Multiple sequence alignment - TraesCS5B01G536500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G536500 chr5B 100.000 6019 0 0 1 6019 692559858 692565876 0.000000e+00 11116.0
1 TraesCS5B01G536500 chr5D 89.040 4179 239 98 1721 5782 548351013 548355089 0.000000e+00 4977.0
2 TraesCS5B01G536500 chr5D 87.119 1312 78 28 3 1257 548349002 548350279 0.000000e+00 1402.0
3 TraesCS5B01G536500 chr5D 93.932 412 24 1 1255 1665 548350493 548350904 6.630000e-174 621.0
4 TraesCS5B01G536500 chr4A 91.416 1561 57 19 2431 3974 619186046 619187546 0.000000e+00 2069.0
5 TraesCS5B01G536500 chr4A 85.996 1778 117 68 4007 5732 619187539 619189236 0.000000e+00 1783.0
6 TraesCS5B01G536500 chr4A 87.143 1120 87 24 637 1718 619183994 619185094 0.000000e+00 1218.0
7 TraesCS5B01G536500 chr4A 93.986 715 36 7 1719 2432 619185158 619185866 0.000000e+00 1075.0
8 TraesCS5B01G536500 chr4A 82.653 588 34 23 1 561 619183331 619183877 5.500000e-125 459.0
9 TraesCS5B01G536500 chr3B 93.617 376 22 2 1719 2094 103247078 103247451 1.460000e-155 560.0
10 TraesCS5B01G536500 chr3B 75.676 370 53 16 1954 2304 131943682 131943331 3.760000e-32 150.0
11 TraesCS5B01G536500 chr2A 82.212 208 21 9 2109 2305 332147973 332147771 1.340000e-36 165.0
12 TraesCS5B01G536500 chr2B 77.903 267 33 16 2058 2305 198993713 198993454 6.290000e-30 143.0
13 TraesCS5B01G536500 chr6D 85.526 76 8 2 1094 1169 423441979 423442051 6.470000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G536500 chr5B 692559858 692565876 6018 False 11116.000000 11116 100.000000 1 6019 1 chr5B.!!$F1 6018
1 TraesCS5B01G536500 chr5D 548349002 548355089 6087 False 2333.333333 4977 90.030333 3 5782 3 chr5D.!!$F1 5779
2 TraesCS5B01G536500 chr4A 619183331 619189236 5905 False 1320.800000 2069 88.238800 1 5732 5 chr4A.!!$F1 5731

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
140 158 0.679960 AATTGCGGAGGGGCTAACAC 60.680 55.000 0.00 0.0 0.00 3.32 F
212 230 0.885196 TTGGTTGGCACCTAATTCGC 59.115 50.000 7.47 0.0 44.61 4.70 F
432 451 1.133199 TGGCCACTGTTCCATCCTTTT 60.133 47.619 0.00 0.0 0.00 2.27 F
1780 2178 1.179152 TTCATCTTACGTCGGCTGGA 58.821 50.000 0.00 0.0 0.00 3.86 F
2848 3455 1.600058 TCTGGCCAGAGGGAATGAAT 58.400 50.000 32.00 0.0 35.59 2.57 F
3616 4225 0.827368 ATCGAGCTCCCACTTCCTTC 59.173 55.000 8.47 0.0 0.00 3.46 F
4624 5279 0.107643 TCATGGTTCCGTGTTGCTCA 59.892 50.000 10.35 0.0 0.00 4.26 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1678 2007 2.623418 TCCCTGAGACACATGTAGGT 57.377 50.000 10.11 0.0 0.00 3.08 R
1807 2205 3.406764 ACCACAAGATGTTCAAGAGAGC 58.593 45.455 0.00 0.0 0.00 4.09 R
2249 2650 0.035439 AGCCCGGTACCTTGAACATG 60.035 55.000 10.90 0.0 0.00 3.21 R
3616 4225 0.396435 TGGTGGTGTTGCTCCTACAG 59.604 55.000 0.00 0.0 0.00 2.74 R
4376 5020 0.098728 GGTTGTGGTATGCGATGCAC 59.901 55.000 0.00 0.0 43.04 4.57 R
4958 5613 0.036010 ACCGCTTCTCCATCAGGTTG 60.036 55.000 0.00 0.0 35.89 3.77 R
5528 6247 0.390735 CTTCAATGCCCTTGCCTTGC 60.391 55.000 0.00 0.0 41.29 4.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 3.955429 CGTTCAATCGCTGTTCCTG 57.045 52.632 0.00 0.00 0.00 3.86
35 36 1.428448 CGTTCAATCGCTGTTCCTGA 58.572 50.000 0.00 0.00 0.00 3.86
36 37 2.002586 CGTTCAATCGCTGTTCCTGAT 58.997 47.619 0.00 0.00 0.00 2.90
37 38 2.029728 CGTTCAATCGCTGTTCCTGATC 59.970 50.000 0.00 0.00 0.00 2.92
38 39 3.265791 GTTCAATCGCTGTTCCTGATCT 58.734 45.455 0.00 0.00 0.00 2.75
39 40 4.433615 GTTCAATCGCTGTTCCTGATCTA 58.566 43.478 0.00 0.00 0.00 1.98
55 61 5.002464 TGATCTACTACGGGTTTGTTAGC 57.998 43.478 0.00 0.00 0.00 3.09
59 65 2.407090 ACTACGGGTTTGTTAGCGTTC 58.593 47.619 0.00 0.00 0.00 3.95
67 73 1.005294 TTGTTAGCGTTCGCCTCGTC 61.005 55.000 13.54 1.90 0.00 4.20
71 77 1.978712 TAGCGTTCGCCTCGTCTGAG 61.979 60.000 13.54 0.00 42.18 3.35
93 111 1.320344 GGCCTTCGGTTTGGGGATTC 61.320 60.000 0.00 0.00 0.00 2.52
97 115 3.138128 CGGTTTGGGGATTCCGCC 61.138 66.667 16.43 9.80 44.92 6.13
108 126 2.374877 GATTCCGCCGCGATTCAACC 62.375 60.000 15.93 0.00 0.00 3.77
140 158 0.679960 AATTGCGGAGGGGCTAACAC 60.680 55.000 0.00 0.00 0.00 3.32
155 173 2.038329 CACCCCTCCCCGTCTGTA 59.962 66.667 0.00 0.00 0.00 2.74
156 174 2.038490 ACCCCTCCCCGTCTGTAC 59.962 66.667 0.00 0.00 0.00 2.90
157 175 2.762875 CCCCTCCCCGTCTGTACC 60.763 72.222 0.00 0.00 0.00 3.34
201 219 2.866762 TGTTTTAAATGCGTTGGTTGGC 59.133 40.909 0.00 0.00 0.00 4.52
212 230 0.885196 TTGGTTGGCACCTAATTCGC 59.115 50.000 7.47 0.00 44.61 4.70
218 236 1.440145 GGCACCTAATTCGCAGCCTC 61.440 60.000 0.00 0.00 39.02 4.70
283 302 2.476051 GACTGTTCATGGCGCGTG 59.524 61.111 8.43 2.71 0.00 5.34
284 303 3.027170 GACTGTTCATGGCGCGTGG 62.027 63.158 8.43 0.00 0.00 4.94
285 304 3.049674 CTGTTCATGGCGCGTGGT 61.050 61.111 8.43 0.00 0.00 4.16
299 318 2.004733 GCGTGGTGGATTTGTAGTACC 58.995 52.381 0.00 0.00 0.00 3.34
300 319 2.624636 CGTGGTGGATTTGTAGTACCC 58.375 52.381 0.00 0.00 0.00 3.69
301 320 2.235402 CGTGGTGGATTTGTAGTACCCT 59.765 50.000 0.00 0.00 0.00 4.34
302 321 3.307199 CGTGGTGGATTTGTAGTACCCTT 60.307 47.826 0.00 0.00 0.00 3.95
303 322 4.259356 GTGGTGGATTTGTAGTACCCTTC 58.741 47.826 0.00 0.00 0.00 3.46
304 323 3.055675 TGGTGGATTTGTAGTACCCTTCG 60.056 47.826 0.00 0.00 0.00 3.79
305 324 3.528532 GTGGATTTGTAGTACCCTTCGG 58.471 50.000 0.00 0.00 0.00 4.30
351 370 7.014702 CCGCCATTATTTTGTTGATTTTGTTC 58.985 34.615 0.00 0.00 0.00 3.18
365 384 3.607422 TTTGTTCTGATTGAGTGCGTG 57.393 42.857 0.00 0.00 0.00 5.34
369 388 1.795768 TCTGATTGAGTGCGTGGTTC 58.204 50.000 0.00 0.00 0.00 3.62
404 423 1.135774 GGATCCGTTTCGCTTTTGTCC 60.136 52.381 0.00 0.00 0.00 4.02
409 428 2.222729 CCGTTTCGCTTTTGTCCGATAG 60.223 50.000 0.00 0.00 33.04 2.08
410 429 2.410730 CGTTTCGCTTTTGTCCGATAGT 59.589 45.455 0.00 0.00 33.04 2.12
432 451 1.133199 TGGCCACTGTTCCATCCTTTT 60.133 47.619 0.00 0.00 0.00 2.27
433 452 2.109128 TGGCCACTGTTCCATCCTTTTA 59.891 45.455 0.00 0.00 0.00 1.52
434 453 3.245586 TGGCCACTGTTCCATCCTTTTAT 60.246 43.478 0.00 0.00 0.00 1.40
514 549 8.485392 TCAAGTCTGTTGGTGATTGATGATATA 58.515 33.333 0.00 0.00 0.00 0.86
516 551 9.499479 AAGTCTGTTGGTGATTGATGATATATC 57.501 33.333 5.73 5.73 0.00 1.63
517 552 8.878211 AGTCTGTTGGTGATTGATGATATATCT 58.122 33.333 13.79 0.00 0.00 1.98
577 612 1.644786 AACTGCCGCCATTAGAACGC 61.645 55.000 0.00 0.00 0.00 4.84
624 669 4.829492 ACTTTACTTTCTTGGCTGCATCTT 59.171 37.500 0.50 0.00 0.00 2.40
626 671 3.930634 ACTTTCTTGGCTGCATCTTTC 57.069 42.857 0.50 0.00 0.00 2.62
627 672 3.225104 ACTTTCTTGGCTGCATCTTTCA 58.775 40.909 0.50 0.00 0.00 2.69
628 673 3.830755 ACTTTCTTGGCTGCATCTTTCAT 59.169 39.130 0.50 0.00 0.00 2.57
629 674 5.012239 ACTTTCTTGGCTGCATCTTTCATA 58.988 37.500 0.50 0.00 0.00 2.15
631 676 5.571784 TTCTTGGCTGCATCTTTCATAAG 57.428 39.130 0.50 0.00 0.00 1.73
649 722 3.967332 AAGGGGATGCAATTTTGTCTG 57.033 42.857 0.00 0.00 0.00 3.51
855 933 2.660064 ATGCTCTGACACCCCCGTC 61.660 63.158 0.00 0.00 36.40 4.79
933 1011 1.826054 CAAAGGTGGTGCGGGTTCA 60.826 57.895 0.00 0.00 0.00 3.18
1015 1093 1.207089 CGACCATGGAAAGGTGAGCTA 59.793 52.381 21.47 0.00 40.09 3.32
1018 1096 4.636249 GACCATGGAAAGGTGAGCTATAG 58.364 47.826 21.47 0.00 40.09 1.31
1022 1100 6.330250 ACCATGGAAAGGTGAGCTATAGTTAT 59.670 38.462 21.47 0.00 38.13 1.89
1050 1128 3.305335 GCCCATTGTATATTTTCTGGCGG 60.305 47.826 0.00 0.00 0.00 6.13
1178 1256 9.328845 AGAAACAAATGAAATTGTAAGTGCATT 57.671 25.926 0.00 0.00 42.49 3.56
1198 1284 3.845781 TCTTGTCAAAGGACTCTGCTT 57.154 42.857 0.00 0.00 44.61 3.91
1210 1296 5.685728 AGGACTCTGCTTTCTTGTAACTTT 58.314 37.500 0.00 0.00 0.00 2.66
1238 1340 4.879197 AGCCTCATTTTTCTTCCCTTTG 57.121 40.909 0.00 0.00 0.00 2.77
1423 1748 8.251026 GGGTATATCATCGTATCTGATCAAACA 58.749 37.037 0.00 0.00 35.12 2.83
1428 1753 5.580691 TCATCGTATCTGATCAAACAACACC 59.419 40.000 0.00 0.00 0.00 4.16
1436 1761 2.724977 TCAAACAACACCGTTTTGCA 57.275 40.000 0.00 0.00 36.98 4.08
1492 1817 3.621558 CCTCCAGAAACTAAATCACCCC 58.378 50.000 0.00 0.00 0.00 4.95
1531 1856 2.678336 GGAGGTGACGATGGAAAATCAC 59.322 50.000 0.00 0.00 40.62 3.06
1579 1908 8.579006 CACATGGTATTATGTTATTCTTGGCAT 58.421 33.333 0.00 0.00 39.17 4.40
1630 1959 8.748412 AGCAAAACATTAATAGCAATTCCTACA 58.252 29.630 0.00 0.00 0.00 2.74
