Multiple sequence alignment - TraesCS5B01G532100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G532100 chr5B 100.000 3737 0 0 1 3737 689869371 689865635 0.000000e+00 6902.0
1 TraesCS5B01G532100 chr5D 90.815 3005 184 39 779 3737 546681214 546678256 0.000000e+00 3936.0
2 TraesCS5B01G532100 chr4A 91.137 2110 130 21 773 2855 622275195 622277274 0.000000e+00 2808.0
3 TraesCS5B01G532100 chr4A 82.545 275 33 7 3430 3689 622281254 622281528 1.040000e-55 228.0
4 TraesCS5B01G532100 chr6D 82.595 1310 159 30 1164 2434 460375792 460374513 0.000000e+00 1092.0
5 TraesCS5B01G532100 chr6D 81.299 385 55 13 306 678 372925546 372925167 2.820000e-76 296.0
6 TraesCS5B01G532100 chr6A 78.049 1066 144 41 988 2025 606446099 606445096 1.160000e-164 590.0
7 TraesCS5B01G532100 chr7B 83.072 319 42 9 345 655 217620139 217620453 2.840000e-71 279.0
8 TraesCS5B01G532100 chr3D 81.437 334 48 7 306 631 322769006 322768679 1.030000e-65 261.0
9 TraesCS5B01G532100 chr3D 78.919 370 52 17 304 654 13028910 13028548 1.040000e-55 228.0
10 TraesCS5B01G532100 chr3D 82.946 258 36 5 306 557 13025976 13025721 3.760000e-55 226.0
11 TraesCS5B01G532100 chr7D 81.788 302 48 5 407 703 241880298 241880597 2.880000e-61 246.0
12 TraesCS5B01G532100 chr7D 86.667 180 20 4 407 583 636763454 636763276 2.940000e-46 196.0
13 TraesCS5B01G532100 chr7D 96.970 33 1 0 3701 3733 638205266 638205298 5.210000e-04 56.5
14 TraesCS5B01G532100 chr2B 78.055 401 71 15 307 697 161204692 161205085 1.730000e-58 237.0
15 TraesCS5B01G532100 chr7A 81.208 298 46 6 407 695 256216432 256216136 8.070000e-57 231.0
16 TraesCS5B01G532100 chr3A 79.042 334 56 6 306 631 400752182 400752509 2.260000e-52 217.0
17 TraesCS5B01G532100 chr4D 79.365 189 31 6 306 489 63804583 63804398 3.920000e-25 126.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G532100 chr5B 689865635 689869371 3736 True 6902 6902 100.0000 1 3737 1 chr5B.!!$R1 3736
1 TraesCS5B01G532100 chr5D 546678256 546681214 2958 True 3936 3936 90.8150 779 3737 1 chr5D.!!$R1 2958
2 TraesCS5B01G532100 chr4A 622275195 622281528 6333 False 1518 2808 86.8410 773 3689 2 chr4A.!!$F1 2916
3 TraesCS5B01G532100 chr6D 460374513 460375792 1279 True 1092 1092 82.5950 1164 2434 1 chr6D.!!$R2 1270
4 TraesCS5B01G532100 chr6A 606445096 606446099 1003 True 590 590 78.0490 988 2025 1 chr6A.!!$R1 1037
5 TraesCS5B01G532100 chr3D 13025721 13028910 3189 True 227 228 80.9325 304 654 2 chr3D.!!$R2 350

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
62 63 0.037882 AGTGTGCTGATGTCCTGACG 60.038 55.0 0.00 0.0 0.00 4.35 F
384 390 0.038166 GAAGGATGCCTTGTGTCCCA 59.962 55.0 2.98 0.0 44.82 4.37 F
1852 3146 0.030908 GGAGCATCGAGTTAGTCCGG 59.969 60.0 0.00 0.0 34.37 5.14 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1762 3056 0.535102 CCTCATTGGTATGGTCGGGC 60.535 60.0 0.00 0.00 32.40 6.13 R
2264 3565 0.882042 AACTGCAAGCAGACCAGTCG 60.882 55.0 27.17 0.65 46.30 4.18 R
3120 8307 0.240678 TGCTGTTAACCTGCAATGCG 59.759 50.0 17.34 0.00 43.98 4.73 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 3.848272 AAGGTAATGTCATTGTTGGCG 57.152 42.857 8.39 0.00 0.00 5.69
25 26 3.066291 AGGTAATGTCATTGTTGGCGA 57.934 42.857 8.39 0.00 0.00 5.54
26 27 3.620488 AGGTAATGTCATTGTTGGCGAT 58.380 40.909 8.39 0.00 0.00 4.58
27 28 4.776349 AGGTAATGTCATTGTTGGCGATA 58.224 39.130 8.39 0.00 0.00 2.92
28 29 5.189928 AGGTAATGTCATTGTTGGCGATAA 58.810 37.500 8.39 0.00 0.00 1.75
29 30 5.827797 AGGTAATGTCATTGTTGGCGATAAT 59.172 36.000 8.39 0.00 0.00 1.28
30 31 6.321181 AGGTAATGTCATTGTTGGCGATAATT 59.679 34.615 8.39 0.00 0.00 1.40
31 32 6.417635 GGTAATGTCATTGTTGGCGATAATTG 59.582 38.462 8.39 0.00 0.00 2.32
32 33 5.833406 ATGTCATTGTTGGCGATAATTGA 57.167 34.783 0.00 0.00 0.00 2.57
33 34 5.635417 TGTCATTGTTGGCGATAATTGAA 57.365 34.783 0.00 0.00 0.00 2.69
34 35 6.018589 TGTCATTGTTGGCGATAATTGAAA 57.981 33.333 0.00 0.00 0.00 2.69
35 36 6.092092 TGTCATTGTTGGCGATAATTGAAAG 58.908 36.000 0.00 0.00 0.00 2.62
36 37 6.072230 TGTCATTGTTGGCGATAATTGAAAGA 60.072 34.615 0.00 0.00 0.00 2.52
37 38 6.974622 GTCATTGTTGGCGATAATTGAAAGAT 59.025 34.615 0.00 0.00 0.00 2.40
38 39 7.489113 GTCATTGTTGGCGATAATTGAAAGATT 59.511 33.333 0.00 0.00 0.00 2.40
39 40 7.488792 TCATTGTTGGCGATAATTGAAAGATTG 59.511 33.333 0.00 0.00 0.00 2.67
40 41 6.507958 TGTTGGCGATAATTGAAAGATTGA 57.492 33.333 0.00 0.00 0.00 2.57
41 42 7.099266 TGTTGGCGATAATTGAAAGATTGAT 57.901 32.000 0.00 0.00 0.00 2.57
42 43 7.546358 TGTTGGCGATAATTGAAAGATTGATT 58.454 30.769 0.00 0.00 0.00 2.57
43 44 8.681806 TGTTGGCGATAATTGAAAGATTGATTA 58.318 29.630 0.00 0.00 0.00 1.75
44 45 9.173939 GTTGGCGATAATTGAAAGATTGATTAG 57.826 33.333 0.00 0.00 0.00 1.73
45 46 8.450578 TGGCGATAATTGAAAGATTGATTAGT 57.549 30.769 0.00 0.00 0.00 2.24
46 47 8.344831 TGGCGATAATTGAAAGATTGATTAGTG 58.655 33.333 0.00 0.00 0.00 2.74
47 48 8.345565 GGCGATAATTGAAAGATTGATTAGTGT 58.654 33.333 0.00 0.00 0.00 3.55
48 49 9.162793 GCGATAATTGAAAGATTGATTAGTGTG 57.837 33.333 0.00 0.00 0.00 3.82
49 50 9.162793 CGATAATTGAAAGATTGATTAGTGTGC 57.837 33.333 0.00 0.00 0.00 4.57
52 53 7.692460 ATTGAAAGATTGATTAGTGTGCTGA 57.308 32.000 0.00 0.00 0.00 4.26
53 54 7.692460 TTGAAAGATTGATTAGTGTGCTGAT 57.308 32.000 0.00 0.00 0.00 2.90
54 55 7.080353 TGAAAGATTGATTAGTGTGCTGATG 57.920 36.000 0.00 0.00 0.00 3.07
55 56 6.656270 TGAAAGATTGATTAGTGTGCTGATGT 59.344 34.615 0.00 0.00 0.00 3.06
56 57 6.674694 AAGATTGATTAGTGTGCTGATGTC 57.325 37.500 0.00 0.00 0.00 3.06
57 58 5.121811 AGATTGATTAGTGTGCTGATGTCC 58.878 41.667 0.00 0.00 0.00 4.02
58 59 4.558226 TTGATTAGTGTGCTGATGTCCT 57.442 40.909 0.00 0.00 0.00 3.85
59 60 3.865446 TGATTAGTGTGCTGATGTCCTG 58.135 45.455 0.00 0.00 0.00 3.86
60 61 3.515104 TGATTAGTGTGCTGATGTCCTGA 59.485 43.478 0.00 0.00 0.00 3.86
61 62 3.319137 TTAGTGTGCTGATGTCCTGAC 57.681 47.619 0.00 0.00 0.00 3.51
62 63 0.037882 AGTGTGCTGATGTCCTGACG 60.038 55.000 0.00 0.00 0.00 4.35
63 64 1.016130 GTGTGCTGATGTCCTGACGG 61.016 60.000 0.00 0.00 0.00 4.79
64 65 2.103042 GTGCTGATGTCCTGACGGC 61.103 63.158 0.00 0.00 0.00 5.68
65 66 2.285773 TGCTGATGTCCTGACGGCT 61.286 57.895 0.00 0.00 0.00 5.52
66 67 0.970427 TGCTGATGTCCTGACGGCTA 60.970 55.000 0.00 0.00 0.00 3.93
67 68 0.249238 GCTGATGTCCTGACGGCTAG 60.249 60.000 0.00 0.00 0.00 3.42
68 69 1.107114 CTGATGTCCTGACGGCTAGT 58.893 55.000 0.00 0.00 0.00 2.57
69 70 1.478510 CTGATGTCCTGACGGCTAGTT 59.521 52.381 0.00 0.00 0.00 2.24
70 71 1.899814 TGATGTCCTGACGGCTAGTTT 59.100 47.619 0.00 0.00 0.00 2.66
71 72 2.301870 TGATGTCCTGACGGCTAGTTTT 59.698 45.455 0.00 0.00 0.00 2.43
72 73 2.163818 TGTCCTGACGGCTAGTTTTG 57.836 50.000 0.00 0.00 0.00 2.44
73 74 1.270625 TGTCCTGACGGCTAGTTTTGG 60.271 52.381 0.00 0.00 0.00 3.28
74 75 0.321298 TCCTGACGGCTAGTTTTGGC 60.321 55.000 0.00 0.00 0.00 4.52
75 76 0.605319 CCTGACGGCTAGTTTTGGCA 60.605 55.000 0.00 0.00 31.41 4.92
76 77 0.517316 CTGACGGCTAGTTTTGGCAC 59.483 55.000 0.00 0.00 31.41 5.01
77 78 0.107831 TGACGGCTAGTTTTGGCACT 59.892 50.000 0.00 0.00 31.41 4.40
78 79 1.345089 TGACGGCTAGTTTTGGCACTA 59.655 47.619 0.00 0.00 31.41 2.74
79 80 2.224329 TGACGGCTAGTTTTGGCACTAA 60.224 45.455 0.00 0.00 31.41 2.24
80 81 2.809696 GACGGCTAGTTTTGGCACTAAA 59.190 45.455 0.00 0.00 31.41 1.85
81 82 3.215975 ACGGCTAGTTTTGGCACTAAAA 58.784 40.909 0.00 0.00 31.41 1.52
82 83 3.824443 ACGGCTAGTTTTGGCACTAAAAT 59.176 39.130 0.00 0.00 32.71 1.82
83 84 4.279922 ACGGCTAGTTTTGGCACTAAAATT 59.720 37.500 0.00 0.00 32.71 1.82
84 85 4.857037 CGGCTAGTTTTGGCACTAAAATTC 59.143 41.667 0.00 0.00 32.71 2.17
