Multiple sequence alignment - TraesCS5B01G531800
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5B01G531800 | chr5B | 100.000 | 3406 | 0 | 0 | 1 | 3406 | 689668633 | 689672038 | 0.000000e+00 | 6290.0 |
1 | TraesCS5B01G531800 | chr5B | 95.031 | 644 | 11 | 3 | 982 | 1608 | 689646048 | 689646687 | 0.000000e+00 | 992.0 |
2 | TraesCS5B01G531800 | chr5B | 88.309 | 556 | 51 | 6 | 2865 | 3406 | 480247310 | 480247865 | 0.000000e+00 | 654.0 |
3 | TraesCS5B01G531800 | chr5B | 86.397 | 544 | 55 | 10 | 2865 | 3406 | 57974178 | 57973652 | 8.200000e-161 | 577.0 |
4 | TraesCS5B01G531800 | chr5B | 87.657 | 397 | 25 | 12 | 568 | 942 | 689645649 | 689646043 | 1.120000e-119 | 440.0 |
5 | TraesCS5B01G531800 | chr5B | 84.177 | 316 | 31 | 4 | 990 | 1286 | 492131849 | 492132164 | 4.300000e-74 | 289.0 |
6 | TraesCS5B01G531800 | chr5B | 81.366 | 322 | 53 | 6 | 2164 | 2483 | 492134023 | 492134339 | 4.360000e-64 | 255.0 |
7 | TraesCS5B01G531800 | chr5B | 89.172 | 157 | 15 | 2 | 1979 | 2135 | 121673324 | 121673170 | 9.640000e-46 | 195.0 |
8 | TraesCS5B01G531800 | chr5B | 88.034 | 117 | 14 | 0 | 1706 | 1822 | 689647097 | 689647213 | 4.580000e-29 | 139.0 |
9 | TraesCS5B01G531800 | chr5B | 85.714 | 119 | 17 | 0 | 1706 | 1824 | 696166210 | 696166328 | 3.570000e-25 | 126.0 |
10 | TraesCS5B01G531800 | chr5B | 85.047 | 107 | 14 | 1 | 2766 | 2870 | 264886795 | 264886901 | 1.290000e-19 | 108.0 |
11 | TraesCS5B01G531800 | chr5D | 88.263 | 1295 | 95 | 28 | 348 | 1611 | 546565433 | 546566701 | 0.000000e+00 | 1496.0 |
12 | TraesCS5B01G531800 | chr5D | 84.950 | 299 | 30 | 4 | 1003 | 1286 | 410278062 | 410278360 | 4.300000e-74 | 289.0 |
13 | TraesCS5B01G531800 | chr5D | 79.188 | 394 | 62 | 14 | 2178 | 2563 | 410284824 | 410285205 | 4.360000e-64 | 255.0 |
14 | TraesCS5B01G531800 | chr5D | 82.938 | 211 | 21 | 8 | 1091 | 1286 | 554577214 | 554577004 | 3.490000e-40 | 176.0 |
15 | TraesCS5B01G531800 | chr5D | 89.744 | 117 | 12 | 0 | 1706 | 1822 | 546567140 | 546567256 | 2.120000e-32 | 150.0 |
16 | TraesCS5B01G531800 | chr5D | 85.714 | 119 | 17 | 0 | 1706 | 1824 | 554520344 | 554520226 | 3.570000e-25 | 126.0 |
17 | TraesCS5B01G531800 | chr4A | 91.709 | 784 | 33 | 13 | 1071 | 1835 | 622441714 | 622440944 | 0.000000e+00 | 1059.0 |
18 | TraesCS5B01G531800 | chr4A | 91.454 | 784 | 35 | 13 | 1071 | 1835 | 622559346 | 622558576 | 0.000000e+00 | 1048.0 |
19 | TraesCS5B01G531800 | chr4A | 91.338 | 785 | 34 | 15 | 1071 | 1835 | 622510781 | 622510011 | 0.000000e+00 | 1042.0 |
20 | TraesCS5B01G531800 | chr4A | 92.803 | 528 | 37 | 1 | 2865 | 3392 | 622438807 | 622438281 | 0.000000e+00 | 763.0 |
21 | TraesCS5B01G531800 | chr4A | 92.614 | 528 | 37 | 2 | 2865 | 3392 | 622473662 | 622473137 | 0.000000e+00 | 758.0 |
22 | TraesCS5B01G531800 | chr4A | 92.424 | 528 | 38 | 2 | 2865 | 3392 | 622507858 | 622507333 | 0.000000e+00 | 752.0 |
23 | TraesCS5B01G531800 | chr4A | 92.424 | 528 | 39 | 1 | 2865 | 3392 | 622556418 | 622555892 | 0.000000e+00 | 752.0 |
24 | TraesCS5B01G531800 | chr4A | 94.722 | 360 | 16 | 1 | 2217 | 2576 | 622475017 | 622474661 | 1.070000e-154 | 556.0 |
25 | TraesCS5B01G531800 | chr4A | 94.722 | 360 | 16 | 1 | 2217 | 2576 | 622557775 | 622557419 | 1.070000e-154 | 556.0 |
26 | TraesCS5B01G531800 | chr4A | 94.167 | 360 | 18 | 1 | 2217 | 2576 | 622509213 | 622508857 | 2.310000e-151 | 545.0 |
27 | TraesCS5B01G531800 | chr4A | 93.889 | 360 | 19 | 1 | 2221 | 2580 | 622440155 | 622439799 | 1.080000e-149 | 540.0 |
28 | TraesCS5B01G531800 | chr4A | 88.816 | 304 | 29 | 5 | 2570 | 2870 | 622439149 | 622438848 | 5.370000e-98 | 368.0 |
29 | TraesCS5B01G531800 | chr4A | 88.487 | 304 | 30 | 3 | 2570 | 2870 | 622508200 | 622507899 | 2.500000e-96 | 363.0 |
30 | TraesCS5B01G531800 | chr4A | 87.829 | 304 | 32 | 3 | 2570 | 2870 | 622474004 | 622473703 | 5.410000e-93 | 351.0 |
31 | TraesCS5B01G531800 | chr4A | 87.829 | 304 | 32 | 3 | 2570 | 2870 | 622556760 | 622556459 | 5.410000e-93 | 351.0 |
32 | TraesCS5B01G531800 | chr4A | 86.547 | 223 | 25 | 4 | 80 | 300 | 533320968 | 533320749 | 1.220000e-59 | 241.0 |
33 | TraesCS5B01G531800 | chr4A | 80.894 | 246 | 35 | 5 | 1366 | 1601 | 614004980 | 614005223 | 2.090000e-42 | 183.0 |
34 | TraesCS5B01G531800 | chr4A | 88.235 | 119 | 14 | 0 | 1706 | 1824 | 614015592 | 614015710 | 3.540000e-30 | 143.0 |
35 | TraesCS5B01G531800 | chr4A | 83.553 | 152 | 21 | 4 | 73 | 224 | 622510944 | 622510797 | 4.580000e-29 | 139.0 |
36 | TraesCS5B01G531800 | chr4A | 91.463 | 82 | 7 | 0 | 1849 | 1930 | 622509467 | 622509386 | 2.780000e-21 | 113.0 |
37 | TraesCS5B01G531800 | chr4A | 91.463 | 82 | 7 | 0 | 1849 | 1930 | 622558029 | 622557948 | 2.780000e-21 | 113.0 |
38 | TraesCS5B01G531800 | chr4A | 90.244 | 82 | 8 | 0 | 1849 | 1930 | 622440400 | 622440319 | 1.290000e-19 | 108.0 |
39 | TraesCS5B01G531800 | chr4A | 93.617 | 47 | 3 | 0 | 1942 | 1988 | 622440334 | 622440288 | 1.700000e-08 | 71.3 |
40 | TraesCS5B01G531800 | chr4A | 93.617 | 47 | 3 | 0 | 1942 | 1988 | 622475205 | 622475159 | 1.700000e-08 | 71.3 |
41 | TraesCS5B01G531800 | chr4A | 93.617 | 47 | 3 | 0 | 1942 | 1988 | 622509401 | 622509355 | 1.700000e-08 | 71.3 |
42 | TraesCS5B01G531800 | chr4A | 93.617 | 47 | 3 | 0 | 1942 | 1988 | 622557963 | 622557917 | 1.700000e-08 | 71.3 |
43 | TraesCS5B01G531800 | chr4B | 87.950 | 556 | 50 | 8 | 2865 | 3406 | 667982996 | 667983548 | 1.030000e-179 | 640.0 |
44 | TraesCS5B01G531800 | chr4B | 87.850 | 214 | 24 | 2 | 89 | 301 | 71704416 | 71704628 | 2.030000e-62 | 250.0 |
45 | TraesCS5B01G531800 | chr4B | 94.656 | 131 | 7 | 0 | 1986 | 2116 | 275999190 | 275999060 | 1.600000e-48 | 204.0 |
46 | TraesCS5B01G531800 | chr4D | 88.087 | 554 | 33 | 7 | 2865 | 3406 | 372978877 | 372979409 | 8.020000e-176 | 627.0 |
47 | TraesCS5B01G531800 | chr4D | 88.493 | 365 | 29 | 5 | 3055 | 3406 | 456677061 | 456677425 | 2.430000e-116 | 429.0 |
48 | TraesCS5B01G531800 | chr4D | 84.255 | 235 | 28 | 1 | 1372 | 1597 | 477088938 | 477088704 | 1.590000e-53 | 220.0 |
49 | TraesCS5B01G531800 | chr4D | 92.562 | 121 | 9 | 0 | 1706 | 1826 | 477088330 | 477088210 | 1.260000e-39 | 174.0 |
50 | TraesCS5B01G531800 | chr4D | 82.407 | 216 | 23 | 6 | 1091 | 1291 | 477089281 | 477089066 | 1.260000e-39 | 174.0 |
51 | TraesCS5B01G531800 | chr7D | 87.906 | 554 | 35 | 7 | 2865 | 3406 | 618278803 | 618279336 | 1.040000e-174 | 623.0 |
52 | TraesCS5B01G531800 | chr7D | 87.097 | 279 | 29 | 6 | 2876 | 3149 | 486557020 | 486556744 | 3.300000e-80 | 309.0 |
53 | TraesCS5B01G531800 | chr7D | 87.264 | 212 | 26 | 1 | 89 | 300 | 552186593 | 552186383 | 1.220000e-59 | 241.0 |
54 | TraesCS5B01G531800 | chr7D | 93.284 | 134 | 9 | 0 | 1984 | 2117 | 490590930 | 490590797 | 7.460000e-47 | 198.0 |
55 | TraesCS5B01G531800 | chr7D | 92.647 | 136 | 9 | 1 | 1982 | 2116 | 12423927 | 12423792 | 9.640000e-46 | 195.0 |
56 | TraesCS5B01G531800 | chr2D | 87.410 | 556 | 35 | 8 | 2865 | 3406 | 59163162 | 59162628 | 1.050000e-169 | 606.0 |
57 | TraesCS5B01G531800 | chr2D | 87.365 | 554 | 37 | 11 | 2865 | 3406 | 650382188 | 650381656 | 3.760000e-169 | 604.0 |