1635 1964 5.940192 TTAATAGCAATTCCTACATGCGG 57.060 39.130 0.00 0.00 44.60 5.69
1640 1969 2.632377 CAATTCCTACATGCGGTCTGT 58.368 47.619 0.00 0.00 0.00 3.41
1644 1973 3.728076 TCCTACATGCGGTCTGTTATC 57.272 47.619 0.00 0.00 0.00 1.75
1650 1979 4.579869 ACATGCGGTCTGTTATCTTCTTT 58.420 39.130 0.00 0.00 0.00 2.52
1652 1981 5.473504 ACATGCGGTCTGTTATCTTCTTTTT 59.526 36.000 0.00 0.00 0.00 1.94
1668 1997 8.062065 TCTTCTTTTTGATGTTTGTACCAAGT 57.938 30.769 0.00 0.00 0.00 3.16
1669 1998 7.973388 TCTTCTTTTTGATGTTTGTACCAAGTG 59.027 33.333 0.00 0.00 0.00 3.16
1672 2001 8.740906 TCTTTTTGATGTTTGTACCAAGTGTTA 58.259 29.630 0.00 0.00 0.00 2.41
1674 2003 8.864069 TTTTGATGTTTGTACCAAGTGTTATG 57.136 30.769 0.00 0.00 0.00 1.90
1675 2004 7.809546 TTGATGTTTGTACCAAGTGTTATGA 57.190 32.000 0.00 0.00 0.00 2.15
1676 2005 7.197071 TGATGTTTGTACCAAGTGTTATGAC 57.803 36.000 0.00 0.00 0.00 3.06
1677 2006 6.995686 TGATGTTTGTACCAAGTGTTATGACT 59.004 34.615 0.00 0.00 0.00 3.41
1678 2007 8.151596 TGATGTTTGTACCAAGTGTTATGACTA 58.848 33.333 0.00 0.00 0.00 2.59
1679 2008 7.718272 TGTTTGTACCAAGTGTTATGACTAC 57.282 36.000 0.00 0.00 0.00 2.73
1688 2017 6.535150 CCAAGTGTTATGACTACCTACATGTG 59.465 42.308 9.11 0.00 0.00 3.21
1751 2149 7.926018 ACTTGGGTTCACATTTCTTAATTTGTC 59.074 33.333 0.00 0.00 0.00 3.18
1780 2178 1.179152 TTCATCTTACGTCGGCTGGA 58.821 50.000 0.00 0.00 0.00 3.86
1816 2214 8.784043 GTTTTTAAACTTCCTATGCTCTCTTGA 58.216 33.333 0.00 0.00 36.03 3.02
1819 2217 5.489792 AACTTCCTATGCTCTCTTGAACA 57.510 39.130 0.00 0.00 0.00 3.18
1827 2225 3.405831 TGCTCTCTTGAACATCTTGTGG 58.594 45.455 0.00 0.00 0.00 4.17
2011 2409 4.148838 TGAAACCTGGTAATTTGGTGGAG 58.851 43.478 0.00 0.00 33.89 3.86
2034 2432 7.699812 GGAGTAAATTCTGTTTGAATGATGCTC 59.300 37.037 0.00 0.00 43.99 4.26
2040 2438 3.349927 TGTTTGAATGATGCTCCCTCTG 58.650 45.455 0.00 0.00 0.00 3.35
2106 2506 3.485463 AATCTTCTGGTGACAAACGGA 57.515 42.857 0.00 0.00 42.06 4.69
2202 2603 5.089970 CCAGATGGTGAGTTTCTGTATGA 57.910 43.478 0.00 0.00 36.06 2.15
2230 2631 5.372661 AGGCCATGTTACTCTATTGGGTATT 59.627 40.000 5.01 0.00 0.00 1.89
2231 2632 6.068670 GGCCATGTTACTCTATTGGGTATTT 58.931 40.000 0.00 0.00 0.00 1.40
2236 2637 9.847224 CATGTTACTCTATTGGGTATTTACCTT 57.153 33.333 6.71 0.00 45.72 3.50
2249 2650 7.050377 GGGTATTTACCTTAACCTTACCTGTC 58.950 42.308 6.71 0.00 45.72 3.51
2252 2653 9.106070 GTATTTACCTTAACCTTACCTGTCATG 57.894 37.037 0.00 0.00 0.00 3.07
2337 2738 7.554118 GGTGATGATTCTCTCATTGGTTTAAGA 59.446 37.037 0.00 0.00 44.83 2.10
2453 3037 9.595823 TTCTAATTGCCTAACACATAGTAACTC 57.404 33.333 0.00 0.00 0.00 3.01
2454 3038 8.978472 TCTAATTGCCTAACACATAGTAACTCT 58.022 33.333 0.00 0.00 0.00 3.24
2485 3069 5.296813 ACGAGAAATAAATGACACCTTGC 57.703 39.130 0.00 0.00 0.00 4.01
2494 3078 5.343307 AAATGACACCTTGCCATATTTCC 57.657 39.130 0.00 0.00 0.00 3.13
2495 3079 3.737559 TGACACCTTGCCATATTTCCT 57.262 42.857 0.00 0.00 0.00 3.36
2745 3352 2.020720 ACACTGACCTCTATCGCTCTG 58.979 52.381 0.00 0.00 0.00 3.35
2848 3455 1.600058 TCTGGCCAGAGGGAATGAAT 58.400 50.000 32.00 0.00 35.59 2.57
3134 3743 4.620803 CGTTCATTCTACTTACACCTGGCT 60.621 45.833 0.00 0.00 0.00 4.75
3147 3756 4.962155 ACACCTGGCTTATAAGTATCAGC 58.038 43.478 13.91 0.00 33.34 4.26
3213 3822 7.498570 TGCATTGTTACATAGATTGTGATAGCA 59.501 33.333 0.00 0.00 39.48 3.49
3270 3879 7.389803 TGTCCTTGATGTTATTTATGTGGTG 57.610 36.000 0.00 0.00 0.00 4.17
3297 3906 7.396540 AATTTTCCTCATTAACCTGCTACTG 57.603 36.000 0.00 0.00 0.00 2.74
3305 3914 5.637810 TCATTAACCTGCTACTGTTTTCTCG 59.362 40.000 0.00 0.00 0.00 4.04
3313 3922 6.371809 TGCTACTGTTTTCTCGTCATTTTT 57.628 33.333 0.00 0.00 0.00 1.94
3514 4123 4.815308 CCATGATGCTTCCTACTCAAAGAG 59.185 45.833 0.00 0.00 35.52 2.85
3533 4142 3.704061 AGAGGAATGAGCCTAGTGAGTTC 59.296 47.826 0.00 0.00 38.73 3.01
3535 4144 3.450457 AGGAATGAGCCTAGTGAGTTCTG 59.550 47.826 0.00 0.00 36.22 3.02
3563 4172 5.239306 TCACAGTTCATTTGCTAGGAAGTTG 59.761 40.000 0.00 0.02 0.00 3.16
3616 4225 0.827368 ATCGAGCTCCCACTTCCTTC 59.173 55.000 8.47 0.00 0.00 3.46
3723 4332 2.752030 AGCCAAGCTCTGTATCAGGTA 58.248 47.619 0.00 0.00 30.62 3.08
3724 4333 2.432510 AGCCAAGCTCTGTATCAGGTAC 59.567 50.000 0.00 0.00 30.62 3.34
3725 4334 2.483889 GCCAAGCTCTGTATCAGGTACC 60.484 54.545 2.73 2.73 32.03 3.34
3726 4335 2.766263 CCAAGCTCTGTATCAGGTACCA 59.234 50.000 15.94 0.00 32.03 3.25
3727 4336 3.197766 CCAAGCTCTGTATCAGGTACCAA 59.802 47.826 15.94 1.46 32.03 3.67
3728 4337 4.323485 CCAAGCTCTGTATCAGGTACCAAA 60.323 45.833 15.94 1.03 32.03 3.28
3729 4338 5.245531 CAAGCTCTGTATCAGGTACCAAAA 58.754 41.667 15.94 0.00 32.03 2.44
3730 4339 4.833390 AGCTCTGTATCAGGTACCAAAAC 58.167 43.478 15.94 7.18 32.03 2.43
3731 4340 4.286032 AGCTCTGTATCAGGTACCAAAACA 59.714 41.667 15.94 11.39 32.03 2.83
3732 4341 5.045578 AGCTCTGTATCAGGTACCAAAACAT 60.046 40.000 15.94 0.64 32.03 2.71
3733 4342 5.648092 GCTCTGTATCAGGTACCAAAACATT 59.352 40.000 15.94 0.00 32.03 2.71
3734 4343 6.151144 GCTCTGTATCAGGTACCAAAACATTT 59.849 38.462 15.94 0.00 32.03 2.32
3735 4344 7.626452 GCTCTGTATCAGGTACCAAAACATTTC 60.626 40.741 15.94 1.73 32.03 2.17
3736 4345 7.227873 TCTGTATCAGGTACCAAAACATTTCA 58.772 34.615 15.94 0.90 32.03 2.69
3737 4346 7.174253 TCTGTATCAGGTACCAAAACATTTCAC 59.826 37.037 15.94 0.00 32.03 3.18
3738 4347 7.001674 TGTATCAGGTACCAAAACATTTCACT 58.998 34.615 15.94 0.00 32.03 3.41
3739 4348 6.575162 ATCAGGTACCAAAACATTTCACTC 57.425 37.500 15.94 0.00 0.00 3.51
3740 4349 4.825085 TCAGGTACCAAAACATTTCACTCC 59.175 41.667 15.94 0.00 0.00 3.85
3741 4350 4.827284 CAGGTACCAAAACATTTCACTCCT 59.173 41.667 15.94 0.00 0.00 3.69
3742 4351 4.827284 AGGTACCAAAACATTTCACTCCTG 59.173 41.667 15.94 0.00 0.00 3.86
3743 4352 4.583073 GGTACCAAAACATTTCACTCCTGT 59.417 41.667 7.15 0.00 0.00 4.00
3744 4353 5.068591 GGTACCAAAACATTTCACTCCTGTT 59.931 40.000 7.15 0.00 34.71 3.16
3745 4354 5.009854 ACCAAAACATTTCACTCCTGTTG 57.990 39.130 0.00 0.00 33.60 3.33
3746 4355 4.709397 ACCAAAACATTTCACTCCTGTTGA 59.291 37.500 0.00 0.00 33.60 3.18
3747 4356 5.186797 ACCAAAACATTTCACTCCTGTTGAA 59.813 36.000 0.00 0.00 33.60 2.69
3790 4399 4.370049 TGTTCGAAAACAGTAATCGGTCA 58.630 39.130 0.00 5.46 40.45 4.02
3791 4400 4.992319 TGTTCGAAAACAGTAATCGGTCAT 59.008 37.500 0.00 0.00 40.45 3.06
3986 4597 7.988028 GGGATAAGATATTATGCTGGACTAACC 59.012 40.741 10.83 0.00 39.54 2.85
3995 4606 3.178046 TGCTGGACTAACCCATGTTCTA 58.822 45.455 0.00 0.00 38.00 2.10
3996 4607 3.585289 TGCTGGACTAACCCATGTTCTAA 59.415 43.478 0.00 0.00 38.00 2.10
3997 4608 3.939592 GCTGGACTAACCCATGTTCTAAC 59.060 47.826 0.00 0.00 38.00 2.34
3999 4610 5.745227 CTGGACTAACCCATGTTCTAACAT 58.255 41.667 2.47 2.47 42.39 2.71
4188 4823 5.398603 ACATAGACAAGAGGTGAGAGTTG 57.601 43.478 0.00 0.00 0.00 3.16
4215 4850 7.047891 TCTTTGTGACATGGGAGTTACATATC 58.952 38.462 0.00 0.00 37.75 1.63
4362 5002 9.750125 AAATCTTGATTTGGAACTGTTTTCTAC 57.250 29.630 7.68 0.00 0.00 2.59
4366 5010 5.592282 TGATTTGGAACTGTTTTCTACTGCA 59.408 36.000 0.00 0.00 0.00 4.41
4382 5026 7.425577 TCTACTGCATACAAATATGTGCATC 57.574 36.000 0.00 0.00 40.84 3.91
4385 5029 3.314635 TGCATACAAATATGTGCATCGCA 59.685 39.130 0.00 0.00 40.84 5.10
4447 5091 2.073816 ACCACTTCACGCGGATAAAAG 58.926 47.619 12.47 8.74 0.00 2.27
4448 5092 1.202031 CCACTTCACGCGGATAAAAGC 60.202 52.381 12.47 0.00 0.00 3.51
4469 5124 4.393680 AGCGTAAACAATATGAAGCGGAAA 59.606 37.500 0.00 0.00 0.00 3.13
4477 5132 6.963796 ACAATATGAAGCGGAAATTCAGATC 58.036 36.000 0.00 0.00 37.56 2.75
4478 5133 6.769822 ACAATATGAAGCGGAAATTCAGATCT 59.230 34.615 0.00 0.00 37.56 2.75
4484 5139 7.500992 TGAAGCGGAAATTCAGATCTAGTAAT 58.499 34.615 0.00 0.00 32.96 1.89
4485 5140 7.439356 TGAAGCGGAAATTCAGATCTAGTAATG 59.561 37.037 0.00 0.00 32.96 1.90
4526 5181 5.873179 TTATAAGAAACCGCCAAAGTCAG 57.127 39.130 0.00 0.00 0.00 3.51
4532 5187 5.930135 AGAAACCGCCAAAGTCAGATATAT 58.070 37.500 0.00 0.00 0.00 0.86
4564 5219 9.793259 TGACTAAACTAATCAAACTTTCCTGAT 57.207 29.630 0.00 0.00 33.66 2.90
4624 5279 0.107643 TCATGGTTCCGTGTTGCTCA 59.892 50.000 10.35 0.00 0.00 4.26
4625 5280 0.518636 CATGGTTCCGTGTTGCTCAG 59.481 55.000 3.13 0.00 0.00 3.35