85 86 4.857037 GGCTAGTTTTGGCACTAAAATTCG 59.143 41.667 0.00 0.00 32.71 3.34
86 87 4.857037 GCTAGTTTTGGCACTAAAATTCGG 59.143 41.667 0.00 0.00 32.71 4.30
87 88 3.649073 AGTTTTGGCACTAAAATTCGGC 58.351 40.909 0.00 0.00 32.71 5.54
88 89 3.320826 AGTTTTGGCACTAAAATTCGGCT 59.679 39.130 0.00 0.00 32.71 5.52
89 90 4.055360 GTTTTGGCACTAAAATTCGGCTT 58.945 39.130 0.00 0.00 32.71 4.35
90 91 5.010213 AGTTTTGGCACTAAAATTCGGCTTA 59.990 36.000 0.00 0.00 32.71 3.09
91 92 5.652994 TTTGGCACTAAAATTCGGCTTAT 57.347 34.783 0.00 0.00 0.00 1.73
92 93 4.893424 TGGCACTAAAATTCGGCTTATC 57.107 40.909 0.00 0.00 0.00 1.75
93 94 4.523083 TGGCACTAAAATTCGGCTTATCT 58.477 39.130 0.00 0.00 0.00 1.98
94 95 4.574828 TGGCACTAAAATTCGGCTTATCTC 59.425 41.667 0.00 0.00 0.00 2.75
95 96 4.816925 GGCACTAAAATTCGGCTTATCTCT 59.183 41.667 0.00 0.00 0.00 3.10
96 97 5.297029 GGCACTAAAATTCGGCTTATCTCTT 59.703 40.000 0.00 0.00 0.00 2.85
97 98 6.195165 GCACTAAAATTCGGCTTATCTCTTG 58.805 40.000 0.00 0.00 0.00 3.02
98 99 6.037172 GCACTAAAATTCGGCTTATCTCTTGA 59.963 38.462 0.00 0.00 0.00 3.02
99 100 7.625553 CACTAAAATTCGGCTTATCTCTTGAG 58.374 38.462 0.00 0.00 0.00 3.02
100 101 5.491635 AAAATTCGGCTTATCTCTTGAGC 57.508 39.130 0.00 0.00 35.71 4.26
101 102 3.827008 ATTCGGCTTATCTCTTGAGCA 57.173 42.857 0.00 0.00 38.14 4.26
102 103 3.610040 TTCGGCTTATCTCTTGAGCAA 57.390 42.857 0.00 0.00 38.14 3.91
103 104 3.610040 TCGGCTTATCTCTTGAGCAAA 57.390 42.857 0.00 0.00 38.14 3.68
104 105 3.937814 TCGGCTTATCTCTTGAGCAAAA 58.062 40.909 0.00 0.00 38.14 2.44
105 106 3.935203 TCGGCTTATCTCTTGAGCAAAAG 59.065 43.478 0.00 0.00 38.14 2.27
106 107 3.064545 CGGCTTATCTCTTGAGCAAAAGG 59.935 47.826 0.00 0.00 38.14 3.11
107 108 3.181492 GGCTTATCTCTTGAGCAAAAGGC 60.181 47.826 12.90 12.90 45.30 4.35
124 125 2.670251 CGGGCGGCAACAACCTTA 60.670 61.111 12.47 0.00 32.99 2.69
125 126 2.043980 CGGGCGGCAACAACCTTAT 61.044 57.895 12.47 0.00 32.99 1.73
126 127 1.591504 CGGGCGGCAACAACCTTATT 61.592 55.000 12.47 0.00 32.99 1.40
127 128 1.465794 GGGCGGCAACAACCTTATTA 58.534 50.000 12.47 0.00 32.99 0.98
128 129 2.028876 GGGCGGCAACAACCTTATTAT 58.971 47.619 12.47 0.00 32.99 1.28
129 130 2.429250 GGGCGGCAACAACCTTATTATT 59.571 45.455 12.47 0.00 32.99 1.40
130 131 3.633065 GGGCGGCAACAACCTTATTATTA 59.367 43.478 12.47 0.00 32.99 0.98
131 132 4.098196 GGGCGGCAACAACCTTATTATTAA 59.902 41.667 12.47 0.00 32.99 1.40
132 133 5.221362 GGGCGGCAACAACCTTATTATTAAT 60.221 40.000 12.47 0.00 32.99 1.40
133 134 6.277605 GGCGGCAACAACCTTATTATTAATT 58.722 36.000 3.07 0.00 0.00 1.40
134 135 6.759356 GGCGGCAACAACCTTATTATTAATTT 59.241 34.615 3.07 0.00 0.00 1.82
135 136 7.279090 GGCGGCAACAACCTTATTATTAATTTT 59.721 33.333 3.07 0.00 0.00 1.82
136 137 8.113675 GCGGCAACAACCTTATTATTAATTTTG 58.886 33.333 0.00 0.00 0.00 2.44
137 138 9.360093 CGGCAACAACCTTATTATTAATTTTGA 57.640 29.630 0.00 0.00 0.00 2.69
155 156 7.880160 ATTTTGATAATTTGGAGGTCATCGA 57.120 32.000 0.00 0.00 0.00 3.59
156 157 6.677781 TTTGATAATTTGGAGGTCATCGAC 57.322 37.500 0.00 0.00 0.00 4.20
157 158 5.351948 TGATAATTTGGAGGTCATCGACA 57.648 39.130 0.00 0.00 33.68 4.35
158 159 5.116180 TGATAATTTGGAGGTCATCGACAC 58.884 41.667 0.00 0.00 33.68 3.67
159 160 2.403252 ATTTGGAGGTCATCGACACC 57.597 50.000 7.22 7.22 33.68 4.16
160 161 1.052617 TTTGGAGGTCATCGACACCA 58.947 50.000 16.01 2.39 38.17 4.17
161 162 1.275666 TTGGAGGTCATCGACACCAT 58.724 50.000 16.01 3.37 39.04 3.55
162 163 0.536724 TGGAGGTCATCGACACCATG 59.463 55.000 16.01 0.00 36.35 3.66
163 164 0.824109 GGAGGTCATCGACACCATGA 59.176 55.000 16.01 0.00 36.23 3.07
164 165 1.207089 GGAGGTCATCGACACCATGAA 59.793 52.381 16.01 0.00 36.23 2.57
165 166 2.544685 GAGGTCATCGACACCATGAAG 58.455 52.381 16.01 0.00 36.23 3.02
166 167 2.166459 GAGGTCATCGACACCATGAAGA 59.834 50.000 16.01 0.00 36.23 2.87
167 168 2.167281 AGGTCATCGACACCATGAAGAG 59.833 50.000 16.01 0.00 36.23 2.85
168 169 2.093973 GGTCATCGACACCATGAAGAGT 60.094 50.000 10.01 0.00 33.68 3.24
169 170 2.926200 GTCATCGACACCATGAAGAGTG 59.074 50.000 0.00 0.00 39.93 3.51
171 172 3.761752 TCATCGACACCATGAAGAGTGTA 59.238 43.478 5.58 0.00 46.87 2.90
172 173 3.850122 TCGACACCATGAAGAGTGTAG 57.150 47.619 5.58 6.19 46.87 2.74
173 174 2.492088 TCGACACCATGAAGAGTGTAGG 59.508 50.000 5.58 2.51 46.87 3.18
174 175 2.492088 CGACACCATGAAGAGTGTAGGA 59.508 50.000 5.58 0.00 46.87 2.94
175 176 3.056821 CGACACCATGAAGAGTGTAGGAA 60.057 47.826 5.58 0.00 46.87 3.36
176 177 4.499183 GACACCATGAAGAGTGTAGGAAG 58.501 47.826 5.58 0.00 46.87 3.46
177 178 3.904339 ACACCATGAAGAGTGTAGGAAGT 59.096 43.478 3.94 0.00 45.14 3.01
178 179 4.348168 ACACCATGAAGAGTGTAGGAAGTT 59.652 41.667 3.94 0.00 45.14 2.66
179 180 4.932200 CACCATGAAGAGTGTAGGAAGTTC 59.068 45.833 0.00 0.00 0.00 3.01
180 181 4.020128 ACCATGAAGAGTGTAGGAAGTTCC 60.020 45.833 14.54 14.54 36.58 3.62
181 182 3.936372 TGAAGAGTGTAGGAAGTTCCG 57.064 47.619 16.31 0.00 42.75 4.30
182 183 2.029290 TGAAGAGTGTAGGAAGTTCCGC 60.029 50.000 16.31 13.39 42.75 5.54
183 184 0.526662 AGAGTGTAGGAAGTTCCGCG 59.473 55.000 16.31 0.00 42.75 6.46
184 185 0.458025 GAGTGTAGGAAGTTCCGCGG 60.458 60.000 22.12 22.12 42.75 6.46
185 186 1.447314 GTGTAGGAAGTTCCGCGGG 60.447 63.158 27.83 6.80 42.75 6.13
186 187 1.607178 TGTAGGAAGTTCCGCGGGA 60.607 57.895 27.83 16.16 42.75 5.14
187 188 1.141234 GTAGGAAGTTCCGCGGGAG 59.859 63.158 27.83 0.00 42.75 4.30
188 189 1.304713 TAGGAAGTTCCGCGGGAGT 60.305 57.895 27.83 18.78 42.75 3.85
189 190 1.601419 TAGGAAGTTCCGCGGGAGTG 61.601 60.000 27.83 0.00 42.75 3.51
190 191 3.119096 GAAGTTCCGCGGGAGTGC 61.119 66.667 27.83 16.02 39.52 4.40
191 192 4.699522 AAGTTCCGCGGGAGTGCC 62.700 66.667 27.83 4.04 39.52 5.01
231 232 4.722700 GGGCCATGGCGTGACACT 62.723 66.667 29.90 0.00 43.06 3.55
232 233 3.434319 GGCCATGGCGTGACACTG 61.434 66.667 29.90 0.00 43.06 3.66
233 234 3.434319 GCCATGGCGTGACACTGG 61.434 66.667 23.48 5.66 0.00 4.00
234 235 2.747460 CCATGGCGTGACACTGGG 60.747 66.667 8.63 0.00 0.00 4.45
235 236 2.032528 CATGGCGTGACACTGGGT 59.967 61.111 0.00 0.00 0.00 4.51
236 237 1.295101 CATGGCGTGACACTGGGTA 59.705 57.895 0.00 0.00 0.00 3.69
237 238 1.019278 CATGGCGTGACACTGGGTAC 61.019 60.000 0.00 0.00 0.00 3.34
238 239 1.476845 ATGGCGTGACACTGGGTACA 61.477 55.000 3.68 0.00 0.00 2.90
239 240 1.295423 GGCGTGACACTGGGTACAT 59.705 57.895 3.68 0.00 0.00 2.29
240 241 0.739813 GGCGTGACACTGGGTACATC 60.740 60.000 3.68 0.00 0.00 3.06
241 242 1.076533 GCGTGACACTGGGTACATCG 61.077 60.000 3.68 0.00 0.00 3.84
242 243 0.242825 CGTGACACTGGGTACATCGT 59.757 55.000 3.68 0.00 0.00 3.73
243 244 1.710013 GTGACACTGGGTACATCGTG 58.290 55.000 0.00 0.65 0.00 4.35
244 245 0.606096 TGACACTGGGTACATCGTGG 59.394 55.000 10.91 0.00 0.00 4.94
245 246 0.892755 GACACTGGGTACATCGTGGA 59.107 55.000 10.91 0.00 0.00 4.02
246 247 1.480954 GACACTGGGTACATCGTGGAT 59.519 52.381 10.91 0.00 0.00 3.41
247 248 1.207089 ACACTGGGTACATCGTGGATG 59.793 52.381 4.15 4.15 44.71 3.51
248 249 1.480545 CACTGGGTACATCGTGGATGA 59.519 52.381 12.22 0.00 42.09 2.92
249 250 1.757118 ACTGGGTACATCGTGGATGAG 59.243 52.381 12.22 1.92 42.09 2.90
250 251 2.031870 CTGGGTACATCGTGGATGAGA 58.968 52.381 12.22 0.00 42.09 3.27
251 252 2.430694 CTGGGTACATCGTGGATGAGAA 59.569 50.000 12.22 0.00 42.09 2.87
252 253 3.038280 TGGGTACATCGTGGATGAGAAT 58.962 45.455 12.22 0.00 42.09 2.40
253 254 3.181466 TGGGTACATCGTGGATGAGAATG 60.181 47.826 12.22 0.00 42.09 2.67
254 255 2.802816 GGTACATCGTGGATGAGAATGC 59.197 50.000 12.22 0.00 42.09 3.56
255 256 1.959042 ACATCGTGGATGAGAATGCC 58.041 50.000 12.22 0.00 42.09 4.40