58 | TraesCS5B01G531800 | chr2D | 87.215 | 219 | 26 | 2 | 83 | 300 | 8146513 | 8146296 | 7.300000e-62 | 248.0 |
59 | TraesCS5B01G531800 | chr2D | 93.284 | 134 | 9 | 0 | 1984 | 2117 | 536091024 | 536091157 | 7.460000e-47 | 198.0 |
60 | TraesCS5B01G531800 | chr2D | 81.277 | 235 | 35 | 1 | 1372 | 1597 | 593227033 | 593227267 | 7.510000e-42 | 182.0 |
61 | TraesCS5B01G531800 | chr5A | 87.324 | 213 | 27 | 0 | 88 | 300 | 475652413 | 475652625 | 9.440000e-61 | 244.0 |
62 | TraesCS5B01G531800 | chr3B | 87.383 | 214 | 26 | 1 | 88 | 300 | 538815844 | 538816057 | 9.440000e-61 | 244.0 |
63 | TraesCS5B01G531800 | chr3B | 91.549 | 142 | 10 | 2 | 1980 | 2120 | 507292659 | 507292519 | 9.640000e-46 | 195.0 |
64 | TraesCS5B01G531800 | chr3B | 82.550 | 149 | 17 | 8 | 1986 | 2131 | 422472172 | 422472314 | 4.620000e-24 | 122.0 |
65 | TraesCS5B01G531800 | chr3B | 89.583 | 96 | 9 | 1 | 3055 | 3149 | 63028639 | 63028734 | 1.660000e-23 | 121.0 |
66 | TraesCS5B01G531800 | chr7B | 87.324 | 213 | 26 | 1 | 89 | 300 | 173229521 | 173229733 | 3.400000e-60 | 243.0 |
67 | TraesCS5B01G531800 | chr7B | 89.404 | 151 | 13 | 3 | 1986 | 2135 | 656518108 | 656518256 | 1.610000e-43 | 187.0 |
68 | TraesCS5B01G531800 | chr2B | 87.097 | 217 | 25 | 3 | 87 | 300 | 507435983 | 507435767 | 3.400000e-60 | 243.0 |
69 | TraesCS5B01G531800 | chr2B | 86.364 | 220 | 25 | 5 | 87 | 301 | 134369580 | 134369361 | 5.680000e-58 | 235.0 |
70 | TraesCS5B01G531800 | chr2B | 95.312 | 128 | 6 | 0 | 1986 | 2113 | 518742260 | 518742387 | 1.600000e-48 | 204.0 |
71 | TraesCS5B01G531800 | chr2B | 81.197 | 234 | 35 | 1 | 1372 | 1596 | 719499418 | 719499651 | 2.700000e-41 | 180.0 |
72 | TraesCS5B01G531800 | chr3D | 91.096 | 146 | 11 | 2 | 1977 | 2120 | 496172894 | 496172749 | 2.680000e-46 | 196.0 |
73 | TraesCS5B01G531800 | chrUn | 88.298 | 94 | 11 | 0 | 2772 | 2865 | 21622254 | 21622347 | 2.780000e-21 | 113.0 |
74 | TraesCS5B01G531800 | chr7A | 85.714 | 70 | 8 | 2 | 2060 | 2128 | 531183330 | 531183262 | 4.710000e-09 | 73.1 |
75 | TraesCS5B01G531800 | chr2A | 88.889 | 45 | 5 | 0 | 2084 | 2128 | 398656577 | 398656533 | 4.750000e-04 | 56.5 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5B01G531800 | chr5B | 689668633 | 689672038 | 3405 | False | 6290.000000 | 6290 | 100.000000 | 1 | 3406 | 1 | chr5B.!!$F3 | 3405 |
1 | TraesCS5B01G531800 | chr5B | 480247310 | 480247865 | 555 | False | 654.000000 | 654 | 88.309000 | 2865 | 3406 | 1 | chr5B.!!$F2 | 541 |
2 | TraesCS5B01G531800 | chr5B | 57973652 | 57974178 | 526 | True | 577.000000 | 577 | 86.397000 | 2865 | 3406 | 1 | chr5B.!!$R1 | 541 |
3 | TraesCS5B01G531800 | chr5B | 689645649 | 689647213 | 1564 | False | 523.666667 | 992 | 90.240667 | 568 | 1822 | 3 | chr5B.!!$F6 | 1254 |
4 | TraesCS5B01G531800 | chr5B | 492131849 | 492134339 | 2490 | False | 272.000000 | 289 | 82.771500 | 990 | 2483 | 2 | chr5B.!!$F5 | 1493 |
5 | TraesCS5B01G531800 | chr5D | 546565433 | 546567256 | 1823 | False | 823.000000 | 1496 | 89.003500 | 348 | 1822 | 2 | chr5D.!!$F3 | 1474 |
6 | TraesCS5B01G531800 | chr4A | 622438281 | 622441714 | 3433 | True | 484.883333 | 1059 | 91.846333 | 1071 | 3392 | 6 | chr4A.!!$R2 | 2321 |
7 | TraesCS5B01G531800 | chr4A | 622555892 | 622559346 | 3454 | True | 481.883333 | 1048 | 91.918167 | 1071 | 3392 | 6 | chr4A.!!$R5 | 2321 |
8 | TraesCS5B01G531800 | chr4A | 622473137 | 622475205 | 2068 | True | 434.075000 | 758 | 92.195500 | 1942 | 3392 | 4 | chr4A.!!$R3 | 1450 |
9 | TraesCS5B01G531800 | chr4A | 622507333 | 622510944 | 3611 | True | 432.185714 | 1042 | 90.721286 | 73 | 3392 | 7 | chr4A.!!$R4 | 3319 |
10 | TraesCS5B01G531800 | chr4B | 667982996 | 667983548 | 552 | False | 640.000000 | 640 | 87.950000 | 2865 | 3406 | 1 | chr4B.!!$F2 | 541 |
11 | TraesCS5B01G531800 | chr4D | 372978877 | 372979409 | 532 | False | 627.000000 | 627 | 88.087000 | 2865 | 3406 | 1 | chr4D.!!$F1 | 541 |
12 | TraesCS5B01G531800 | chr7D | 618278803 | 618279336 | 533 | False | 623.000000 | 623 | 87.906000 | 2865 | 3406 | 1 | chr7D.!!$F1 | 541 |
13 | TraesCS5B01G531800 | chr2D | 59162628 | 59163162 | 534 | True | 606.000000 | 606 | 87.410000 | 2865 | 3406 | 1 | chr2D.!!$R2 | 541 |
14 | TraesCS5B01G531800 | chr2D | 650381656 | 650382188 | 532 | True | 604.000000 | 604 | 87.365000 | 2865 | 3406 | 1 | chr2D.!!$R3 | 541 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
886 | 918 | 0.247145 | GCCGTTCAACGTTATCAGCG | 60.247 | 55.0 | 9.52 | 1.88 | 40.58 | 5.18 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2804 | 5908 | 0.027586 | GAACATATCGTTGGCACCGC | 59.972 | 55.0 | 0.0 | 0.0 | 38.19 | 5.68 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
24 | 25 | 7.654022 | AAACCATTAAGAAACACCTTCTCAA | 57.346 | 32.000 | 0.00 | 0.00 | 44.00 | 3.02 |
25 | 26 | 7.654022 | AACCATTAAGAAACACCTTCTCAAA | 57.346 | 32.000 | 0.00 | 0.00 | 44.00 | 2.69 |
26 | 27 | 7.654022 | ACCATTAAGAAACACCTTCTCAAAA | 57.346 | 32.000 | 0.00 | 0.00 | 44.00 | 2.44 |
27 | 28 | 8.073467 | ACCATTAAGAAACACCTTCTCAAAAA | 57.927 | 30.769 | 0.00 | 0.00 | 44.00 | 1.94 |
28 | 29 | 8.704668 | ACCATTAAGAAACACCTTCTCAAAAAT | 58.295 | 29.630 | 0.00 | 0.00 | 44.00 | 1.82 |
29 | 30 | 9.546428 | CCATTAAGAAACACCTTCTCAAAAATT | 57.454 | 29.630 | 0.00 | 0.00 | 44.00 | 1.82 |
34 | 35 | 9.500785 | AAGAAACACCTTCTCAAAAATTGAAAA | 57.499 | 25.926 | 0.00 | 0.00 | 44.00 | 2.29 |
35 | 36 | 9.671279 | AGAAACACCTTCTCAAAAATTGAAAAT | 57.329 | 25.926 | 0.00 | 0.00 | 40.61 | 1.82 |
36 | 37 | 9.706846 | GAAACACCTTCTCAAAAATTGAAAATG | 57.293 | 29.630 | 0.00 | 0.00 | 39.58 | 2.32 |
37 | 38 | 9.447157 | AAACACCTTCTCAAAAATTGAAAATGA | 57.553 | 25.926 | 0.00 | 0.00 | 39.58 | 2.57 |
38 | 39 | 8.424274 | ACACCTTCTCAAAAATTGAAAATGAC | 57.576 | 30.769 | 0.00 | 0.00 | 39.58 | 3.06 |
39 | 40 | 8.040132 | ACACCTTCTCAAAAATTGAAAATGACA | 58.960 | 29.630 | 0.00 | 0.00 | 39.58 | 3.58 |
40 | 41 | 9.048446 | CACCTTCTCAAAAATTGAAAATGACAT | 57.952 | 29.630 | 0.00 | 0.00 | 39.58 | 3.06 |
41 | 42 | 9.617523 | ACCTTCTCAAAAATTGAAAATGACATT | 57.382 | 25.926 | 0.00 | 0.00 | 39.58 | 2.71 |
63 | 64 | 5.964958 | TTCAATCCTTGAAGGTGCTAAAG | 57.035 | 39.130 | 11.60 | 0.00 | 44.21 | 1.85 |
64 | 65 | 4.985538 | TCAATCCTTGAAGGTGCTAAAGT | 58.014 | 39.130 | 11.60 | 0.00 | 36.59 | 2.66 |
65 | 66 | 6.121776 | TCAATCCTTGAAGGTGCTAAAGTA | 57.878 | 37.500 | 11.60 | 0.00 | 36.59 | 2.24 |
66 | 67 | 6.721318 | TCAATCCTTGAAGGTGCTAAAGTAT | 58.279 | 36.000 | 11.60 | 0.00 | 36.59 | 2.12 |
67 | 68 | 7.175104 | TCAATCCTTGAAGGTGCTAAAGTATT | 58.825 | 34.615 | 11.60 | 0.00 | 36.59 | 1.89 |
68 | 69 | 7.336931 | TCAATCCTTGAAGGTGCTAAAGTATTC | 59.663 | 37.037 | 11.60 | 0.00 | 36.59 | 1.75 |
69 | 70 | 6.374417 | TCCTTGAAGGTGCTAAAGTATTCT | 57.626 | 37.500 | 11.60 | 0.00 | 36.53 | 2.40 |
70 | 71 | 6.779860 | TCCTTGAAGGTGCTAAAGTATTCTT | 58.220 | 36.000 | 11.60 | 0.00 | 36.53 | 2.52 |
71 | 72 | 6.879458 | TCCTTGAAGGTGCTAAAGTATTCTTC | 59.121 | 38.462 | 11.60 | 0.00 | 36.53 | 2.87 |
98 | 99 | 4.678538 | AAACTAGTCAGTACTCCCTCCT | 57.321 | 45.455 | 0.00 | 0.00 | 37.15 | 3.69 |
