG 57.442 50.000 12.15 0.00 45.61 3.86
2070 2237 0.385390 CAAGCGCCTTTTTGACCTGT 59.615 50.000 2.29 0.00 0.00 4.00
2169 2336 1.203075 GGACCTCCCGAGTATCCAGAT 60.203 57.143 7.18 0.00 33.97 2.90
2175 2342 2.777459 AATGAGGACCTCCCGAGTAT 57.223 50.000 19.11 1.41 40.87 2.12
2184 2351 2.334023 GAGGGCTGATAATGAGGACCT 58.666 52.381 0.00 0.00 0.00 3.85
2385 2552 2.422832 CAGGCTGGAAATCTCTGAAAGC 59.577 50.000 6.61 0.00 0.00 3.51
2445 2612 1.817099 GTTCCGGAGCTCCTGCATG 60.817 63.158 29.73 14.03 42.74 4.06
2547 2714 1.244019 AAACAGCCAGTGCCCGATTC 61.244 55.000 0.00 0.00 38.69 2.52
2601 2768 3.567797 GCAGCTTCGATCACGCCC 61.568 66.667 0.00 0.00 39.58 6.13
2604 2771 2.507102 ACCGCAGCTTCGATCACG 60.507 61.111 7.52 0.00 41.26 4.35
2610 2777 3.782244 GCACTCACCGCAGCTTCG 61.782 66.667 0.00 0.00 0.00 3.79
2655 2822 1.338579 GCAGACAGGTTAGCTGAGCTT 60.339 52.381 14.14 0.00 40.44 3.74
2667 2834 2.435410 TGCGATGCAGCAGACAGG 60.435 61.111 1.53 0.00 42.92 4.00
2793 2960 0.988063 GCCTCCTGTTCTCTTCCCTT 59.012 55.000 0.00 0.00 0.00 3.95
3207 3374 3.671740 AGATCAGTAGGGTCAGCACTA 57.328 47.619 0.00 0.00 0.00 2.74
3221 3388 7.287512 TGAATGAGGTTCAGATCTAGATCAG 57.712 40.000 29.83 23.49 41.79 2.90
3264 3431 3.650950 TGCAGGACAGGAAGGGCC 61.651 66.667 0.00 0.00 0.00 5.80
3310 3477 2.032204 GCTGTGTTCTTTGAGTGCTCAG 60.032 50.000 1.98 0.00 41.13 3.35
3330 3497 3.498927 AAAGTTGCATCTACAGCATGC 57.501 42.857 10.51 10.51 45.92 4.06
3405 3572 1.800586 GTCAGACGACTACACACCGTA 59.199 52.381 0.00 0.00 39.22 4.02
3456 3623 2.449464 CTTGTCAGCATTGATCCCCAA 58.551 47.619 0.00 0.00 39.41 4.12
3572 3739 1.815003 CAAGTTTCTCCAGGGCATCAC 59.185 52.381 0.00 0.00 0.00 3.06
3573 3740 1.887956 GCAAGTTTCTCCAGGGCATCA 60.888 52.381 0.00 0.00 0.00 3.07
3687 3854 2.289882 CCAGACTCCTGAAAGTGATGCA 60.290 50.000 0.00 0.00 43.02 3.96
3784 3951 4.056050 TCTTCTTCACTAACGCCTGAAAC 58.944 43.478 0.00 0.00 0.00 2.78
3945 4112 6.556212 TGCTTGTCGTCTTCAAACAAAAATA 58.444 32.000 0.00 0.00 32.89 1.40
3960 4127 2.481449 GGATATCGAACCTGCTTGTCGT 60.481 50.000 0.00 0.00 0.00 4.34
3963 4130 3.452627 AGAAGGATATCGAACCTGCTTGT 59.547 43.478 10.25 2.02 38.93 3.16
3984 4151 1.604604 ACAACATTCCCGTGAACCAG 58.395 50.000 0.00 0.00 32.13 4.00
4157 4344 5.710513 ATGCAGAAAAGTGCTGAACATAA 57.289 34.783 0.00 0.00 44.32 1.90
4190 4380 6.432162 AGCAAGCTTTCATGAAAGATGTCTAA 59.568 34.615 39.75 10.84 45.13 2.10
4192 4382 4.765856 AGCAAGCTTTCATGAAAGATGTCT 59.234 37.500 39.75 31.00 45.13 3.41
4219 4409 6.723298 ATGGTCCAAAACTTCATAACACAA 57.277 33.333 0.00 0.00 0.00 3.33
4286 4477 7.512992 AGCTGGCTTATCAAACTATATCAAGT 58.487 34.615 0.00 0.00 0.00 3.16
4326 4517 2.353704 CCACCGCTCATGTCTGAAAGTA 60.354 50.000 0.00 0.00 33.76 2.24
4343 4535 4.706842 TCCTTAAATGCTAGGATCCACC 57.293 45.455 15.82 1.73 35.66 4.61
4361 4559 4.383335 CCATTGCACATAAAGCCATTTCCT 60.383 41.667 0.00 0.00 0.00 3.36
4378 4576 0.029834 ATGCGAGCGATTTCCATTGC 59.970 50.000 0.00 0.00 39.89 3.56
4379 4577 1.750351 CATGCGAGCGATTTCCATTG 58.250 50.000 0.00 0.00 0.00 2.82
4380 4578 0.029834 GCATGCGAGCGATTTCCATT 59.970 50.000 0.00 0.00 0.00 3.16
4381 4579 0.816825 AGCATGCGAGCGATTTCCAT 60.817 50.000 13.01 0.00 40.15 3.41
