Multiple sequence alignment - TraesCS5B01G530500

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G530500 chr5B 100.000 3646 0 0 1 3646 689119498 689115853 0.000000e+00 6734
1 TraesCS5B01G530500 chr5B 85.612 417 30 13 2796 3207 507639699 507640090 9.420000e-111 411
2 TraesCS5B01G530500 chr5B 90.775 271 20 5 3231 3500 507641006 507641272 1.250000e-94 357
3 TraesCS5B01G530500 chr5D 94.098 1830 81 9 778 2582 545945052 545943225 0.000000e+00 2756
4 TraesCS5B01G530500 chr5D 84.994 813 79 22 1 779 545952697 545951894 0.000000e+00 785
5 TraesCS5B01G530500 chr5D 86.617 269 15 11 2544 2797 545943225 545942963 9.970000e-71 278
6 TraesCS5B01G530500 chr4A 91.883 1503 81 21 1053 2533 623384780 623386263 0.000000e+00 2061
7 TraesCS5B01G530500 chr2A 83.373 421 33 10 2796 3207 166250480 166250088 4.480000e-94 355
8 TraesCS5B01G530500 chr2A 91.124 169 13 2 3231 3399 166249667 166249501 1.020000e-55 228
9 TraesCS5B01G530500 chr2A 91.129 124 9 2 3372 3494 166250358 166250480 2.250000e-37 167
10 TraesCS5B01G530500 chr2A 96.774 62 2 0 3433 3494 166249503 166249442 1.790000e-18 104
11 TraesCS5B01G530500 chr3B 83.135 421 34 10 2796 3207 118790908 118790516 2.080000e-92 350
12 TraesCS5B01G530500 chr3B 91.124 169 14 1 3231 3399 118790011 118789844 1.020000e-55 228
13 TraesCS5B01G530500 chr3B 96.825 63 2 0 3433 3495 118789846 118789784 4.980000e-19 106
14 TraesCS5B01G530500 chr5A 92.903 155 11 0 2796 2950 669768735 669768581 3.660000e-55 226
15 TraesCS5B01G530500 chr5A 96.581 117 3 1 3379 3495 669767948 669767833 3.720000e-45 193


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G530500 chr5B 689115853 689119498 3645 True 6734.0 6734 100.000000 1 3646 1 chr5B.!!$R1 3645
1 TraesCS5B01G530500 chr5B 507639699 507641272 1573 False 384.0 411 88.193500 2796 3500 2 chr5B.!!$F1 704
2 TraesCS5B01G530500 chr5D 545942963 545945052 2089 True 1517.0 2756 90.357500 778 2797 2 chr5D.!!$R2 2019
3 TraesCS5B01G530500 chr5D 545951894 545952697 803 True 785.0 785 84.994000 1 779 1 chr5D.!!$R1 778
4 TraesCS5B01G530500 chr4A 623384780 623386263 1483 False 2061.0 2061 91.883000 1053 2533 1 chr4A.!!$F1 1480
5 TraesCS5B01G530500 chr2A 166249442 166250480 1038 True 229.0 355 90.423667 2796 3494 3 chr2A.!!$R1 698
6 TraesCS5B01G530500 chr3B 118789784 118790908 1124 True 228.0 350 90.361333 2796 3495 3 chr3B.!!$R1 699
7 TraesCS5B01G530500 chr5A 669767833 669768735 902 True 209.5 226 94.742000 2796 3495 2 chr5A.!!$R1 699