106 | 107 | 4.020128 | GTCAGTACTCCCTCCTGTCATTTT | 60.020 | 45.833 | 0.00 | 0.00 | 0.00 | 1.82 |
112 | 113 | 5.953571 | ACTCCCTCCTGTCATTTTTACTTT | 58.046 | 37.500 | 0.00 | 0.00 | 0.00 | 2.66 |
114 | 115 | 5.701224 | TCCCTCCTGTCATTTTTACTTTGT | 58.299 | 37.500 | 0.00 | 0.00 | 0.00 | 2.83 |
115 | 116 | 5.534654 | TCCCTCCTGTCATTTTTACTTTGTG | 59.465 | 40.000 | 0.00 | 0.00 | 0.00 | 3.33 |
161 | 162 | 6.180771 | ACTTTGCAAAGTTTGACCAAATTG | 57.819 | 33.333 | 33.85 | 10.80 | 46.52 | 2.32 |
327 | 328 | 9.899226 | CAGATAAACTTTAAAAGAACAGAAGGG | 57.101 | 33.333 | 0.00 | 0.00 | 0.00 | 3.95 |
328 | 329 | 9.862149 | AGATAAACTTTAAAAGAACAGAAGGGA | 57.138 | 29.630 | 0.00 | 0.00 | 0.00 | 4.20 |
330 | 331 | 7.956328 | AAACTTTAAAAGAACAGAAGGGAGT | 57.044 | 32.000 | 0.00 | 0.00 | 0.00 | 3.85 |
332 | 333 | 8.447924 | AACTTTAAAAGAACAGAAGGGAGTAC | 57.552 | 34.615 | 0.00 | 0.00 | 0.00 | 2.73 |
333 | 334 | 7.571025 | ACTTTAAAAGAACAGAAGGGAGTACA | 58.429 | 34.615 | 0.00 | 0.00 | 0.00 | 2.90 |
334 | 335 | 8.218488 | ACTTTAAAAGAACAGAAGGGAGTACAT | 58.782 | 33.333 | 0.00 | 0.00 | 0.00 | 2.29 |
335 | 336 | 8.990163 | TTTAAAAGAACAGAAGGGAGTACATT | 57.010 | 30.769 | 0.00 | 0.00 | 0.00 | 2.71 |
336 | 337 | 6.884280 | AAAAGAACAGAAGGGAGTACATTG | 57.116 | 37.500 | 0.00 | 0.00 | 0.00 | 2.82 |
337 | 338 | 5.825593 | AAGAACAGAAGGGAGTACATTGA | 57.174 | 39.130 | 0.00 | 0.00 | 0.00 | 2.57 |
338 | 339 | 6.380079 | AAGAACAGAAGGGAGTACATTGAT | 57.620 | 37.500 | 0.00 | 0.00 | 0.00 | 2.57 |
339 | 340 | 5.983540 | AGAACAGAAGGGAGTACATTGATC | 58.016 | 41.667 | 0.00 | 0.00 | 0.00 | 2.92 |
340 | 341 | 5.723887 | AGAACAGAAGGGAGTACATTGATCT | 59.276 | 40.000 | 0.00 | 0.00 | 0.00 | 2.75 |
341 | 342 | 6.214412 | AGAACAGAAGGGAGTACATTGATCTT | 59.786 | 38.462 | 0.00 | 0.00 | 0.00 | 2.40 |
342 | 343 | 7.400339 | AGAACAGAAGGGAGTACATTGATCTTA | 59.600 | 37.037 | 0.00 | 0.00 | 0.00 | 2.10 |
343 | 344 | 7.118496 | ACAGAAGGGAGTACATTGATCTTAG | 57.882 | 40.000 | 0.00 | 0.00 | 0.00 | 2.18 |
344 | 345 | 5.988561 | CAGAAGGGAGTACATTGATCTTAGC | 59.011 | 44.000 | 0.00 | 0.00 | 0.00 | 3.09 |
345 | 346 | 5.902431 | AGAAGGGAGTACATTGATCTTAGCT | 59.098 | 40.000 | 0.00 | 0.00 | 0.00 | 3.32 |
346 | 347 | 5.543507 | AGGGAGTACATTGATCTTAGCTG | 57.456 | 43.478 | 0.00 | 0.00 | 0.00 | 4.24 |
386 | 387 | 6.573485 | GCTTATAGCTAGCTTAGGGAAAGAGG | 60.573 | 46.154 | 24.88 | 1.46 | 38.45 | 3.69 |
388 | 389 | 1.202710 | GCTAGCTTAGGGAAAGAGGGC | 60.203 | 57.143 | 7.70 | 0.00 | 37.38 | 5.19 |
399 | 400 | 0.543749 | AAAGAGGGCATTCGAGGGAG | 59.456 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
442 | 450 | 2.158900 | AGACGAATGTGCCTAGGATTGG | 60.159 | 50.000 | 14.75 | 7.52 | 0.00 | 3.16 |
464 | 472 | 2.868583 | CCACGATGAACTGATAAGGCTG | 59.131 | 50.000 | 0.00 | 0.00 | 0.00 | 4.85 |
468 | 476 | 3.489229 | CGATGAACTGATAAGGCTGACGA | 60.489 | 47.826 | 0.00 | 0.00 | 0.00 | 4.20 |
481 | 489 | 2.048127 | GACGAAGGCGGCTCAACT | 60.048 | 61.111 | 13.70 | 0.00 | 43.91 | 3.16 |
497 | 512 | 3.857854 | CTCGAGCGGCATGTGCAC | 61.858 | 66.667 | 10.75 | 10.75 | 44.36 | 4.57 |
503 | 518 | 3.434319 | CGGCATGTGCACCTGGTC | 61.434 | 66.667 | 21.50 | 8.85 | 44.36 | 4.02 |
641 | 657 | 2.646175 | GGCAGGTAGACCAGACGCA | 61.646 | 63.158 | 0.66 | 0.00 | 38.89 | 5.24 |
751 | 767 | 2.432972 | GCCACGCAAAAGGGCATG | 60.433 | 61.111 | 0.00 | 0.00 | 46.92 | 4.06 |
752 | 768 | 2.432972 | CCACGCAAAAGGGCATGC | 60.433 | 61.111 | 9.90 | 9.90 | 39.17 | 4.06 |
788 | 819 | 2.048127 | GTGGCACGACCTCTGACC | 60.048 | 66.667 | 0.00 | 0.00 | 40.22 | 4.02 |
798 | 829 | 5.178797 | CACGACCTCTGACCAAGATATTTT | 58.821 | 41.667 | 0.00 | 0.00 | 33.29 | 1.82 |
799 | 830 | 5.643777 | CACGACCTCTGACCAAGATATTTTT | 59.356 | 40.000 | 0.00 | 0.00 | 33.29 | 1.94 |
805 | 836 | 3.947834 | CTGACCAAGATATTTTTCCCGCT | 59.052 | 43.478 | 0.00 | 0.00 | 0.00 | 5.52 |
806 | 837 | 4.340617 | TGACCAAGATATTTTTCCCGCTT | 58.659 | 39.130 | 0.00 | 0.00 | 0.00 | 4.68 |
807 | 838 | 5.502079 | TGACCAAGATATTTTTCCCGCTTA | 58.498 | 37.500 | 0.00 | 0.00 | 0.00 | 3.09 |
833 | 864 | 4.586618 | CTCAGGAAGCCACGTGAG | 57.413 | 61.111 | 19.30 | 8.47 | 43.04 | 3.51 |
886 | 918 | 0.247145 | GCCGTTCAACGTTATCAGCG | 60.247 | 55.000 | 9.52 | 1.88 | 40.58 | 5.18 |
960 | 997 | 5.888161 | AGTGCCAAAATGGTCTTAGGATTAG | 59.112 | 40.000 | 0.00 | 0.00 | 40.46 | 1.73 |
964 | 1001 | 6.039829 | GCCAAAATGGTCTTAGGATTAGGAAG | 59.960 | 42.308 | 0.00 | 0.00 | 40.46 | 3.46 |
970 | 1007 | 7.446106 | TGGTCTTAGGATTAGGAAGCAAATA | 57.554 | 36.000 | 0.00 | 0.00 | 0.00 | 1.40 |
1307 | 2189 | 7.903145 | AGTTATATGTGTCTGTAAACTGTGGA | 58.097 | 34.615 | 0.00 | 0.00 | 0.00 | 4.02 |
1308 | 2190 | 8.540388 | AGTTATATGTGTCTGTAAACTGTGGAT | 58.460 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
1309 | 2191 | 8.818057 | GTTATATGTGTCTGTAAACTGTGGATC | 58.182 | 37.037 | 0.00 | 0.00 | 0.00 | 3.36 |
1310 | 2192 | 3.649073 | TGTGTCTGTAAACTGTGGATCG | 58.351 | 45.455 | 0.00 | 0.00 | 0.00 | 3.69 |
1611 | 2881 | 2.370281 | AGTACGTGCTCACTCCATTG | 57.630 | 50.000 | 0.00 | 0.00 | 0.00 | 2.82 |
1615 | 3031 | 0.320683 | CGTGCTCACTCCATTGTCCA | 60.321 | 55.000 | 0.00 | 0.00 | 0.00 | 4.02 |
1617 | 3033 | 2.440409 | GTGCTCACTCCATTGTCCATT | 58.560 | 47.619 | 0.00 | 0.00 | 0.00 | 3.16 |
1632 | 3048 | 8.689061 | CCATTGTCCATTTCAAGATAAATCTCA | 58.311 | 33.333 | 0.00 | 0.00 | 35.76 | 3.27 |
1685 | 3196 | 8.721478 | TGTGAAACTATATCAGCTTCAAGTTTC | 58.279 | 33.333 | 19.88 | 19.88 | 46.56 | 2.78 |
1731 | 3565 | 2.084546 | GGTGCTATGAACCAACTGACC | 58.915 | 52.381 | 0.00 | 0.00 | 37.65 | 4.02 |
1826 | 3660 | 9.507329 | AACCGATATGATTAAAGATGTAAGCAT | 57.493 | 29.630 | 0.00 | 0.00 | 41.61 | 3.79 |
1838 | 3672 | 8.709386 | AAAGATGTAAGCATAGAGTACTTGTG | 57.291 | 34.615 | 0.00 | 0.00 | 35.07 | 3.33 |
1846 | 3680 | 7.713734 | AGCATAGAGTACTTGTGTAACCTAA | 57.286 | 36.000 | 0.00 | 0.00 | 34.36 | 2.69 |
1923 | 4293 | 3.923017 | CCAGGCTTGGTAAGTTTTCAG | 57.077 | 47.619 | 6.72 | 0.00 | 39.79 | 3.02 |
1924 | 4294 | 3.222603 | CCAGGCTTGGTAAGTTTTCAGT | 58.777 | 45.455 | 6.72 | 0.00 | 39.79 | 3.41 |
1925 | 4295 | 3.004734 | CCAGGCTTGGTAAGTTTTCAGTG | 59.995 | 47.826 | 6.72 | 0.00 | 39.79 | 3.66 |
1926 | 4296 | 3.882888 | CAGGCTTGGTAAGTTTTCAGTGA | 59.117 | 43.478 | 0.00 | 0.00 | 0.00 | 3.41 |
1927 | 4297 | 4.023707 | CAGGCTTGGTAAGTTTTCAGTGAG | 60.024 | 45.833 | 0.00 | 0.00 | 0.00 | 3.51 |
1928 | 4298 | 4.134563 | GGCTTGGTAAGTTTTCAGTGAGA | 58.865 | 43.478 | 0.00 | 0.00 | 0.00 | 3.27 |
1929 | 4299 | 4.762251 | GGCTTGGTAAGTTTTCAGTGAGAT | 59.238 | 41.667 | 0.00 | 0.00 | 0.00 | 2.75 |
1930 | 4300 | 5.335191 | GGCTTGGTAAGTTTTCAGTGAGATG | 60.335 | 44.000 | 0.00 | 0.00 | 0.00 | 2.90 |
1931 | 4301 | 5.239525 | GCTTGGTAAGTTTTCAGTGAGATGT | 59.760 | 40.000 | 0.00 | 0.00 | 0.00 | 3.06 |
1932 | 4302 | 6.238759 | GCTTGGTAAGTTTTCAGTGAGATGTT | 60.239 | 38.462 | 0.00 | 0.00 | 0.00 | 2.71 |
1933 | 4303 | 7.041372 | GCTTGGTAAGTTTTCAGTGAGATGTTA | 60.041 | 37.037 | 0.00 | 0.00 | 0.00 | 2.41 |
1934 | 4304 | 8.918202 | TTGGTAAGTTTTCAGTGAGATGTTAT | 57.082 | 30.769 | 0.00 | 0.00 | 0.00 | 1.89 |
1935 | 4305 | 8.547967 | TGGTAAGTTTTCAGTGAGATGTTATC | 57.452 | 34.615 | 0.00 | 0.00 | 0.00 | 1.75 |