4382 4580 0.179086 TAGCATGCGAGCGATTTCCA 60.179 50.000 13.01 0.00 40.15 3.53
4383 4581 0.510359 CTAGCATGCGAGCGATTTCC 59.490 55.000 15.11 0.00 40.15 3.13
4384 4582 0.510359 CCTAGCATGCGAGCGATTTC 59.490 55.000 21.14 0.00 40.15 2.17
4385 4583 0.179073 ACCTAGCATGCGAGCGATTT 60.179 50.000 21.14 0.00 40.15 2.17
4386 4584 0.877649 CACCTAGCATGCGAGCGATT 60.878 55.000 21.14 0.17 40.15 3.34
4387 4585 1.300465 CACCTAGCATGCGAGCGAT 60.300 57.895 21.14 6.93 40.15 4.58
4388 4586 2.104928 CACCTAGCATGCGAGCGA 59.895 61.111 21.14 1.09 40.15 4.93
4389 4587 2.202797 ACACCTAGCATGCGAGCG 60.203 61.111 21.14 16.04 40.15 5.03
4390 4588 1.150567 CTCACACCTAGCATGCGAGC 61.151 60.000 21.14 0.00 0.00 5.03
4391 4589 0.529337 CCTCACACCTAGCATGCGAG 60.529 60.000 19.80 19.80 0.00 5.03
4392 4590 1.257750 ACCTCACACCTAGCATGCGA 61.258 55.000 13.01 6.11 0.00 5.10
4393 4591 0.391661 AACCTCACACCTAGCATGCG 60.392 55.000 13.01 0.00 0.00 4.73
4394 4592 1.089920 CAACCTCACACCTAGCATGC 58.910 55.000 10.51 10.51 0.00 4.06
4395 4593 1.003580 ACCAACCTCACACCTAGCATG 59.996 52.381 0.00 0.00 0.00 4.06
4396 4594 1.279271 GACCAACCTCACACCTAGCAT 59.721 52.381 0.00 0.00 0.00 3.79
4397 4595 0.685097 GACCAACCTCACACCTAGCA 59.315 55.000 0.00 0.00 0.00 3.49
4398 4596 0.977395 AGACCAACCTCACACCTAGC 59.023 55.000 0.00 0.00 0.00 3.42
4399 4597 3.432378 ACTAGACCAACCTCACACCTAG 58.568 50.000 0.00 0.00 0.00 3.02
4400 4598 3.537795 ACTAGACCAACCTCACACCTA 57.462 47.619 0.00 0.00 0.00 3.08
4401 4599 2.400467 ACTAGACCAACCTCACACCT 57.600 50.000 0.00 0.00 0.00 4.00
4402 4600 4.040095 AGTTTACTAGACCAACCTCACACC 59.960 45.833 0.00 0.00 0.00 4.16
4403 4601 5.211174 AGTTTACTAGACCAACCTCACAC 57.789 43.478 0.00 0.00 0.00 3.82
4404 4602 5.881923 AAGTTTACTAGACCAACCTCACA 57.118 39.130 0.00 0.00 0.00 3.58
4405 4603 8.843885 AAATAAGTTTACTAGACCAACCTCAC 57.156 34.615 0.00 0.00 0.00 3.51
4424 4622 8.981647 AGAACAAAAGCATGCAACTTAAATAAG 58.018 29.630 21.98 0.00 39.18 1.73
4425 4623 8.885494 AGAACAAAAGCATGCAACTTAAATAA 57.115 26.923 21.98 0.00 0.00 1.40
4426 4624 9.624697 CTAGAACAAAAGCATGCAACTTAAATA 57.375 29.630 21.98 3.61 0.00 1.40
4427 4625 8.359642 TCTAGAACAAAAGCATGCAACTTAAAT 58.640 29.630 21.98 2.51 0.00 1.40
4428 4626 7.711846 TCTAGAACAAAAGCATGCAACTTAAA 58.288 30.769 21.98 0.00 0.00 1.52
4429 4627 7.270757 TCTAGAACAAAAGCATGCAACTTAA 57.729 32.000 21.98 0.00 0.00 1.85
4430 4628 6.875948 TCTAGAACAAAAGCATGCAACTTA 57.124 33.333 21.98 0.52 0.00 2.24
4431 4629 5.772825 TCTAGAACAAAAGCATGCAACTT 57.227 34.783 21.98 7.18 0.00 2.66
4432 4630 5.772825 TTCTAGAACAAAAGCATGCAACT 57.227 34.783 21.98 9.92 0.00 3.16
4433 4631 6.385033 AGATTCTAGAACAAAAGCATGCAAC 58.615 36.000 21.98 2.79 0.00 4.17
4434 4632 6.579666 AGATTCTAGAACAAAAGCATGCAA 57.420 33.333 21.98 0.32 0.00 4.08
4435 4633 7.065085 GTCTAGATTCTAGAACAAAAGCATGCA 59.935 37.037 22.03 0.00 0.00 3.96
4436 4634 7.065085 TGTCTAGATTCTAGAACAAAAGCATGC 59.935 37.037 22.03 10.51 0.00 4.06
4437 4635 8.484641 TGTCTAGATTCTAGAACAAAAGCATG 57.515 34.615 22.03 0.00 0.00 4.06
4438 4636 9.678260 AATGTCTAGATTCTAGAACAAAAGCAT 57.322 29.630 22.03 16.23 0.00 3.79