4646 5301 3.508402 AGAGACGTGGGTTGTTTGTTTTT 59.492 39.130 0.00 0.00 0.00 1.94
4691 5346 1.725164 CTCATGTCATCATCGCATCGG 59.275 52.381 0.00 0.00 31.15 4.18
4694 5349 2.356194 TCATCATCGCATCGGCCG 60.356 61.111 22.12 22.12 36.38 6.13
4739 5394 1.746615 CTGGCAGCAGGCGTACATT 60.747 57.895 0.00 0.00 46.16 2.71
4741 5396 2.100991 GCAGCAGGCGTACATTGC 59.899 61.111 5.38 5.38 38.09 3.56
4751 5406 1.659098 GCGTACATTGCTGACAGGTAC 59.341 52.381 4.26 7.07 36.13 3.34
4769 5424 4.524714 AGGTACGCAGCTCACATATCTAAT 59.475 41.667 0.00 0.00 0.00 1.73
4784 5439 8.011673 CACATATCTAATTCCACAAATGCGTAG 58.988 37.037 0.00 0.00 0.00 3.51
4818 5473 3.834231 CCAAAACCAGACCAGATTCCATT 59.166 43.478 0.00 0.00 0.00 3.16
4822 5477 1.133668 CCAGACCAGATTCCATTCCCC 60.134 57.143 0.00 0.00 0.00 4.81
4823 5478 0.839946 AGACCAGATTCCATTCCCCG 59.160 55.000 0.00 0.00 0.00 5.73
4824 5479 0.819666 GACCAGATTCCATTCCCCGC 60.820 60.000 0.00 0.00 0.00 6.13
4825 5480 1.281925 ACCAGATTCCATTCCCCGCT 61.282 55.000 0.00 0.00 0.00 5.52
4843 5498 1.329906 GCTCACTCATGATTGCTTCCG 59.670 52.381 8.14 0.00 33.22 4.30
4846 5501 3.411446 TCACTCATGATTGCTTCCGTTT 58.589 40.909 8.14 0.00 0.00 3.60
4848 5503 3.916172 CACTCATGATTGCTTCCGTTTTG 59.084 43.478 0.00 0.00 0.00 2.44
4849 5504 3.569701 ACTCATGATTGCTTCCGTTTTGT 59.430 39.130 0.00 0.00 0.00 2.83
4852 5507 4.744137 TCATGATTGCTTCCGTTTTGTTTG 59.256 37.500 0.00 0.00 0.00 2.93
4853 5508 2.863137 TGATTGCTTCCGTTTTGTTTGC 59.137 40.909 0.00 0.00 0.00 3.68
4862 5517 1.266793 CGTTTTGTTTGCGGTGCTTTG 60.267 47.619 0.00 0.00 0.00 2.77
4875 5530 2.567497 GCTTTGCTCAGCCAAGCCA 61.567 57.895 22.21 0.00 46.86 4.75
4958 5613 2.045536 CTGTTCCCTCTGCAGCCC 60.046 66.667 9.47 0.00 0.00 5.19
4964 5619 2.360852 CCTCTGCAGCCCAACCTG 60.361 66.667 9.47 0.00 35.93 4.00
5025 5680 2.412089 GTCAATTTCTTCTGACCGACGG 59.588 50.000 13.61 13.61 36.72 4.79
5031 5686 1.006571 TTCTGACCGACGGCTGAAC 60.007 57.895 15.39 1.29 0.00 3.18
5033 5688 1.300620 CTGACCGACGGCTGAACAA 60.301 57.895 15.39 0.00 0.00 2.83
5034 5689 1.557443 CTGACCGACGGCTGAACAAC 61.557 60.000 15.39 0.00 0.00 3.32
5035 5690 2.654912 GACCGACGGCTGAACAACG 61.655 63.158 15.39 0.00 0.00 4.10
5049 5705 0.106708 ACAACGATGATGATCCCCCG 59.893 55.000 0.00 0.00 0.00 5.73
5052 5708 2.217038 CGATGATGATCCCCCGGGT 61.217 63.158 21.85 0.00 36.47 5.28
5053 5709 1.768684 CGATGATGATCCCCCGGGTT 61.769 60.000 21.85 3.12 36.47 4.11
5054 5710 0.478507 GATGATGATCCCCCGGGTTT 59.521 55.000 21.85 2.68 36.47 3.27
5055 5711 0.185901 ATGATGATCCCCCGGGTTTG 59.814 55.000 21.85 7.74 36.47 2.93
5056 5712 1.152756 GATGATCCCCCGGGTTTGG 60.153 63.158 21.85 14.37 36.47 3.28
5093 5749 5.447954 GCAGCAGCAGATCATCATTATCATC 60.448 44.000 0.00 0.00 41.58 2.92
5097 5753 6.316390 GCAGCAGATCATCATTATCATCATCA 59.684 38.462 0.00 0.00 0.00 3.07
5098 5754 7.012799 GCAGCAGATCATCATTATCATCATCAT 59.987 37.037 0.00 0.00 0.00 2.45
5099 5755 8.555361 CAGCAGATCATCATTATCATCATCATC 58.445 37.037 0.00 0.00 0.00 2.92
5100 5756 8.267894 AGCAGATCATCATTATCATCATCATCA 58.732 33.333 0.00 0.00 0.00 3.07
5101 5757 9.061435 GCAGATCATCATTATCATCATCATCAT 57.939 33.333 0.00 0.00 0.00 2.45
5103 5759 9.785982 AGATCATCATTATCATCATCATCATCC 57.214 33.333 0.00 0.00 0.00 3.51
5148 5816 1.480219 GACTCGGACAATAAGCCGCG 61.480 60.000 0.00 0.00 46.79 6.46
5149 5817 2.871427 CTCGGACAATAAGCCGCGC 61.871 63.158 0.00 0.00 46.79 6.86
5150 5818 4.279535 CGGACAATAAGCCGCGCG 62.280 66.667 25.67 25.67 41.17 6.86
5151 5819 3.937062 GGACAATAAGCCGCGCGG 61.937 66.667 43.13 43.13 38.57 6.46
5152 5820 3.937062 GACAATAAGCCGCGCGGG 61.937 66.667 45.81 31.31 39.58 6.13
5180 5848 4.724602 GAGGCGACGACAGCAGCA 62.725 66.667 2.19 0.00 36.08 4.41
5181 5849 4.731612 AGGCGACGACAGCAGCAG 62.732 66.667 2.19 0.00 36.08 4.24
5182 5850 4.724602 GGCGACGACAGCAGCAGA 62.725 66.667 0.00 0.00 36.08 4.26
5186 5872 1.856012 GACGACAGCAGCAGACAAC 59.144 57.895 0.00 0.00 0.00 3.32
5190 5876 1.595489 CGACAGCAGCAGACAACAAAC 60.595 52.381 0.00 0.00 0.00 2.93
5221 5907 8.857098 ACATACATATTCGTAGTAGGTTGACAT 58.143 33.333 0.00 0.00 29.57 3.06
5222 5908 9.343103 CATACATATTCGTAGTAGGTTGACATC 57.657 37.037 0.00 0.00 0.00 3.06
5223 5909 7.342769 ACATATTCGTAGTAGGTTGACATCA 57.657 36.000 0.00 0.00 0.00 3.07
5224 5910 7.426410 ACATATTCGTAGTAGGTTGACATCAG 58.574 38.462 0.00 0.00 0.00 2.90
5225 5911 4.713824 TTCGTAGTAGGTTGACATCAGG 57.286 45.455 0.00 0.00 0.00 3.86
5244 5930 5.592054 TCAGGTCATCATCGTATTTGAGAC 58.408 41.667 0.00 0.00 0.00 3.36
5266 5952 8.405418 AGACTCTGTTACTCTGTACATACAAA 57.595 34.615 0.00 0.00 35.50 2.83
5267 5953 8.298140 AGACTCTGTTACTCTGTACATACAAAC 58.702 37.037 0.00 0.41 35.50 2.93
5268 5954 7.948357 ACTCTGTTACTCTGTACATACAAACA 58.052 34.615 0.00 5.07 35.50 2.83
5269 5955 8.418662 ACTCTGTTACTCTGTACATACAAACAA 58.581 33.333 0.00 0.00 34.64 2.83
5310 6000 6.805271 CGACCGTGGTTTTTCTCGATATATAT 59.195 38.462 0.00 0.00 0.00 0.86
5358 6058 5.698104 TGAAGATTCAAGTCATATGGCCAT 58.302 37.500 24.45 24.45 33.55 4.40
5359 6059 6.131264 TGAAGATTCAAGTCATATGGCCATT 58.869 36.000 26.37 9.15 33.55 3.16
5360 6060 6.263842 TGAAGATTCAAGTCATATGGCCATTC 59.736 38.462 26.37 11.14 33.55 2.67
5361 6061 5.075493 AGATTCAAGTCATATGGCCATTCC 58.925 41.667 26.37 9.45 0.00 3.01
5362 6062 4.524802 TTCAAGTCATATGGCCATTCCT 57.475 40.909 26.37 11.68 35.26 3.36
5363 6063 5.645056 TTCAAGTCATATGGCCATTCCTA 57.355 39.130 26.37 5.84 35.26 2.94
5364 6064 4.973168 TCAAGTCATATGGCCATTCCTAC 58.027 43.478 26.37 16.62 35.26 3.18
5365 6065 4.074970 CAAGTCATATGGCCATTCCTACC 58.925 47.826 26.37 7.59 35.26 3.18
5366 6066 3.326521 AGTCATATGGCCATTCCTACCA 58.673 45.455 26.37 3.59 37.99 3.25
5398 6098 5.534207 TTCTTTGATGTCTGCATTTGGTT 57.466 34.783 0.00 0.00 35.07 3.67
5402 6102 5.534207 TTGATGTCTGCATTTGGTTTCTT 57.466 34.783 0.00 0.00 35.07 2.52
5406 6106 7.092079 TGATGTCTGCATTTGGTTTCTTTATG 58.908 34.615 0.00 0.00 35.07 1.90
5407 6107 6.647334 TGTCTGCATTTGGTTTCTTTATGA 57.353 33.333 0.00 0.00 0.00 2.15
5408 6108 7.230849 TGTCTGCATTTGGTTTCTTTATGAT 57.769 32.000 0.00 0.00 0.00 2.45
5409 6109 7.092079 TGTCTGCATTTGGTTTCTTTATGATG 58.908 34.615 0.00 0.00 0.00 3.07
5410 6110 7.039853 TGTCTGCATTTGGTTTCTTTATGATGA 60.040 33.333 0.00 0.00 0.00 2.92
5411 6111 7.977853 GTCTGCATTTGGTTTCTTTATGATGAT 59.022 33.333 0.00 0.00 0.00 2.45
5412 6112 9.187996 TCTGCATTTGGTTTCTTTATGATGATA 57.812 29.630 0.00 0.00 0.00 2.15
5413 6113 9.976511 CTGCATTTGGTTTCTTTATGATGATAT 57.023 29.630 0.00 0.00 0.00 1.63
5414 6114 9.970395 TGCATTTGGTTTCTTTATGATGATATC 57.030 29.630 0.00 0.00 0.00 1.63
5415 6115 9.415544 GCATTTGGTTTCTTTATGATGATATCC 57.584 33.333 0.00 0.00 0.00 2.59
5416 6116 9.918630 CATTTGGTTTCTTTATGATGATATCCC 57.081 33.333 0.00 0.00 0.00 3.85
5418 6118 9.713684 TTTGGTTTCTTTATGATGATATCCCTT 57.286 29.630 0.00 0.00 0.00 3.95
5419 6119 8.696043 TGGTTTCTTTATGATGATATCCCTTG 57.304 34.615 0.00 0.00 0.00 3.61
5422 6122 9.342308 GTTTCTTTATGATGATATCCCTTGTGA 57.658 33.333 0.00 0.00 0.00 3.58
5441 6158 4.886489 TGTGATGTTGTTTCTGATGGTGAA 59.114 37.500 0.00 0.00 0.00 3.18
5489 6206 2.283604 TGGCGTACCAGGAGCTGA 60.284 61.111 0.00 0.00 42.67 4.26
5509 6226 0.540365 CACTGGTTGGGCTGGAATGT 60.540 55.000 0.00 0.00 0.00 2.71
5514 6233 1.560505 GTTGGGCTGGAATGTTGGAT 58.439 50.000 0.00 0.00 0.00 3.41
5525 6244 2.779755 ATGTTGGATGCACGGAGTAA 57.220 45.000 0.00 0.00 41.61 2.24
5526 6245 2.552599 TGTTGGATGCACGGAGTAAA 57.447 45.000 0.00 0.00 41.61 2.01
5527 6246 2.422597 TGTTGGATGCACGGAGTAAAG 58.577 47.619 0.00 0.00 41.61 1.85
5528 6247 1.737793 GTTGGATGCACGGAGTAAAGG 59.262 52.381 0.00 0.00 41.61 3.11
5529 6248 0.392461 TGGATGCACGGAGTAAAGGC 60.392 55.000 0.00 0.00 41.61 4.35
5560 6283 2.802816 GCATTGAAGTGAAGTGACGACT 59.197 45.455 0.00 0.00 0.00 4.18
5576 6302 7.046652 AGTGACGACTACTATTACTAGCTTGA 58.953 38.462 1.04 0.00 0.00 3.02
5577 6303 7.716123 AGTGACGACTACTATTACTAGCTTGAT 59.284 37.037 1.04 0.00 0.00 2.57
5597 6325 1.064463 TGTAGTACGAGGGGGTGTAGG 60.064 57.143 0.00 0.00 0.00 3.18
5657 6385 2.705730 GGTGGAAAGAAAGGAGAGAGC 58.294 52.381 0.00 0.00 0.00 4.09
5662 6392 1.931635 AAGAAAGGAGAGAGCGGAGT 58.068 50.000 0.00 0.00 0.00 3.85