1936 | 4306 | 8.154203 | TGGTAAGTTTTCAGTGAGATGTTATCA | 58.846 | 33.333 | 0.00 | 0.00 | 0.00 | 2.15 |
1937 | 4307 | 8.660373 | GGTAAGTTTTCAGTGAGATGTTATCAG | 58.340 | 37.037 | 0.00 | 0.00 | 0.00 | 2.90 |
1938 | 4308 | 9.424319 | GTAAGTTTTCAGTGAGATGTTATCAGA | 57.576 | 33.333 | 0.00 | 0.00 | 0.00 | 3.27 |
1939 | 4309 | 8.908786 | AAGTTTTCAGTGAGATGTTATCAGAA | 57.091 | 30.769 | 0.00 | 0.00 | 0.00 | 3.02 |
1940 | 4310 | 8.908786 | AGTTTTCAGTGAGATGTTATCAGAAA | 57.091 | 30.769 | 0.00 | 0.00 | 0.00 | 2.52 |
1992 | 4362 | 9.293404 | ACTTTATCCTAAAAACAAAGTACTCCC | 57.707 | 33.333 | 0.00 | 0.00 | 37.60 | 4.30 |
1993 | 4363 | 9.516546 | CTTTATCCTAAAAACAAAGTACTCCCT | 57.483 | 33.333 | 0.00 | 0.00 | 0.00 | 4.20 |
1994 | 4364 | 9.511272 | TTTATCCTAAAAACAAAGTACTCCCTC | 57.489 | 33.333 | 0.00 | 0.00 | 0.00 | 4.30 |
1995 | 4365 | 5.872963 | TCCTAAAAACAAAGTACTCCCTCC | 58.127 | 41.667 | 0.00 | 0.00 | 0.00 | 4.30 |
1996 | 4366 | 4.694037 | CCTAAAAACAAAGTACTCCCTCCG | 59.306 | 45.833 | 0.00 | 0.00 | 0.00 | 4.63 |
1997 | 4367 | 3.851458 | AAAACAAAGTACTCCCTCCGT | 57.149 | 42.857 | 0.00 | 0.00 | 0.00 | 4.69 |
1998 | 4368 | 3.397849 | AAACAAAGTACTCCCTCCGTC | 57.602 | 47.619 | 0.00 | 0.00 | 0.00 | 4.79 |
1999 | 4369 | 2.305858 | ACAAAGTACTCCCTCCGTCT | 57.694 | 50.000 | 0.00 | 0.00 | 0.00 | 4.18 |
2000 | 4370 | 2.606378 | ACAAAGTACTCCCTCCGTCTT | 58.394 | 47.619 | 0.00 | 0.00 | 0.00 | 3.01 |
2001 | 4371 | 3.771216 | ACAAAGTACTCCCTCCGTCTTA | 58.229 | 45.455 | 0.00 | 0.00 | 0.00 | 2.10 |
2002 | 4372 | 4.154942 | ACAAAGTACTCCCTCCGTCTTAA | 58.845 | 43.478 | 0.00 | 0.00 | 0.00 | 1.85 |
2003 | 4373 | 4.590222 | ACAAAGTACTCCCTCCGTCTTAAA | 59.410 | 41.667 | 0.00 | 0.00 | 0.00 | 1.52 |
2004 | 4374 | 5.070847 | ACAAAGTACTCCCTCCGTCTTAAAA | 59.929 | 40.000 | 0.00 | 0.00 | 0.00 | 1.52 |
2005 | 4375 | 6.171213 | CAAAGTACTCCCTCCGTCTTAAAAT | 58.829 | 40.000 | 0.00 | 0.00 | 0.00 | 1.82 |
2006 | 4376 | 6.370186 | AAGTACTCCCTCCGTCTTAAAATT | 57.630 | 37.500 | 0.00 | 0.00 | 0.00 | 1.82 |
2007 | 4377 | 6.370186 | AGTACTCCCTCCGTCTTAAAATTT | 57.630 | 37.500 | 0.00 | 0.00 | 0.00 | 1.82 |
2008 | 4378 | 6.776744 | AGTACTCCCTCCGTCTTAAAATTTT | 58.223 | 36.000 | 8.75 | 8.75 | 0.00 | 1.82 |
2009 | 4379 | 7.229308 | AGTACTCCCTCCGTCTTAAAATTTTT | 58.771 | 34.615 | 9.06 | 0.00 | 0.00 | 1.94 |
2010 | 4380 | 6.327279 | ACTCCCTCCGTCTTAAAATTTTTG | 57.673 | 37.500 | 9.06 | 3.23 | 0.00 | 2.44 |
2011 | 4381 | 5.831525 | ACTCCCTCCGTCTTAAAATTTTTGT | 59.168 | 36.000 | 9.06 | 0.00 | 0.00 | 2.83 |
2012 | 4382 | 6.016527 | ACTCCCTCCGTCTTAAAATTTTTGTC | 60.017 | 38.462 | 9.06 | 0.62 | 0.00 | 3.18 |
2013 | 4383 | 6.066032 | TCCCTCCGTCTTAAAATTTTTGTCT | 58.934 | 36.000 | 9.06 | 0.00 | 0.00 | 3.41 |
2014 | 4384 | 6.548251 | TCCCTCCGTCTTAAAATTTTTGTCTT | 59.452 | 34.615 | 9.06 | 0.00 | 0.00 | 3.01 |
2015 | 4385 | 7.720515 | TCCCTCCGTCTTAAAATTTTTGTCTTA | 59.279 | 33.333 | 9.06 | 0.00 | 0.00 | 2.10 |
2016 | 4386 | 7.806487 | CCCTCCGTCTTAAAATTTTTGTCTTAC | 59.194 | 37.037 | 9.06 | 0.00 | 0.00 | 2.34 |
2017 | 4387 | 8.347035 | CCTCCGTCTTAAAATTTTTGTCTTACA | 58.653 | 33.333 | 9.06 | 0.00 | 0.00 | 2.41 |
2018 | 4388 | 9.893305 | CTCCGTCTTAAAATTTTTGTCTTACAT | 57.107 | 29.630 | 9.06 | 0.00 | 0.00 | 2.29 |
2051 | 4421 | 9.857656 | AAATATGGATGTATCAAGTCATGTCTT | 57.142 | 29.630 | 0.00 | 0.00 | 0.00 | 3.01 |
2054 | 4424 | 7.423844 | TGGATGTATCAAGTCATGTCTTAGT | 57.576 | 36.000 | 4.85 | 0.52 | 0.00 | 2.24 |
2055 | 4425 | 8.533569 | TGGATGTATCAAGTCATGTCTTAGTA | 57.466 | 34.615 | 4.85 | 0.00 | 0.00 | 1.82 |
2056 | 4426 | 9.147732 | TGGATGTATCAAGTCATGTCTTAGTAT | 57.852 | 33.333 | 4.85 | 3.09 | 0.00 | 2.12 |
2057 | 4427 | 9.988815 | GGATGTATCAAGTCATGTCTTAGTATT | 57.011 | 33.333 | 4.85 | 0.00 | 0.00 | 1.89 |
2068 | 4438 | 9.776158 | GTCATGTCTTAGTATTAGATACATCCG | 57.224 | 37.037 | 0.00 | 0.00 | 38.21 | 4.18 |
2069 | 4439 | 9.516546 | TCATGTCTTAGTATTAGATACATCCGT | 57.483 | 33.333 | 0.00 | 0.00 | 38.21 | 4.69 |
2088 | 4458 | 9.095065 | ACATCCGTATGTAGACAAATTTAAGAC | 57.905 | 33.333 | 0.00 | 0.00 | 44.66 | 3.01 |
2089 | 4459 | 9.093970 | CATCCGTATGTAGACAAATTTAAGACA | 57.906 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
2090 | 4460 | 9.661563 | ATCCGTATGTAGACAAATTTAAGACAA | 57.338 | 29.630 | 0.00 | 0.00 | 0.00 | 3.18 |
2091 | 4461 | 9.146984 | TCCGTATGTAGACAAATTTAAGACAAG | 57.853 | 33.333 | 0.00 | 0.00 | 0.00 | 3.16 |
2092 | 4462 | 9.146984 | CCGTATGTAGACAAATTTAAGACAAGA | 57.853 | 33.333 | 0.00 | 0.00 | 0.00 | 3.02 |
2100 | 4470 | 9.546428 | AGACAAATTTAAGACAAGAATTTTGGG | 57.454 | 29.630 | 0.00 | 0.00 | 33.39 | 4.12 |
2101 | 4471 | 9.541143 | GACAAATTTAAGACAAGAATTTTGGGA | 57.459 | 29.630 | 0.00 | 0.00 | 33.39 | 4.37 |
2102 | 4472 | 9.325198 | ACAAATTTAAGACAAGAATTTTGGGAC | 57.675 | 29.630 | 0.00 | 0.00 | 33.39 | 4.46 |
2103 | 4473 | 8.487176 | CAAATTTAAGACAAGAATTTTGGGACG | 58.513 | 33.333 | 0.00 | 0.00 | 32.35 | 4.79 |
2104 | 4474 | 5.699097 | TTAAGACAAGAATTTTGGGACGG | 57.301 | 39.130 | 0.00 | 0.00 | 0.00 | 4.79 |
2105 | 4475 | 3.502123 | AGACAAGAATTTTGGGACGGA | 57.498 | 42.857 | 0.00 | 0.00 | 0.00 | 4.69 |
2106 | 4476 | 3.412386 | AGACAAGAATTTTGGGACGGAG | 58.588 | 45.455 | 0.00 | 0.00 | 0.00 | 4.63 |
2107 | 4477 | 2.488153 | GACAAGAATTTTGGGACGGAGG | 59.512 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
2108 | 4478 | 1.818674 | CAAGAATTTTGGGACGGAGGG | 59.181 | 52.381 | 0.00 | 0.00 | 0.00 | 4.30 |
2109 | 4479 | 1.368374 | AGAATTTTGGGACGGAGGGA | 58.632 | 50.000 | 0.00 | 0.00 | 0.00 | 4.20 |
2110 | 4480 | 1.282157 | AGAATTTTGGGACGGAGGGAG | 59.718 | 52.381 | 0.00 | 0.00 | 0.00 | 4.30 |
2111 | 4481 | 1.004394 | GAATTTTGGGACGGAGGGAGT | 59.996 | 52.381 | 0.00 | 0.00 | 0.00 | 3.85 |
2112 | 4482 | 1.961133 | ATTTTGGGACGGAGGGAGTA | 58.039 | 50.000 | 0.00 | 0.00 | 0.00 | 2.59 |
2113 | 4483 | 1.732117 | TTTTGGGACGGAGGGAGTAA | 58.268 | 50.000 | 0.00 | 0.00 | 0.00 | 2.24 |
2114 | 4484 | 1.961133 | TTTGGGACGGAGGGAGTAAT | 58.039 | 50.000 | 0.00 | 0.00 | 0.00 | 1.89 |
2115 | 4485 | 2.852714 | TTGGGACGGAGGGAGTAATA | 57.147 | 50.000 | 0.00 | 0.00 | 0.00 | 0.98 |
2116 | 4486 | 2.852714 | TGGGACGGAGGGAGTAATAA | 57.147 | 50.000 | 0.00 | 0.00 | 0.00 | 1.40 |
2117 | 4487 | 2.674420 | TGGGACGGAGGGAGTAATAAG | 58.326 | 52.381 | 0.00 | 0.00 | 0.00 | 1.73 |
2118 | 4488 | 2.023695 | TGGGACGGAGGGAGTAATAAGT | 60.024 | 50.000 | 0.00 | 0.00 | 0.00 | 2.24 |
2119 | 4489 | 3.036819 | GGGACGGAGGGAGTAATAAGTT | 58.963 | 50.000 | 0.00 | 0.00 | 0.00 | 2.66 |
2120 | 4490 | 3.069300 | GGGACGGAGGGAGTAATAAGTTC | 59.931 | 52.174 | 0.00 | 0.00 | 0.00 | 3.01 |
2121 | 4491 | 3.703052 | GGACGGAGGGAGTAATAAGTTCA | 59.297 | 47.826 | 0.00 | 0.00 | 0.00 | 3.18 |
2122 | 4492 | 4.441217 | GGACGGAGGGAGTAATAAGTTCAC | 60.441 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
2123 | 4493 | 3.450096 | ACGGAGGGAGTAATAAGTTCACC | 59.550 | 47.826 | 0.00 | 0.00 | 0.00 | 4.02 |
2124 | 4494 | 3.705072 | CGGAGGGAGTAATAAGTTCACCT | 59.295 | 47.826 | 0.00 | 0.00 | 0.00 | 4.00 |
2125 | 4495 | 4.161754 | CGGAGGGAGTAATAAGTTCACCTT | 59.838 | 45.833 | 0.00 | 0.00 | 37.17 | 3.50 |