4439 4637 8.939929 CAATGTCTAGATTCTAGAACAAAAGCA 58.060 33.333 22.03 14.95 0.00 3.91
4440 4638 9.155975 TCAATGTCTAGATTCTAGAACAAAAGC 57.844 33.333 22.03 10.52 0.00 3.51
4451 4649 9.491675 CAGAGCAATAATCAATGTCTAGATTCT 57.508 33.333 0.00 0.00 36.07 2.40
4452 4650 9.270640 ACAGAGCAATAATCAATGTCTAGATTC 57.729 33.333 0.00 0.00 36.07 2.52
4453 4651 9.053840 CACAGAGCAATAATCAATGTCTAGATT 57.946 33.333 0.00 0.00 38.05 2.40
4454 4652 8.427276 TCACAGAGCAATAATCAATGTCTAGAT 58.573 33.333 0.00 0.00 0.00 1.98
4455 4653 7.708322 GTCACAGAGCAATAATCAATGTCTAGA 59.292 37.037 0.00 0.00 0.00 2.43
4456 4654 7.710044 AGTCACAGAGCAATAATCAATGTCTAG 59.290 37.037 0.00 0.00 0.00 2.43
4457 4655 7.559486 AGTCACAGAGCAATAATCAATGTCTA 58.441 34.615 0.00 0.00 0.00 2.59
4458 4656 6.413052 AGTCACAGAGCAATAATCAATGTCT 58.587 36.000 0.00 0.00 0.00 3.41
4459 4657 6.674694 AGTCACAGAGCAATAATCAATGTC 57.325 37.500 0.00 0.00 0.00 3.06
4460 4658 8.618677 CATAAGTCACAGAGCAATAATCAATGT 58.381 33.333 0.00 0.00 0.00 2.71
4461 4659 8.618677 ACATAAGTCACAGAGCAATAATCAATG 58.381 33.333 0.00 0.00 0.00 2.82
4462 4660 8.743085 ACATAAGTCACAGAGCAATAATCAAT 57.257 30.769 0.00 0.00 0.00 2.57
4463 4661 9.317936 CTACATAAGTCACAGAGCAATAATCAA 57.682 33.333 0.00 0.00 0.00 2.57
4464 4662 8.695456 TCTACATAAGTCACAGAGCAATAATCA 58.305 33.333 0.00 0.00 0.00 2.57
4465 4663 9.703892 ATCTACATAAGTCACAGAGCAATAATC 57.296 33.333 0.00 0.00 0.00 1.75
4469 4667 8.864087 TGATATCTACATAAGTCACAGAGCAAT 58.136 33.333 3.98 0.00 0.00 3.56
4470 4668 8.237811 TGATATCTACATAAGTCACAGAGCAA 57.762 34.615 3.98 0.00 0.00 3.91
4471 4669 7.823745 TGATATCTACATAAGTCACAGAGCA 57.176 36.000 3.98 0.00 0.00 4.26
4472 4670 8.739039 AGATGATATCTACATAAGTCACAGAGC 58.261 37.037 3.98 0.00 38.00 4.09
4540 4738 8.706521 GGAGGGAGTAGTATATTTCTCTTGTTT 58.293 37.037 2.65 0.00 0.00 2.83
4541 4739 7.014422 CGGAGGGAGTAGTATATTTCTCTTGTT 59.986 40.741 2.65 0.00 0.00 2.83
4542 4740 6.490721 CGGAGGGAGTAGTATATTTCTCTTGT 59.509 42.308 2.65 0.00 0.00 3.16
4543 4741 6.490721 ACGGAGGGAGTAGTATATTTCTCTTG 59.509 42.308 2.65 0.00 0.00 3.02
4544 4742 6.612741 ACGGAGGGAGTAGTATATTTCTCTT 58.387 40.000 2.65 0.00 0.00 2.85
4545 4743 6.203526 ACGGAGGGAGTAGTATATTTCTCT 57.796 41.667 2.65 0.00 0.00 3.10
4546 4744 5.415389 GGACGGAGGGAGTAGTATATTTCTC 59.585 48.000 0.00 0.00 0.00 2.87
4547 4745 5.323581 GGACGGAGGGAGTAGTATATTTCT 58.676 45.833 0.00 0.00 0.00 2.52
4548 4746 4.155644 CGGACGGAGGGAGTAGTATATTTC 59.844 50.000 0.00 0.00 0.00 2.17
4549 4747 4.077822 CGGACGGAGGGAGTAGTATATTT 58.922 47.826 0.00 0.00 0.00 1.40
4550 4748 3.560882 CCGGACGGAGGGAGTAGTATATT 60.561 52.174 4.40 0.00 37.50 1.28
4551 4749 2.026449 CCGGACGGAGGGAGTAGTATAT 60.026 54.545 4.40 0.00 37.50 0.86
4552 4750 1.349026 CCGGACGGAGGGAGTAGTATA 59.651 57.143 4.40 0.00 37.50 1.47
4553 4751 0.110104 CCGGACGGAGGGAGTAGTAT 59.890 60.000 4.40 0.00 37.50 2.12
4554 4752 0.982852 TCCGGACGGAGGGAGTAGTA 60.983 60.000 9.76 0.00 39.76 1.82
4555 4753 1.856539 TTCCGGACGGAGGGAGTAGT 61.857 60.000 13.64 0.00 46.06 2.73
4556 4754 0.467659 ATTCCGGACGGAGGGAGTAG 60.468 60.000 13.64 0.00 46.06 2.57
4557 4755 0.032813 AATTCCGGACGGAGGGAGTA 60.033 55.000 13.64 0.00 46.06 2.59