5683 6413 4.586001 AGTAGTAAAGGTCGGTTCTGACAA 59.414 41.667 12.84 0.00 40.72 3.18
5685 6415 1.578583 AAAGGTCGGTTCTGACAACG 58.421 50.000 12.84 0.00 40.72 4.10
5696 6426 5.004440 CGGTTCTGACAACGATGTAATGTAG 59.996 44.000 0.00 0.00 40.74 2.74
5706 6441 4.161565 ACGATGTAATGTAGCCTCAAGGAA 59.838 41.667 0.00 0.00 37.39 3.36
5751 6490 1.458445 GCTTCAGTACCGTTTTCGTCC 59.542 52.381 0.00 0.00 42.35 4.79
5753 6492 3.387397 CTTCAGTACCGTTTTCGTCCTT 58.613 45.455 0.00 0.00 42.35 3.36
5775 6518 1.837538 TTTCTTTCTTGGTCCGCGCG 61.838 55.000 25.67 25.67 0.00 6.86
5787 6530 4.214383 CGCGCGGCACTGATCAAG 62.214 66.667 24.84 0.00 0.00 3.02
5788 6531 4.527157 GCGCGGCACTGATCAAGC 62.527 66.667 8.83 10.52 0.00 4.01
5789 6532 3.120385 CGCGGCACTGATCAAGCA 61.120 61.111 18.30 0.00 0.00 3.91
5790 6533 2.679934 CGCGGCACTGATCAAGCAA 61.680 57.895 18.30 0.00 0.00 3.91
5791 6534 1.580942 GCGGCACTGATCAAGCAAA 59.419 52.632 18.30 0.00 0.00 3.68
5792 6535 0.730494 GCGGCACTGATCAAGCAAAC 60.730 55.000 18.30 6.28 0.00 2.93
5793 6536 0.592637 CGGCACTGATCAAGCAAACA 59.407 50.000 18.30 0.00 0.00 2.83
5794 6537 1.200716 CGGCACTGATCAAGCAAACAT 59.799 47.619 18.30 0.00 0.00 2.71
5795 6538 2.419673 CGGCACTGATCAAGCAAACATA 59.580 45.455 18.30 0.00 0.00 2.29
5796 6539 3.119884 CGGCACTGATCAAGCAAACATAA 60.120 43.478 18.30 0.00 0.00 1.90
5797 6540 4.439153 CGGCACTGATCAAGCAAACATAAT 60.439 41.667 18.30 0.00 0.00 1.28
5798 6541 5.220835 CGGCACTGATCAAGCAAACATAATA 60.221 40.000 18.30 0.00 0.00 0.98
5799 6542 6.204359 GGCACTGATCAAGCAAACATAATAG 58.796 40.000 18.30 0.00 0.00 1.73
5800 6543 6.204359 GCACTGATCAAGCAAACATAATAGG 58.796 40.000 13.34 0.00 0.00 2.57
5801 6544 6.183360 GCACTGATCAAGCAAACATAATAGGT 60.183 38.462 13.34 0.00 0.00 3.08
5802 6545 7.412853 CACTGATCAAGCAAACATAATAGGTC 58.587 38.462 0.00 0.00 0.00 3.85
5803 6546 7.281774 CACTGATCAAGCAAACATAATAGGTCT 59.718 37.037 0.00 0.00 0.00 3.85
5804 6547 7.497249 ACTGATCAAGCAAACATAATAGGTCTC 59.503 37.037 0.00 0.00 0.00 3.36
5805 6548 7.337938 TGATCAAGCAAACATAATAGGTCTCA 58.662 34.615 0.00 0.00 0.00 3.27
5806 6549 6.985188 TCAAGCAAACATAATAGGTCTCAC 57.015 37.500 0.00 0.00 0.00 3.51
5807 6550 5.880332 TCAAGCAAACATAATAGGTCTCACC 59.120 40.000 0.00 0.00 38.99 4.02
5821 6564 4.457466 GGTCTCACCTAGGTTTCAAAACA 58.543 43.478 13.15 0.00 36.60 2.83
5822 6565 4.885325 GGTCTCACCTAGGTTTCAAAACAA 59.115 41.667 13.15 0.00 36.60 2.83
5823 6566 5.535030 GGTCTCACCTAGGTTTCAAAACAAT 59.465 40.000 13.15 0.00 36.60 2.71
5824 6567 6.438763 GTCTCACCTAGGTTTCAAAACAATG 58.561 40.000 13.15 0.00 40.63 2.82
5825 6568 5.534654 TCTCACCTAGGTTTCAAAACAATGG 59.465 40.000 13.15 0.00 40.63 3.16
5826 6569 5.205056 TCACCTAGGTTTCAAAACAATGGT 58.795 37.500 13.15 8.34 40.63 3.55
5827 6570 6.366340 TCACCTAGGTTTCAAAACAATGGTA 58.634 36.000 13.15 0.80 40.63 3.25
5828 6571 6.263617 TCACCTAGGTTTCAAAACAATGGTAC 59.736 38.462 13.15 0.00 40.63 3.34
5829 6572 6.264518 CACCTAGGTTTCAAAACAATGGTACT 59.735 38.462 13.15 0.00 40.63 2.73
5830 6573 7.446013 CACCTAGGTTTCAAAACAATGGTACTA 59.554 37.037 13.15 0.00 40.63 1.82
5831 6574 7.446319 ACCTAGGTTTCAAAACAATGGTACTAC 59.554 37.037 9.21 0.00 40.63 2.73
5832 6575 6.308371 AGGTTTCAAAACAATGGTACTACG 57.692 37.500 7.82 0.00 40.63 3.51
5833 6576 6.056884 AGGTTTCAAAACAATGGTACTACGA 58.943 36.000 7.82 0.00 40.63 3.43
5834 6577 6.543100 AGGTTTCAAAACAATGGTACTACGAA 59.457 34.615 7.82 0.00 40.63 3.85
5835 6578 7.067251 AGGTTTCAAAACAATGGTACTACGAAA 59.933 33.333 7.82 0.00 40.63 3.46
5836 6579 7.863877 GGTTTCAAAACAATGGTACTACGAAAT 59.136 33.333 7.82 0.00 40.63 2.17
5837 6580 8.687301 GTTTCAAAACAATGGTACTACGAAATG 58.313 33.333 0.81 0.00 38.74 2.32
5838 6581 7.499321 TCAAAACAATGGTACTACGAAATGT 57.501 32.000 0.00 0.00 0.00 2.71
5839 6582 7.932335 TCAAAACAATGGTACTACGAAATGTT 58.068 30.769 0.00 0.00 0.00 2.71
5840 6583 7.858382 TCAAAACAATGGTACTACGAAATGTTG 59.142 33.333 0.00 0.00 30.84 3.33
5841 6584 6.870971 AACAATGGTACTACGAAATGTTGT 57.129 33.333 0.00 0.00 39.83 3.32
5842 6585 7.966246 AACAATGGTACTACGAAATGTTGTA 57.034 32.000 0.00 0.00 37.68 2.41
5850 6593 6.165659 ACTACGAAATGTTGTACAGATTGC 57.834 37.500 0.00 0.00 34.69 3.56
5851 6594 5.932303 ACTACGAAATGTTGTACAGATTGCT 59.068 36.000 0.00 0.00 34.69 3.91
5852 6595 5.689383 ACGAAATGTTGTACAGATTGCTT 57.311 34.783 0.00 0.00 0.00 3.91
5853 6596 6.795098 ACGAAATGTTGTACAGATTGCTTA 57.205 33.333 0.00 0.00 0.00 3.09
5854 6597 7.197071 ACGAAATGTTGTACAGATTGCTTAA 57.803 32.000 0.00 0.00 0.00 1.85
5855 6598 7.298122 ACGAAATGTTGTACAGATTGCTTAAG 58.702 34.615 0.00 0.00 0.00 1.85
5856 6599 7.041372 ACGAAATGTTGTACAGATTGCTTAAGT 60.041 33.333 4.02 0.00 0.00 2.24
5857 6600 7.803189 CGAAATGTTGTACAGATTGCTTAAGTT 59.197 33.333 4.02 0.00 0.00 2.66
5858 6601 8.801715 AAATGTTGTACAGATTGCTTAAGTTG 57.198 30.769 4.02 0.00 0.00 3.16
5859 6602 6.935741 TGTTGTACAGATTGCTTAAGTTGT 57.064 33.333 4.02 4.55 0.00 3.32
5860 6603 8.615878 ATGTTGTACAGATTGCTTAAGTTGTA 57.384 30.769 4.02 3.69 0.00 2.41
5861 6604 7.857569 TGTTGTACAGATTGCTTAAGTTGTAC 58.142 34.615 18.56 18.56 40.56 2.90
5862 6605 7.713507 TGTTGTACAGATTGCTTAAGTTGTACT 59.286 33.333 21.99 9.72 40.70 2.73
5863 6606 9.199982 GTTGTACAGATTGCTTAAGTTGTACTA 57.800 33.333 21.99 17.10 40.70 1.82
5864 6607 8.752766 TGTACAGATTGCTTAAGTTGTACTAC 57.247 34.615 21.99 0.00 40.70 2.73
5865 6608 8.582437 TGTACAGATTGCTTAAGTTGTACTACT 58.418 33.333 21.99 3.98 40.70 2.57
5866 6609 9.074443 GTACAGATTGCTTAAGTTGTACTACTC 57.926 37.037 10.44 0.00 38.39 2.59
5867 6610 7.097834 ACAGATTGCTTAAGTTGTACTACTCC 58.902 38.462 10.44 1.46 0.00 3.85
5868 6611 6.253727 CAGATTGCTTAAGTTGTACTACTCCG 59.746 42.308 10.44 3.86 0.00 4.63
5869 6612 5.458041 TTGCTTAAGTTGTACTACTCCGT 57.542 39.130 10.44 0.00 0.00 4.69
5870 6613 5.458041 TGCTTAAGTTGTACTACTCCGTT 57.542 39.130 10.44 0.00 0.00 4.44
5871 6614 5.846203 TGCTTAAGTTGTACTACTCCGTTT 58.154 37.500 10.44 0.00 0.00 3.60
5872 6615 6.282930 TGCTTAAGTTGTACTACTCCGTTTT 58.717 36.000 10.44 0.00 0.00 2.43
5873 6616 6.762661 TGCTTAAGTTGTACTACTCCGTTTTT 59.237 34.615 10.44 0.00 0.00 1.94
5874 6617 7.067728 GCTTAAGTTGTACTACTCCGTTTTTG 58.932 38.462 10.44 0.00 0.00 2.44
5875 6618 7.042523 GCTTAAGTTGTACTACTCCGTTTTTGA 60.043 37.037 10.44 0.00 0.00 2.69
5876 6619 6.594284 AAGTTGTACTACTCCGTTTTTGAC 57.406 37.500 10.44 0.00 0.00 3.18
5877 6620 5.663456 AGTTGTACTACTCCGTTTTTGACA 58.337 37.500 3.98 0.00 0.00 3.58
5878 6621 5.521372 AGTTGTACTACTCCGTTTTTGACAC 59.479 40.000 3.98 0.00 0.00 3.67
5879 6622 5.266733 TGTACTACTCCGTTTTTGACACT 57.733 39.130 0.00 0.00 0.00 3.55
5880 6623 5.663456 TGTACTACTCCGTTTTTGACACTT 58.337 37.500 0.00 0.00 0.00 3.16
5881 6624 5.521010 TGTACTACTCCGTTTTTGACACTTG 59.479 40.000 0.00 0.00 0.00 3.16
5882 6625 4.761975 ACTACTCCGTTTTTGACACTTGA 58.238 39.130 0.00 0.00 0.00 3.02
5883 6626 5.180271 ACTACTCCGTTTTTGACACTTGAA 58.820 37.500 0.00 0.00 0.00 2.69
5884 6627 5.644636 ACTACTCCGTTTTTGACACTTGAAA 59.355 36.000 0.00 0.00 0.00 2.69
5885 6628 4.981794 ACTCCGTTTTTGACACTTGAAAG 58.018 39.130 0.00 0.00 0.00 2.62
5886 6629 4.457949 ACTCCGTTTTTGACACTTGAAAGT 59.542 37.500 0.00 0.00 40.60 2.66
5900 6643 6.009115 ACTTGAAAGTGTCAAAAAGAACGT 57.991 33.333 0.00 0.00 45.67 3.99
5901 6644 6.084277 ACTTGAAAGTGTCAAAAAGAACGTC 58.916 36.000 0.00 0.00 45.67 4.34
5902 6645 5.873179 TGAAAGTGTCAAAAAGAACGTCT 57.127 34.783 0.00 0.00 31.51 4.18
5903 6646 6.249035 TGAAAGTGTCAAAAAGAACGTCTT 57.751 33.333 0.00 0.00 33.50 3.01
5904 6647 7.367159 TGAAAGTGTCAAAAAGAACGTCTTA 57.633 32.000 0.00 0.00 31.78 2.10
5905 6648 7.981142 TGAAAGTGTCAAAAAGAACGTCTTAT 58.019 30.769 0.00 0.00 31.78 1.73
5906 6649 9.100554 TGAAAGTGTCAAAAAGAACGTCTTATA 57.899 29.630 0.00 0.00 31.78 0.98
5910 6653 9.878599 AGTGTCAAAAAGAACGTCTTATATTTG 57.121 29.630 12.34 12.34 35.27 2.32
5911 6654 9.113876 GTGTCAAAAAGAACGTCTTATATTTGG 57.886 33.333 15.44 2.65 35.27 3.28
5912 6655 8.293867 TGTCAAAAAGAACGTCTTATATTTGGG 58.706 33.333 15.44 0.27 35.27 4.12
5913 6656 8.508875 GTCAAAAAGAACGTCTTATATTTGGGA 58.491 33.333 15.44 1.92 35.27 4.37
5914 6657 8.726988 TCAAAAAGAACGTCTTATATTTGGGAG 58.273 33.333 15.44 0.00 35.27 4.30
5915 6658 8.512138 CAAAAAGAACGTCTTATATTTGGGAGT 58.488 33.333 0.00 0.00 35.27 3.85