256 257 1.210234 ACATCGTGGATGAGAATGCCA 59.790 47.619 12.22 0.00 42.09 4.92
257 258 1.600957 CATCGTGGATGAGAATGCCAC 59.399 52.381 0.00 0.00 46.60 5.01
259 260 3.575506 GTGGATGAGAATGCCACCA 57.424 52.632 0.00 0.00 44.86 4.17
260 261 1.386533 GTGGATGAGAATGCCACCAG 58.613 55.000 0.00 0.00 44.86 4.00
261 262 0.994247 TGGATGAGAATGCCACCAGT 59.006 50.000 0.00 0.00 0.00 4.00
262 263 1.355381 TGGATGAGAATGCCACCAGTT 59.645 47.619 0.00 0.00 0.00 3.16
263 264 1.747355 GGATGAGAATGCCACCAGTTG 59.253 52.381 0.00 0.00 0.00 3.16
264 265 1.133790 GATGAGAATGCCACCAGTTGC 59.866 52.381 0.00 0.00 0.00 4.17
265 266 1.236616 TGAGAATGCCACCAGTTGCG 61.237 55.000 0.00 0.00 0.00 4.85
266 267 2.126346 GAATGCCACCAGTTGCGC 60.126 61.111 0.00 0.00 0.00 6.09
267 268 3.951655 GAATGCCACCAGTTGCGCG 62.952 63.158 0.00 0.00 0.00 6.86
271 272 4.988598 CCACCAGTTGCGCGTCCT 62.989 66.667 8.43 0.00 0.00 3.85
272 273 2.048597 CACCAGTTGCGCGTCCTA 60.049 61.111 8.43 0.00 0.00 2.94
273 274 2.048503 ACCAGTTGCGCGTCCTAC 60.049 61.111 8.43 0.00 0.00 3.18
274 275 2.048597 CCAGTTGCGCGTCCTACA 60.049 61.111 8.43 0.00 0.00 2.74
275 276 2.380410 CCAGTTGCGCGTCCTACAC 61.380 63.158 8.43 0.00 0.00 2.90
283 284 4.347096 CGTCCTACACGCCACAAA 57.653 55.556 0.00 0.00 42.87 2.83
284 285 2.607457 CGTCCTACACGCCACAAAA 58.393 52.632 0.00 0.00 42.87 2.44
285 286 0.938713 CGTCCTACACGCCACAAAAA 59.061 50.000 0.00 0.00 42.87 1.94
286 287 1.533731 CGTCCTACACGCCACAAAAAT 59.466 47.619 0.00 0.00 42.87 1.82
287 288 2.031508 CGTCCTACACGCCACAAAAATT 60.032 45.455 0.00 0.00 42.87 1.82
288 289 3.549221 CGTCCTACACGCCACAAAAATTT 60.549 43.478 0.00 0.00 42.87 1.82
289 290 3.733727 GTCCTACACGCCACAAAAATTTG 59.266 43.478 4.40 4.40 43.62 2.32
290 291 7.930763 CGTCCTACACGCCACAAAAATTTGT 62.931 44.000 5.72 5.72 46.23 2.83
301 302 4.707210 CAAAAATTTGTTTGGTCGCGAT 57.293 36.364 14.06 0.00 35.29 4.58
302 303 4.444468 CAAAAATTTGTTTGGTCGCGATG 58.556 39.130 14.06 0.00 35.29 3.84
303 304 3.634568 AAATTTGTTTGGTCGCGATGA 57.365 38.095 14.06 0.00 0.00 2.92
304 305 3.848272 AATTTGTTTGGTCGCGATGAT 57.152 38.095 14.06 0.00 0.00 2.45
305 306 2.610219 TTTGTTTGGTCGCGATGATG 57.390 45.000 14.06 0.00 0.00 3.07
306 307 1.802069 TTGTTTGGTCGCGATGATGA 58.198 45.000 14.06 0.00 0.00 2.92
307 308 1.075542 TGTTTGGTCGCGATGATGAC 58.924 50.000 14.06 8.79 0.00 3.06
325 326 4.129737 CTCACGTCCACCGGCGAT 62.130 66.667 9.30 0.00 42.24 4.58
365 366 1.202855 CCAAGGATGAGTAGGGCATGG 60.203 57.143 0.00 0.00 0.00 3.66
366 367 1.770658 CAAGGATGAGTAGGGCATGGA 59.229 52.381 0.00 0.00 0.00 3.41
370 371 2.050144 GATGAGTAGGGCATGGAAGGA 58.950 52.381 0.00 0.00 0.00 3.36
371 372 2.196742 TGAGTAGGGCATGGAAGGAT 57.803 50.000 0.00 0.00 0.00 3.24
383 389 0.681243 GGAAGGATGCCTTGTGTCCC 60.681 60.000 2.98 0.00 44.82 4.46
384 390 0.038166 GAAGGATGCCTTGTGTCCCA 59.962 55.000 2.98 0.00 44.82 4.37
385 391 0.482446 AAGGATGCCTTGTGTCCCAA 59.518 50.000 0.00 0.00 42.96 4.12
386 392 3.461276 GAAGGATGCCTTGTGTCCCAAG 61.461 54.545 2.98 0.00 44.82 3.61
416 422 3.285484 GTCCGTCTCCCATGTTCTACTA 58.715 50.000 0.00 0.00 0.00 1.82
422 428 5.069251 CGTCTCCCATGTTCTACTATTCCTT 59.931 44.000 0.00 0.00 0.00 3.36
423 429 6.284459 GTCTCCCATGTTCTACTATTCCTTG 58.716 44.000 0.00 0.00 0.00 3.61
425 431 4.721776 TCCCATGTTCTACTATTCCTTGCT 59.278 41.667 0.00 0.00 0.00 3.91
427 433 5.396772 CCCATGTTCTACTATTCCTTGCTGA 60.397 44.000 0.00 0.00 0.00 4.26
428 434 6.115446 CCATGTTCTACTATTCCTTGCTGAA 58.885 40.000 0.00 0.00 0.00 3.02
429 435 6.259608 CCATGTTCTACTATTCCTTGCTGAAG 59.740 42.308 0.00 0.00 0.00 3.02
430 436 6.605471 TGTTCTACTATTCCTTGCTGAAGA 57.395 37.500 0.00 0.00 0.00 2.87
431 437 6.398918 TGTTCTACTATTCCTTGCTGAAGAC 58.601 40.000 0.00 0.00 0.00 3.01
442 448 0.674895 GCTGAAGACCGCACCTTCAT 60.675 55.000 11.30 0.00 45.99 2.57
449 455 1.234615 ACCGCACCTTCATTTCACGG 61.235 55.000 0.00 0.00 44.49 4.94
450 456 1.154225 CGCACCTTCATTTCACGGC 60.154 57.895 0.00 0.00 0.00 5.68
455 461 2.095567 CACCTTCATTTCACGGCTCTTG 60.096 50.000 0.00 0.00 0.00 3.02
470 476 2.741985 TTGTCGCCGCCAGTCATG 60.742 61.111 0.00 0.00 0.00 3.07
493 499 3.838271 GGCAGATGGAGGACGCGA 61.838 66.667 15.93 0.00 0.00 5.87
496 502 1.371022 CAGATGGAGGACGCGATCG 60.371 63.158 15.93 11.69 42.43 3.69
497 503 2.731348 GATGGAGGACGCGATCGC 60.731 66.667 29.80 29.80 39.84 4.58
498 504 4.286320 ATGGAGGACGCGATCGCC 62.286 66.667 32.63 20.09 39.84 5.54
527 533 0.859232 CAACAAGGACTTGGACGACG 59.141 55.000 15.72 0.00 44.45 5.12
529 535 1.111116 ACAAGGACTTGGACGACGGA 61.111 55.000 15.72 0.00 44.45 4.69
555 561 3.286353 GCCGTAGTCTAGGTTTAGGTCT 58.714 50.000 0.00 0.00 0.00 3.85
557 563 3.631227 CCGTAGTCTAGGTTTAGGTCTGG 59.369 52.174 0.00 0.00 0.00 3.86
558 564 4.268359 CGTAGTCTAGGTTTAGGTCTGGT 58.732 47.826 0.00 0.00 0.00 4.00
562 568 2.384375 TCTAGGTTTAGGTCTGGTCCCA 59.616 50.000 0.00 0.00 0.00 4.37
563 569 2.361085 AGGTTTAGGTCTGGTCCCAT 57.639 50.000 0.00 0.00 0.00 4.00
568 583 4.219944 GGTTTAGGTCTGGTCCCATTTTTC 59.780 45.833 0.00 0.00 0.00 2.29
572 587 3.834231 AGGTCTGGTCCCATTTTTCAATG 59.166 43.478 0.00 0.00 39.79 2.82
592 607 7.205992 TCAATGAAAAATGTCCGAAATGTGAA 58.794 30.769 0.00 0.00 0.00 3.18
593 608 7.871973 TCAATGAAAAATGTCCGAAATGTGAAT 59.128 29.630 0.00 0.00 0.00 2.57
594 609 7.585286 ATGAAAAATGTCCGAAATGTGAATG 57.415 32.000 0.00 0.00 0.00 2.67
595 610 6.511416 TGAAAAATGTCCGAAATGTGAATGT 58.489 32.000 0.00 0.00 0.00 2.71
596 611 6.420306 TGAAAAATGTCCGAAATGTGAATGTG 59.580 34.615 0.00 0.00 0.00 3.21
597 612 2.987413 TGTCCGAAATGTGAATGTGC 57.013 45.000 0.00 0.00 0.00 4.57
599 614 2.483877 TGTCCGAAATGTGAATGTGCTC 59.516 45.455 0.00 0.00 0.00 4.26
601 616 1.202065 CCGAAATGTGAATGTGCTCCG 60.202 52.381 0.00 0.00 0.00 4.63
602 617 1.202065 CGAAATGTGAATGTGCTCCGG 60.202 52.381 0.00 0.00 0.00 5.14
603 618 0.527565 AAATGTGAATGTGCTCCGGC 59.472 50.000 0.00 0.00 39.26 6.13
613 630 1.271108 TGTGCTCCGGCTTTGTATGAA 60.271 47.619 0.00 0.00 39.59 2.57
614 631 1.130561 GTGCTCCGGCTTTGTATGAAC 59.869 52.381 0.00 0.00 39.59 3.18
622 639 3.303329 CGGCTTTGTATGAACATCATCCG 60.303 47.826 0.00 0.00 38.26 4.18
623 640 3.548818 GGCTTTGTATGAACATCATCCGC 60.549 47.826 0.00 0.00 38.26 5.54
624 641 3.313526 GCTTTGTATGAACATCATCCGCT 59.686 43.478 0.00 0.00 38.26 5.52
631 648 3.277715 TGAACATCATCCGCTTTGCATA 58.722 40.909 0.00 0.00 0.00 3.14
634 651 4.032703 ACATCATCCGCTTTGCATAAAC 57.967 40.909 0.00 0.00 0.00 2.01
641 658 2.505866 CGCTTTGCATAAACTTCGTCC 58.494 47.619 0.00 0.00 0.00 4.79
643 660 2.727916 GCTTTGCATAAACTTCGTCCGG 60.728 50.000 0.00 0.00 0.00 5.14
646 663 3.316071 TGCATAAACTTCGTCCGGTTA 57.684 42.857 0.00 0.00 0.00 2.85
654 671 3.126073 ACTTCGTCCGGTTAGTTGAAAC 58.874 45.455 0.00 0.00 0.00 2.78
655 672 2.153366 TCGTCCGGTTAGTTGAAACC 57.847 50.000 0.00 0.00 44.63 3.27
656 673 1.150827 CGTCCGGTTAGTTGAAACCC 58.849 55.000 0.00 0.00 45.18 4.11
657 674 1.150827 GTCCGGTTAGTTGAAACCCG 58.849 55.000 0.00 0.00 45.18 5.28
659 676 1.579964 CCGGTTAGTTGAAACCCGGC 61.580 60.000 13.20 0.00 45.18 6.13
662 679 1.268625 GGTTAGTTGAAACCCGGCTTG 59.731 52.381 0.00 0.00 42.68 4.01
666 683 1.407618 AGTTGAAACCCGGCTTGAAAC 59.592 47.619 0.00 0.00 0.00 2.78
672 689 1.303091 ACCCGGCTTGAAACGTATGC 61.303 55.000 0.00 0.00 0.00 3.14
690 707 6.758149 CGTATGCGTATAACATTGGATTACC 58.242 40.000 0.00 0.00 0.00 2.85
691 708 5.856126 ATGCGTATAACATTGGATTACCG 57.144 39.130 0.00 0.00 39.42 4.02
692 709 4.059511 TGCGTATAACATTGGATTACCGG 58.940 43.478 0.00 0.00 39.42 5.28