4558 4756 0.908180 AAATTCCGGACGGAGGGAGT 60.908 55.000 13.64 0.00 46.06 3.85
4559 4757 0.252197 AAAATTCCGGACGGAGGGAG 59.748 55.000 13.64 0.00 46.06 4.30
4560 4758 1.570803 TAAAATTCCGGACGGAGGGA 58.429 50.000 13.64 0.00 46.06 4.20
4561 4759 2.406596 TTAAAATTCCGGACGGAGGG 57.593 50.000 13.64 0.00 46.06 4.30
4562 4760 3.075884 TGTTTAAAATTCCGGACGGAGG 58.924 45.455 13.64 0.00 46.06 4.30
4563 4761 3.423907 CGTGTTTAAAATTCCGGACGGAG 60.424 47.826 13.64 0.00 46.06 4.63
4564 4762 2.479656 CGTGTTTAAAATTCCGGACGGA 59.520 45.455 1.83 9.76 43.52 4.69
4565 4763 2.223845 ACGTGTTTAAAATTCCGGACGG 59.776 45.455 1.83 3.96 0.00 4.79
4566 4764 3.184986 AGACGTGTTTAAAATTCCGGACG 59.815 43.478 1.83 3.07 0.00 4.79
4567 4765 4.737353 AGACGTGTTTAAAATTCCGGAC 57.263 40.909 1.83 0.00 0.00 4.79
4568 4766 5.782047 TCTAGACGTGTTTAAAATTCCGGA 58.218 37.500 0.00 0.00 0.00 5.14
4569 4767 6.657836 ATCTAGACGTGTTTAAAATTCCGG 57.342 37.500 0.00 0.00 0.00 5.14
4570 4768 8.176814 TGTATCTAGACGTGTTTAAAATTCCG 57.823 34.615 0.00 0.00 0.00 4.30
4573 4771 9.661563 TGGATGTATCTAGACGTGTTTAAAATT 57.338 29.630 0.00 0.00 0.00 1.82
4574 4772 9.832445 ATGGATGTATCTAGACGTGTTTAAAAT 57.168 29.630 0.00 0.00 0.00 1.82
4575 4773 9.661563 AATGGATGTATCTAGACGTGTTTAAAA 57.338 29.630 0.00 0.00 0.00 1.52
4576 4774 9.661563 AAATGGATGTATCTAGACGTGTTTAAA 57.338 29.630 0.00 0.00 0.00 1.52
4577 4775 9.309516 GAAATGGATGTATCTAGACGTGTTTAA 57.690 33.333 0.00 0.00 0.00 1.52
4578 4776 8.692710 AGAAATGGATGTATCTAGACGTGTTTA 58.307 33.333 0.00 0.00 0.00 2.01
4579 4777 7.492669 CAGAAATGGATGTATCTAGACGTGTTT 59.507 37.037 0.00 0.00 0.00 2.83
4580 4778 6.980978 CAGAAATGGATGTATCTAGACGTGTT 59.019 38.462 0.00 0.00 0.00 3.32
4581 4779 6.507900 CAGAAATGGATGTATCTAGACGTGT 58.492 40.000 0.00 0.00 0.00 4.49
4582 4780 5.403766 GCAGAAATGGATGTATCTAGACGTG 59.596 44.000 0.00 0.00 0.00 4.49
4583 4781 5.533482 GCAGAAATGGATGTATCTAGACGT 58.467 41.667 0.00 0.00 0.00 4.34
4584 4782 4.618912 CGCAGAAATGGATGTATCTAGACG 59.381 45.833 0.00 0.00 0.00 4.18
4585 4783 5.631512 GTCGCAGAAATGGATGTATCTAGAC 59.368 44.000 0.00 0.00 39.69 2.59
4586 4784 5.301805 TGTCGCAGAAATGGATGTATCTAGA 59.698 40.000 0.00 0.00 39.69 2.43
4587 4785 5.532557 TGTCGCAGAAATGGATGTATCTAG 58.467 41.667 0.00 0.00 39.69 2.43
4588 4786 5.529581 TGTCGCAGAAATGGATGTATCTA 57.470 39.130 0.00 0.00 39.69 1.98
4589 4787 4.406648 TGTCGCAGAAATGGATGTATCT 57.593 40.909 0.00 0.00 39.69 1.98
4590 4788 4.572389 ACTTGTCGCAGAAATGGATGTATC 59.428 41.667 0.00 0.00 39.69 2.24
4591 4789 4.517285 ACTTGTCGCAGAAATGGATGTAT 58.483 39.130 0.00 0.00 39.69 2.29
4592 4790 3.937814 ACTTGTCGCAGAAATGGATGTA 58.062 40.909 0.00 0.00 39.69 2.29
4593 4791 2.783135 ACTTGTCGCAGAAATGGATGT 58.217 42.857 0.00 0.00 39.69 3.06
4594 4792 4.944962 TTACTTGTCGCAGAAATGGATG 57.055 40.909 0.00 0.00 39.69 3.51
4595 4793 5.220662 CGAATTACTTGTCGCAGAAATGGAT 60.221 40.000 0.00 0.00 39.69 3.41
4596 4794 4.092821 CGAATTACTTGTCGCAGAAATGGA 59.907 41.667 0.00 0.00 39.69 3.41
4597 4795 4.334443 CGAATTACTTGTCGCAGAAATGG 58.666 43.478 0.00 0.00 39.69 3.16
4598 4796 4.334443 CCGAATTACTTGTCGCAGAAATG 58.666 43.478 0.00 0.00 39.69 2.32