2126 | 4496 | 5.338137 | CGGAGGGAGTAATAAGTTCACCTTT | 60.338 | 44.000 | 0.00 | 0.00 | 34.46 | 3.11 |
2127 | 4497 | 6.482524 | GGAGGGAGTAATAAGTTCACCTTTT | 58.517 | 40.000 | 0.00 | 0.00 | 34.46 | 2.27 |
2128 | 4498 | 6.946583 | GGAGGGAGTAATAAGTTCACCTTTTT | 59.053 | 38.462 | 0.00 | 0.00 | 34.46 | 1.94 |
2204 | 4574 | 3.003480 | CACGAGGAGGAACAAGGATTTC | 58.997 | 50.000 | 0.00 | 0.00 | 0.00 | 2.17 |
2215 | 4585 | 1.665679 | CAAGGATTTCGACATCACGGG | 59.334 | 52.381 | 13.28 | 0.00 | 0.00 | 5.28 |
2224 | 4594 | 6.988622 | TTTCGACATCACGGGTATTATTTT | 57.011 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
2363 | 4800 | 2.115291 | GGCTTCCTTCATCACCGGC | 61.115 | 63.158 | 0.00 | 0.00 | 0.00 | 6.13 |
2412 | 4849 | 7.277098 | GTCGAACCATTAGTGCTTAATTAGTCA | 59.723 | 37.037 | 0.00 | 0.00 | 29.37 | 3.41 |
2439 | 4876 | 1.401409 | CCGCCACTGCATAAGTTGTTG | 60.401 | 52.381 | 0.00 | 0.00 | 36.83 | 3.33 |
2487 | 4924 | 5.923733 | ATGTGTGTTGGGAGTAAACAAAA | 57.076 | 34.783 | 0.00 | 0.00 | 39.14 | 2.44 |
2494 | 4931 | 8.192110 | TGTGTTGGGAGTAAACAAAAATTAGTC | 58.808 | 33.333 | 0.00 | 0.00 | 39.14 | 2.59 |
2532 | 4969 | 5.585047 | GCCAACTAGGAGTAACAATAACTGG | 59.415 | 44.000 | 0.00 | 0.00 | 41.22 | 4.00 |
2541 | 4978 | 6.441093 | AGTAACAATAACTGGCATCATGTG | 57.559 | 37.500 | 0.00 | 0.00 | 0.00 | 3.21 |
2566 | 5003 | 6.075046 | GCAGTACATGTATGTATGTGTGTACG | 60.075 | 42.308 | 9.18 | 5.06 | 44.25 | 3.67 |
2597 | 5700 | 6.806249 | GTGTGTGTATGTGGTGATAATTTTGG | 59.194 | 38.462 | 0.00 | 0.00 | 0.00 | 3.28 |
2676 | 5780 | 7.944554 | AGGAATTCAGAAGACCTTACAAATCAA | 59.055 | 33.333 | 7.93 | 0.00 | 0.00 | 2.57 |
2723 | 5827 | 5.665459 | ACAACTATCTATCTTGTCCTGTGC | 58.335 | 41.667 | 0.00 | 0.00 | 0.00 | 4.57 |
2728 | 5832 | 3.865446 | TCTATCTTGTCCTGTGCATGTG | 58.135 | 45.455 | 0.00 | 0.00 | 0.00 | 3.21 |
2732 | 5836 | 1.267806 | CTTGTCCTGTGCATGTGGAAC | 59.732 | 52.381 | 6.82 | 3.70 | 37.35 | 3.62 |
2763 | 5867 | 2.175715 | AGAAGCCCATGTTATCCCCTTC | 59.824 | 50.000 | 0.00 | 0.00 | 0.00 | 3.46 |
2785 | 5889 | 7.361713 | CCTTCAATAAAAACTAGATCGGCAACA | 60.362 | 37.037 | 0.00 | 0.00 | 0.00 | 3.33 |
2787 | 5891 | 6.653320 | TCAATAAAAACTAGATCGGCAACACT | 59.347 | 34.615 | 0.00 | 0.00 | 0.00 | 3.55 |
2789 | 5893 | 3.963428 | AAACTAGATCGGCAACACTCT | 57.037 | 42.857 | 0.00 | 0.00 | 0.00 | 3.24 |
2793 | 5897 | 2.839486 | AGATCGGCAACACTCTTTGA | 57.161 | 45.000 | 0.00 | 0.00 | 0.00 | 2.69 |
2804 | 5908 | 0.393077 | ACTCTTTGACGTGAGGGTGG | 59.607 | 55.000 | 0.00 | 0.00 | 34.84 | 4.61 |
2821 | 5925 | 3.808036 | GCGGTGCCAACGATATGT | 58.192 | 55.556 | 6.20 | 0.00 | 0.00 | 2.29 |
2827 | 5931 | 2.477863 | GGTGCCAACGATATGTTCAAGC | 60.478 | 50.000 | 0.00 | 0.00 | 39.29 | 4.01 |
2828 | 5932 | 1.742831 | TGCCAACGATATGTTCAAGCC | 59.257 | 47.619 | 0.00 | 0.00 | 39.29 | 4.35 |
2843 | 5947 | 1.879380 | CAAGCCGTGGAAGATCAAACA | 59.121 | 47.619 | 0.00 | 0.00 | 0.00 | 2.83 |
2852 | 5956 | 3.129813 | TGGAAGATCAAACAGCATGATGC | 59.870 | 43.478 | 11.67 | 9.89 | 45.46 | 3.91 |
2920 | 6070 | 1.726791 | ACATCATCGAGTTCAACACGC | 59.273 | 47.619 | 2.06 | 0.00 | 32.32 | 5.34 |
3046 | 6199 | 6.992664 | ATATGAGCAGGAACATAAGAGAGT | 57.007 | 37.500 | 0.00 | 0.00 | 33.63 | 3.24 |
3051 | 6205 | 7.450074 | TGAGCAGGAACATAAGAGAGTAAAAA | 58.550 | 34.615 | 0.00 | 0.00 | 0.00 | 1.94 |
3087 | 6242 | 7.596995 | GCAATAGAGAGATAAAACTACGATGCT | 59.403 | 37.037 | 0.00 | 0.00 | 0.00 | 3.79 |
3092 | 6266 | 9.509956 | AGAGAGATAAAACTACGATGCTATAGT | 57.490 | 33.333 | 0.84 | 0.00 | 32.93 | 2.12 |
3107 | 6281 | 8.406297 | CGATGCTATAGTTAGGCATACAATAGA | 58.594 | 37.037 | 0.84 | 0.00 | 45.14 | 1.98 |
3121 | 6295 | 7.355778 | GCATACAATAGATAGCTTGGTTCAAC | 58.644 | 38.462 | 0.00 | 0.00 | 0.00 | 3.18 |
3141 | 6315 | 0.040058 | TGCCTCCATGAGTGCCATTT | 59.960 | 50.000 | 0.00 | 0.00 | 31.94 | 2.32 |
3145 | 6319 | 3.824133 | CCTCCATGAGTGCCATTTCATA | 58.176 | 45.455 | 0.00 | 0.00 | 32.96 | 2.15 |
3156 | 6330 | 4.155462 | GTGCCATTTCATATGAGATGCGAT | 59.845 | 41.667 | 24.23 | 4.90 | 35.89 | 4.58 |
3198 | 6385 | 1.063492 | TGTCCTACTTCCGGATGCCTA | 60.063 | 52.381 | 16.84 | 2.76 | 32.25 | 3.93 |
3387 | 6576 | 4.437390 | GCATCCTTTTGACACTACCAATCG | 60.437 | 45.833 | 0.00 | 0.00 | 0.00 | 3.34 |
3393 | 6582 | 6.425721 | CCTTTTGACACTACCAATCGAAAGTA | 59.574 | 38.462 | 10.71 | 0.00 | 40.22 | 2.24 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
0 | 1 | 7.654022 | TTGAGAAGGTGTTTCTTAATGGTTT | 57.346 | 32.000 | 0.00 | 0.00 | 46.12 | 3.27 |
2 | 3 | 7.654022 | TTTTGAGAAGGTGTTTCTTAATGGT | 57.346 | 32.000 | 0.00 | 0.00 | 46.12 | 3.55 |
3 | 4 | 9.546428 | AATTTTTGAGAAGGTGTTTCTTAATGG | 57.454 | 29.630 | 0.00 | 0.00 | 46.12 | 3.16 |
8 | 9 | 9.500785 | TTTTCAATTTTTGAGAAGGTGTTTCTT | 57.499 | 25.926 | 0.00 | 0.00 | 46.12 | 2.52 |
10 | 11 | 9.706846 | CATTTTCAATTTTTGAGAAGGTGTTTC | 57.293 | 29.630 | 0.73 | 0.00 | 41.38 | 2.78 |
11 | 12 | 9.447157 | TCATTTTCAATTTTTGAGAAGGTGTTT | 57.553 | 25.926 | 5.48 | 0.00 | 41.38 | 2.83 |
12 | 13 | 8.882736 | GTCATTTTCAATTTTTGAGAAGGTGTT | 58.117 | 29.630 | 5.48 | 0.00 | 41.38 | 3.32 |
13 | 14 | 8.040132 | TGTCATTTTCAATTTTTGAGAAGGTGT | 58.960 | 29.630 | 5.48 | 0.00 | 41.38 | 4.16 |
14 | 15 | 8.422973 | TGTCATTTTCAATTTTTGAGAAGGTG | 57.577 | 30.769 | 5.48 | 0.00 | 41.38 | 4.00 |
15 | 16 | 9.617523 | AATGTCATTTTCAATTTTTGAGAAGGT | 57.382 | 25.926 | 0.00 | 0.00 | 41.38 | 3.50 |
44 | 45 | 7.406104 | AGAATACTTTAGCACCTTCAAGGATT | 58.594 | 34.615 | 11.59 | 0.00 | 37.67 | 3.01 |
45 | 46 | 6.963322 | AGAATACTTTAGCACCTTCAAGGAT | 58.037 | 36.000 | 11.59 | 0.00 | 37.67 | 3.24 |
46 | 47 | 6.374417 | AGAATACTTTAGCACCTTCAAGGA | 57.626 | 37.500 | 11.59 | 0.00 | 37.67 | 3.36 |
47 | 48 | 6.094186 | GGAAGAATACTTTAGCACCTTCAAGG | 59.906 | 42.308 | 0.22 | 0.22 | 37.70 | 3.61 |
48 | 49 | 6.881602 | AGGAAGAATACTTTAGCACCTTCAAG | 59.118 | 38.462 | 0.00 | 0.00 | 36.39 | 3.02 |
49 | 50 | 6.655003 | CAGGAAGAATACTTTAGCACCTTCAA | 59.345 | 38.462 | 0.00 | 0.00 | 36.39 | 2.69 |
50 | 51 | 6.173339 | CAGGAAGAATACTTTAGCACCTTCA | 58.827 | 40.000 | 0.00 | 0.00 | 36.39 | 3.02 |
51 | 52 | 5.065346 | GCAGGAAGAATACTTTAGCACCTTC | 59.935 | 44.000 | 0.00 | 0.00 | 36.39 | 3.46 |
52 | 53 | 4.944317 | GCAGGAAGAATACTTTAGCACCTT | 59.056 | 41.667 | 0.00 | 0.00 | 36.39 | 3.50 |
53 | 54 | 4.019321 | TGCAGGAAGAATACTTTAGCACCT | 60.019 | 41.667 | 0.00 | 0.00 | 36.39 | 4.00 |
54 | 55 | 4.261801 | TGCAGGAAGAATACTTTAGCACC | 58.738 | 43.478 | 0.00 | 0.00 | 36.39 | 5.01 |
55 | 56 | 5.880054 | TTGCAGGAAGAATACTTTAGCAC | 57.120 | 39.130 | 0.00 | 0.00 | 37.26 | 4.40 |
56 | 57 | 6.490040 | AGTTTTGCAGGAAGAATACTTTAGCA | 59.510 | 34.615 | 0.00 | 0.00 | 36.39 | 3.49 |
57 | 58 | 6.914259 | AGTTTTGCAGGAAGAATACTTTAGC | 58.086 | 36.000 | 0.00 | 0.00 | 36.39 | 3.09 |
58 | 59 | 9.220767 | ACTAGTTTTGCAGGAAGAATACTTTAG | 57.779 | 33.333 | 0.00 | 0.00 | 36.39 | 1.85 |
59 | 60 | 9.216117 | GACTAGTTTTGCAGGAAGAATACTTTA | 57.784 | 33.333 | 0.00 | 0.00 | 36.39 | 1.85 |
60 | 61 | 7.719633 | TGACTAGTTTTGCAGGAAGAATACTTT | 59.280 | 33.333 | 0.00 | 0.00 | 36.39 | 2.66 |
61 | 62 | 7.224297 | TGACTAGTTTTGCAGGAAGAATACTT | 58.776 | 34.615 | 0.00 | 0.00 | 39.24 | 2.24 |