5916 6659 9.729281 AAAAAGAACGTCTTATATTTGGGAGTA 57.271 29.630 0.00 0.00 35.27 2.59
5917 6660 9.729281 AAAAGAACGTCTTATATTTGGGAGTAA 57.271 29.630 0.00 0.00 35.27 2.24
5918 6661 9.901172 AAAGAACGTCTTATATTTGGGAGTAAT 57.099 29.630 0.00 0.00 35.27 1.89
5919 6662 9.901172 AAGAACGTCTTATATTTGGGAGTAATT 57.099 29.630 0.00 0.00 34.42 1.40
5920 6663 9.543783 AGAACGTCTTATATTTGGGAGTAATTC 57.456 33.333 0.00 0.00 0.00 2.17
5921 6664 9.543783 GAACGTCTTATATTTGGGAGTAATTCT 57.456 33.333 0.00 0.00 0.00 2.40
5922 6665 9.901172 AACGTCTTATATTTGGGAGTAATTCTT 57.099 29.630 0.00 0.00 0.00 2.52
5923 6666 9.901172 ACGTCTTATATTTGGGAGTAATTCTTT 57.099 29.630 0.00 0.00 0.00 2.52
5934 6677 6.912426 GGGAGTAATTCTTTCCCTAAATCCT 58.088 40.000 12.39 0.00 45.84 3.24
5935 6678 8.042286 GGGAGTAATTCTTTCCCTAAATCCTA 57.958 38.462 12.39 0.00 45.84 2.94
5936 6679 8.500238 GGGAGTAATTCTTTCCCTAAATCCTAA 58.500 37.037 12.39 0.00 45.84 2.69
5937 6680 9.916360 GGAGTAATTCTTTCCCTAAATCCTAAA 57.084 33.333 0.00 0.00 0.00 1.85
5942 6685 8.809468 ATTCTTTCCCTAAATCCTAAACTGAC 57.191 34.615 0.00 0.00 0.00 3.51
5943 6686 7.324388 TCTTTCCCTAAATCCTAAACTGACA 57.676 36.000 0.00 0.00 0.00 3.58
5944 6687 7.928873 TCTTTCCCTAAATCCTAAACTGACAT 58.071 34.615 0.00 0.00 0.00 3.06
5945 6688 8.390921 TCTTTCCCTAAATCCTAAACTGACATT 58.609 33.333 0.00 0.00 0.00 2.71
5946 6689 8.950007 TTTCCCTAAATCCTAAACTGACATTT 57.050 30.769 0.00 0.00 0.00 2.32
5947 6690 8.575649 TTCCCTAAATCCTAAACTGACATTTC 57.424 34.615 0.00 0.00 0.00 2.17
5948 6691 7.116736 TCCCTAAATCCTAAACTGACATTTCC 58.883 38.462 0.00 0.00 0.00 3.13
5949 6692 6.321435 CCCTAAATCCTAAACTGACATTTCCC 59.679 42.308 0.00 0.00 0.00 3.97
5950 6693 5.897377 AAATCCTAAACTGACATTTCCCG 57.103 39.130 0.00 0.00 0.00 5.14
5951 6694 2.706890 TCCTAAACTGACATTTCCCGC 58.293 47.619 0.00 0.00 0.00 6.13
5952 6695 2.039216 TCCTAAACTGACATTTCCCGCA 59.961 45.455 0.00 0.00 0.00 5.69
5953 6696 2.817258 CCTAAACTGACATTTCCCGCAA 59.183 45.455 0.00 0.00 0.00 4.85
5954 6697 3.254657 CCTAAACTGACATTTCCCGCAAA 59.745 43.478 0.00 0.00 0.00 3.68
5955 6698 3.810310 AAACTGACATTTCCCGCAAAA 57.190 38.095 0.00 0.00 0.00 2.44
5956 6699 3.810310 AACTGACATTTCCCGCAAAAA 57.190 38.095 0.00 0.00 0.00 1.94
5981 6724 8.943909 AAAGAATCCTAAACTAACATAGTCCG 57.056 34.615 0.00 0.00 38.26 4.79
5982 6725 7.893124 AGAATCCTAAACTAACATAGTCCGA 57.107 36.000 0.00 0.00 38.26 4.55
5983 6726 8.302515 AGAATCCTAAACTAACATAGTCCGAA 57.697 34.615 0.00 0.00 38.26 4.30
5984 6727 8.755977 AGAATCCTAAACTAACATAGTCCGAAA 58.244 33.333 0.00 0.00 38.26 3.46
5985 6728 9.374838 GAATCCTAAACTAACATAGTCCGAAAA 57.625 33.333 0.00 0.00 38.26 2.29
5986 6729 9.729281 AATCCTAAACTAACATAGTCCGAAAAA 57.271 29.630 0.00 0.00 38.26 1.94
5987 6730 8.767478 TCCTAAACTAACATAGTCCGAAAAAG 57.233 34.615 0.00 0.00 38.26 2.27
5988 6731 8.587608 TCCTAAACTAACATAGTCCGAAAAAGA 58.412 33.333 0.00 0.00 38.26 2.52
5989 6732 9.211485 CCTAAACTAACATAGTCCGAAAAAGAA 57.789 33.333 0.00 0.00 38.26 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 3.705051 ACAAACCCGTAGTAGATCAGGA 58.295 45.455 0.00 0.00 0.00 3.86
31 32 4.467198 AACAAACCCGTAGTAGATCAGG 57.533 45.455 0.00 0.00 0.00 3.86
32 33 5.041940 GCTAACAAACCCGTAGTAGATCAG 58.958 45.833 0.00 0.00 0.00 2.90
33 34 4.439153 CGCTAACAAACCCGTAGTAGATCA 60.439 45.833 0.00 0.00 0.00 2.92
34 35 4.040376 CGCTAACAAACCCGTAGTAGATC 58.960 47.826 0.00 0.00 0.00 2.75
35 36 3.445096 ACGCTAACAAACCCGTAGTAGAT 59.555 43.478 0.00 0.00 31.43 1.98
36 37 2.819608 ACGCTAACAAACCCGTAGTAGA 59.180 45.455 0.00 0.00 31.43 2.59
37 38 3.221964 ACGCTAACAAACCCGTAGTAG 57.778 47.619 0.00 0.00 31.43 2.57
38 39 3.574614 GAACGCTAACAAACCCGTAGTA 58.425 45.455 0.00 0.00 33.07 1.82
39 40 2.407090 GAACGCTAACAAACCCGTAGT 58.593 47.619 0.00 0.00 33.07 2.73
97 115 1.272715 CGGAATCGGTTGAATCGCG 59.727 57.895 0.00 0.00 0.00 5.87
108 126 2.223549 GCAATTTGCGCCGGAATCG 61.224 57.895 5.05 0.00 31.71 3.34
140 158 2.762875 GGTACAGACGGGGAGGGG 60.763 72.222 0.00 0.00 0.00 4.79
155 173 2.505982 CCGCGGAAGGATGATGGT 59.494 61.111 24.07 0.00 0.00 3.55
156 174 2.974698 GCCGCGGAAGGATGATGG 60.975 66.667 33.48 0.00 0.00 3.51
157 175 1.958205 GAGCCGCGGAAGGATGATG 60.958 63.158 33.48 0.00 0.00 3.07
201 219 0.179000 AGGAGGCTGCGAATTAGGTG 59.821 55.000 0.00 0.00 0.00 4.00
212 230 1.261238 AAGGTTCGAGGAGGAGGCTG 61.261 60.000 0.00 0.00 0.00 4.85
218 236 0.820871 CTCTGGAAGGTTCGAGGAGG 59.179 60.000 2.37 0.00 34.30 4.30
265 284 3.112075 ACGCGCCATGAACAGTCG 61.112 61.111 5.73 0.00 0.00 4.18
283 302 3.528532 CGAAGGGTACTACAAATCCACC 58.471 50.000 0.00 0.00 0.00 4.61
351 370 0.439985 CGAACCACGCACTCAATCAG 59.560 55.000 0.00 0.00 34.51 2.90
365 384 4.477302 TCCTCGAAAAACAAATCGAACC 57.523 40.909 0.00 0.00 46.26 3.62
369 388 3.124636 ACGGATCCTCGAAAAACAAATCG 59.875 43.478 10.75 0.00 40.31 3.34
432 451 1.396648 CGTGATGGACGCAGCAAAATA 59.603 47.619 0.00 0.00 42.21 1.40
433 452 0.168788 CGTGATGGACGCAGCAAAAT 59.831 50.000 0.00 0.00 42.21 1.82
434 453 1.573932 CGTGATGGACGCAGCAAAA 59.426 52.632 0.00 0.00 42.21 2.44
523 558 8.548625 TTGGAGCCAAACAGAGTTTCTCTCTT 62.549 42.308 0.00 0.00 40.93 2.85
524 559 7.154923 TTGGAGCCAAACAGAGTTTCTCTCT 62.155 44.000 0.00 0.00 42.25 3.10
525 560 3.070748 GGAGCCAAACAGAGTTTCTCTC 58.929 50.000 9.65 9.84 38.99 3.20
526 561 2.439507 TGGAGCCAAACAGAGTTTCTCT 59.560 45.455 9.65 0.00 42.11 3.10
527 562 2.851195 TGGAGCCAAACAGAGTTTCTC 58.149 47.619 0.00 0.00 0.00 2.87
577 612 8.177663 AGTAAATCGAGCACACAAATAAAGATG 58.822 33.333 0.00 0.00 0.00 2.90
624 669 5.721000 AGACAAAATTGCATCCCCTTATGAA 59.279 36.000 0.00 0.00 0.00 2.57
626 671 5.353938 CAGACAAAATTGCATCCCCTTATG 58.646 41.667 0.00 0.00 0.00 1.90
627 672 4.141869 GCAGACAAAATTGCATCCCCTTAT 60.142 41.667 0.00 0.00 40.02 1.73
628 673 3.195396 GCAGACAAAATTGCATCCCCTTA 59.805 43.478 0.00 0.00 40.02 2.69
629 674 2.027837 GCAGACAAAATTGCATCCCCTT 60.028 45.455 0.00 0.00 40.02 3.95
631 676 1.275856 TGCAGACAAAATTGCATCCCC 59.724 47.619 0.00 0.00 44.72 4.81
855 933 5.248640 TGCATAAGAAGAAGAAAGGTCCAG 58.751 41.667 0.00 0.00 0.00 3.86
933 1011 3.064820 CAGTAACAAAACCGAGCACTGTT 59.935 43.478 0.00 0.00 34.71 3.16
1050 1128 6.749923 AGCCTCATCAAAAACTAGTTCATC 57.250 37.500 8.95 0.00 0.00 2.92
1178 1256 3.845781 AAGCAGAGTCCTTTGACAAGA 57.154 42.857 0.00 0.00 44.33 3.02
1210 1296 9.936329 AAGGGAAGAAAAATGAGGCTAATATAA 57.064 29.630 0.00 0.00 0.00 0.98
1233 1335 7.414540 GCATAAAAGTCACAGGATAGACAAAGG 60.415 40.741 0.00 0.00 37.23 3.11
1238 1340 6.595716 ACAAGCATAAAAGTCACAGGATAGAC 59.404 38.462 0.00 0.00 35.02 2.59
1394 1719 8.171164 TGATCAGATACGATGATATACCCATC 57.829 38.462 0.00 6.80 37.52 3.51
1423 1748 3.330267 ACACAAAATGCAAAACGGTGTT 58.670 36.364 8.21 0.00 34.65 3.32
1428 1753 6.199908 TCTCCATTAACACAAAATGCAAAACG 59.800 34.615 0.00 0.00 33.80 3.60
1492 1817 4.460382 ACCTCCTTCAATTGCACTATGTTG 59.540 41.667 0.00 0.00 0.00 3.33
1565 1894 5.708230 AGTAAAACCGATGCCAAGAATAACA 59.292 36.000 0.00 0.00 0.00 2.41
1579 1908 8.674263 TTCCATAAGTTAAACAGTAAAACCGA 57.326 30.769 0.00 0.00 0.00 4.69
1630 1959 5.705441 TCAAAAAGAAGATAACAGACCGCAT 59.295 36.000 0.00 0.00 0.00 4.73
1635 1964 9.736023 ACAAACATCAAAAAGAAGATAACAGAC 57.264 29.630 0.00 0.00 0.00 3.51
1667 1996 6.864342 AGACACATGTAGGTAGTCATAACAC 58.136 40.000 13.80 0.00 0.00 3.32
1668 1997 6.661805 TGAGACACATGTAGGTAGTCATAACA 59.338 38.462 13.80 7.01 0.00 2.41
1669 1998 7.096884 TGAGACACATGTAGGTAGTCATAAC 57.903 40.000 13.80 5.12 0.00 1.89
1672 2001 4.646945 CCTGAGACACATGTAGGTAGTCAT 59.353 45.833 13.80 1.98 0.00 3.06
1674 2003 3.381908 CCCTGAGACACATGTAGGTAGTC 59.618 52.174 10.11 7.78 0.00 2.59
1675 2004 3.011369 TCCCTGAGACACATGTAGGTAGT 59.989 47.826 10.11 0.00 0.00 2.73
1676 2005 3.632333 TCCCTGAGACACATGTAGGTAG 58.368 50.000 10.11 1.29 0.00 3.18
1677 2006 3.750501 TCCCTGAGACACATGTAGGTA 57.249 47.619 10.11 0.00 0.00 3.08
1678 2007 2.623418 TCCCTGAGACACATGTAGGT 57.377 50.000 10.11 0.00 0.00 3.08
1679 2008 5.305386 TGATTATCCCTGAGACACATGTAGG 59.695 44.000 0.00 0.59 0.00 3.18
1688 2017 6.322712 ACAAGACTAGTGATTATCCCTGAGAC 59.677 42.308 0.00 0.00 0.00 3.36
1751 2149 5.004821 CCGACGTAAGATGAATTTCTCACAG 59.995 44.000 0.00 0.00 37.65 3.66