4599 4797 3.181510 GCCGAATTACTTGTCGCAGAAAT 60.182 43.478 0.00 0.00 39.69 2.17
4600 4798 2.158841 GCCGAATTACTTGTCGCAGAAA 59.841 45.455 0.00 0.00 39.69 2.52
4601 4799 1.730064 GCCGAATTACTTGTCGCAGAA 59.270 47.619 0.00 0.00 39.69 3.02
4602 4800 1.337354 TGCCGAATTACTTGTCGCAGA 60.337 47.619 0.00 0.00 35.93 4.26
4603 4801 1.075542 TGCCGAATTACTTGTCGCAG 58.924 50.000 0.00 0.00 35.93 5.18
4604 4802 0.793861 GTGCCGAATTACTTGTCGCA 59.206 50.000 0.00 0.00 35.93 5.10
4605 4803 0.247145 CGTGCCGAATTACTTGTCGC 60.247 55.000 0.00 0.00 35.93 5.19
4606 4804 0.368907 CCGTGCCGAATTACTTGTCG 59.631 55.000 0.00 0.00 37.01 4.35
4607 4805 1.717194 TCCGTGCCGAATTACTTGTC 58.283 50.000 0.00 0.00 0.00 3.18
4608 4806 2.006888 CATCCGTGCCGAATTACTTGT 58.993 47.619 0.00 0.00 0.00 3.16
4609 4807 1.330521 CCATCCGTGCCGAATTACTTG 59.669 52.381 0.00 0.00 0.00 3.16
4610 4808 1.208535 TCCATCCGTGCCGAATTACTT 59.791 47.619 0.00 0.00 0.00 2.24
4611 4809 0.828022 TCCATCCGTGCCGAATTACT 59.172 50.000 0.00 0.00 0.00 2.24
4612 4810 1.217882 CTCCATCCGTGCCGAATTAC 58.782 55.000 0.00 0.00 0.00 1.89
4613 4811 0.828022 ACTCCATCCGTGCCGAATTA 59.172 50.000 0.00 0.00 0.00 1.40
4614 4812 0.828022 TACTCCATCCGTGCCGAATT 59.172 50.000 0.00 0.00 0.00 2.17
4615 4813 1.048601 ATACTCCATCCGTGCCGAAT 58.951 50.000 0.00 0.00 0.00 3.34
4616 4814 0.828022 AATACTCCATCCGTGCCGAA 59.172 50.000 0.00 0.00 0.00 4.30
4617 4815 1.694844 TAATACTCCATCCGTGCCGA 58.305 50.000 0.00 0.00 0.00 5.54
4618 4816 2.743636 ATAATACTCCATCCGTGCCG 57.256 50.000 0.00 0.00 0.00 5.69
4619 4817 5.599999 AGATATAATACTCCATCCGTGCC 57.400 43.478 0.00 0.00 0.00 5.01
4620 4818 8.634444 AGATTAGATATAATACTCCATCCGTGC 58.366 37.037 0.00 0.00 0.00 5.34
4662 4860 9.574516 AAGTGAAATTCTTGACTAACCATAACT 57.425 29.630 0.00 0.00 27.87 2.24
4670 4868 9.744468 GCCTTAAAAAGTGAAATTCTTGACTAA 57.256 29.630 0.00 0.00 27.87 2.24
4671 4869 8.908903 TGCCTTAAAAAGTGAAATTCTTGACTA 58.091 29.630 0.00 0.00 27.87 2.59
4672 4870 7.781056 TGCCTTAAAAAGTGAAATTCTTGACT 58.219 30.769 0.00 0.00 29.21 3.41
4673 4871 7.706607 ACTGCCTTAAAAAGTGAAATTCTTGAC 59.293 33.333 0.00 0.00 0.00 3.18
4674 4872 7.781056 ACTGCCTTAAAAAGTGAAATTCTTGA 58.219 30.769 0.00 0.00 0.00 3.02
4675 4873 9.696917 ATACTGCCTTAAAAAGTGAAATTCTTG 57.303 29.630 0.00 0.00 0.00 3.02
4676 4874 9.696917 CATACTGCCTTAAAAAGTGAAATTCTT 57.303 29.630 0.00 0.00 0.00 2.52
4677 4875 8.860088 ACATACTGCCTTAAAAAGTGAAATTCT 58.140 29.630 0.00 0.00 0.00 2.40
4678 4876 9.476202 AACATACTGCCTTAAAAAGTGAAATTC 57.524 29.630 0.00 0.00 0.00 2.17
4679 4877 9.476202 GAACATACTGCCTTAAAAAGTGAAATT 57.524 29.630 0.00 0.00 0.00 1.82
4680 4878 8.860088 AGAACATACTGCCTTAAAAAGTGAAAT 58.140 29.630 0.00 0.00 0.00 2.17
4681 4879 8.232913 AGAACATACTGCCTTAAAAAGTGAAA 57.767 30.769 0.00 0.00 0.00 2.69
4682 4880 7.817418 AGAACATACTGCCTTAAAAAGTGAA 57.183 32.000 0.00 0.00 0.00 3.18
4683 4881 8.372459 TCTAGAACATACTGCCTTAAAAAGTGA 58.628 33.333 0.00 0.00 0.00 3.41
4684 4882 8.547967 TCTAGAACATACTGCCTTAAAAAGTG 57.452 34.615 0.00 0.00 0.00 3.16
4685 4883 9.384764 GATCTAGAACATACTGCCTTAAAAAGT 57.615 33.333 0.00 0.00 0.00 2.66