62 | 63 | 6.769512 | TGACTAGTTTTGCAGGAAGAATACT | 58.230 | 36.000 | 0.00 | 0.00 | 0.00 | 2.12 |
63 | 64 | 6.651225 | ACTGACTAGTTTTGCAGGAAGAATAC | 59.349 | 38.462 | 12.47 | 0.00 | 31.66 | 1.89 |
64 | 65 | 6.769512 | ACTGACTAGTTTTGCAGGAAGAATA | 58.230 | 36.000 | 12.47 | 0.00 | 31.66 | 1.75 |
65 | 66 | 5.625150 | ACTGACTAGTTTTGCAGGAAGAAT | 58.375 | 37.500 | 12.47 | 0.00 | 31.66 | 2.40 |
66 | 67 | 5.036117 | ACTGACTAGTTTTGCAGGAAGAA | 57.964 | 39.130 | 12.47 | 0.00 | 31.66 | 2.52 |
67 | 68 | 4.689612 | ACTGACTAGTTTTGCAGGAAGA | 57.310 | 40.909 | 12.47 | 0.00 | 31.66 | 2.87 |
68 | 69 | 5.542779 | AGTACTGACTAGTTTTGCAGGAAG | 58.457 | 41.667 | 12.47 | 0.00 | 38.36 | 3.46 |
69 | 70 | 5.510861 | GGAGTACTGACTAGTTTTGCAGGAA | 60.511 | 44.000 | 0.00 | 0.20 | 38.36 | 3.36 |
70 | 71 | 4.021368 | GGAGTACTGACTAGTTTTGCAGGA | 60.021 | 45.833 | 0.00 | 2.74 | 38.36 | 3.86 |
71 | 72 | 4.246458 | GGAGTACTGACTAGTTTTGCAGG | 58.754 | 47.826 | 0.00 | 0.00 | 38.36 | 4.85 |
112 | 113 | 8.669946 | TTGACTTCACACAAATCTAATACACA | 57.330 | 30.769 | 0.00 | 0.00 | 0.00 | 3.72 |
114 | 115 | 9.337396 | AGTTTGACTTCACACAAATCTAATACA | 57.663 | 29.630 | 0.00 | 0.00 | 38.09 | 2.29 |
126 | 127 | 4.923281 | ACTTTGCAAAGTTTGACTTCACAC | 59.077 | 37.500 | 33.85 | 0.00 | 46.52 | 3.82 |
301 | 302 | 9.899226 | CCCTTCTGTTCTTTTAAAGTTTATCTG | 57.101 | 33.333 | 4.53 | 0.00 | 0.00 | 2.90 |
302 | 303 | 9.862149 | TCCCTTCTGTTCTTTTAAAGTTTATCT | 57.138 | 29.630 | 4.53 | 0.00 | 0.00 | 1.98 |
304 | 305 | 9.642343 | ACTCCCTTCTGTTCTTTTAAAGTTTAT | 57.358 | 29.630 | 4.53 | 0.00 | 0.00 | 1.40 |
306 | 307 | 7.956328 | ACTCCCTTCTGTTCTTTTAAAGTTT | 57.044 | 32.000 | 4.53 | 0.00 | 0.00 | 2.66 |
307 | 308 | 8.050930 | TGTACTCCCTTCTGTTCTTTTAAAGTT | 58.949 | 33.333 | 4.53 | 0.00 | 0.00 | 2.66 |
308 | 309 | 7.571025 | TGTACTCCCTTCTGTTCTTTTAAAGT | 58.429 | 34.615 | 4.53 | 0.00 | 0.00 | 2.66 |
309 | 310 | 8.622948 | ATGTACTCCCTTCTGTTCTTTTAAAG | 57.377 | 34.615 | 0.00 | 0.00 | 0.00 | 1.85 |
310 | 311 | 8.846211 | CAATGTACTCCCTTCTGTTCTTTTAAA | 58.154 | 33.333 | 0.00 | 0.00 | 0.00 | 1.52 |
311 | 312 | 8.215050 | TCAATGTACTCCCTTCTGTTCTTTTAA | 58.785 | 33.333 | 0.00 | 0.00 | 0.00 | 1.52 |
312 | 313 | 7.741785 | TCAATGTACTCCCTTCTGTTCTTTTA | 58.258 | 34.615 | 0.00 | 0.00 | 0.00 | 1.52 |
313 | 314 | 6.601332 | TCAATGTACTCCCTTCTGTTCTTTT | 58.399 | 36.000 | 0.00 | 0.00 | 0.00 | 2.27 |
314 | 315 | 6.187727 | TCAATGTACTCCCTTCTGTTCTTT | 57.812 | 37.500 | 0.00 | 0.00 | 0.00 | 2.52 |
315 | 316 | 5.825593 | TCAATGTACTCCCTTCTGTTCTT | 57.174 | 39.130 | 0.00 | 0.00 | 0.00 | 2.52 |
316 | 317 | 5.723887 | AGATCAATGTACTCCCTTCTGTTCT | 59.276 | 40.000 | 0.00 | 0.00 | 0.00 | 3.01 |
317 | 318 | 5.983540 | AGATCAATGTACTCCCTTCTGTTC | 58.016 | 41.667 | 0.00 | 0.00 | 0.00 | 3.18 |
318 | 319 | 6.380079 | AAGATCAATGTACTCCCTTCTGTT | 57.620 | 37.500 | 0.00 | 0.00 | 0.00 | 3.16 |
319 | 320 | 6.407525 | GCTAAGATCAATGTACTCCCTTCTGT | 60.408 | 42.308 | 0.00 | 0.00 | 0.00 | 3.41 |
320 | 321 | 5.988561 | GCTAAGATCAATGTACTCCCTTCTG | 59.011 | 44.000 | 0.00 | 0.00 | 0.00 | 3.02 |
321 | 322 | 5.902431 | AGCTAAGATCAATGTACTCCCTTCT | 59.098 | 40.000 | 0.00 | 0.00 | 0.00 | 2.85 |
322 | 323 | 5.988561 | CAGCTAAGATCAATGTACTCCCTTC | 59.011 | 44.000 | 0.00 | 0.00 | 0.00 | 3.46 |
323 | 324 | 5.426833 | ACAGCTAAGATCAATGTACTCCCTT | 59.573 | 40.000 | 0.00 | 0.00 | 0.00 | 3.95 |
324 | 325 | 4.965532 | ACAGCTAAGATCAATGTACTCCCT | 59.034 | 41.667 | 0.00 | 0.00 | 0.00 | 4.20 |
325 | 326 | 5.069781 | AGACAGCTAAGATCAATGTACTCCC | 59.930 | 44.000 | 0.00 | 0.00 | 0.00 | 4.30 |
326 | 327 | 6.155475 | AGACAGCTAAGATCAATGTACTCC | 57.845 | 41.667 | 0.00 | 0.00 | 0.00 | 3.85 |
327 | 328 | 8.795786 | CTAAGACAGCTAAGATCAATGTACTC | 57.204 | 38.462 | 0.00 | 0.00 | 0.00 | 2.59 |
365 | 366 | 4.164204 | CCCTCTTTCCCTAAGCTAGCTAT | 58.836 | 47.826 | 19.70 | 10.93 | 33.66 | 2.97 |
366 | 367 | 3.577919 | CCCTCTTTCCCTAAGCTAGCTA | 58.422 | 50.000 | 19.70 | 5.71 | 33.66 | 3.32 |
367 | 368 | 2.403561 | CCCTCTTTCCCTAAGCTAGCT | 58.596 | 52.381 | 12.68 | 12.68 | 33.66 | 3.32 |
368 | 369 | 1.202710 | GCCCTCTTTCCCTAAGCTAGC | 60.203 | 57.143 | 6.62 | 6.62 | 33.66 | 3.42 |
369 | 370 | 2.119495 | TGCCCTCTTTCCCTAAGCTAG | 58.881 | 52.381 | 0.00 | 0.00 | 33.66 | 3.42 |
370 | 371 | 2.263895 | TGCCCTCTTTCCCTAAGCTA | 57.736 | 50.000 | 0.00 | 0.00 | 33.66 | 3.32 |
371 | 372 | 1.601248 | ATGCCCTCTTTCCCTAAGCT | 58.399 | 50.000 | 0.00 | 0.00 | 33.66 | 3.74 |
372 | 373 | 2.302260 | GAATGCCCTCTTTCCCTAAGC | 58.698 | 52.381 | 0.00 | 0.00 | 33.66 | 3.09 |
373 | 374 | 2.170607 | TCGAATGCCCTCTTTCCCTAAG | 59.829 | 50.000 | 0.00 | 0.00 | 35.04 | 2.18 |
375 | 376 | 1.762957 | CTCGAATGCCCTCTTTCCCTA | 59.237 | 52.381 | 0.00 | 0.00 | 0.00 | 3.53 |
376 | 377 | 0.543749 | CTCGAATGCCCTCTTTCCCT | 59.456 | 55.000 | 0.00 | 0.00 | 0.00 | 4.20 |
377 | 378 | 0.464554 | CCTCGAATGCCCTCTTTCCC | 60.465 | 60.000 | 0.00 | 0.00 | 0.00 | 3.97 |
380 | 381 | 0.543749 | CTCCCTCGAATGCCCTCTTT | 59.456 | 55.000 | 0.00 | 0.00 | 0.00 | 2.52 |
382 | 383 | 1.764054 | CCTCCCTCGAATGCCCTCT | 60.764 | 63.158 | 0.00 | 0.00 | 0.00 | 3.69 |
386 | 387 | 4.570874 | GCCCCTCCCTCGAATGCC | 62.571 | 72.222 | 0.00 | 0.00 | 0.00 | 4.40 |
388 | 389 | 4.241555 | CCGCCCCTCCCTCGAATG | 62.242 | 72.222 | 0.00 | 0.00 | 0.00 | 2.67 |
432 | 440 | 0.758734 | TCATCGTGGCCAATCCTAGG | 59.241 | 55.000 | 7.24 | 0.82 | 35.26 | 3.02 |
433 | 441 | 2.158900 | AGTTCATCGTGGCCAATCCTAG | 60.159 | 50.000 | 7.24 | 0.00 | 35.26 | 3.02 |
434 | 442 | 1.837439 | AGTTCATCGTGGCCAATCCTA | 59.163 | 47.619 | 7.24 | 0.00 | 35.26 | 2.94 |
435 | 443 | 0.620556 | AGTTCATCGTGGCCAATCCT | 59.379 | 50.000 | 7.24 | 0.00 | 35.26 | 3.24 |
442 | 450 | 1.599542 | GCCTTATCAGTTCATCGTGGC | 59.400 | 52.381 | 0.00 | 0.00 | 0.00 | 5.01 |
446 | 454 | 2.791560 | CGTCAGCCTTATCAGTTCATCG | 59.208 | 50.000 | 0.00 | 0.00 | 0.00 | 3.84 |
464 | 472 | 2.048127 | AGTTGAGCCGCCTTCGTC | 60.048 | 61.111 | 0.00 | 0.00 | 0.00 | 4.20 |
468 | 476 | 2.262915 | CTCGAGTTGAGCCGCCTT | 59.737 | 61.111 | 3.62 | 0.00 | 38.03 | 4.35 |
476 | 484 | 1.737735 | CACATGCCGCTCGAGTTGA | 60.738 | 57.895 | 15.13 | 0.00 | 0.00 | 3.18 |
477 | 485 | 2.780643 | CACATGCCGCTCGAGTTG | 59.219 | 61.111 | 15.13 | 7.07 | 0.00 | 3.16 |
478 | 486 | 3.121030 | GCACATGCCGCTCGAGTT | 61.121 | 61.111 | 15.13 | 0.00 | 34.31 | 3.01 |
479 | 487 | 4.377708 | TGCACATGCCGCTCGAGT | 62.378 | 61.111 | 15.13 | 0.00 | 41.18 | 4.18 |
480 | 488 | 3.857854 | GTGCACATGCCGCTCGAG | 61.858 | 66.667 | 13.17 | 8.45 | 41.18 | 4.04 |
519 | 534 | 2.977178 | CTCAGCCCGAGCACTTCT | 59.023 | 61.111 | 0.00 | 0.00 | 43.56 | 2.85 |
689 | 705 | 0.596083 | CCACGATAGGAGAGCGCTTG | 60.596 | 60.000 | 13.26 | 1.42 | 41.93 | 4.01 |
691 | 707 | 2.851071 | GCCACGATAGGAGAGCGCT | 61.851 | 63.158 | 11.27 | 11.27 | 41.93 | 5.92 |
737 | 753 | 2.652530 | CAGCATGCCCTTTTGCGT | 59.347 | 55.556 | 15.66 | 0.00 | 43.61 | 5.24 |
776 | 807 | 5.422214 | AAAATATCTTGGTCAGAGGTCGT | 57.578 | 39.130 | 0.00 | 0.00 | 33.87 | 4.34 |
779 | 810 | 5.510430 | GGGAAAAATATCTTGGTCAGAGGT | 58.490 | 41.667 | 0.00 | 0.00 | 33.87 | 3.85 |