693 710 4.060205 GCGTATAACATTGGATTACCGGT 58.940 43.478 13.98 13.98 39.42 5.28
694 711 4.512571 GCGTATAACATTGGATTACCGGTT 59.487 41.667 15.04 0.00 39.42 4.44
696 713 5.178067 CGTATAACATTGGATTACCGGTTCC 59.822 44.000 15.04 16.33 39.42 3.62
697 714 2.430248 ACATTGGATTACCGGTTCCC 57.570 50.000 20.37 15.70 39.42 3.97
698 715 1.636519 ACATTGGATTACCGGTTCCCA 59.363 47.619 20.37 17.85 39.42 4.37
700 717 1.065647 TTGGATTACCGGTTCCCACA 58.934 50.000 20.37 8.44 39.42 4.17
701 718 1.291109 TGGATTACCGGTTCCCACAT 58.709 50.000 20.37 1.43 39.42 3.21
702 719 1.210967 TGGATTACCGGTTCCCACATC 59.789 52.381 20.37 9.59 39.42 3.06
703 720 1.476291 GGATTACCGGTTCCCACATCC 60.476 57.143 15.04 10.80 0.00 3.51
704 721 0.179468 ATTACCGGTTCCCACATCCG 59.821 55.000 15.04 0.00 43.30 4.18
705 722 1.193462 TTACCGGTTCCCACATCCGT 61.193 55.000 15.04 0.00 42.30 4.69
706 723 1.890625 TACCGGTTCCCACATCCGTG 61.891 60.000 15.04 0.00 42.30 4.94
707 724 3.124921 CGGTTCCCACATCCGTGC 61.125 66.667 0.00 0.00 42.17 5.34
708 725 2.750237 GGTTCCCACATCCGTGCC 60.750 66.667 0.00 0.00 42.17 5.01
709 726 3.124921 GTTCCCACATCCGTGCCG 61.125 66.667 0.00 0.00 42.17 5.69
710 727 3.632080 TTCCCACATCCGTGCCGT 61.632 61.111 0.00 0.00 42.17 5.68
711 728 3.892740 TTCCCACATCCGTGCCGTG 62.893 63.158 0.00 0.00 42.17 4.94
714 731 3.118454 CACATCCGTGCCGTGGAC 61.118 66.667 0.00 0.00 38.60 4.02
715 732 3.311110 ACATCCGTGCCGTGGACT 61.311 61.111 0.00 0.00 38.60 3.85
716 733 2.815211 CATCCGTGCCGTGGACTG 60.815 66.667 0.00 0.00 38.60 3.51
717 734 4.082523 ATCCGTGCCGTGGACTGG 62.083 66.667 0.00 0.00 38.60 4.00
721 738 3.936203 GTGCCGTGGACTGGTGGA 61.936 66.667 0.00 0.00 0.00 4.02
722 739 3.164977 TGCCGTGGACTGGTGGAA 61.165 61.111 0.00 0.00 0.00 3.53
723 740 2.112297 GCCGTGGACTGGTGGAAA 59.888 61.111 0.00 0.00 0.00 3.13
724 741 1.966451 GCCGTGGACTGGTGGAAAG 60.966 63.158 0.00 0.00 0.00 2.62
725 742 1.450211 CCGTGGACTGGTGGAAAGT 59.550 57.895 0.00 0.00 0.00 2.66
726 743 0.602905 CCGTGGACTGGTGGAAAGTC 60.603 60.000 0.00 0.00 42.79 3.01
727 744 0.393077 CGTGGACTGGTGGAAAGTCT 59.607 55.000 3.80 0.00 43.03 3.24
729 746 1.416401 GTGGACTGGTGGAAAGTCTGA 59.584 52.381 3.80 0.00 43.03 3.27
731 748 1.002544 GGACTGGTGGAAAGTCTGAGG 59.997 57.143 3.80 0.00 43.03 3.86
734 751 1.694150 CTGGTGGAAAGTCTGAGGACA 59.306 52.381 0.00 0.00 44.36 4.02
735 752 1.694150 TGGTGGAAAGTCTGAGGACAG 59.306 52.381 0.00 0.00 44.36 3.51
742 759 4.442038 TCTGAGGACAGATGCGGT 57.558 55.556 0.00 0.00 46.55 5.68
743 760 1.893062 TCTGAGGACAGATGCGGTG 59.107 57.895 0.00 0.00 46.55 4.94
744 761 0.900182 TCTGAGGACAGATGCGGTGT 60.900 55.000 0.00 0.00 46.55 4.16
748 765 4.192000 GACAGATGCGGTGTCCAG 57.808 61.111 2.29 0.00 38.75 3.86
752 769 1.066858 ACAGATGCGGTGTCCAGTTAG 60.067 52.381 0.00 0.00 0.00 2.34
753 770 0.108138 AGATGCGGTGTCCAGTTAGC 60.108 55.000 0.00 0.00 0.00 3.09
754 771 1.421410 GATGCGGTGTCCAGTTAGCG 61.421 60.000 0.00 0.00 40.42 4.26
766 783 2.047655 TTAGCGGGTCAGCGTTGG 60.048 61.111 0.00 0.00 43.00 3.77
767 784 3.599285 TTAGCGGGTCAGCGTTGGG 62.599 63.158 0.00 0.00 43.00 4.12
828 911 2.228241 CGCTGCCATACCGTGTACG 61.228 63.158 0.00 0.00 39.44 3.67
840 923 4.063967 TGTACGCAGGCTGACCGG 62.064 66.667 20.86 0.00 42.76 5.28
943 1186 0.392595 ACGCCGAGGAAAAAGATCCC 60.393 55.000 0.00 0.00 40.59 3.85
944 1187 1.429148 CGCCGAGGAAAAAGATCCCG 61.429 60.000 0.00 0.00 40.59 5.14
945 1188 1.715862 GCCGAGGAAAAAGATCCCGC 61.716 60.000 0.00 0.00 40.59 6.13
946 1189 1.429148 CCGAGGAAAAAGATCCCGCG 61.429 60.000 0.00 0.00 40.59 6.46
968 1211 1.634702 CGAGAAAGAAAGAGGAGCGG 58.365 55.000 0.00 0.00 0.00 5.52
1262 2387 3.545703 CCCTCTTTATTCAGAACCGCAT 58.454 45.455 0.00 0.00 0.00 4.73
1285 2410 6.748333 TTCTTCATTCAGATCTGCGATTTT 57.252 33.333 18.36 0.00 0.00 1.82
1286 2411 6.115450 TCTTCATTCAGATCTGCGATTTTG 57.885 37.500 18.36 8.53 0.00 2.44
1287 2412 4.888038 TCATTCAGATCTGCGATTTTGG 57.112 40.909 18.36 3.39 0.00 3.28
1288 2413 3.628942 TCATTCAGATCTGCGATTTTGGG 59.371 43.478 18.36 3.07 0.00 4.12
1289 2414 1.382522 TCAGATCTGCGATTTTGGGC 58.617 50.000 18.36 0.00 0.00 5.36
1335 2512 9.790389 CCTAGACCAATCGATGTAATATCTTAC 57.210 37.037 0.00 0.00 38.17 2.34
1359 2541 6.772716 ACTAGTTGATGTGTGGTTCTTGATTT 59.227 34.615 0.00 0.00 0.00 2.17
1360 2542 6.076981 AGTTGATGTGTGGTTCTTGATTTC 57.923 37.500 0.00 0.00 0.00 2.17
1379 2561 4.412796 TTCTAGCCAATCAGTCAGATGG 57.587 45.455 0.00 0.00 36.96 3.51
1473 2655 3.633361 GCTGAGGCCTGTTAGTGTT 57.367 52.632 12.00 0.00 0.00 3.32
1474 2656 2.762535 GCTGAGGCCTGTTAGTGTTA 57.237 50.000 12.00 0.00 0.00 2.41
1600 2798 2.749621 GGTGTTTCCATCTGCGAGAAAT 59.250 45.455 0.00 0.00 32.54 2.17
1732 2952 3.198068 CAACTCCATGTTCCTCATACCG 58.802 50.000 0.00 0.00 36.63 4.02
1762 3056 3.195698 GTCGCGGCAAGCCTAAGG 61.196 66.667 5.47 0.00 44.76 2.69
1786 3080 2.508526 GACCATACCAATGAGGATGCC 58.491 52.381 0.00 0.00 41.22 4.40
1813 3107 1.153409 CAGCGATGCCTCTGCTTCT 60.153 57.895 5.81 0.00 39.00 2.85
1843 3137 4.899239 GCACCGGGGAGCATCGAG 62.899 72.222 8.67 0.00 34.37 4.04
1852 3146 0.030908 GGAGCATCGAGTTAGTCCGG 59.969 60.000 0.00 0.00 34.37 5.14
1941 3235 1.829849 TGGAGATGGCTCTGAAGACAG 59.170 52.381 0.00 0.00 46.05 3.51
1945 3239 3.113824 AGATGGCTCTGAAGACAGGAAT 58.886 45.455 0.00 0.00 46.05 3.01
2056 3350 3.639094 AGATTGATAGGTTCTGGAGGACG 59.361 47.826 0.00 0.00 0.00 4.79
2098 3399 2.932614 CACGGTTCTGGACATGATTCTC 59.067 50.000 0.00 0.00 0.00 2.87
2127 3428 2.270257 TGTTGCATGACTGGCTGCC 61.270 57.895 12.87 12.87 37.59 4.85
2137 3438 1.545582 GACTGGCTGCCAAATGCTTTA 59.454 47.619 23.51 0.00 42.00 1.85
2145 3446 3.988819 TGCCAAATGCTTTACCAGAAAC 58.011 40.909 0.00 0.00 42.00 2.78
2148 3449 5.092799 GCCAAATGCTTTACCAGAAACTGG 61.093 45.833 15.13 15.13 46.47 4.00
2161 3462 4.322725 CCAGAAACTGGTGTGCTATCTGTA 60.323 45.833 9.36 0.00 45.82 2.74
2176 3477 3.819564 TCTGTAATGGAATCTGACGGG 57.180 47.619 0.00 0.00 0.00 5.28
2248 3549 2.338785 GCAGGAAGCAGGGAGTTGC 61.339 63.158 0.00 0.00 44.79 4.17
2290 3591 3.562779 CTGCTTGCAGTTTGCCCGG 62.563 63.158 13.89 0.00 44.23 5.73
2351 3652 2.650322 TGGATAAATGGGAACGAAGCC 58.350 47.619 0.00 0.00 0.00 4.35
2386 3687 1.859703 CGTGCAGATCTTCAGATGCTC 59.140 52.381 0.00 0.00 34.37 4.26
2413 3714 2.680339 GGAAGTGCTGTATGAAAGGCTC 59.320 50.000 0.00 0.00 0.00 4.70
2446 3747 0.675633 GGGTGCATGCTTTCAGTGTT 59.324 50.000 20.33 0.00 0.00 3.32
2449 3750 1.034356 TGCATGCTTTCAGTGTTGCT 58.966 45.000 20.33 0.00 0.00 3.91
2479 3780 1.261480 TGACTCCAGCTGAGAGGTTC 58.739 55.000 26.12 18.94 44.42 3.62
2548 3849 5.278660 GCAGCCCTTCATCAGGTATAATTTG 60.279 44.000 0.00 0.00 42.02 2.32
2553 3854 7.041098 GCCCTTCATCAGGTATAATTTGTACTG 60.041 40.741 3.72 0.00 42.02 2.74
2554 3855 7.993183 CCCTTCATCAGGTATAATTTGTACTGT 59.007 37.037 3.72 0.00 42.02 3.55
2584 3887 6.785488 TTGTGTAGAAATTCTGTAGTGCAG 57.215 37.500 5.64 1.12 46.34 4.41
2616 3919 6.530913 TCTTTCTCACTCAAACATCTTTCG 57.469 37.500 0.00 0.00 0.00 3.46
2622 3925 3.362831 CACTCAAACATCTTTCGCAATGC 59.637 43.478 0.00 0.00 0.00 3.56
2760 4067 4.552674 TGATCAACCTACCCTGCTACATA 58.447 43.478 0.00 0.00 0.00 2.29
2818 4125 1.361271 CTGGTGTTGCTGCACTTGG 59.639 57.895 0.00 0.00 39.21 3.61
2853 4163 0.592637 CAACAGAAGATTGCCGTGCA 59.407 50.000 0.00 0.00 36.47 4.57
2979 4325 2.674380 CTTGGCCCACTGCTCACC 60.674 66.667 0.00 0.00 40.92 4.02
2991 4337 1.792949 CTGCTCACCTGTTGTACGTTC 59.207 52.381 0.00 0.00 0.00 3.95
2995 8175 4.181578 GCTCACCTGTTGTACGTTCATAT 58.818 43.478 0.00 0.00 0.00 1.78
3044 8228 7.442364 GCTAGTTATGATTTCAGATGTTGCCTA 59.558 37.037 0.00 0.00 0.00 3.93