1803 2201 5.293814 CCACAAGATGTTCAAGAGAGCATAG 59.706 44.000 0.00 0.00 44.42 2.23
1805 2203 4.008330 CCACAAGATGTTCAAGAGAGCAT 58.992 43.478 0.00 0.00 46.63 3.79
1807 2205 3.406764 ACCACAAGATGTTCAAGAGAGC 58.593 45.455 0.00 0.00 0.00 4.09
1816 2214 7.719633 AGTTACATTTGAGTACCACAAGATGTT 59.280 33.333 20.86 11.22 34.47 2.71
1819 2217 7.450074 TCAGTTACATTTGAGTACCACAAGAT 58.550 34.615 0.00 0.00 0.00 2.40
1827 2225 7.824779 AGGGAGAAATCAGTTACATTTGAGTAC 59.175 37.037 0.00 0.00 0.00 2.73
2011 2409 6.753744 GGGAGCATCATTCAAACAGAATTTAC 59.246 38.462 0.00 0.00 44.48 2.01
2040 2438 9.543783 CCCTTAGATTAGTCATTTTACTGGTAC 57.456 37.037 0.00 0.00 0.00 3.34
2106 2506 7.053498 ACCCAAAGTCAGCAATTTTAACAATT 58.947 30.769 0.00 0.00 0.00 2.32
2202 2603 5.422012 CCCAATAGAGTAACATGGCCTTTTT 59.578 40.000 3.32 0.00 0.00 1.94
2230 2631 6.691255 ACATGACAGGTAAGGTTAAGGTAA 57.309 37.500 0.00 0.00 0.00 2.85
2231 2632 6.270463 TGAACATGACAGGTAAGGTTAAGGTA 59.730 38.462 0.00 0.00 0.00 3.08
2236 2637 5.072600 ACCTTGAACATGACAGGTAAGGTTA 59.927 40.000 17.67 0.00 42.60 2.85
2249 2650 0.035439 AGCCCGGTACCTTGAACATG 60.035 55.000 10.90 0.00 0.00 3.21
2252 2653 1.078637 GGAGCCCGGTACCTTGAAC 60.079 63.158 10.90 0.00 0.00 3.18
2462 3046 5.353123 GGCAAGGTGTCATTTATTTCTCGTA 59.647 40.000 0.00 0.00 0.00 3.43
2510 3109 5.653255 AGGGGAAGCTATAATGACACAAT 57.347 39.130 0.00 0.00 0.00 2.71
2786 3393 3.990469 AGCACAGCGCATATCTTGTATAC 59.010 43.478 11.47 0.00 46.13 1.47
2848 3455 1.257743 AGCTACTTGAACGAGGCAGA 58.742 50.000 0.00 0.00 0.00 4.26
3147 3756 7.601886 AGAAACATCATGACAGAAGTCTTAGTG 59.398 37.037 0.00 0.00 45.20 2.74
3213 3822 7.977853 GGATTATTCACAGCATTCAAACTCATT 59.022 33.333 0.00 0.00 0.00 2.57
3270 3879 9.343539 AGTAGCAGGTTAATGAGGAAAATTATC 57.656 33.333 0.00 0.00 0.00 1.75
3297 3906 8.950403 AGTTGCTATAAAAATGACGAGAAAAC 57.050 30.769 0.00 0.00 0.00 2.43
3329 3938 0.462759 GCCTTCTTCGTGGATCCCAG 60.463 60.000 9.90 2.97 32.34 4.45
3514 4123 3.196685 ACAGAACTCACTAGGCTCATTCC 59.803 47.826 0.00 0.00 0.00 3.01
3535 4144 6.985188 TCCTAGCAAATGAACTGTGATTAC 57.015 37.500 0.00 0.00 0.00 1.89
3544 4153 6.312918 TCGTATCAACTTCCTAGCAAATGAAC 59.687 38.462 0.00 0.00 0.00 3.18
3548 4157 7.681939 TTTTCGTATCAACTTCCTAGCAAAT 57.318 32.000 0.00 0.00 0.00 2.32
3584 4193 4.504858 GGAGCTCGATCAGAAAAACCTTA 58.495 43.478 7.83 0.00 0.00 2.69
3585 4194 3.339141 GGAGCTCGATCAGAAAAACCTT 58.661 45.455 7.83 0.00 0.00 3.50
3586 4195 2.355209 GGGAGCTCGATCAGAAAAACCT 60.355 50.000 7.83 0.00 0.00 3.50
3616 4225 0.396435 TGGTGGTGTTGCTCCTACAG 59.604 55.000 0.00 0.00 0.00 2.74
3723 4332 4.709397 TCAACAGGAGTGAAATGTTTTGGT 59.291 37.500 0.00 0.00 35.04 3.67
3724 4333 5.261209 TCAACAGGAGTGAAATGTTTTGG 57.739 39.130 0.00 0.00 35.04 3.28
3725 4334 9.480053 AATATTCAACAGGAGTGAAATGTTTTG 57.520 29.630 0.00 0.00 35.04 2.44
3729 4338 9.911788 AGATAATATTCAACAGGAGTGAAATGT 57.088 29.630 0.00 0.00 0.00 2.71
3732 4341 9.739276 ACAAGATAATATTCAACAGGAGTGAAA 57.261 29.630 0.00 0.00 0.00 2.69
3733 4342 9.166173 CACAAGATAATATTCAACAGGAGTGAA 57.834 33.333 0.00 0.00 0.00 3.18
3734 4343 8.321353 ACACAAGATAATATTCAACAGGAGTGA 58.679 33.333 0.00 0.00 0.00 3.41
3735 4344 8.393366 CACACAAGATAATATTCAACAGGAGTG 58.607 37.037 0.00 0.00 0.00 3.51
3736 4345 8.103305 ACACACAAGATAATATTCAACAGGAGT 58.897 33.333 0.00 0.00 0.00 3.85
3737 4346 8.498054 ACACACAAGATAATATTCAACAGGAG 57.502 34.615 0.00 0.00 0.00 3.69
3738 4347 9.378551 GTACACACAAGATAATATTCAACAGGA 57.621 33.333 0.00 0.00 0.00 3.86
3739 4348 8.612619 GGTACACACAAGATAATATTCAACAGG 58.387 37.037 0.00 0.00 0.00 4.00
3740 4349 9.161629 TGGTACACACAAGATAATATTCAACAG 57.838 33.333 0.00 0.00 0.00 3.16
3790 4399 6.392354 CAAGTTTCATGTGCAGGTTCAATAT 58.608 36.000 0.00 0.00 0.00 1.28
3791 4400 5.278907 CCAAGTTTCATGTGCAGGTTCAATA 60.279 40.000 0.00 0.00 0.00 1.90
3997 4608 7.645402 TCAATTTGCTTATATCTCACAGCATG 58.355 34.615 0.00 0.00 41.80 4.06
3999 4610 7.283807 ACATCAATTTGCTTATATCTCACAGCA 59.716 33.333 0.00 0.00 40.53 4.41
4001 4612 9.447040 CAACATCAATTTGCTTATATCTCACAG 57.553 33.333 0.00 0.00 0.00 3.66
4002 4613 9.176460 TCAACATCAATTTGCTTATATCTCACA 57.824 29.630 0.00 0.00 0.00 3.58
4173 4808 3.399440 AAGAGCAACTCTCACCTCTTG 57.601 47.619 0.00 0.00 44.35 3.02
4188 4823 2.191128 ACTCCCATGTCACAAAGAGC 57.809 50.000 2.76 0.00 0.00 4.09
4215 4850 6.369065 AGCTTAAACACTAGATTTTCACTCGG 59.631 38.462 0.00 0.00 0.00 4.63
4249 4888 2.489938 TCCTGCATGTTAGGACAACC 57.510 50.000 14.51 0.00 39.36 3.77
4362 5002 3.910170 GCGATGCACATATTTGTATGCAG 59.090 43.478 3.96 0.00 37.94 4.41
4366 5010 5.704978 TGGTATGCGATGCACATATTTGTAT 59.295 36.000 0.00 0.00 43.04 2.29
4376 5020 0.098728 GGTTGTGGTATGCGATGCAC 59.901 55.000 0.00 0.00 43.04 4.57
4382 5026 0.109781 GCACTTGGTTGTGGTATGCG 60.110 55.000 0.00 0.00 38.31 4.73
4385 5029 3.153369 TGATGCACTTGGTTGTGGTAT 57.847 42.857 0.00 0.00 38.31 2.73
4437 5081 6.423862 TCATATTGTTTACGCTTTTATCCGC 58.576 36.000 0.00 0.00 0.00 5.54
4447 5091 3.936902 TCCGCTTCATATTGTTTACGC 57.063 42.857 0.00 0.00 0.00 4.42
4448 5092 6.964370 TGAATTTCCGCTTCATATTGTTTACG 59.036 34.615 0.00 0.00 0.00 3.18
4449 5093 8.181573 TCTGAATTTCCGCTTCATATTGTTTAC 58.818 33.333 0.00 0.00 32.50 2.01
4450 5094 8.275015 TCTGAATTTCCGCTTCATATTGTTTA 57.725 30.769 0.00 0.00 32.50 2.01
4451 5095 7.156876 TCTGAATTTCCGCTTCATATTGTTT 57.843 32.000 0.00 0.00 32.50 2.83
4452 5096 6.757897 TCTGAATTTCCGCTTCATATTGTT 57.242 33.333 0.00 0.00 32.50 2.83
4453 5097 6.769822 AGATCTGAATTTCCGCTTCATATTGT 59.230 34.615 0.00 0.00 32.50 2.71
4454 5098 7.199541 AGATCTGAATTTCCGCTTCATATTG 57.800 36.000 0.00 0.00 32.50 1.90
4455 5099 8.153550 ACTAGATCTGAATTTCCGCTTCATATT 58.846 33.333 5.18 0.00 32.50 1.28
4456 5100 7.675062 ACTAGATCTGAATTTCCGCTTCATAT 58.325 34.615 5.18 0.00 32.50 1.78
4457 5101 7.055667 ACTAGATCTGAATTTCCGCTTCATA 57.944 36.000 5.18 0.00 32.50 2.15
4477 5132 9.177608 TGGGAAATCAAACAGATTCATTACTAG 57.822 33.333 0.00 0.00 46.09 2.57
4478 5133 9.699410 ATGGGAAATCAAACAGATTCATTACTA 57.301 29.630 0.00 0.00 46.09 1.82
4624 5279 2.413310 AACAAACAACCCACGTCTCT 57.587 45.000 0.00 0.00 0.00 3.10
4625 5280 3.497297 AAAACAAACAACCCACGTCTC 57.503 42.857 0.00 0.00 0.00 3.36
4646 5301 2.364970 CCACAGCCCTGTTTTCATCAAA 59.635 45.455 0.00 0.00 42.83 2.69
4647 5302 1.962807 CCACAGCCCTGTTTTCATCAA 59.037 47.619 0.00 0.00 42.83 2.57
4648 5303 1.619654 CCACAGCCCTGTTTTCATCA 58.380 50.000 0.00 0.00 42.83 3.07
4649 5304 0.244721 GCCACAGCCCTGTTTTCATC 59.755 55.000 0.00 0.00 42.83 2.92
4650 5305 2.354902 GCCACAGCCCTGTTTTCAT 58.645 52.632 0.00 0.00 42.83 2.57
4727 5382 1.298157 TGTCAGCAATGTACGCCTGC 61.298 55.000 5.70 5.70 36.29 4.85
4741 5396 0.734253 GTGAGCTGCGTACCTGTCAG 60.734 60.000 0.00 0.00 0.00 3.51
4751 5406 4.151335 GTGGAATTAGATATGTGAGCTGCG 59.849 45.833 0.00 0.00 0.00 5.18
4769 5424 3.300852 TCGTACTACGCATTTGTGGAA 57.699 42.857 3.57 0.00 42.21 3.53
4784 5439 3.064931 CTGGTTTTGGGAGAGTTCGTAC 58.935 50.000 0.00 0.00 0.00 3.67
4818 5473 0.178767 CAATCATGAGTGAGCGGGGA 59.821 55.000 18.07 0.00 37.87 4.81
4822 5477 1.329906 GGAAGCAATCATGAGTGAGCG 59.670 52.381 26.30 0.31 37.87 5.03
4823 5478 1.329906 CGGAAGCAATCATGAGTGAGC 59.670 52.381 26.30 12.13 37.87 4.26
4824 5479 2.625737 ACGGAAGCAATCATGAGTGAG 58.374 47.619 26.30 12.89 37.87 3.51
4825 5480 2.768253 ACGGAAGCAATCATGAGTGA 57.232 45.000 26.30 0.00 39.04 3.41
4843 5498 1.528807 GCAAAGCACCGCAAACAAAAC 60.529 47.619 0.00 0.00 0.00 2.43
4846 5501 0.527385 GAGCAAAGCACCGCAAACAA 60.527 50.000 0.00 0.00 0.00 2.83
4848 5503 0.936297 CTGAGCAAAGCACCGCAAAC 60.936 55.000 0.00 0.00 0.00 2.93
4849 5504 1.359833 CTGAGCAAAGCACCGCAAA 59.640 52.632 0.00 0.00 0.00 3.68
4852 5507 4.410743 GGCTGAGCAAAGCACCGC 62.411 66.667 6.82 0.00 45.43 5.68
4853 5508 2.467946 CTTGGCTGAGCAAAGCACCG 62.468 60.000 8.90 0.00 45.43 4.94
4958 5613 0.036010 ACCGCTTCTCCATCAGGTTG 60.036 55.000 0.00 0.00 35.89 3.77
5025 5680 2.289002 GGGATCATCATCGTTGTTCAGC 59.711 50.000 0.00 0.00 0.00 4.26
5031 5686 0.603707 CCGGGGGATCATCATCGTTG 60.604 60.000 0.00 0.00 0.00 4.10
5033 5688 2.217038 CCCGGGGGATCATCATCGT 61.217 63.158 14.71 0.00 37.50 3.73