788 | 819 | 7.227512 | AGAGACATAAGCGGGAAAAATATCTTG | 59.772 | 37.037 | 0.00 | 0.00 | 0.00 | 3.02 |
798 | 829 | 3.628008 | TGAGTAGAGACATAAGCGGGAA | 58.372 | 45.455 | 0.00 | 0.00 | 0.00 | 3.97 |
799 | 830 | 3.215151 | CTGAGTAGAGACATAAGCGGGA | 58.785 | 50.000 | 0.00 | 0.00 | 0.00 | 5.14 |
805 | 836 | 4.402793 | GTGGCTTCCTGAGTAGAGACATAA | 59.597 | 45.833 | 0.00 | 0.00 | 28.43 | 1.90 |
806 | 837 | 3.954904 | GTGGCTTCCTGAGTAGAGACATA | 59.045 | 47.826 | 0.00 | 0.00 | 28.43 | 2.29 |
807 | 838 | 2.763448 | GTGGCTTCCTGAGTAGAGACAT | 59.237 | 50.000 | 0.00 | 0.00 | 28.43 | 3.06 |
871 | 903 | 0.711670 | GCGACGCTGATAACGTTGAA | 59.288 | 50.000 | 13.73 | 0.00 | 45.74 | 2.69 |
913 | 950 | 4.391155 | AGTTGGTTGACGTTTATAGCCAA | 58.609 | 39.130 | 0.00 | 0.00 | 32.85 | 4.52 |
924 | 961 | 1.588674 | TTGGCACTAGTTGGTTGACG | 58.411 | 50.000 | 0.00 | 0.00 | 0.00 | 4.35 |
960 | 997 | 3.270877 | AGATGTCACCGTATTTGCTTCC | 58.729 | 45.455 | 0.00 | 0.00 | 0.00 | 3.46 |
964 | 1001 | 3.553511 | CAGAGAGATGTCACCGTATTTGC | 59.446 | 47.826 | 0.00 | 0.00 | 0.00 | 3.68 |
970 | 1007 | 1.189752 | ATGCAGAGAGATGTCACCGT | 58.810 | 50.000 | 0.00 | 0.00 | 0.00 | 4.83 |
1069 | 1109 | 1.271840 | TACCCGATCCCTTTGCTGCT | 61.272 | 55.000 | 0.00 | 0.00 | 0.00 | 4.24 |
1307 | 2189 | 4.462508 | ACAGAAGACACACATGATCGAT | 57.537 | 40.909 | 0.00 | 0.00 | 0.00 | 3.59 |
1308 | 2190 | 3.942130 | ACAGAAGACACACATGATCGA | 57.058 | 42.857 | 0.00 | 0.00 | 0.00 | 3.59 |
1309 | 2191 | 5.501413 | GCAATACAGAAGACACACATGATCG | 60.501 | 44.000 | 0.00 | 0.00 | 0.00 | 3.69 |
1310 | 2192 | 5.583854 | AGCAATACAGAAGACACACATGATC | 59.416 | 40.000 | 0.00 | 0.00 | 0.00 | 2.92 |
1716 | 3550 | 3.248024 | ACTCCTGGTCAGTTGGTTCATA | 58.752 | 45.455 | 0.00 | 0.00 | 0.00 | 2.15 |
1731 | 3565 | 1.672356 | CTCGGTGGCCAAACTCCTG | 60.672 | 63.158 | 7.24 | 0.00 | 0.00 | 3.86 |
1782 | 3616 | 2.622977 | GGTTGTGATAAATCCTGGGGCA | 60.623 | 50.000 | 0.00 | 0.00 | 0.00 | 5.36 |
1827 | 3661 | 9.886132 | CCATTAATTAGGTTACACAAGTACTCT | 57.114 | 33.333 | 0.00 | 0.00 | 0.00 | 3.24 |
1828 | 3662 | 9.880157 | TCCATTAATTAGGTTACACAAGTACTC | 57.120 | 33.333 | 0.00 | 0.00 | 0.00 | 2.59 |
1829 | 3663 | 9.886132 | CTCCATTAATTAGGTTACACAAGTACT | 57.114 | 33.333 | 0.00 | 0.00 | 0.00 | 2.73 |
1830 | 3664 | 9.662947 | ACTCCATTAATTAGGTTACACAAGTAC | 57.337 | 33.333 | 0.00 | 0.00 | 0.00 | 2.73 |
1832 | 3666 | 9.886132 | CTACTCCATTAATTAGGTTACACAAGT | 57.114 | 33.333 | 0.00 | 0.00 | 0.00 | 3.16 |
1833 | 3667 | 8.827677 | GCTACTCCATTAATTAGGTTACACAAG | 58.172 | 37.037 | 0.00 | 0.00 | 0.00 | 3.16 |
1846 | 3680 | 9.643693 | CAAGAAAACATTTGCTACTCCATTAAT | 57.356 | 29.630 | 0.00 | 0.00 | 0.00 | 1.40 |
1882 | 4252 | 6.015434 | CCTGGTTAAAAATTAGTGAGGTGCTT | 60.015 | 38.462 | 0.00 | 0.00 | 0.00 | 3.91 |
1889 | 4259 | 6.339587 | CCAAGCCTGGTTAAAAATTAGTGA | 57.660 | 37.500 | 0.00 | 0.00 | 38.00 | 3.41 |
1914 | 4284 | 8.908786 | TTCTGATAACATCTCACTGAAAACTT | 57.091 | 30.769 | 0.00 | 0.00 | 0.00 | 2.66 |
1915 | 4285 | 8.908786 | TTTCTGATAACATCTCACTGAAAACT | 57.091 | 30.769 | 0.00 | 0.00 | 0.00 | 2.66 |
1916 | 4286 | 9.950680 | TTTTTCTGATAACATCTCACTGAAAAC | 57.049 | 29.630 | 0.00 | 0.00 | 37.75 | 2.43 |
1918 | 4288 | 9.342308 | ACTTTTTCTGATAACATCTCACTGAAA | 57.658 | 29.630 | 0.00 | 0.00 | 0.00 | 2.69 |
1919 | 4289 | 8.908786 | ACTTTTTCTGATAACATCTCACTGAA | 57.091 | 30.769 | 0.00 | 0.00 | 0.00 | 3.02 |
1920 | 4290 | 8.908786 | AACTTTTTCTGATAACATCTCACTGA | 57.091 | 30.769 | 0.00 | 0.00 | 0.00 | 3.41 |
1921 | 4291 | 9.956720 | AAAACTTTTTCTGATAACATCTCACTG | 57.043 | 29.630 | 0.00 | 0.00 | 0.00 | 3.66 |
1988 | 4358 | 6.206829 | AGACAAAAATTTTAAGACGGAGGGAG | 59.793 | 38.462 | 3.34 | 0.00 | 0.00 | 4.30 |
1990 | 4360 | 6.327279 | AGACAAAAATTTTAAGACGGAGGG | 57.673 | 37.500 | 3.34 | 0.00 | 0.00 | 4.30 |
1992 | 4362 | 9.893305 | ATGTAAGACAAAAATTTTAAGACGGAG | 57.107 | 29.630 | 3.34 | 0.00 | 0.00 | 4.63 |
2025 | 4395 | 9.857656 | AAGACATGACTTGATACATCCATATTT | 57.142 | 29.630 | 9.67 | 0.00 | 0.00 | 1.40 |
2028 | 4398 | 9.147732 | ACTAAGACATGACTTGATACATCCATA | 57.852 | 33.333 | 18.80 | 0.00 | 0.00 | 2.74 |
2029 | 4399 | 8.027524 | ACTAAGACATGACTTGATACATCCAT | 57.972 | 34.615 | 18.80 | 0.00 | 0.00 | 3.41 |
2030 | 4400 | 7.423844 | ACTAAGACATGACTTGATACATCCA | 57.576 | 36.000 | 18.80 | 0.00 | 0.00 | 3.41 |
2031 | 4401 | 9.988815 | AATACTAAGACATGACTTGATACATCC | 57.011 | 33.333 | 18.80 | 0.00 | 0.00 | 3.51 |
2042 | 4412 | 9.776158 | CGGATGTATCTAATACTAAGACATGAC | 57.224 | 37.037 | 0.00 | 0.00 | 36.70 | 3.06 |
2043 | 4413 | 9.516546 | ACGGATGTATCTAATACTAAGACATGA | 57.483 | 33.333 | 0.00 | 0.00 | 36.70 | 3.07 |
2052 | 4422 | 9.955102 | TGTCTACATACGGATGTATCTAATACT | 57.045 | 33.333 | 20.64 | 0.00 | 45.42 | 2.12 |
2063 | 4433 | 9.093970 | TGTCTTAAATTTGTCTACATACGGATG | 57.906 | 33.333 | 5.94 | 5.94 | 39.16 | 3.51 |
2064 | 4434 | 9.661563 | TTGTCTTAAATTTGTCTACATACGGAT | 57.338 | 29.630 | 0.00 | 0.00 | 0.00 | 4.18 |
2065 | 4435 | 9.146984 | CTTGTCTTAAATTTGTCTACATACGGA | 57.853 | 33.333 | 0.00 | 0.00 | 0.00 | 4.69 |
2066 | 4436 | 9.146984 | TCTTGTCTTAAATTTGTCTACATACGG | 57.853 | 33.333 | 0.00 | 0.00 | 0.00 | 4.02 |
2074 | 4444 | 9.546428 | CCCAAAATTCTTGTCTTAAATTTGTCT | 57.454 | 29.630 | 0.00 | 0.00 | 33.95 | 3.41 |
2075 | 4445 | 9.541143 | TCCCAAAATTCTTGTCTTAAATTTGTC | 57.459 | 29.630 | 0.00 | 0.00 | 33.95 | 3.18 |
2076 | 4446 | 9.325198 | GTCCCAAAATTCTTGTCTTAAATTTGT | 57.675 | 29.630 | 0.00 | 0.00 | 33.95 | 2.83 |
2077 | 4447 | 8.487176 | CGTCCCAAAATTCTTGTCTTAAATTTG | 58.513 | 33.333 | 0.00 | 0.00 | 33.95 | 2.32 |
2078 | 4448 | 7.655732 | CCGTCCCAAAATTCTTGTCTTAAATTT | 59.344 | 33.333 | 0.00 | 0.00 | 34.86 | 1.82 |
2079 | 4449 | 7.014808 | TCCGTCCCAAAATTCTTGTCTTAAATT | 59.985 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
2080 | 4450 | 6.492087 | TCCGTCCCAAAATTCTTGTCTTAAAT | 59.508 | 34.615 | 0.00 | 0.00 | 0.00 | 1.40 |
2081 | 4451 | 5.828859 | TCCGTCCCAAAATTCTTGTCTTAAA | 59.171 | 36.000 | 0.00 | 0.00 | 0.00 | 1.52 |
2082 | 4452 | 5.378332 | TCCGTCCCAAAATTCTTGTCTTAA | 58.622 | 37.500 | 0.00 | 0.00 | 0.00 | 1.85 |
2083 | 4453 | 4.975631 | TCCGTCCCAAAATTCTTGTCTTA | 58.024 | 39.130 | 0.00 | 0.00 | 0.00 | 2.10 |
2084 | 4454 | 3.821033 | CTCCGTCCCAAAATTCTTGTCTT | 59.179 | 43.478 | 0.00 | 0.00 | 0.00 | 3.01 |
2085 | 4455 | 3.412386 | CTCCGTCCCAAAATTCTTGTCT | 58.588 | 45.455 | 0.00 | 0.00 | 0.00 | 3.41 |
2086 | 4456 | 2.488153 | CCTCCGTCCCAAAATTCTTGTC | 59.512 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
2087 | 4457 | 2.514803 | CCTCCGTCCCAAAATTCTTGT | 58.485 | 47.619 | 0.00 | 0.00 | 0.00 | 3.16 |
2088 | 4458 | 1.818674 | CCCTCCGTCCCAAAATTCTTG | 59.181 | 52.381 | 0.00 | 0.00 | 0.00 | 3.02 |
2089 | 4459 | 1.708551 | TCCCTCCGTCCCAAAATTCTT | 59.291 | 47.619 | 0.00 | 0.00 | 0.00 | 2.52 |
2090 | 4460 | 1.282157 | CTCCCTCCGTCCCAAAATTCT | 59.718 | 52.381 | 0.00 | 0.00 | 0.00 | 2.40 |
2091 | 4461 | 1.004394 | ACTCCCTCCGTCCCAAAATTC | 59.996 | 52.381 | 0.00 | 0.00 | 0.00 | 2.17 |
2092 | 4462 | 1.073098 | ACTCCCTCCGTCCCAAAATT | 58.927 | 50.000 | 0.00 | 0.00 | 0.00 | 1.82 |