3120 8307 2.979240 AGGCTTCCGAGAACTGAAATC 58.021 47.619 0.00 0.00 0.00 2.17
3348 8539 0.745845 AAGGCATCGTAGGCTGCTTG 60.746 55.000 10.68 0.00 44.47 4.01
3355 8546 1.071605 CGTAGGCTGCTTGTGAGAAC 58.928 55.000 0.00 0.00 0.00 3.01
3379 8570 0.107410 TTTGTGTCGCCAGGTTGACT 60.107 50.000 13.28 0.00 36.10 3.41
3383 8574 2.280797 TCGCCAGGTTGACTGCAC 60.281 61.111 0.00 0.00 46.14 4.57
3384 8575 3.357079 CGCCAGGTTGACTGCACC 61.357 66.667 0.00 0.00 46.14 5.01
3528 8723 5.114785 TGAATACAAATTGTTGACGGGTG 57.885 39.130 3.17 0.00 38.20 4.61
3529 8724 3.569250 ATACAAATTGTTGACGGGTGC 57.431 42.857 3.17 0.00 38.20 5.01
3605 8802 1.338579 ACAAGTAGAAGCTCTGCCTGC 60.339 52.381 0.00 0.00 28.67 4.85
3675 8880 0.467384 TAGCCAGCCTCTGCATTCTC 59.533 55.000 0.00 0.00 41.13 2.87
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.971202 CGCCAACAATGACATTACCTTTATC 59.029 40.000 0.00 0.00 0.00 1.75
1 2 5.650266 TCGCCAACAATGACATTACCTTTAT 59.350 36.000 0.00 0.00 0.00 1.40
2 3 5.004448 TCGCCAACAATGACATTACCTTTA 58.996 37.500 0.00 0.00 0.00 1.85
5 6 3.066291 TCGCCAACAATGACATTACCT 57.934 42.857 0.00 0.00 0.00 3.08
6 7 5.493133 TTATCGCCAACAATGACATTACC 57.507 39.130 0.00 0.00 0.00 2.85
7 8 7.192913 TCAATTATCGCCAACAATGACATTAC 58.807 34.615 0.00 0.00 0.00 1.89
8 9 7.326968 TCAATTATCGCCAACAATGACATTA 57.673 32.000 0.00 0.00 0.00 1.90
9 10 6.206395 TCAATTATCGCCAACAATGACATT 57.794 33.333 0.00 0.00 0.00 2.71
10 11 5.833406 TCAATTATCGCCAACAATGACAT 57.167 34.783 0.00 0.00 0.00 3.06
11 12 5.635417 TTCAATTATCGCCAACAATGACA 57.365 34.783 0.00 0.00 0.00 3.58
12 13 6.321717 TCTTTCAATTATCGCCAACAATGAC 58.678 36.000 0.00 0.00 0.00 3.06
13 14 6.507958 TCTTTCAATTATCGCCAACAATGA 57.492 33.333 0.00 0.00 0.00 2.57
14 15 7.488792 TCAATCTTTCAATTATCGCCAACAATG 59.511 33.333 0.00 0.00 0.00 2.82
15 16 7.546358 TCAATCTTTCAATTATCGCCAACAAT 58.454 30.769 0.00 0.00 0.00 2.71
16 17 6.918626 TCAATCTTTCAATTATCGCCAACAA 58.081 32.000 0.00 0.00 0.00 2.83
17 18 6.507958 TCAATCTTTCAATTATCGCCAACA 57.492 33.333 0.00 0.00 0.00 3.33
18 19 7.992180 AATCAATCTTTCAATTATCGCCAAC 57.008 32.000 0.00 0.00 0.00 3.77
19 20 8.902806 ACTAATCAATCTTTCAATTATCGCCAA 58.097 29.630 0.00 0.00 0.00 4.52
20 21 8.344831 CACTAATCAATCTTTCAATTATCGCCA 58.655 33.333 0.00 0.00 0.00 5.69
21 22 8.345565 ACACTAATCAATCTTTCAATTATCGCC 58.654 33.333 0.00 0.00 0.00 5.54
22 23 9.162793 CACACTAATCAATCTTTCAATTATCGC 57.837 33.333 0.00 0.00 0.00 4.58
23 24 9.162793 GCACACTAATCAATCTTTCAATTATCG 57.837 33.333 0.00 0.00 0.00 2.92
26 27 9.230122 TCAGCACACTAATCAATCTTTCAATTA 57.770 29.630 0.00 0.00 0.00 1.40
27 28 8.114331 TCAGCACACTAATCAATCTTTCAATT 57.886 30.769 0.00 0.00 0.00 2.32
28 29 7.692460 TCAGCACACTAATCAATCTTTCAAT 57.308 32.000 0.00 0.00 0.00 2.57
29 30 7.175467 ACATCAGCACACTAATCAATCTTTCAA 59.825 33.333 0.00 0.00 0.00 2.69
30 31 6.656270 ACATCAGCACACTAATCAATCTTTCA 59.344 34.615 0.00 0.00 0.00 2.69
31 32 7.081526 ACATCAGCACACTAATCAATCTTTC 57.918 36.000 0.00 0.00 0.00 2.62
32 33 6.094603 GGACATCAGCACACTAATCAATCTTT 59.905 38.462 0.00 0.00 0.00 2.52
33 34 5.587844 GGACATCAGCACACTAATCAATCTT 59.412 40.000 0.00 0.00 0.00 2.40
34 35 5.104610 AGGACATCAGCACACTAATCAATCT 60.105 40.000 0.00 0.00 0.00 2.40
35 36 5.007430 CAGGACATCAGCACACTAATCAATC 59.993 44.000 0.00 0.00 0.00 2.67
36 37 4.880120 CAGGACATCAGCACACTAATCAAT 59.120 41.667 0.00 0.00 0.00 2.57
37 38 4.020307 TCAGGACATCAGCACACTAATCAA 60.020 41.667 0.00 0.00 0.00 2.57
38 39 3.515104 TCAGGACATCAGCACACTAATCA 59.485 43.478 0.00 0.00 0.00 2.57
39 40 3.868077 GTCAGGACATCAGCACACTAATC 59.132 47.826 0.00 0.00 0.00 1.75
40 41 3.677148 CGTCAGGACATCAGCACACTAAT 60.677 47.826 0.00 0.00 0.00 1.73
41 42 2.352715 CGTCAGGACATCAGCACACTAA 60.353 50.000 0.00 0.00 0.00 2.24
42 43 1.202348 CGTCAGGACATCAGCACACTA 59.798 52.381 0.00 0.00 0.00 2.74
43 44 0.037882 CGTCAGGACATCAGCACACT 60.038 55.000 0.00 0.00 0.00 3.55
44 45 1.016130 CCGTCAGGACATCAGCACAC 61.016 60.000 0.00 0.00 41.02 3.82
45 46 1.293179 CCGTCAGGACATCAGCACA 59.707 57.895 0.00 0.00 41.02 4.57
46 47 2.103042 GCCGTCAGGACATCAGCAC 61.103 63.158 0.00 0.00 41.02 4.40
47 48 0.970427 TAGCCGTCAGGACATCAGCA 60.970 55.000 0.00 0.00 41.02 4.41
48 49 0.249238 CTAGCCGTCAGGACATCAGC 60.249 60.000 0.00 0.00 41.02 4.26
49 50 1.107114 ACTAGCCGTCAGGACATCAG 58.893 55.000 0.00 0.00 41.02 2.90
50 51 1.557099 AACTAGCCGTCAGGACATCA 58.443 50.000 0.00 0.00 41.02 3.07
51 52 2.673368 CAAAACTAGCCGTCAGGACATC 59.327 50.000 0.00 0.00 41.02 3.06
52 53 2.615493 CCAAAACTAGCCGTCAGGACAT 60.615 50.000 0.00 0.00 41.02 3.06
53 54 1.270625 CCAAAACTAGCCGTCAGGACA 60.271 52.381 0.00 0.00 41.02 4.02
54 55 1.439679 CCAAAACTAGCCGTCAGGAC 58.560 55.000 0.00 0.00 41.02 3.85
55 56 0.321298 GCCAAAACTAGCCGTCAGGA 60.321 55.000 0.00 0.00 41.02 3.86
56 57 0.605319 TGCCAAAACTAGCCGTCAGG 60.605 55.000 0.00 0.00 41.62 3.86
57 58 0.517316 GTGCCAAAACTAGCCGTCAG 59.483 55.000 0.00 0.00 0.00 3.51
58 59 0.107831 AGTGCCAAAACTAGCCGTCA 59.892 50.000 0.00 0.00 0.00 4.35
59 60 2.088950 TAGTGCCAAAACTAGCCGTC 57.911 50.000 0.00 0.00 0.00 4.79
60 61 2.554370 TTAGTGCCAAAACTAGCCGT 57.446 45.000 0.00 0.00 34.24 5.68
61 62 3.907894 TTTTAGTGCCAAAACTAGCCG 57.092 42.857 0.00 0.00 34.24 5.52
62 63 4.857037 CGAATTTTAGTGCCAAAACTAGCC 59.143 41.667 0.00 0.00 34.24 3.93
63 64 4.857037 CCGAATTTTAGTGCCAAAACTAGC 59.143 41.667 0.00 0.00 34.24 3.42
64 65 4.857037 GCCGAATTTTAGTGCCAAAACTAG 59.143 41.667 0.00 0.00 34.24 2.57
65 66 4.521256 AGCCGAATTTTAGTGCCAAAACTA 59.479 37.500 0.00 0.00 30.57 2.24
66 67 3.320826 AGCCGAATTTTAGTGCCAAAACT 59.679 39.130 0.00 0.00 30.57 2.66
67 68 3.649073 AGCCGAATTTTAGTGCCAAAAC 58.351 40.909 0.00 0.00 30.57 2.43
68 69 4.329462 AAGCCGAATTTTAGTGCCAAAA 57.671 36.364 0.00 0.00 0.00 2.44
69 70 5.417580 AGATAAGCCGAATTTTAGTGCCAAA 59.582 36.000 0.00 0.00 0.00 3.28
70 71 4.947388 AGATAAGCCGAATTTTAGTGCCAA 59.053 37.500 0.00 0.00 0.00 4.52
71 72 4.523083 AGATAAGCCGAATTTTAGTGCCA 58.477 39.130 0.00 0.00 0.00 4.92
72 73 4.816925 AGAGATAAGCCGAATTTTAGTGCC 59.183 41.667 0.00 0.00 0.00 5.01
73 74 5.993106 AGAGATAAGCCGAATTTTAGTGC 57.007 39.130 0.00 0.00 0.00 4.40
74 75 7.539712 TCAAGAGATAAGCCGAATTTTAGTG 57.460 36.000 0.00 0.00 0.00 2.74
75 76 6.258947 GCTCAAGAGATAAGCCGAATTTTAGT 59.741 38.462 0.32 0.00 0.00 2.24
76 77 6.258727 TGCTCAAGAGATAAGCCGAATTTTAG 59.741 38.462 0.32 0.00 35.12 1.85
77 78 6.112734 TGCTCAAGAGATAAGCCGAATTTTA 58.887 36.000 0.32 0.00 35.12 1.52
78 79 4.943705 TGCTCAAGAGATAAGCCGAATTTT 59.056 37.500 0.32 0.00 35.12 1.82
79 80 4.517285 TGCTCAAGAGATAAGCCGAATTT 58.483 39.130 0.32 0.00 35.12 1.82
80 81 4.142609 TGCTCAAGAGATAAGCCGAATT 57.857 40.909 0.32 0.00 35.12 2.17
81 82 3.827008 TGCTCAAGAGATAAGCCGAAT 57.173 42.857 0.32 0.00 35.12 3.34
82 83 3.610040 TTGCTCAAGAGATAAGCCGAA 57.390 42.857 0.32 0.00 35.12 4.30
83 84 3.610040 TTTGCTCAAGAGATAAGCCGA 57.390 42.857 0.32 0.00 35.12 5.54
84 85 3.064545 CCTTTTGCTCAAGAGATAAGCCG 59.935 47.826 0.32 0.00 35.12 5.52
85 86 3.181492 GCCTTTTGCTCAAGAGATAAGCC 60.181 47.826 0.32 0.00 35.12 4.35
86 87 3.486542 CGCCTTTTGCTCAAGAGATAAGC 60.487 47.826 0.32 0.00 38.05 3.09
87 88 3.064545 CCGCCTTTTGCTCAAGAGATAAG 59.935 47.826 0.32 1.16 38.05 1.73
88 89 3.009723 CCGCCTTTTGCTCAAGAGATAA 58.990 45.455 0.32 0.00 38.05 1.75
89 90 2.632377 CCGCCTTTTGCTCAAGAGATA 58.368 47.619 0.32 0.00 38.05 1.98
90 91 1.457346 CCGCCTTTTGCTCAAGAGAT 58.543 50.000 0.32 0.00 38.05 2.75
91 92 0.606401 CCCGCCTTTTGCTCAAGAGA 60.606 55.000 0.32 0.00 38.05 3.10