4686 4884 8.831550 GGATCTAGAACATACTGCCTTAAAAAG 58.168 37.037 0.00 0.00 0.00 2.27
4687 4885 7.773690 GGGATCTAGAACATACTGCCTTAAAAA 59.226 37.037 0.00 0.00 0.00 1.94
4688 4886 7.127339 AGGGATCTAGAACATACTGCCTTAAAA 59.873 37.037 0.00 0.00 0.00 1.52
4689 4887 6.615726 AGGGATCTAGAACATACTGCCTTAAA 59.384 38.462 0.00 0.00 0.00 1.52
4690 4888 6.143915 AGGGATCTAGAACATACTGCCTTAA 58.856 40.000 0.00 0.00 0.00 1.85
4691 4889 5.716979 AGGGATCTAGAACATACTGCCTTA 58.283 41.667 0.00 0.00 0.00 2.69
4692 4890 4.561752 AGGGATCTAGAACATACTGCCTT 58.438 43.478 0.00 0.00 0.00 4.35
4693 4891 4.206244 AGGGATCTAGAACATACTGCCT 57.794 45.455 0.00 0.00 0.00 4.75
4694 4892 4.965200 AAGGGATCTAGAACATACTGCC 57.035 45.455 0.00 0.00 0.00 4.85
4695 4893 5.918608 TGAAAGGGATCTAGAACATACTGC 58.081 41.667 0.00 0.00 0.00 4.40
4696 4894 7.118496 ACTGAAAGGGATCTAGAACATACTG 57.882 40.000 0.00 0.00 39.30 2.74
4697 4895 7.741554 AACTGAAAGGGATCTAGAACATACT 57.258 36.000 0.00 0.00 39.30 2.12
4698 4896 9.315525 GTAAACTGAAAGGGATCTAGAACATAC 57.684 37.037 0.00 0.00 39.30 2.39
4699 4897 9.042450 TGTAAACTGAAAGGGATCTAGAACATA 57.958 33.333 0.00 0.00 39.30 2.29
4700 4898 7.918076 TGTAAACTGAAAGGGATCTAGAACAT 58.082 34.615 0.00 0.00 39.30 2.71
4701 4899 7.311092 TGTAAACTGAAAGGGATCTAGAACA 57.689 36.000 0.00 0.00 39.30 3.18
4702 4900 8.617290 TTTGTAAACTGAAAGGGATCTAGAAC 57.383 34.615 0.00 0.00 39.30 3.01
4703 4901 9.635404 TTTTTGTAAACTGAAAGGGATCTAGAA 57.365 29.630 0.00 0.00 39.30 2.10
4704 4902 9.807921 ATTTTTGTAAACTGAAAGGGATCTAGA 57.192 29.630 0.00 0.00 39.30 2.43
4709 4907 9.942850 CCAATATTTTTGTAAACTGAAAGGGAT 57.057 29.630 0.00 0.00 39.30 3.85
4710 4908 9.148879 TCCAATATTTTTGTAAACTGAAAGGGA 57.851 29.630 0.00 0.00 39.30 4.20
4711 4909 9.771534 TTCCAATATTTTTGTAAACTGAAAGGG 57.228 29.630 0.00 0.00 39.30 3.95
4723 4921 9.811995 CATGATCAGATGTTCCAATATTTTTGT 57.188 29.630 0.09 0.00 0.00 2.83
4726 4924 9.417561 ACTCATGATCAGATGTTCCAATATTTT 57.582 29.630 0.09 0.00 0.00 1.82
4727 4925 8.991783 ACTCATGATCAGATGTTCCAATATTT 57.008 30.769 0.09 0.00 0.00 1.40
4728 4926 9.499479 GTACTCATGATCAGATGTTCCAATATT 57.501 33.333 0.09 0.00 0.00 1.28
4729 4927 8.099537 GGTACTCATGATCAGATGTTCCAATAT 58.900 37.037 0.09 0.00 0.00 1.28
4730 4928 7.290948 AGGTACTCATGATCAGATGTTCCAATA 59.709 37.037 16.59 0.00 0.00 1.90
4731 4929 6.100859 AGGTACTCATGATCAGATGTTCCAAT 59.899 38.462 16.59 2.15 0.00 3.16
4732 4930 5.426509 AGGTACTCATGATCAGATGTTCCAA 59.573 40.000 16.59 0.00 0.00 3.53
4733 4931 4.964897 AGGTACTCATGATCAGATGTTCCA 59.035 41.667 16.59 0.00 0.00 3.53
4734 4932 5.543507 AGGTACTCATGATCAGATGTTCC 57.456 43.478 0.09 6.89 0.00 3.62
4735 4933 7.283625 ACTAGGTACTCATGATCAGATGTTC 57.716 40.000 0.09 0.00 41.75 3.18
4736 4934 7.343057 TGAACTAGGTACTCATGATCAGATGTT 59.657 37.037 0.09 0.00 41.75 2.71
4737 4935 6.836007 TGAACTAGGTACTCATGATCAGATGT 59.164 38.462 0.09 2.16 41.75 3.06
4738 4936 7.282332 TGAACTAGGTACTCATGATCAGATG 57.718 40.000 0.09 0.00 41.75 2.90
4739 4937 7.904558 TTGAACTAGGTACTCATGATCAGAT 57.095 36.000 0.09 0.00 41.75 2.90
4740 4938 7.782168 AGATTGAACTAGGTACTCATGATCAGA 59.218 37.037 0.09 0.00 41.75 3.27