5034 5689 1.768684 AACCCGGGGGATCATCATCG 61.769 60.000 27.92 0.00 38.96 3.84
5035 5690 0.478507 AAACCCGGGGGATCATCATC 59.521 55.000 27.92 0.00 38.96 2.92
5049 5705 1.341209 CTCTTGTCAAAGCCCAAACCC 59.659 52.381 0.00 0.00 33.06 4.11
5052 5708 1.682854 CTGCTCTTGTCAAAGCCCAAA 59.317 47.619 13.63 0.30 37.73 3.28
5053 5709 1.321474 CTGCTCTTGTCAAAGCCCAA 58.679 50.000 13.63 0.00 37.73 4.12
5054 5710 1.174712 GCTGCTCTTGTCAAAGCCCA 61.175 55.000 13.63 1.06 37.73 5.36
5055 5711 1.174712 TGCTGCTCTTGTCAAAGCCC 61.175 55.000 13.63 8.04 37.73 5.19
5056 5712 0.240411 CTGCTGCTCTTGTCAAAGCC 59.760 55.000 13.63 4.37 37.73 4.35
5057 5713 0.386985 GCTGCTGCTCTTGTCAAAGC 60.387 55.000 8.53 10.85 39.02 3.51
5058 5714 0.949397 TGCTGCTGCTCTTGTCAAAG 59.051 50.000 17.00 0.00 40.48 2.77
5169 5837 0.461870 TTGTTGTCTGCTGCTGTCGT 60.462 50.000 0.00 0.00 0.00 4.34
5178 5846 5.996219 TGTATGTACATGTTTGTTGTCTGC 58.004 37.500 18.81 0.00 37.28 4.26
5181 5849 9.420966 CGAATATGTATGTACATGTTTGTTGTC 57.579 33.333 18.81 5.60 44.49 3.18
5221 5907 5.360999 AGTCTCAAATACGATGATGACCTGA 59.639 40.000 0.00 0.00 31.28 3.86
5222 5908 5.595885 AGTCTCAAATACGATGATGACCTG 58.404 41.667 0.00 0.00 31.28 4.00
5223 5909 5.596361 AGAGTCTCAAATACGATGATGACCT 59.404 40.000 1.94 0.00 31.28 3.85
5224 5910 5.689514 CAGAGTCTCAAATACGATGATGACC 59.310 44.000 1.94 0.00 31.28 4.02
5225 5911 6.269315 ACAGAGTCTCAAATACGATGATGAC 58.731 40.000 1.94 0.00 0.00 3.06
5228 5914 8.001881 AGTAACAGAGTCTCAAATACGATGAT 57.998 34.615 1.94 0.00 0.00 2.45
5236 5922 7.526142 TGTACAGAGTAACAGAGTCTCAAAT 57.474 36.000 1.94 0.00 35.49 2.32
5238 5924 7.664318 TGTATGTACAGAGTAACAGAGTCTCAA 59.336 37.037 0.33 0.00 35.49 3.02
5244 5930 8.812147 TTGTTTGTATGTACAGAGTAACAGAG 57.188 34.615 13.72 0.00 35.73 3.35
5267 5953 7.620365 ACGGTCGTTCGTACAAAACTGTTTG 62.620 44.000 6.53 4.15 41.68 2.93
5268 5954 3.242059 CGGTCGTTCGTACAAAACTGTTT 60.242 43.478 0.00 0.00 0.00 2.83
5269 5955 2.282290 CGGTCGTTCGTACAAAACTGTT 59.718 45.455 6.57 0.00 0.00 3.16
5310 6000 9.394477 CATCACTCACTCGTCGATATTATAAAA 57.606 33.333 0.00 0.00 0.00 1.52
5358 6058 4.908601 AGAATCACATGTGTGGTAGGAA 57.091 40.909 24.63 3.87 45.65 3.36
5359 6059 4.908601 AAGAATCACATGTGTGGTAGGA 57.091 40.909 24.63 4.64 45.65 2.94
5360 6060 5.003160 TCAAAGAATCACATGTGTGGTAGG 58.997 41.667 24.63 10.82 45.65 3.18
5361 6061 6.149973 ACATCAAAGAATCACATGTGTGGTAG 59.850 38.462 24.63 10.55 45.65 3.18
5362 6062 6.003326 ACATCAAAGAATCACATGTGTGGTA 58.997 36.000 24.63 6.58 45.65 3.25
5363 6063 4.828939 ACATCAAAGAATCACATGTGTGGT 59.171 37.500 24.63 8.68 45.65 4.16
5364 6064 5.182570 AGACATCAAAGAATCACATGTGTGG 59.817 40.000 24.63 3.61 45.65 4.17
5365 6065 6.084277 CAGACATCAAAGAATCACATGTGTG 58.916 40.000 24.63 14.62 46.91 3.82
5366 6066 5.335426 GCAGACATCAAAGAATCACATGTGT 60.335 40.000 24.63 7.23 0.00 3.72
5385 6085 7.315142 TCATCATAAAGAAACCAAATGCAGAC 58.685 34.615 0.00 0.00 0.00 3.51
5386 6086 7.465353 TCATCATAAAGAAACCAAATGCAGA 57.535 32.000 0.00 0.00 0.00 4.26
5398 6098 9.511272 CATCACAAGGGATATCATCATAAAGAA 57.489 33.333 4.83 0.00 0.00 2.52
5402 6102 8.219868 ACAACATCACAAGGGATATCATCATAA 58.780 33.333 4.83 0.00 0.00 1.90
5406 6106 6.949352 AACAACATCACAAGGGATATCATC 57.051 37.500 4.83 0.00 0.00 2.92
5407 6107 7.067859 CAGAAACAACATCACAAGGGATATCAT 59.932 37.037 4.83 0.00 0.00 2.45
5408 6108 6.375174 CAGAAACAACATCACAAGGGATATCA 59.625 38.462 4.83 0.00 0.00 2.15
5409 6109 6.599244 TCAGAAACAACATCACAAGGGATATC 59.401 38.462 0.00 0.00 0.00 1.63
5410 6110 6.484288 TCAGAAACAACATCACAAGGGATAT 58.516 36.000 0.00 0.00 0.00 1.63
5411 6111 5.875224 TCAGAAACAACATCACAAGGGATA 58.125 37.500 0.00 0.00 0.00 2.59
5412 6112 4.728772 TCAGAAACAACATCACAAGGGAT 58.271 39.130 0.00 0.00 0.00 3.85
5413 6113 4.163441 TCAGAAACAACATCACAAGGGA 57.837 40.909 0.00 0.00 0.00 4.20
5414 6114 4.321452 CCATCAGAAACAACATCACAAGGG 60.321 45.833 0.00 0.00 0.00 3.95
5415 6115 4.279169 ACCATCAGAAACAACATCACAAGG 59.721 41.667 0.00 0.00 0.00 3.61
5416 6116 5.008911 TCACCATCAGAAACAACATCACAAG 59.991 40.000 0.00 0.00 0.00 3.16
5418 6118 4.459330 TCACCATCAGAAACAACATCACA 58.541 39.130 0.00 0.00 0.00 3.58
5419 6119 5.009010 ACTTCACCATCAGAAACAACATCAC 59.991 40.000 0.00 0.00 0.00 3.06
5422 6122 6.469782 AAACTTCACCATCAGAAACAACAT 57.530 33.333 0.00 0.00 0.00 2.71
5441 6158 4.079253 ACGACATCAAGGCCATAAAAACT 58.921 39.130 5.01 0.00 0.00 2.66
5480 6197 0.604780 CCAACCAGTGTCAGCTCCTG 60.605 60.000 0.00 0.00 0.00 3.86
5485 6202 2.113986 AGCCCAACCAGTGTCAGC 59.886 61.111 0.00 0.00 0.00 4.26
5486 6203 1.601759 CCAGCCCAACCAGTGTCAG 60.602 63.158 0.00 0.00 0.00 3.51
5489 6206 0.540365 CATTCCAGCCCAACCAGTGT 60.540 55.000 0.00 0.00 0.00 3.55
5509 6226 1.948611 GCCTTTACTCCGTGCATCCAA 60.949 52.381 0.00 0.00 0.00 3.53
5514 6233 0.605319 CCTTGCCTTTACTCCGTGCA 60.605 55.000 0.00 0.00 0.00 4.57
5525 6244 1.537152 AATGCCCTTGCCTTGCCTT 60.537 52.632 0.00 0.00 36.33 4.35
5526 6245 2.121162 AATGCCCTTGCCTTGCCT 59.879 55.556 0.00 0.00 36.33 4.75
5527 6246 1.829523 TTCAATGCCCTTGCCTTGCC 61.830 55.000 0.00 0.00 41.29 4.52
5528 6247 0.390735 CTTCAATGCCCTTGCCTTGC 60.391 55.000 0.00 0.00 41.29 4.01
5529 6248 0.971386 ACTTCAATGCCCTTGCCTTG 59.029 50.000 0.00 0.00 42.42 3.61
5560 6283 9.987272 TCGTACTACATCAAGCTAGTAATAGTA 57.013 33.333 0.00 0.00 29.27 1.82
5576 6302 2.423947 CCTACACCCCCTCGTACTACAT 60.424 54.545 0.00 0.00 0.00 2.29
5577 6303 1.064463 CCTACACCCCCTCGTACTACA 60.064 57.143 0.00 0.00 0.00 2.74
5634 6362 2.037251 TCTCTCCTTTCTTTCCACCGTG 59.963 50.000 0.00 0.00 0.00 4.94
5657 6385 2.751806 AGAACCGACCTTTACTACTCCG 59.248 50.000 0.00 0.00 0.00 4.63
5662 6392 4.557296 CGTTGTCAGAACCGACCTTTACTA 60.557 45.833 0.00 0.00 34.88 1.82
5683 6413 3.704566 TCCTTGAGGCTACATTACATCGT 59.295 43.478 0.00 0.00 34.44 3.73
5685 6415 5.428253 TGTTCCTTGAGGCTACATTACATC 58.572 41.667 0.00 0.00 34.44 3.06
5696 6426 2.361737 GGCCCTGTTCCTTGAGGC 60.362 66.667 0.00 0.00 43.09 4.70
5734 6469 2.746269 CAAGGACGAAAACGGTACTGA 58.254 47.619 9.17 0.00 0.00 3.41
5751 6490 2.605580 GCGGACCAAGAAAGAAAGCAAG 60.606 50.000 0.00 0.00 0.00 4.01
5753 6492 0.951558 GCGGACCAAGAAAGAAAGCA 59.048 50.000 0.00 0.00 0.00 3.91
5775 6518 4.439305 TTATGTTTGCTTGATCAGTGCC 57.561 40.909 16.63 5.77 0.00 5.01
5782 6525 6.543831 GGTGAGACCTATTATGTTTGCTTGAT 59.456 38.462 0.00 0.00 34.73 2.57
5783 6526 5.880332 GGTGAGACCTATTATGTTTGCTTGA 59.120 40.000 0.00 0.00 34.73 3.02
5784 6527 6.124088 GGTGAGACCTATTATGTTTGCTTG 57.876 41.667 0.00 0.00 34.73 4.01
5795 6538 7.420913 TGTTTTGAAACCTAGGTGAGACCTATT 60.421 37.037 17.14 2.62 41.64 1.73
5796 6539 6.043938 TGTTTTGAAACCTAGGTGAGACCTAT 59.956 38.462 17.14 0.00 41.64 2.57
5797 6540 5.367352 TGTTTTGAAACCTAGGTGAGACCTA 59.633 40.000 17.14 2.54 41.64 3.08
5798 6541 4.165372 TGTTTTGAAACCTAGGTGAGACCT 59.835 41.667 17.14 0.00 43.90 3.85
5799 6542 4.457466 TGTTTTGAAACCTAGGTGAGACC 58.543 43.478 17.14 3.86 38.11 3.85
5800 6543 6.438763 CATTGTTTTGAAACCTAGGTGAGAC 58.561 40.000 17.14 9.34 38.11 3.36
5801 6544 5.534654 CCATTGTTTTGAAACCTAGGTGAGA 59.465 40.000 17.14 0.00 38.11 3.27
5802 6545 5.301805 ACCATTGTTTTGAAACCTAGGTGAG 59.698 40.000 17.14 0.00 38.11 3.51
5803 6546 5.205056 ACCATTGTTTTGAAACCTAGGTGA 58.795 37.500 17.14 0.00 38.11 4.02
5804 6547 5.529581 ACCATTGTTTTGAAACCTAGGTG 57.470 39.130 17.14 0.00 38.11 4.00
5805 6548 6.370453 AGTACCATTGTTTTGAAACCTAGGT 58.630 36.000 9.21 9.21 38.11 3.08
5806 6549 6.894339 AGTACCATTGTTTTGAAACCTAGG 57.106 37.500 7.41 7.41 38.11 3.02
5807 6550 7.385752 TCGTAGTACCATTGTTTTGAAACCTAG 59.614 37.037 4.32 0.00 38.11 3.02
5808 6551 7.215789 TCGTAGTACCATTGTTTTGAAACCTA 58.784 34.615 4.32 0.00 38.11 3.08
5809 6552 6.056884 TCGTAGTACCATTGTTTTGAAACCT 58.943 36.000 4.32 0.00 38.11 3.50
5810 6553 6.303021 TCGTAGTACCATTGTTTTGAAACC 57.697 37.500 4.32 0.00 38.11 3.27
5811 6554 8.687301 CATTTCGTAGTACCATTGTTTTGAAAC 58.313 33.333 0.00 0.00 39.33 2.78
5812 6555 8.407064 ACATTTCGTAGTACCATTGTTTTGAAA 58.593 29.630 0.00 0.00 0.00 2.69
5813 6556 7.932335 ACATTTCGTAGTACCATTGTTTTGAA 58.068 30.769 0.00 0.00 0.00 2.69
5814 6557 7.499321 ACATTTCGTAGTACCATTGTTTTGA 57.501 32.000 0.00 0.00 0.00 2.69
5815 6558 7.646130 ACAACATTTCGTAGTACCATTGTTTTG 59.354 33.333 0.00 0.00 0.00 2.44