92 93 1.878775 CCCGCCTTTTGCTCAAGAG 59.121 57.895 0.00 0.00 38.05 2.85
93 94 2.268076 GCCCGCCTTTTGCTCAAGA 61.268 57.895 0.00 0.00 38.05 3.02
94 95 2.259511 GCCCGCCTTTTGCTCAAG 59.740 61.111 0.00 0.00 38.05 3.02
95 96 3.669344 CGCCCGCCTTTTGCTCAA 61.669 61.111 0.00 0.00 38.05 3.02
107 108 1.591504 AATAAGGTTGTTGCCGCCCG 61.592 55.000 0.00 0.00 0.00 6.13
108 109 1.465794 TAATAAGGTTGTTGCCGCCC 58.534 50.000 0.00 0.00 0.00 6.13
109 110 3.793797 AATAATAAGGTTGTTGCCGCC 57.206 42.857 0.00 0.00 0.00 6.13
110 111 7.764695 AAATTAATAATAAGGTTGTTGCCGC 57.235 32.000 0.00 0.00 0.00 6.53
111 112 9.360093 TCAAAATTAATAATAAGGTTGTTGCCG 57.640 29.630 0.00 0.00 0.00 5.69
129 130 9.402320 TCGATGACCTCCAAATTATCAAAATTA 57.598 29.630 0.00 0.00 0.00 1.40
130 131 8.190784 GTCGATGACCTCCAAATTATCAAAATT 58.809 33.333 0.00 0.00 0.00 1.82
131 132 7.339212 TGTCGATGACCTCCAAATTATCAAAAT 59.661 33.333 0.00 0.00 0.00 1.82
132 133 6.657117 TGTCGATGACCTCCAAATTATCAAAA 59.343 34.615 0.00 0.00 0.00 2.44
133 134 6.093495 GTGTCGATGACCTCCAAATTATCAAA 59.907 38.462 0.00 0.00 0.00 2.69
134 135 5.584649 GTGTCGATGACCTCCAAATTATCAA 59.415 40.000 0.00 0.00 0.00 2.57
135 136 5.116180 GTGTCGATGACCTCCAAATTATCA 58.884 41.667 0.00 0.00 0.00 2.15
136 137 4.511826 GGTGTCGATGACCTCCAAATTATC 59.488 45.833 8.89 0.00 0.00 1.75
137 138 4.080582 TGGTGTCGATGACCTCCAAATTAT 60.081 41.667 15.43 0.00 34.57 1.28
138 139 3.262151 TGGTGTCGATGACCTCCAAATTA 59.738 43.478 15.43 0.00 34.57 1.40
139 140 2.039746 TGGTGTCGATGACCTCCAAATT 59.960 45.455 15.43 0.00 34.57 1.82
140 141 1.628340 TGGTGTCGATGACCTCCAAAT 59.372 47.619 15.43 0.00 34.57 2.32
141 142 1.052617 TGGTGTCGATGACCTCCAAA 58.947 50.000 15.43 0.00 34.57 3.28
142 143 1.066215 CATGGTGTCGATGACCTCCAA 60.066 52.381 15.43 0.00 38.33 3.53
143 144 0.536724 CATGGTGTCGATGACCTCCA 59.463 55.000 15.43 7.40 38.82 3.86
144 145 0.824109 TCATGGTGTCGATGACCTCC 59.176 55.000 15.43 2.25 34.26 4.30
145 146 2.166459 TCTTCATGGTGTCGATGACCTC 59.834 50.000 15.43 0.00 34.26 3.85
146 147 2.167281 CTCTTCATGGTGTCGATGACCT 59.833 50.000 15.43 1.86 34.26 3.85
147 148 2.093973 ACTCTTCATGGTGTCGATGACC 60.094 50.000 9.17 9.17 29.39 4.02
148 149 2.926200 CACTCTTCATGGTGTCGATGAC 59.074 50.000 0.00 0.00 29.39 3.06
149 150 2.562738 ACACTCTTCATGGTGTCGATGA 59.437 45.455 0.21 0.00 42.09 2.92
150 151 2.964740 ACACTCTTCATGGTGTCGATG 58.035 47.619 0.21 0.00 42.09 3.84
151 152 3.131223 CCTACACTCTTCATGGTGTCGAT 59.869 47.826 8.49 0.00 44.23 3.59
152 153 2.492088 CCTACACTCTTCATGGTGTCGA 59.508 50.000 8.49 0.00 44.23 4.20
153 154 2.492088 TCCTACACTCTTCATGGTGTCG 59.508 50.000 8.49 3.75 44.23 4.35
154 155 4.021016 ACTTCCTACACTCTTCATGGTGTC 60.021 45.833 8.49 0.00 44.23 3.67
155 156 3.904339 ACTTCCTACACTCTTCATGGTGT 59.096 43.478 9.86 9.86 46.52 4.16
156 157 4.543590 ACTTCCTACACTCTTCATGGTG 57.456 45.455 0.00 0.00 39.13 4.17
157 158 4.020128 GGAACTTCCTACACTCTTCATGGT 60.020 45.833 0.00 0.00 32.53 3.55
158 159 4.508662 GGAACTTCCTACACTCTTCATGG 58.491 47.826 0.00 0.00 32.53 3.66
159 160 4.177026 CGGAACTTCCTACACTCTTCATG 58.823 47.826 6.25 0.00 33.30 3.07
160 161 3.368531 GCGGAACTTCCTACACTCTTCAT 60.369 47.826 6.25 0.00 33.30 2.57
161 162 2.029290 GCGGAACTTCCTACACTCTTCA 60.029 50.000 6.25 0.00 33.30 3.02
162 163 2.608268 GCGGAACTTCCTACACTCTTC 58.392 52.381 6.25 0.00 33.30 2.87
163 164 1.067776 CGCGGAACTTCCTACACTCTT 60.068 52.381 0.00 0.00 33.30 2.85
164 165 0.526662 CGCGGAACTTCCTACACTCT 59.473 55.000 0.00 0.00 33.30 3.24
165 166 0.458025 CCGCGGAACTTCCTACACTC 60.458 60.000 24.07 0.00 33.30 3.51
166 167 1.590147 CCGCGGAACTTCCTACACT 59.410 57.895 24.07 0.00 33.30 3.55
167 168 1.447314 CCCGCGGAACTTCCTACAC 60.447 63.158 30.73 0.00 33.30 2.90
168 169 1.601419 CTCCCGCGGAACTTCCTACA 61.601 60.000 30.73 0.00 33.30 2.74
169 170 1.141234 CTCCCGCGGAACTTCCTAC 59.859 63.158 30.73 0.00 33.30 3.18
170 171 1.304713 ACTCCCGCGGAACTTCCTA 60.305 57.895 30.73 0.00 33.30 2.94
171 172 2.603776 ACTCCCGCGGAACTTCCT 60.604 61.111 30.73 0.00 33.30 3.36
172 173 2.434359 CACTCCCGCGGAACTTCC 60.434 66.667 30.73 0.00 0.00 3.46
173 174 3.119096 GCACTCCCGCGGAACTTC 61.119 66.667 30.73 8.93 0.00 3.01
174 175 4.699522 GGCACTCCCGCGGAACTT 62.700 66.667 30.73 4.42 0.00 2.66
184 185 3.723348 GTTCGTTGCCGGCACTCC 61.723 66.667 32.95 19.14 33.95 3.85
185 186 2.954753 CTGTTCGTTGCCGGCACTC 61.955 63.158 32.95 23.72 33.95 3.51
186 187 2.972505 CTGTTCGTTGCCGGCACT 60.973 61.111 32.95 0.00 33.95 4.40
187 188 4.025401 CCTGTTCGTTGCCGGCAC 62.025 66.667 32.95 22.80 33.95 5.01
214 215 4.722700 AGTGTCACGCCATGGCCC 62.723 66.667 30.79 16.17 37.98 5.80
215 216 3.434319 CAGTGTCACGCCATGGCC 61.434 66.667 30.79 17.06 37.98 5.36
216 217 3.434319 CCAGTGTCACGCCATGGC 61.434 66.667 27.67 27.67 37.85 4.40
217 218 2.178876 TACCCAGTGTCACGCCATGG 62.179 60.000 7.63 7.63 0.00 3.66
218 219 1.019278 GTACCCAGTGTCACGCCATG 61.019 60.000 0.00 0.00 0.00 3.66
219 220 1.295423 GTACCCAGTGTCACGCCAT 59.705 57.895 0.00 0.00 0.00 4.40
220 221 1.476845 ATGTACCCAGTGTCACGCCA 61.477 55.000 0.00 0.00 0.00 5.69
221 222 0.739813 GATGTACCCAGTGTCACGCC 60.740 60.000 0.00 0.00 0.00 5.68
222 223 1.076533 CGATGTACCCAGTGTCACGC 61.077 60.000 0.00 0.00 0.00 5.34
223 224 0.242825 ACGATGTACCCAGTGTCACG 59.757 55.000 0.00 0.00 0.00 4.35
224 225 1.671850 CCACGATGTACCCAGTGTCAC 60.672 57.143 0.00 0.00 33.14 3.67
225 226 0.606096 CCACGATGTACCCAGTGTCA 59.394 55.000 9.70 0.00 33.14 3.58
226 227 0.892755 TCCACGATGTACCCAGTGTC 59.107 55.000 9.70 0.00 33.14 3.67
227 228 1.207089 CATCCACGATGTACCCAGTGT 59.793 52.381 9.70 0.00 35.54 3.55
228 229 1.480545 TCATCCACGATGTACCCAGTG 59.519 52.381 0.00 0.00 40.55 3.66
229 230 1.757118 CTCATCCACGATGTACCCAGT 59.243 52.381 0.00 0.00 40.55 4.00
230 231 2.031870 TCTCATCCACGATGTACCCAG 58.968 52.381 0.00 0.00 40.55 4.45
231 232 2.153034 TCTCATCCACGATGTACCCA 57.847 50.000 0.00 0.00 40.55 4.51
232 233 3.393800 CATTCTCATCCACGATGTACCC 58.606 50.000 0.00 0.00 40.55 3.69
233 234 2.802816 GCATTCTCATCCACGATGTACC 59.197 50.000 0.00 0.00 40.55 3.34
234 235 2.802816 GGCATTCTCATCCACGATGTAC 59.197 50.000 0.00 0.00 40.55 2.90
235 236 2.433970 TGGCATTCTCATCCACGATGTA 59.566 45.455 0.00 0.00 40.55 2.29
236 237 1.210234 TGGCATTCTCATCCACGATGT 59.790 47.619 0.00 0.00 40.55 3.06
237 238 1.600957 GTGGCATTCTCATCCACGATG 59.399 52.381 0.00 0.00 40.54 3.84
238 239 1.959042 GTGGCATTCTCATCCACGAT 58.041 50.000 0.00 0.00 40.54 3.73
239 240 3.458872 GTGGCATTCTCATCCACGA 57.541 52.632 0.00 0.00 40.54 4.35
242 243 0.994247 ACTGGTGGCATTCTCATCCA 59.006 50.000 0.00 0.00 0.00 3.41
243 244 1.747355 CAACTGGTGGCATTCTCATCC 59.253 52.381 0.00 0.00 0.00 3.51
244 245 1.133790 GCAACTGGTGGCATTCTCATC 59.866 52.381 0.00 0.00 0.00 2.92
245 246 1.180029 GCAACTGGTGGCATTCTCAT 58.820 50.000 0.00 0.00 0.00 2.90
246 247 1.236616 CGCAACTGGTGGCATTCTCA 61.237 55.000 0.00 0.00 0.00 3.27
247 248 1.503542 CGCAACTGGTGGCATTCTC 59.496 57.895 0.00 0.00 0.00 2.87
248 249 2.629656 GCGCAACTGGTGGCATTCT 61.630 57.895 0.30 0.00 0.00 2.40
249 250 2.126346 GCGCAACTGGTGGCATTC 60.126 61.111 0.30 0.00 0.00 2.67
250 251 4.041917 CGCGCAACTGGTGGCATT 62.042 61.111 8.75 0.00 0.00 3.56
254 255 3.583276 TAGGACGCGCAACTGGTGG 62.583 63.158 5.73 0.00 0.00 4.61
255 256 2.048597 TAGGACGCGCAACTGGTG 60.049 61.111 5.73 0.00 0.00 4.17
256 257 2.048503 GTAGGACGCGCAACTGGT 60.049 61.111 5.73 0.00 0.00 4.00
257 258 2.048597 TGTAGGACGCGCAACTGG 60.049 61.111 5.73 0.00 0.00 4.00
258 259 2.716828 CGTGTAGGACGCGCAACTG 61.717 63.158 5.73 0.00 45.29 3.16