4741 4939 7.950512 AGATTGAACTAGGTACTCATGATCAG 58.049 38.462 0.09 0.00 41.75 2.90
4742 4940 7.904558 AGATTGAACTAGGTACTCATGATCA 57.095 36.000 0.00 0.00 41.75 2.92
4743 4941 7.170658 GCAAGATTGAACTAGGTACTCATGATC 59.829 40.741 0.00 0.00 41.75 2.92
4744 4942 6.989169 GCAAGATTGAACTAGGTACTCATGAT 59.011 38.462 0.00 0.00 41.75 2.45
4745 4943 6.070824 TGCAAGATTGAACTAGGTACTCATGA 60.071 38.462 0.00 0.00 41.75 3.07
4746 4944 6.108687 TGCAAGATTGAACTAGGTACTCATG 58.891 40.000 0.00 0.00 41.75 3.07
4747 4945 6.299805 TGCAAGATTGAACTAGGTACTCAT 57.700 37.500 0.00 0.00 41.75 2.90
4748 4946 5.738619 TGCAAGATTGAACTAGGTACTCA 57.261 39.130 0.00 0.00 41.75 3.41
4749 4947 5.007136 GCATGCAAGATTGAACTAGGTACTC 59.993 44.000 14.21 0.00 41.75 2.59
4750 4948 4.878397 GCATGCAAGATTGAACTAGGTACT 59.122 41.667 14.21 0.00 46.37 2.73
4751 4949 4.635765 TGCATGCAAGATTGAACTAGGTAC 59.364 41.667 20.30 0.00 0.00 3.34
4752 4950 4.842574 TGCATGCAAGATTGAACTAGGTA 58.157 39.130 20.30 0.00 0.00 3.08
4753 4951 3.689347 TGCATGCAAGATTGAACTAGGT 58.311 40.909 20.30 0.00 0.00 3.08
4754 4952 4.337274 TCATGCATGCAAGATTGAACTAGG 59.663 41.667 26.68 0.00 0.00 3.02
4755 4953 5.494632 TCATGCATGCAAGATTGAACTAG 57.505 39.130 26.68 3.26 0.00 2.57
4756 4954 5.591067 TCATCATGCATGCAAGATTGAACTA 59.409 36.000 30.32 14.03 32.87 2.24
4757 4955 4.401202 TCATCATGCATGCAAGATTGAACT 59.599 37.500 30.32 11.55 32.87 3.01
4758 4956 4.678622 TCATCATGCATGCAAGATTGAAC 58.321 39.130 30.32 0.00 32.87 3.18
4759 4957 4.993029 TCATCATGCATGCAAGATTGAA 57.007 36.364 30.32 18.30 32.87 2.69
4760 4958 6.127730 GGATATCATCATGCATGCAAGATTGA 60.128 38.462 30.32 27.55 32.87 2.57
4761 4959 6.036470 GGATATCATCATGCATGCAAGATTG 58.964 40.000 30.32 24.36 32.87 2.67
4762 4960 5.714806 TGGATATCATCATGCATGCAAGATT 59.285 36.000 30.32 21.27 32.87 2.40
4763 4961 5.261216 TGGATATCATCATGCATGCAAGAT 58.739 37.500 27.98 27.98 35.13 2.40
4764 4962 4.658063 TGGATATCATCATGCATGCAAGA 58.342 39.130 26.10 26.10 31.70 3.02
4765 4963 5.343249 CATGGATATCATCATGCATGCAAG 58.657 41.667 26.68 21.38 44.38 4.01
4766 4964 5.323371 CATGGATATCATCATGCATGCAA 57.677 39.130 26.68 9.94 44.38 4.08
4767 4965 4.981806 CATGGATATCATCATGCATGCA 57.018 40.909 25.04 25.04 44.38 3.96
4773 4971 7.536281 CGTTAAAACTGCATGGATATCATCATG 59.464 37.037 14.34 14.34 42.47 3.07
4774 4972 7.308770 CCGTTAAAACTGCATGGATATCATCAT 60.309 37.037 4.83 0.00 32.92 2.45
4775 4973 6.017192 CCGTTAAAACTGCATGGATATCATCA 60.017 38.462 4.83 0.00 32.92 3.07
4776 4974 6.017109 ACCGTTAAAACTGCATGGATATCATC 60.017 38.462 4.83 0.00 32.92 2.92
4777 4975 5.827797 ACCGTTAAAACTGCATGGATATCAT 59.172 36.000 4.83 0.00 36.31 2.45
4778 4976 5.189928 ACCGTTAAAACTGCATGGATATCA 58.810 37.500 4.83 0.00 0.00 2.15
4779 4977 5.527582 AGACCGTTAAAACTGCATGGATATC 59.472 40.000 0.00 0.00 0.00 1.63
4780 4978 5.437060 AGACCGTTAAAACTGCATGGATAT 58.563 37.500 0.00 0.00 0.00 1.63
4781 4979 4.839121 AGACCGTTAAAACTGCATGGATA 58.161 39.130 0.00 0.00 0.00 2.59
4782 4980 3.686016 AGACCGTTAAAACTGCATGGAT 58.314 40.909 0.00 0.00 0.00 3.41
4783 4981 3.134574 AGACCGTTAAAACTGCATGGA 57.865 42.857 0.00 0.00 0.00 3.41
4784 4982 3.502211 AGAAGACCGTTAAAACTGCATGG 59.498 43.478 0.00 0.00 0.00 3.66