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
576 602 0.030235 GAAAGTTGTGGTCGGTTGGC 59.970 55.0 0.00 0.0 0.00 4.52 F
593 619 0.456653 GGCGCTCGTCTACCGTTTTA 60.457 55.0 7.64 0.0 37.94 1.52 F
594 620 0.637236 GCGCTCGTCTACCGTTTTAC 59.363 55.0 0.00 0.0 37.94 2.01 F
813 839 0.747283 CCAGATGTCTTGAGCCCTGC 60.747 60.0 0.00 0.0 0.00 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1967 2026 1.328069 CAGCGTCTCGTAGAAGTCGAT 59.672 52.381 0.00 0.0 36.73 3.59 R
2588 2699 5.954752 TCAGAATCAGTTCACAGATAGGAGT 59.045 40.000 0.00 0.0 36.79 3.85 R
2591 2702 5.990386 CCATCAGAATCAGTTCACAGATAGG 59.010 44.000 0.00 0.0 36.79 2.57 R
2707 2836 0.110147 CGTTTGGCAAATCCGCGTAA 60.110 50.000 16.74 0.0 37.80 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 0.985490 GGAGGAGGAAGCCCATGTCT 60.985 60.000 0.00 0.00 33.88 3.41
43 44 2.906897 AGTTGCCGCAACCACCAG 60.907 61.111 28.50 0.00 44.49 4.00
57 58 4.847516 CCAGCGGCGTCGAATCGA 62.848 66.667 16.53 0.00 39.00 3.59
67 68 3.036026 TCGAATCGACTGAAGCAGC 57.964 52.632 0.00 0.00 34.37 5.25
82 83 4.742201 AGCAGCGGTCGCATTCGT 62.742 61.111 17.71 0.00 44.88 3.85
89 90 1.068474 CGGTCGCATTCGTCTTCTTT 58.932 50.000 0.00 0.00 36.96 2.52
92 93 1.719780 GTCGCATTCGTCTTCTTTCGT 59.280 47.619 0.00 0.00 36.96 3.85
110 111 1.802880 CGTACCCCGAAGAATCTGCTG 60.803 57.143 0.00 0.00 39.56 4.41
117 118 2.392821 CGAAGAATCTGCTGAGGATCG 58.607 52.381 0.00 3.44 38.61 3.69
124 125 1.028130 CTGCTGAGGATCGAGCTACA 58.972 55.000 0.00 0.30 39.12 2.74
125 126 1.001487 CTGCTGAGGATCGAGCTACAG 60.001 57.143 17.91 17.91 39.12 2.74
145 146 2.358247 GCAACCGGGCTTCGAGAA 60.358 61.111 6.32 0.00 42.43 2.87
148 149 0.320421 CAACCGGGCTTCGAGAAGAA 60.320 55.000 16.23 0.00 40.79 2.52
151 152 1.080705 CGGGCTTCGAGAAGAACGT 60.081 57.895 16.23 0.00 40.79 3.99
211 212 1.003118 TCTAGCTTCAAATGTGGCGGT 59.997 47.619 0.00 0.00 0.00 5.68
212 213 2.235155 TCTAGCTTCAAATGTGGCGGTA 59.765 45.455 0.00 0.00 0.00 4.02
245 271 2.495866 CAATGGATTGGCGGTGGC 59.504 61.111 0.00 0.00 34.22 5.01
265 291 1.666011 GAGCGGTGTGAGAACCTCA 59.334 57.895 0.00 0.00 38.25 3.86
271 297 3.040147 GGTGTGAGAACCTCAAATCGA 57.960 47.619 0.00 0.00 42.46 3.59
287 313 2.813179 CGAGCGATGGAAAAGCGGG 61.813 63.158 0.00 0.00 38.39 6.13
289 315 2.750237 GCGATGGAAAAGCGGGGT 60.750 61.111 0.00 0.00 38.39 4.95
290 316 3.051392 GCGATGGAAAAGCGGGGTG 62.051 63.158 0.00 0.00 38.39 4.61
292 318 2.679996 ATGGAAAAGCGGGGTGGC 60.680 61.111 0.00 0.00 0.00 5.01