259 260 2.430244 CGTGTAGGACGCGCAACT 60.430 61.111 5.73 4.24 45.29 3.16
266 267 5.594860 CAAATTTTTGTGGCGTGTAGGACG 61.595 45.833 0.00 0.00 40.92 4.79
267 268 3.636282 AATTTTTGTGGCGTGTAGGAC 57.364 42.857 0.00 0.00 0.00 3.85
268 269 3.971150 CAAATTTTTGTGGCGTGTAGGA 58.029 40.909 0.00 0.00 33.59 2.94
280 281 4.208047 TCATCGCGACCAAACAAATTTTTG 59.792 37.500 12.93 0.00 43.62 2.44
281 282 4.363999 TCATCGCGACCAAACAAATTTTT 58.636 34.783 12.93 0.00 0.00 1.94
282 283 3.971150 TCATCGCGACCAAACAAATTTT 58.029 36.364 12.93 0.00 0.00 1.82
283 284 3.634568 TCATCGCGACCAAACAAATTT 57.365 38.095 12.93 0.00 0.00 1.82
284 285 3.190327 TCATCATCGCGACCAAACAAATT 59.810 39.130 12.93 0.00 0.00 1.82
285 286 2.746904 TCATCATCGCGACCAAACAAAT 59.253 40.909 12.93 0.00 0.00 2.32
286 287 2.095969 GTCATCATCGCGACCAAACAAA 60.096 45.455 12.93 0.00 0.00 2.83
287 288 1.463056 GTCATCATCGCGACCAAACAA 59.537 47.619 12.93 0.00 0.00 2.83
288 289 1.075542 GTCATCATCGCGACCAAACA 58.924 50.000 12.93 0.00 0.00 2.83
289 290 3.877801 GTCATCATCGCGACCAAAC 57.122 52.632 12.93 2.50 0.00 2.93
294 295 2.582959 GTGAGGTCATCATCGCGAC 58.417 57.895 12.93 0.00 40.92 5.19
297 298 2.582959 GACGTGAGGTCATCATCGC 58.417 57.895 0.00 0.00 45.36 4.58
305 306 4.736896 GCCGGTGGACGTGAGGTC 62.737 72.222 1.90 0.00 45.31 3.85
325 326 0.033503 TGGAGTCTGCGACCTATCCA 60.034 55.000 11.39 11.39 33.84 3.41
329 330 0.541063 TTGGTGGAGTCTGCGACCTA 60.541 55.000 12.02 4.57 32.18 3.08
344 345 1.492176 CATGCCCTACTCATCCTTGGT 59.508 52.381 0.00 0.00 0.00 3.67
354 355 0.475906 GCATCCTTCCATGCCCTACT 59.524 55.000 0.00 0.00 43.03 2.57
365 366 0.038166 TGGGACACAAGGCATCCTTC 59.962 55.000 0.00 0.00 42.67 3.46
366 367 0.482446 TTGGGACACAAGGCATCCTT 59.518 50.000 0.00 0.00 45.88 3.36
383 389 3.584868 GACGGACCGGACCCACTTG 62.585 68.421 20.00 5.34 0.00 3.16
384 390 3.308705 GACGGACCGGACCCACTT 61.309 66.667 20.00 0.00 0.00 3.16
385 391 4.296729 AGACGGACCGGACCCACT 62.297 66.667 20.00 13.20 0.00 4.00
386 392 3.756727 GAGACGGACCGGACCCAC 61.757 72.222 20.00 11.16 0.00 4.61
390 396 2.758737 ATGGGAGACGGACCGGAC 60.759 66.667 20.00 11.88 0.00 4.79
392 398 2.573609 GAACATGGGAGACGGACCGG 62.574 65.000 20.00 0.00 0.00 5.28
393 399 1.153628 GAACATGGGAGACGGACCG 60.154 63.158 13.61 13.61 0.00 4.79
394 400 1.136500 GTAGAACATGGGAGACGGACC 59.864 57.143 0.00 0.00 0.00 4.46
395 401 2.100989 AGTAGAACATGGGAGACGGAC 58.899 52.381 0.00 0.00 0.00 4.79
396 402 2.526888 AGTAGAACATGGGAGACGGA 57.473 50.000 0.00 0.00 0.00 4.69
397 403 4.262079 GGAATAGTAGAACATGGGAGACGG 60.262 50.000 0.00 0.00 0.00 4.79
416 422 0.036732 TGCGGTCTTCAGCAAGGAAT 59.963 50.000 0.00 0.00 41.28 3.01
422 428 1.301716 GAAGGTGCGGTCTTCAGCA 60.302 57.895 8.13 0.00 41.89 4.41
423 429 1.301716 TGAAGGTGCGGTCTTCAGC 60.302 57.895 10.74 0.00 43.70 4.26
427 433 1.880027 GTGAAATGAAGGTGCGGTCTT 59.120 47.619 0.00 0.00 0.00 3.01
428 434 1.523758 GTGAAATGAAGGTGCGGTCT 58.476 50.000 0.00 0.00 0.00 3.85
429 435 0.165944 CGTGAAATGAAGGTGCGGTC 59.834 55.000 0.00 0.00 0.00 4.79
430 436 1.234615 CCGTGAAATGAAGGTGCGGT 61.235 55.000 0.00 0.00 33.87 5.68
431 437 1.501741 CCGTGAAATGAAGGTGCGG 59.498 57.895 0.00 0.00 0.00 5.69
442 448 1.959226 GGCGACAAGAGCCGTGAAA 60.959 57.895 0.00 0.00 45.58 2.69
450 456 2.811317 GACTGGCGGCGACAAGAG 60.811 66.667 19.53 8.13 0.00 2.85
455 461 4.451150 TCCATGACTGGCGGCGAC 62.451 66.667 12.98 9.31 42.80 5.19
458 464 2.512515 GTCTCCATGACTGGCGGC 60.513 66.667 0.00 0.00 42.80 6.53
462 468 1.153489 CTGCCGTCTCCATGACTGG 60.153 63.158 0.00 0.00 43.25 4.00
463 469 0.463204 ATCTGCCGTCTCCATGACTG 59.537 55.000 0.00 0.00 43.25 3.51
464 470 0.463204 CATCTGCCGTCTCCATGACT 59.537 55.000 0.00 0.00 43.25 3.41
465 471 0.531532 CCATCTGCCGTCTCCATGAC 60.532 60.000 0.00 0.00 42.06 3.06
470 476 1.758514 TCCTCCATCTGCCGTCTCC 60.759 63.158 0.00 0.00 0.00 3.71
476 482 3.157217 ATCGCGTCCTCCATCTGCC 62.157 63.158 5.77 0.00 0.00 4.85
479 485 3.034878 CGATCGCGTCCTCCATCT 58.965 61.111 5.77 0.00 0.00 2.90
493 499 1.376812 GTTGTTCCCTTCCGGCGAT 60.377 57.895 9.30 0.00 0.00 4.58
496 502 1.524008 CCTTGTTGTTCCCTTCCGGC 61.524 60.000 0.00 0.00 0.00 6.13
497 503 0.109723 TCCTTGTTGTTCCCTTCCGG 59.890 55.000 0.00 0.00 0.00 5.14
498 504 1.202770 AGTCCTTGTTGTTCCCTTCCG 60.203 52.381 0.00 0.00 0.00 4.30
527 533 3.178569 CTAGACTACGGCGGCGTCC 62.179 68.421 40.80 27.97 0.00 4.79
529 535 3.207669 CCTAGACTACGGCGGCGT 61.208 66.667 38.68 38.68 0.00 5.68
568 583 7.405469 TTCACATTTCGGACATTTTTCATTG 57.595 32.000 0.00 0.00 0.00 2.82
572 587 6.616260 GCACATTCACATTTCGGACATTTTTC 60.616 38.462 0.00 0.00 0.00 2.29
577 592 3.084039 AGCACATTCACATTTCGGACAT 58.916 40.909 0.00 0.00 0.00 3.06
592 607 1.065491 TCATACAAAGCCGGAGCACAT 60.065 47.619 5.05 0.00 43.56 3.21
593 608 0.323302 TCATACAAAGCCGGAGCACA 59.677 50.000 5.05 0.00 43.56 4.57
594 609 1.130561 GTTCATACAAAGCCGGAGCAC 59.869 52.381 5.05 0.00 43.56 4.40
595 610 1.271108 TGTTCATACAAAGCCGGAGCA 60.271 47.619 5.05 0.00 43.56 4.26
596 611 1.448985 TGTTCATACAAAGCCGGAGC 58.551 50.000 5.05 0.00 40.32 4.70
597 612 3.270027 TGATGTTCATACAAAGCCGGAG 58.730 45.455 5.05 0.00 37.91 4.63
599 614 3.003689 GGATGATGTTCATACAAAGCCGG 59.996 47.826 0.00 0.00 37.65 6.13
601 616 3.548818 GCGGATGATGTTCATACAAAGCC 60.549 47.826 0.97 0.00 37.57 4.35
602 617 3.313526 AGCGGATGATGTTCATACAAAGC 59.686 43.478 0.97 0.00 37.57 3.51
603 618 5.490139 AAGCGGATGATGTTCATACAAAG 57.510 39.130 0.97 0.00 37.57 2.77
613 630 3.696051 AGTTTATGCAAAGCGGATGATGT 59.304 39.130 0.00 0.00 0.00 3.06
614 631 4.297299 AGTTTATGCAAAGCGGATGATG 57.703 40.909 0.00 0.00 0.00 3.07
631 648 6.930371 GGTTTCAACTAACCGGACGAAGTTT 61.930 44.000 9.46 0.00 38.72 2.66
634 651 2.477754 GGTTTCAACTAACCGGACGAAG 59.522 50.000 9.46 1.59 38.33 3.79
641 658 0.604511 AGCCGGGTTTCAACTAACCG 60.605 55.000 0.00 0.00 46.93 4.44
643 660 2.223745 TCAAGCCGGGTTTCAACTAAC 58.776 47.619 18.04 0.00 0.00 2.34
646 663 1.407618 GTTTCAAGCCGGGTTTCAACT 59.592 47.619 18.04 0.00 0.00 3.16
654 671 1.427819 GCATACGTTTCAAGCCGGG 59.572 57.895 2.18 0.00 0.00 5.73
655 672 1.060308 CGCATACGTTTCAAGCCGG 59.940 57.895 0.00 0.00 33.53 6.13
656 673 4.643675 CGCATACGTTTCAAGCCG 57.356 55.556 0.00 0.00 33.53 5.52
672 689 5.178067 GGAACCGGTAATCCAATGTTATACG 59.822 44.000 18.73 0.00 35.71 3.06
674 691 5.623169 GGGAACCGGTAATCCAATGTTATA 58.377 41.667 23.67 0.00 40.86 0.98
675 692 4.466827 GGGAACCGGTAATCCAATGTTAT 58.533 43.478 23.67 0.00 40.86 1.89
678 695 2.430248 GGGAACCGGTAATCCAATGT 57.570 50.000 23.67 0.00 40.86 2.71
704 721 2.951475 TTTCCACCAGTCCACGGCAC 62.951 60.000 0.00 0.00 0.00 5.01
705 722 2.674563 CTTTCCACCAGTCCACGGCA 62.675 60.000 0.00 0.00 0.00 5.69
706 723 1.966451 CTTTCCACCAGTCCACGGC 60.966 63.158 0.00 0.00 0.00 5.68
707 724 0.602905 GACTTTCCACCAGTCCACGG 60.603 60.000 0.00 0.00 35.53 4.94
708 725 0.393077 AGACTTTCCACCAGTCCACG 59.607 55.000 0.00 0.00 41.55 4.94
709 726 1.416401 TCAGACTTTCCACCAGTCCAC 59.584 52.381 0.00 0.00 41.55 4.02
710 727 1.694150 CTCAGACTTTCCACCAGTCCA 59.306 52.381 0.00 0.00 41.55 4.02
711 728 1.002544 CCTCAGACTTTCCACCAGTCC 59.997 57.143 0.00 0.00 41.55 3.85
712 729 1.971357 TCCTCAGACTTTCCACCAGTC 59.029 52.381 0.00 0.00 41.02 3.51
713 730 1.694696 GTCCTCAGACTTTCCACCAGT 59.305 52.381 0.00 0.00 40.10 4.00
714 731 1.694150 TGTCCTCAGACTTTCCACCAG 59.306 52.381 0.00 0.00 43.91 4.00
715 732 1.694150 CTGTCCTCAGACTTTCCACCA 59.306 52.381 0.00 0.00 43.91 4.17
716 733 1.971357 TCTGTCCTCAGACTTTCCACC 59.029 52.381 0.00 0.00 44.58 4.61
726 743 0.459237 GACACCGCATCTGTCCTCAG 60.459 60.000 0.00 0.00 42.54 3.35