2093 | 4463 | 1.961133 | TACTCCCTCCGTCCCAAAAT | 58.039 | 50.000 | 0.00 | 0.00 | 0.00 | 1.82 |
2094 | 4464 | 1.732117 | TTACTCCCTCCGTCCCAAAA | 58.268 | 50.000 | 0.00 | 0.00 | 0.00 | 2.44 |
2095 | 4465 | 1.961133 | ATTACTCCCTCCGTCCCAAA | 58.039 | 50.000 | 0.00 | 0.00 | 0.00 | 3.28 |
2096 | 4466 | 2.852714 | TATTACTCCCTCCGTCCCAA | 57.147 | 50.000 | 0.00 | 0.00 | 0.00 | 4.12 |
2097 | 4467 | 2.023695 | ACTTATTACTCCCTCCGTCCCA | 60.024 | 50.000 | 0.00 | 0.00 | 0.00 | 4.37 |
2098 | 4468 | 2.675583 | ACTTATTACTCCCTCCGTCCC | 58.324 | 52.381 | 0.00 | 0.00 | 0.00 | 4.46 |
2099 | 4469 | 3.703052 | TGAACTTATTACTCCCTCCGTCC | 59.297 | 47.826 | 0.00 | 0.00 | 0.00 | 4.79 |
2100 | 4470 | 4.441217 | GGTGAACTTATTACTCCCTCCGTC | 60.441 | 50.000 | 0.00 | 0.00 | 0.00 | 4.79 |
2101 | 4471 | 3.450096 | GGTGAACTTATTACTCCCTCCGT | 59.550 | 47.826 | 0.00 | 0.00 | 0.00 | 4.69 |
2102 | 4472 | 3.705072 | AGGTGAACTTATTACTCCCTCCG | 59.295 | 47.826 | 0.00 | 0.00 | 0.00 | 4.63 |
2103 | 4473 | 5.695424 | AAGGTGAACTTATTACTCCCTCC | 57.305 | 43.478 | 0.00 | 0.00 | 37.74 | 4.30 |
2104 | 4474 | 7.997773 | AAAAAGGTGAACTTATTACTCCCTC | 57.002 | 36.000 | 0.00 | 0.00 | 38.85 | 4.30 |
2126 | 4496 | 8.442374 | AGTGAACTTATTACTACCCTGGAAAAA | 58.558 | 33.333 | 0.00 | 0.00 | 0.00 | 1.94 |
2127 | 4497 | 7.981142 | AGTGAACTTATTACTACCCTGGAAAA | 58.019 | 34.615 | 0.00 | 0.00 | 0.00 | 2.29 |
2128 | 4498 | 7.563724 | AGTGAACTTATTACTACCCTGGAAA | 57.436 | 36.000 | 0.00 | 0.00 | 0.00 | 3.13 |
2129 | 4499 | 7.563724 | AAGTGAACTTATTACTACCCTGGAA | 57.436 | 36.000 | 0.00 | 0.00 | 33.79 | 3.53 |
2130 | 4500 | 7.563724 | AAAGTGAACTTATTACTACCCTGGA | 57.436 | 36.000 | 0.00 | 0.00 | 34.61 | 3.86 |
2131 | 4501 | 8.101419 | AGAAAAGTGAACTTATTACTACCCTGG | 58.899 | 37.037 | 0.00 | 0.00 | 34.61 | 4.45 |
2138 | 4508 | 9.944376 | TCAGCATAGAAAAGTGAACTTATTACT | 57.056 | 29.630 | 0.00 | 0.00 | 34.61 | 2.24 |
2143 | 4513 | 9.283768 | TCATTTCAGCATAGAAAAGTGAACTTA | 57.716 | 29.630 | 0.00 | 0.00 | 40.54 | 2.24 |
2144 | 4514 | 8.078596 | GTCATTTCAGCATAGAAAAGTGAACTT | 58.921 | 33.333 | 3.63 | 0.00 | 40.54 | 2.66 |
2145 | 4515 | 7.571983 | CGTCATTTCAGCATAGAAAAGTGAACT | 60.572 | 37.037 | 3.63 | 0.00 | 40.54 | 3.01 |
2162 | 4532 | 3.625313 | TGCAAAGTGAACTCGTCATTTCA | 59.375 | 39.130 | 0.00 | 0.00 | 38.90 | 2.69 |
2166 | 4536 | 1.526887 | CGTGCAAAGTGAACTCGTCAT | 59.473 | 47.619 | 0.00 | 0.00 | 38.90 | 3.06 |
2204 | 4574 | 5.294799 | TCCAAAAATAATACCCGTGATGTCG | 59.705 | 40.000 | 0.00 | 0.00 | 0.00 | 4.35 |
2224 | 4594 | 6.823182 | CGTATCCATCTGCCAAATATATCCAA | 59.177 | 38.462 | 0.00 | 0.00 | 0.00 | 3.53 |
2363 | 4800 | 1.517257 | GTCGACGCAGATGACCTGG | 60.517 | 63.158 | 0.00 | 0.00 | 43.13 | 4.45 |
2412 | 4849 | 0.469494 | TATGCAGTGGCGGTGATGAT | 59.531 | 50.000 | 0.00 | 0.00 | 45.35 | 2.45 |
2466 | 4903 | 5.723672 | TTTTTGTTTACTCCCAACACACA | 57.276 | 34.783 | 0.00 | 0.00 | 33.81 | 3.72 |
2494 | 4931 | 9.071276 | ACTCCTAGTTGGCATCATTATTTATTG | 57.929 | 33.333 | 0.00 | 0.00 | 35.26 | 1.90 |
2499 | 4936 | 7.573710 | TGTTACTCCTAGTTGGCATCATTATT | 58.426 | 34.615 | 0.00 | 0.00 | 35.26 | 1.40 |
2500 | 4937 | 7.136822 | TGTTACTCCTAGTTGGCATCATTAT | 57.863 | 36.000 | 0.00 | 0.00 | 35.26 | 1.28 |
2501 | 4938 | 6.553953 | TGTTACTCCTAGTTGGCATCATTA | 57.446 | 37.500 | 0.00 | 0.00 | 35.26 | 1.90 |
2541 | 4978 | 6.075046 | CGTACACACATACATACATGTACTGC | 60.075 | 42.308 | 7.96 | 0.00 | 45.11 | 4.40 |
2566 | 5003 | 2.473609 | CACCACATACACACACGTACAC | 59.526 | 50.000 | 0.00 | 0.00 | 0.00 | 2.90 |
2578 | 5681 | 9.174166 | AGTAGTTCCAAAATTATCACCACATAC | 57.826 | 33.333 | 0.00 | 0.00 | 0.00 | 2.39 |
2700 | 5804 | 5.187772 | TGCACAGGACAAGATAGATAGTTGT | 59.812 | 40.000 | 0.00 | 0.00 | 37.12 | 3.32 |
2701 | 5805 | 5.664457 | TGCACAGGACAAGATAGATAGTTG | 58.336 | 41.667 | 0.00 | 0.00 | 0.00 | 3.16 |
2702 | 5806 | 5.939764 | TGCACAGGACAAGATAGATAGTT | 57.060 | 39.130 | 0.00 | 0.00 | 0.00 | 2.24 |
2703 | 5807 | 5.365025 | ACATGCACAGGACAAGATAGATAGT | 59.635 | 40.000 | 0.00 | 0.00 | 0.00 | 2.12 |
2704 | 5808 | 5.695363 | CACATGCACAGGACAAGATAGATAG | 59.305 | 44.000 | 0.00 | 0.00 | 0.00 | 2.08 |
2723 | 5827 | 2.981560 | GCACCCTGCGTTCCACATG | 61.982 | 63.158 | 0.00 | 0.00 | 31.71 | 3.21 |
2763 | 5867 | 6.842163 | AGTGTTGCCGATCTAGTTTTTATTG | 58.158 | 36.000 | 0.00 | 0.00 | 0.00 | 1.90 |
2775 | 5879 | 1.126846 | CGTCAAAGAGTGTTGCCGATC | 59.873 | 52.381 | 0.00 | 0.00 | 0.00 | 3.69 |
2785 | 5889 | 0.393077 | CCACCCTCACGTCAAAGAGT | 59.607 | 55.000 | 0.00 | 0.00 | 0.00 | 3.24 |
2787 | 5891 | 1.070786 | GCCACCCTCACGTCAAAGA | 59.929 | 57.895 | 0.00 | 0.00 | 0.00 | 2.52 |
2789 | 5893 | 2.280524 | CGCCACCCTCACGTCAAA | 60.281 | 61.111 | 0.00 | 0.00 | 0.00 | 2.69 |
2804 | 5908 | 0.027586 | GAACATATCGTTGGCACCGC | 59.972 | 55.000 | 0.00 | 0.00 | 38.19 | 5.68 |
2809 | 5913 | 1.268032 | CGGCTTGAACATATCGTTGGC | 60.268 | 52.381 | 0.00 | 0.00 | 38.19 | 4.52 |
2814 | 5918 | 1.934589 | TCCACGGCTTGAACATATCG | 58.065 | 50.000 | 0.00 | 0.00 | 0.00 | 2.92 |
2821 | 5925 | 2.552315 | GTTTGATCTTCCACGGCTTGAA | 59.448 | 45.455 | 0.00 | 0.00 | 0.00 | 2.69 |
2827 | 5931 | 1.522668 | TGCTGTTTGATCTTCCACGG | 58.477 | 50.000 | 0.00 | 0.00 | 0.00 | 4.94 |
2828 | 5932 | 2.743664 | TCATGCTGTTTGATCTTCCACG | 59.256 | 45.455 | 0.00 | 0.00 | 0.00 | 4.94 |
2843 | 5947 | 5.628130 | ACCTTCATACTAATGCATCATGCT | 58.372 | 37.500 | 11.84 | 0.00 | 45.31 | 3.79 |
2882 | 6032 | 7.589587 | CGATGATGTTACTCTTCTGATACAGTC | 59.410 | 40.741 | 0.00 | 0.00 | 32.61 | 3.51 |
2889 | 6039 | 6.151144 | TGAACTCGATGATGTTACTCTTCTGA | 59.849 | 38.462 | 0.00 | 0.00 | 0.00 | 3.27 |
2920 | 6070 | 8.908786 | TGGGTTAGCTTTTATAATCTCATGAG | 57.091 | 34.615 | 17.07 | 17.07 | 0.00 | 2.90 |
3020 | 6173 | 8.928448 | ACTCTCTTATGTTCCTGCTCATATTAA | 58.072 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
3046 | 6199 | 6.065374 | TCTCTATTGCCACTGTTGGTTTTTA | 58.935 | 36.000 | 0.00 | 0.00 | 45.98 | 1.52 |
3051 | 6205 | 2.906389 | TCTCTCTATTGCCACTGTTGGT | 59.094 | 45.455 | 0.00 | 0.00 | 45.98 | 3.67 |
3092 | 6266 | 7.316393 | ACCAAGCTATCTATTGTATGCCTAA | 57.684 | 36.000 | 0.00 | 0.00 | 0.00 | 2.69 |
3107 | 6281 | 2.619074 | GGAGGCAGTTGAACCAAGCTAT | 60.619 | 50.000 | 5.27 | 0.00 | 0.00 | 2.97 |
3121 | 6295 | 0.395311 | AATGGCACTCATGGAGGCAG | 60.395 | 55.000 | 12.85 | 0.00 | 41.26 | 4.85 |
3141 | 6315 | 3.405823 | TTGGCATCGCATCTCATATGA | 57.594 | 42.857 | 5.07 | 5.07 | 0.00 | 2.15 |
3145 | 6319 | 5.242171 | TGATATTTTTGGCATCGCATCTCAT | 59.758 | 36.000 | 0.00 | 0.00 | 0.00 | 2.90 |
3156 | 6330 | 6.757237 | ACAAACATCACTGATATTTTTGGCA | 58.243 | 32.000 | 16.78 | 0.00 | 0.00 | 4.92 |
3198 | 6385 | 2.934886 | ATTTGCTGGGCACAAAACAT | 57.065 | 40.000 | 0.00 | 0.00 | 40.19 | 2.71 |
3272 | 6459 | 7.703298 | AATTTCATTACATATGTGTGCATGC | 57.297 | 32.000 | 18.81 | 11.82 | 39.39 | 4.06 |
3350 | 6537 | 8.028938 | GTCAAAAGGATGCAGTACATTTGTAAT | 58.971 | 33.333 | 12.39 | 0.00 | 39.84 | 1.89 |
3361 | 6550 | 3.181445 | TGGTAGTGTCAAAAGGATGCAGT | 60.181 | 43.478 | 0.00 | 0.00 | 0.00 | 4.40 |
![](/static/images/cyverse_long.png)
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.