4785 4983 4.749245 AGAAGACCGTTAAAACTGCATG 57.251 40.909 0.00 0.00 0.00 4.06
4786 4984 5.790593 TCTAGAAGACCGTTAAAACTGCAT 58.209 37.500 0.00 0.00 0.00 3.96
4787 4985 5.204409 TCTAGAAGACCGTTAAAACTGCA 57.796 39.130 0.00 0.00 0.00 4.41
4788 4986 6.723131 AATCTAGAAGACCGTTAAAACTGC 57.277 37.500 0.00 0.00 0.00 4.40
4789 4987 8.306680 TGAAATCTAGAAGACCGTTAAAACTG 57.693 34.615 0.00 0.00 0.00 3.16
4790 4988 8.148999 ACTGAAATCTAGAAGACCGTTAAAACT 58.851 33.333 0.00 0.00 0.00 2.66
4791 4989 8.307921 ACTGAAATCTAGAAGACCGTTAAAAC 57.692 34.615 0.00 0.00 0.00 2.43
4792 4990 9.985730 TTACTGAAATCTAGAAGACCGTTAAAA 57.014 29.630 0.00 0.00 0.00 1.52
4793 4991 9.985730 TTTACTGAAATCTAGAAGACCGTTAAA 57.014 29.630 0.00 0.00 0.00 1.52
4794 4992 9.985730 TTTTACTGAAATCTAGAAGACCGTTAA 57.014 29.630 0.00 0.00 0.00 2.01
4795 4993 9.985730 TTTTTACTGAAATCTAGAAGACCGTTA 57.014 29.630 0.00 0.00 0.00 3.18
4796 4994 8.897872 TTTTTACTGAAATCTAGAAGACCGTT 57.102 30.769 0.00 0.00 0.00 4.44
4797 4995 8.365647 TCTTTTTACTGAAATCTAGAAGACCGT 58.634 33.333 0.00 0.00 0.00 4.83
4798 4996 8.758633 TCTTTTTACTGAAATCTAGAAGACCG 57.241 34.615 0.00 0.00 0.00 4.79
4807 5005 9.559732 CCCCAATTTTTCTTTTTACTGAAATCT 57.440 29.630 0.00 0.00 33.04 2.40
4808 5006 9.337396 ACCCCAATTTTTCTTTTTACTGAAATC 57.663 29.630 0.00 0.00 33.04 2.17
4812 5010 9.771534 CATTACCCCAATTTTTCTTTTTACTGA 57.228 29.630 0.00 0.00 0.00 3.41
4813 5011 8.998377 CCATTACCCCAATTTTTCTTTTTACTG 58.002 33.333 0.00 0.00 0.00 2.74
4814 5012 7.663905 GCCATTACCCCAATTTTTCTTTTTACT 59.336 33.333 0.00 0.00 0.00 2.24
4815 5013 7.094549 GGCCATTACCCCAATTTTTCTTTTTAC 60.095 37.037 0.00 0.00 0.00 2.01
4816 5014 6.943146 GGCCATTACCCCAATTTTTCTTTTTA 59.057 34.615 0.00 0.00 0.00 1.52
4817 5015 5.772672 GGCCATTACCCCAATTTTTCTTTTT 59.227 36.000 0.00 0.00 0.00 1.94
4818 5016 5.163045 TGGCCATTACCCCAATTTTTCTTTT 60.163 36.000 0.00 0.00 0.00 2.27
4819 5017 4.352298 TGGCCATTACCCCAATTTTTCTTT 59.648 37.500 0.00 0.00 0.00 2.52
4820 5018 3.913163 TGGCCATTACCCCAATTTTTCTT 59.087 39.130 0.00 0.00 0.00 2.52
4821 5019 3.519107 CTGGCCATTACCCCAATTTTTCT 59.481 43.478 5.51 0.00 0.00 2.52
4822 5020 3.263170 ACTGGCCATTACCCCAATTTTTC 59.737 43.478 5.51 0.00 0.00 2.29
4823 5021 3.008923 CACTGGCCATTACCCCAATTTTT 59.991 43.478 5.51 0.00 0.00 1.94
4824 5022 2.571202 CACTGGCCATTACCCCAATTTT 59.429 45.455 5.51 0.00 0.00 1.82
4825 5023 2.187100 CACTGGCCATTACCCCAATTT 58.813 47.619 5.51 0.00 0.00 1.82
4826 5024 1.864669 CACTGGCCATTACCCCAATT 58.135 50.000 5.51 0.00 0.00 2.32
4827 5025 0.687427 GCACTGGCCATTACCCCAAT 60.687 55.000 5.51 0.00 0.00 3.16
4828 5026 1.304879 GCACTGGCCATTACCCCAA 60.305 57.895 5.51 0.00 0.00 4.12
4829 5027 2.358619 GCACTGGCCATTACCCCA 59.641 61.111 5.51 0.00 0.00 4.96
4839 5037 3.322514 TCAGTTAACTGGCACTGGC 57.677 52.632 30.35 0.00 43.91 4.85
4846 5044 5.811399 TGTGTTTTCAGTCAGTTAACTGG 57.189 39.130 30.35 17.44 45.47 4.00
4847 5045 8.064222 CAGTATGTGTTTTCAGTCAGTTAACTG 58.936 37.037 26.60 26.60 46.54 3.16
4848 5046 8.142994 CAGTATGTGTTTTCAGTCAGTTAACT 57.857 34.615 1.12 1.12 0.00 2.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.