727 744 1.591703 GACACCGCATCTGTCCTCA 59.408 57.895 0.00 0.00 33.23 3.86
731 748 0.320771 AACTGGACACCGCATCTGTC 60.321 55.000 0.00 0.00 37.84 3.51
734 751 0.108138 GCTAACTGGACACCGCATCT 60.108 55.000 0.00 0.00 0.00 2.90
735 752 1.421410 CGCTAACTGGACACCGCATC 61.421 60.000 0.00 0.00 0.00 3.91
737 754 2.048597 CGCTAACTGGACACCGCA 60.049 61.111 0.00 0.00 0.00 5.69
742 759 1.972198 CTGACCCGCTAACTGGACA 59.028 57.895 0.00 0.00 0.00 4.02
743 760 1.448013 GCTGACCCGCTAACTGGAC 60.448 63.158 0.00 0.00 0.00 4.02
744 761 2.978824 GCTGACCCGCTAACTGGA 59.021 61.111 0.00 0.00 0.00 3.86
746 763 1.374252 AACGCTGACCCGCTAACTG 60.374 57.895 0.00 0.00 0.00 3.16
748 765 2.388232 CCAACGCTGACCCGCTAAC 61.388 63.158 0.00 0.00 0.00 2.34
766 783 1.601166 AAACACAAGTTAGGGCGTCC 58.399 50.000 0.00 0.00 36.84 4.79
767 784 2.287368 CCAAAACACAAGTTAGGGCGTC 60.287 50.000 0.00 0.00 36.84 5.19
768 785 1.679153 CCAAAACACAAGTTAGGGCGT 59.321 47.619 0.00 0.00 36.84 5.68
769 786 1.000717 CCCAAAACACAAGTTAGGGCG 60.001 52.381 6.05 0.00 42.60 6.13
770 787 1.343142 CCCCAAAACACAAGTTAGGGC 59.657 52.381 11.28 0.00 45.19 5.19
771 788 2.952116 TCCCCAAAACACAAGTTAGGG 58.048 47.619 10.26 10.26 45.69 3.53
840 923 4.589675 TGGTTTGGTGGGGTCGGC 62.590 66.667 0.00 0.00 0.00 5.54
842 925 1.302511 CTCTGGTTTGGTGGGGTCG 60.303 63.158 0.00 0.00 0.00 4.79
943 1186 2.275445 CTTTCTTTCTCGCGCGCG 60.275 61.111 44.84 44.84 41.35 6.86
944 1187 1.057976 CTCTTTCTTTCTCGCGCGC 59.942 57.895 27.95 23.91 0.00 6.86
945 1188 0.732880 TCCTCTTTCTTTCTCGCGCG 60.733 55.000 26.76 26.76 0.00 6.86
946 1189 0.995728 CTCCTCTTTCTTTCTCGCGC 59.004 55.000 0.00 0.00 0.00 6.86
1262 2387 6.403964 CCAAAATCGCAGATCTGAATGAAGAA 60.404 38.462 27.04 2.00 45.12 2.52
1286 2411 3.211963 CACAGCTAATGGCCGCCC 61.212 66.667 7.03 0.00 43.05 6.13
1287 2412 1.312371 TTTCACAGCTAATGGCCGCC 61.312 55.000 1.04 1.04 43.05 6.13
1288 2413 0.740737 ATTTCACAGCTAATGGCCGC 59.259 50.000 0.00 0.00 43.05 6.53
1289 2414 1.334869 GGATTTCACAGCTAATGGCCG 59.665 52.381 0.00 0.00 43.05 6.13
1335 2512 6.808008 AATCAAGAACCACACATCAACTAG 57.192 37.500 0.00 0.00 0.00 2.57
1337 2514 5.829924 AGAAATCAAGAACCACACATCAACT 59.170 36.000 0.00 0.00 0.00 3.16
1338 2515 6.076981 AGAAATCAAGAACCACACATCAAC 57.923 37.500 0.00 0.00 0.00 3.18
1339 2516 6.072508 GCTAGAAATCAAGAACCACACATCAA 60.073 38.462 0.00 0.00 0.00 2.57
1344 2521 4.072131 TGGCTAGAAATCAAGAACCACAC 58.928 43.478 0.00 0.00 0.00 3.82
1348 2525 5.649831 ACTGATTGGCTAGAAATCAAGAACC 59.350 40.000 17.20 0.00 42.04 3.62
1359 2541 2.702478 CCCATCTGACTGATTGGCTAGA 59.298 50.000 0.00 0.00 32.22 2.43
1360 2542 2.437281 ACCCATCTGACTGATTGGCTAG 59.563 50.000 11.15 0.00 40.55 3.42
1379 2561 3.127533 GCCCACAGATCGTGCACC 61.128 66.667 12.15 0.00 44.91 5.01
1469 2651 7.865385 TGGCAGATTTCACTGTTTATTTAACAC 59.135 33.333 0.00 0.00 41.73 3.32
1470 2652 7.865385 GTGGCAGATTTCACTGTTTATTTAACA 59.135 33.333 0.00 0.00 44.31 2.41
1471 2653 7.865385 TGTGGCAGATTTCACTGTTTATTTAAC 59.135 33.333 0.00 0.00 39.73 2.01
1472 2654 7.946207 TGTGGCAGATTTCACTGTTTATTTAA 58.054 30.769 0.00 0.00 39.73 1.52
1473 2655 7.517614 TGTGGCAGATTTCACTGTTTATTTA 57.482 32.000 0.00 0.00 39.73 1.40
1474 2656 6.403866 TGTGGCAGATTTCACTGTTTATTT 57.596 33.333 0.00 0.00 39.73 1.40
1600 2798 6.487668 TGCATCAAGAGAGTTCTTCATCAAAA 59.512 34.615 0.00 0.00 41.71 2.44
1744 2964 3.195698 CTTAGGCTTGCCGCGACC 61.196 66.667 8.23 0.09 40.44 4.79
1762 3056 0.535102 CCTCATTGGTATGGTCGGGC 60.535 60.000 0.00 0.00 32.40 6.13
1804 3098 4.272991 GCAACCTTGATGATAGAAGCAGAG 59.727 45.833 0.00 0.00 0.00 3.35
1807 3101 3.691118 GTGCAACCTTGATGATAGAAGCA 59.309 43.478 0.00 0.00 0.00 3.91
1843 3137 2.493501 GGAGCCGTCCGGACTAAC 59.506 66.667 30.92 19.66 37.50 2.34
1941 3235 1.024579 CCACGTGTACAGCCCATTCC 61.025 60.000 15.65 0.00 0.00 3.01
1945 3239 3.108288 TTGCCACGTGTACAGCCCA 62.108 57.895 15.65 0.00 0.00 5.36
2042 3336 1.913762 CCACCGTCCTCCAGAACCT 60.914 63.158 0.00 0.00 0.00 3.50
2056 3350 1.740296 CACGGAACCGACATCCACC 60.740 63.158 20.14 0.00 42.83 4.61
2145 3446 4.406648 TCCATTACAGATAGCACACCAG 57.593 45.455 0.00 0.00 0.00 4.00
2148 3449 6.201806 GTCAGATTCCATTACAGATAGCACAC 59.798 42.308 0.00 0.00 0.00 3.82
2161 3462 3.617284 GGTAAACCCGTCAGATTCCATT 58.383 45.455 0.00 0.00 0.00 3.16
2176 3477 6.888088 AGTGGGTTACAATCTTATGGGTAAAC 59.112 38.462 0.00 0.00 33.71 2.01
2264 3565 0.882042 AACTGCAAGCAGACCAGTCG 60.882 55.000 27.17 0.65 46.30 4.18
2290 3591 4.527583 CCCCTGCTGAGCGCTCTC 62.528 72.222 35.27 26.31 40.11 3.20
2304 3605 2.751806 CTGTTGAGCTTCATCTTTCCCC 59.248 50.000 0.00 0.00 0.00 4.81
2351 3652 1.372087 GCACGCATTCCTGAAGGGAG 61.372 60.000 0.00 0.00 46.01 4.30
2386 3687 1.207089 TCATACAGCACTTCCCCTTCG 59.793 52.381 0.00 0.00 0.00 3.79
2446 3747 1.407851 GGAGTCAATGGCAGATCAGCA 60.408 52.381 12.54 0.00 35.83 4.41
2449 3750 1.407851 GCTGGAGTCAATGGCAGATCA 60.408 52.381 0.00 0.00 0.00 2.92
2458 3759 1.949799 ACCTCTCAGCTGGAGTCAAT 58.050 50.000 22.71 9.21 44.40 2.57
2582 3885 5.536260 TGAGTGAGAAAGATGTGAGAACTG 58.464 41.667 0.00 0.00 0.00 3.16
2584 3887 6.258727 TGTTTGAGTGAGAAAGATGTGAGAAC 59.741 38.462 0.00 0.00 0.00 3.01
2616 3919 1.035139 CCCTGAACCATAGGCATTGC 58.965 55.000 0.00 0.00 33.86 3.56
2622 3925 0.181350 GCAGGTCCCTGAACCATAGG 59.819 60.000 17.49 0.00 46.30 2.57
2760 4067 0.682209 GGGCCACAATCAGAGCATGT 60.682 55.000 4.39 0.00 0.00 3.21
2818 4125 1.669760 TTGTCGACAACATCCGGGC 60.670 57.895 26.53 0.00 37.82 6.13
2853 4163 1.067916 CGCCTTTGTTTGCTTGCCT 59.932 52.632 0.00 0.00 0.00 4.75
3063 8249 7.307870 CCTCTGCTATTGCTATTCATTCTGAAC 60.308 40.741 0.00 0.00 38.49 3.18
3080 8266 3.008813 CCTACCATGCATTCCTCTGCTAT 59.991 47.826 0.00 0.00 42.75 2.97
3081 8267 2.369860 CCTACCATGCATTCCTCTGCTA 59.630 50.000 0.00 0.00 42.75 3.49
3082 8268 1.142465 CCTACCATGCATTCCTCTGCT 59.858 52.381 0.00 0.00 42.75 4.24
3083 8269 1.602311 CCTACCATGCATTCCTCTGC 58.398 55.000 0.00 0.00 42.62 4.26
3084 8270 1.142465 AGCCTACCATGCATTCCTCTG 59.858 52.381 0.00 0.00 0.00 3.35
3085 8271 1.516110 AGCCTACCATGCATTCCTCT 58.484 50.000 0.00 0.00 0.00 3.69
3120 8307 0.240678 TGCTGTTAACCTGCAATGCG 59.759 50.000 17.34 0.00 43.98 4.73
3156 8347 7.372451 TCTAATGGAACGGTGTAAAATTCAG 57.628 36.000 0.00 0.00 0.00 3.02
3292 8483 8.527810 TCATTCTGGAGCCGTAAATAAATTTTT 58.472 29.630 0.00 0.00 0.00 1.94
3293 8484 8.062065 TCATTCTGGAGCCGTAAATAAATTTT 57.938 30.769 0.00 0.00 0.00 1.82
3294 8485 7.639113 TCATTCTGGAGCCGTAAATAAATTT 57.361 32.000 0.00 0.00 0.00 1.82
3295 8486 7.639113 TTCATTCTGGAGCCGTAAATAAATT 57.361 32.000 0.00 0.00 0.00 1.82
3296 8487 7.823745 ATTCATTCTGGAGCCGTAAATAAAT 57.176 32.000 0.00 0.00 0.00 1.40
3305 8496 2.141517 CTGCTATTCATTCTGGAGCCG 58.858 52.381 0.00 0.00 31.98 5.52
3348 8539 3.545633 GCGACACAAATTCAGTTCTCAC 58.454 45.455 0.00 0.00 0.00 3.51
3355 8546 1.238439 ACCTGGCGACACAAATTCAG 58.762 50.000 0.00 0.00 35.60 3.02
3379 8570 2.220586 TCGGAACAGGATGGGTGCA 61.221 57.895 0.00 0.00 43.62 4.57
3513 8707 0.591170 CTCGCACCCGTCAACAATTT 59.409 50.000 0.00 0.00 35.54 1.82
3520 8715 1.822114 TTGGAATCTCGCACCCGTCA 61.822 55.000 0.00 0.00 35.54 4.35
3528 8723 1.098050 AGCCATGTTTGGAATCTCGC 58.902 50.000 0.00 0.00 46.92 5.03
3529 8724 2.489329 ACAAGCCATGTTTGGAATCTCG 59.511 45.455 10.75 0.00 46.92 4.04
3605 8802 8.592809 AGATTTCTTCCTTCAGCCTATGTATAG 58.407 37.037 0.00 0.00 0.00 1.31
3675 8880 1.206132 TCTGTATTGTACTGTGCGGGG 59.794 52.381 0.00 0.00 0.00 5.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.