5816 6559 7.708998 ACAACATTTCGTAGTACCATTGTTTT 58.291 30.769 0.00 0.00 0.00 2.43
5817 6560 7.266922 ACAACATTTCGTAGTACCATTGTTT 57.733 32.000 0.00 0.00 0.00 2.83
5818 6561 6.870971 ACAACATTTCGTAGTACCATTGTT 57.129 33.333 0.00 0.00 0.00 2.83
5819 6562 6.930164 TGTACAACATTTCGTAGTACCATTGT 59.070 34.615 0.00 0.00 35.41 2.71
5820 6563 7.329962 TCTGTACAACATTTCGTAGTACCATTG 59.670 37.037 0.00 0.00 35.41 2.82
5821 6564 7.380536 TCTGTACAACATTTCGTAGTACCATT 58.619 34.615 0.00 0.00 35.41 3.16
5822 6565 6.927416 TCTGTACAACATTTCGTAGTACCAT 58.073 36.000 0.00 0.00 35.41 3.55
5823 6566 6.330004 TCTGTACAACATTTCGTAGTACCA 57.670 37.500 0.00 0.00 35.41 3.25
5824 6567 7.672738 CAATCTGTACAACATTTCGTAGTACC 58.327 38.462 0.00 0.00 35.41 3.34
5825 6568 7.063074 AGCAATCTGTACAACATTTCGTAGTAC 59.937 37.037 0.00 0.00 36.49 2.73
5826 6569 7.094631 AGCAATCTGTACAACATTTCGTAGTA 58.905 34.615 0.00 0.00 0.00 1.82
5827 6570 5.932303 AGCAATCTGTACAACATTTCGTAGT 59.068 36.000 0.00 0.00 0.00 2.73
5828 6571 6.408858 AGCAATCTGTACAACATTTCGTAG 57.591 37.500 0.00 0.00 0.00 3.51
5829 6572 6.795098 AAGCAATCTGTACAACATTTCGTA 57.205 33.333 0.00 0.00 0.00 3.43
5830 6573 5.689383 AAGCAATCTGTACAACATTTCGT 57.311 34.783 0.00 0.00 0.00 3.85
5831 6574 7.298122 ACTTAAGCAATCTGTACAACATTTCG 58.702 34.615 1.29 0.00 0.00 3.46
5832 6575 8.905702 CAACTTAAGCAATCTGTACAACATTTC 58.094 33.333 1.29 0.00 0.00 2.17
5833 6576 8.413229 ACAACTTAAGCAATCTGTACAACATTT 58.587 29.630 1.29 0.00 0.00 2.32
5834 6577 7.940850 ACAACTTAAGCAATCTGTACAACATT 58.059 30.769 1.29 0.00 0.00 2.71
5835 6578 7.510549 ACAACTTAAGCAATCTGTACAACAT 57.489 32.000 1.29 0.00 0.00 2.71
5836 6579 6.935741 ACAACTTAAGCAATCTGTACAACA 57.064 33.333 1.29 0.00 0.00 3.33
5837 6580 8.084590 AGTACAACTTAAGCAATCTGTACAAC 57.915 34.615 21.65 8.78 40.88 3.32
5838 6581 9.199982 GTAGTACAACTTAAGCAATCTGTACAA 57.800 33.333 21.65 0.00 40.88 2.41
5839 6582 8.582437 AGTAGTACAACTTAAGCAATCTGTACA 58.418 33.333 21.65 0.00 40.88 2.90
5840 6583 8.983307 AGTAGTACAACTTAAGCAATCTGTAC 57.017 34.615 16.66 16.66 39.46 2.90
5841 6584 8.248945 GGAGTAGTACAACTTAAGCAATCTGTA 58.751 37.037 1.29 0.76 0.00 2.74
5842 6585 7.097834 GGAGTAGTACAACTTAAGCAATCTGT 58.902 38.462 1.29 1.68 0.00 3.41
5843 6586 6.253727 CGGAGTAGTACAACTTAAGCAATCTG 59.746 42.308 1.29 0.00 0.00 2.90
5844 6587 6.071503 ACGGAGTAGTACAACTTAAGCAATCT 60.072 38.462 1.29 0.00 41.94 2.40
5845 6588 6.098017 ACGGAGTAGTACAACTTAAGCAATC 58.902 40.000 1.29 0.00 41.94 2.67
5846 6589 6.034161 ACGGAGTAGTACAACTTAAGCAAT 57.966 37.500 1.29 0.00 41.94 3.56
5847 6590 5.458041 ACGGAGTAGTACAACTTAAGCAA 57.542 39.130 1.29 0.00 41.94 3.91
5848 6591 5.458041 AACGGAGTAGTACAACTTAAGCA 57.542 39.130 1.29 0.00 45.00 3.91
5849 6592 6.775939 AAAACGGAGTAGTACAACTTAAGC 57.224 37.500 1.29 0.00 45.00 3.09
5850 6593 8.271487 GTCAAAAACGGAGTAGTACAACTTAAG 58.729 37.037 0.00 0.00 45.00 1.85
5851 6594 7.763528 TGTCAAAAACGGAGTAGTACAACTTAA 59.236 33.333 2.52 0.00 45.00 1.85
5852 6595 7.222611 GTGTCAAAAACGGAGTAGTACAACTTA 59.777 37.037 2.52 0.00 45.00 2.24
5853 6596 6.036408 GTGTCAAAAACGGAGTAGTACAACTT 59.964 38.462 2.52 0.00 45.00 2.66
5854 6597 5.521372 GTGTCAAAAACGGAGTAGTACAACT 59.479 40.000 2.52 0.00 45.00 3.16
5855 6598 5.521372 AGTGTCAAAAACGGAGTAGTACAAC 59.479 40.000 2.52 0.00 45.00 3.32
5856 6599 5.663456 AGTGTCAAAAACGGAGTAGTACAA 58.337 37.500 2.52 0.00 45.00 2.41
5857 6600 5.266733 AGTGTCAAAAACGGAGTAGTACA 57.733 39.130 2.52 0.00 45.00 2.90
5858 6601 5.750067 TCAAGTGTCAAAAACGGAGTAGTAC 59.250 40.000 0.00 0.00 45.00 2.73
5859 6602 5.904941 TCAAGTGTCAAAAACGGAGTAGTA 58.095 37.500 0.00 0.00 45.00 1.82
5860 6603 4.761975 TCAAGTGTCAAAAACGGAGTAGT 58.238 39.130 0.00 0.00 45.00 2.73
5861 6604 5.728351 TTCAAGTGTCAAAAACGGAGTAG 57.272 39.130 0.00 0.00 45.00 2.57
5862 6605 5.644636 ACTTTCAAGTGTCAAAAACGGAGTA 59.355 36.000 0.00 0.00 37.64 2.59
5863 6606 4.457949 ACTTTCAAGTGTCAAAAACGGAGT 59.542 37.500 0.00 0.00 39.91 3.85
5864 6607 4.981794 ACTTTCAAGTGTCAAAAACGGAG 58.018 39.130 0.00 0.00 37.98 4.63
5877 6620 6.009115 ACGTTCTTTTTGACACTTTCAAGT 57.991 33.333 0.00 0.00 45.22 3.16
5878 6621 6.314784 AGACGTTCTTTTTGACACTTTCAAG 58.685 36.000 0.00 0.00 45.22 3.02
5879 6622 6.249035 AGACGTTCTTTTTGACACTTTCAA 57.751 33.333 0.00 0.00 42.83 2.69
5880 6623 5.873179 AGACGTTCTTTTTGACACTTTCA 57.127 34.783 0.00 0.00 0.00 2.69
5884 6627 9.878599 CAAATATAAGACGTTCTTTTTGACACT 57.121 29.630 12.81 0.00 35.40 3.55
5885 6628 9.113876 CCAAATATAAGACGTTCTTTTTGACAC 57.886 33.333 16.42 0.00 35.40 3.67
5886 6629 8.293867 CCCAAATATAAGACGTTCTTTTTGACA 58.706 33.333 16.42 0.00 35.40 3.58
5887 6630 8.508875 TCCCAAATATAAGACGTTCTTTTTGAC 58.491 33.333 16.42 0.00 35.40 3.18
5888 6631 8.624367 TCCCAAATATAAGACGTTCTTTTTGA 57.376 30.769 16.42 4.49 35.40 2.69
5889 6632 8.512138 ACTCCCAAATATAAGACGTTCTTTTTG 58.488 33.333 5.74 9.50 37.89 2.44
5890 6633 8.631480 ACTCCCAAATATAAGACGTTCTTTTT 57.369 30.769 5.74 0.02 37.89 1.94
5891 6634 9.729281 TTACTCCCAAATATAAGACGTTCTTTT 57.271 29.630 5.74 2.08 37.89 2.27
5892 6635 9.901172 ATTACTCCCAAATATAAGACGTTCTTT 57.099 29.630 5.74 0.00 37.89 2.52
5893 6636 9.901172 AATTACTCCCAAATATAAGACGTTCTT 57.099 29.630 0.00 0.00 40.35 2.52
5894 6637 9.543783 GAATTACTCCCAAATATAAGACGTTCT 57.456 33.333 0.00 0.00 0.00 3.01
5895 6638 9.543783 AGAATTACTCCCAAATATAAGACGTTC 57.456 33.333 0.00 0.00 0.00 3.95
5896 6639 9.901172 AAGAATTACTCCCAAATATAAGACGTT 57.099 29.630 0.00 0.00 0.00 3.99
5897 6640 9.901172 AAAGAATTACTCCCAAATATAAGACGT 57.099 29.630 0.00 0.00 0.00 4.34
5911 6654 9.916360 TTTAGGATTTAGGGAAAGAATTACTCC 57.084 33.333 0.00 0.00 0.00 3.85
5916 6659 9.244292 GTCAGTTTAGGATTTAGGGAAAGAATT 57.756 33.333 0.00 0.00 0.00 2.17
5917 6660 8.390921 TGTCAGTTTAGGATTTAGGGAAAGAAT 58.609 33.333 0.00 0.00 0.00 2.40
5918 6661 7.751646 TGTCAGTTTAGGATTTAGGGAAAGAA 58.248 34.615 0.00 0.00 0.00 2.52
5919 6662 7.324388 TGTCAGTTTAGGATTTAGGGAAAGA 57.676 36.000 0.00 0.00 0.00 2.52
5920 6663 8.581253 AATGTCAGTTTAGGATTTAGGGAAAG 57.419 34.615 0.00 0.00 0.00 2.62
5921 6664 8.950007 AAATGTCAGTTTAGGATTTAGGGAAA 57.050 30.769 0.00 0.00 0.00 3.13
5922 6665 7.614192 GGAAATGTCAGTTTAGGATTTAGGGAA 59.386 37.037 0.00 0.00 0.00 3.97
5923 6666 7.116736 GGAAATGTCAGTTTAGGATTTAGGGA 58.883 38.462 0.00 0.00 0.00 4.20
5924 6667 6.321435 GGGAAATGTCAGTTTAGGATTTAGGG 59.679 42.308 0.00 0.00 0.00 3.53
5925 6668 6.038271 CGGGAAATGTCAGTTTAGGATTTAGG 59.962 42.308 0.00 0.00 0.00 2.69
5926 6669 6.458342 GCGGGAAATGTCAGTTTAGGATTTAG 60.458 42.308 0.00 0.00 0.00 1.85
5927 6670 5.355910 GCGGGAAATGTCAGTTTAGGATTTA 59.644 40.000 0.00 0.00 0.00 1.40
5928 6671 4.157840 GCGGGAAATGTCAGTTTAGGATTT 59.842 41.667 0.00 0.00 0.00 2.17
5929 6672 3.694566 GCGGGAAATGTCAGTTTAGGATT 59.305 43.478 0.00 0.00 0.00 3.01
5930 6673 3.279434 GCGGGAAATGTCAGTTTAGGAT 58.721 45.455 0.00 0.00 0.00 3.24
5931 6674 2.039216 TGCGGGAAATGTCAGTTTAGGA 59.961 45.455 0.00 0.00 0.00 2.94
5932 6675 2.432444 TGCGGGAAATGTCAGTTTAGG 58.568 47.619 0.00 0.00 0.00 2.69
5933 6676 4.497473 TTTGCGGGAAATGTCAGTTTAG 57.503 40.909 0.00 0.00 0.00 1.85
5934 6677 4.920640 TTTTGCGGGAAATGTCAGTTTA 57.079 36.364 0.00 0.00 0.00 2.01
5935 6678 3.810310 TTTTGCGGGAAATGTCAGTTT 57.190 38.095 0.00 0.00 0.00 2.66
5936 6679 3.810310 TTTTTGCGGGAAATGTCAGTT 57.190 38.095 0.00 0.00 0.00 3.16
5955 6698 9.379791 CGGACTATGTTAGTTTAGGATTCTTTT 57.620 33.333 0.00 0.00 39.59 2.27
5956 6699 8.755977 TCGGACTATGTTAGTTTAGGATTCTTT 58.244 33.333 0.00 0.00 39.59 2.52
5957 6700 8.302515 TCGGACTATGTTAGTTTAGGATTCTT 57.697 34.615 0.00 0.00 39.59 2.52
5958 6701 7.893124 TCGGACTATGTTAGTTTAGGATTCT 57.107 36.000 0.00 0.00 39.59 2.40
5959 6702 8.937634 TTTCGGACTATGTTAGTTTAGGATTC 57.062 34.615 0.00 0.00 39.59 2.52
5960 6703 9.729281 TTTTTCGGACTATGTTAGTTTAGGATT 57.271 29.630 0.00 0.00 39.59 3.01
5961 6704 9.379791 CTTTTTCGGACTATGTTAGTTTAGGAT 57.620 33.333 0.00 0.00 39.59 3.24
5962 6705 8.587608 TCTTTTTCGGACTATGTTAGTTTAGGA 58.412 33.333 0.00 0.00 39.59 2.94
5963 6706 8.767478 TCTTTTTCGGACTATGTTAGTTTAGG 57.233 34.615 0.00 0.00 39.59 2.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.