295 321 2.358984 GAAAAGCGGGGTGGCGTA 60.359 61.111 0.00 0.00 38.18 4.42
296 322 2.359478 AAAAGCGGGGTGGCGTAG 60.359 61.111 0.00 0.00 38.18 3.51
310 336 4.735132 GTAGCAGCGGGTGTGCGA 62.735 66.667 9.16 0.00 46.06 5.10
311 337 4.435436 TAGCAGCGGGTGTGCGAG 62.435 66.667 9.16 0.00 46.06 5.03
317 343 3.047877 CGGGTGTGCGAGGGAAAC 61.048 66.667 0.00 0.00 0.00 2.78
387 413 4.569023 GCGGGGCGGCAAAATAGC 62.569 66.667 12.47 2.48 0.00 2.97
388 414 4.250431 CGGGGCGGCAAAATAGCG 62.250 66.667 12.47 0.00 34.64 4.26
389 415 3.899700 GGGGCGGCAAAATAGCGG 61.900 66.667 12.47 0.00 37.82 5.52
394 420 3.432186 GGCAAAATAGCGGCCGAT 58.568 55.556 33.48 28.73 38.04 4.18
395 421 1.733526 GGCAAAATAGCGGCCGATT 59.266 52.632 33.48 18.51 38.04 3.34
396 422 0.102300 GGCAAAATAGCGGCCGATTT 59.898 50.000 33.48 23.54 38.04 2.17
397 423 1.470805 GGCAAAATAGCGGCCGATTTT 60.471 47.619 33.48 27.71 36.93 1.82
398 424 1.852280 GCAAAATAGCGGCCGATTTTC 59.148 47.619 33.48 19.86 35.12 2.29
399 425 2.733858 GCAAAATAGCGGCCGATTTTCA 60.734 45.455 33.48 8.00 35.12 2.69
400 426 3.108144 CAAAATAGCGGCCGATTTTCAG 58.892 45.455 33.48 16.85 35.12 3.02
401 427 1.308998 AATAGCGGCCGATTTTCAGG 58.691 50.000 33.48 0.00 0.00 3.86
402 428 0.535102 ATAGCGGCCGATTTTCAGGG 60.535 55.000 33.48 0.00 0.00 4.45
403 429 2.602746 TAGCGGCCGATTTTCAGGGG 62.603 60.000 33.48 0.00 0.00 4.79
404 430 2.828549 CGGCCGATTTTCAGGGGG 60.829 66.667 24.07 0.00 0.00 5.40
405 431 2.680965 GGCCGATTTTCAGGGGGA 59.319 61.111 0.00 0.00 0.00 4.81
406 432 1.453928 GGCCGATTTTCAGGGGGAG 60.454 63.158 0.00 0.00 0.00 4.30
407 433 1.453928 GCCGATTTTCAGGGGGAGG 60.454 63.158 0.00 0.00 0.00 4.30
408 434 1.227383 CCGATTTTCAGGGGGAGGG 59.773 63.158 0.00 0.00 0.00 4.30
409 435 1.571773 CCGATTTTCAGGGGGAGGGT 61.572 60.000 0.00 0.00 0.00 4.34
410 436 0.394352 CGATTTTCAGGGGGAGGGTG 60.394 60.000 0.00 0.00 0.00 4.61
411 437 0.999712 GATTTTCAGGGGGAGGGTGA 59.000 55.000 0.00 0.00 0.00 4.02
412 438 1.357761 GATTTTCAGGGGGAGGGTGAA 59.642 52.381 0.00 0.00 0.00 3.18
413 439 0.777446 TTTTCAGGGGGAGGGTGAAG 59.223 55.000 0.00 0.00 32.00 3.02
414 440 1.140134 TTTCAGGGGGAGGGTGAAGG 61.140 60.000 0.00 0.00 32.00 3.46
415 441 3.732849 CAGGGGGAGGGTGAAGGC 61.733 72.222 0.00 0.00 0.00 4.35
448 474 4.154347 GCAGCGAGGGGAGTGGAG 62.154 72.222 0.00 0.00 0.00 3.86
449 475 2.363018 CAGCGAGGGGAGTGGAGA 60.363 66.667 0.00 0.00 0.00 3.71
450 476 2.043450 AGCGAGGGGAGTGGAGAG 60.043 66.667 0.00 0.00 0.00 3.20
451 477 3.151022 GCGAGGGGAGTGGAGAGG 61.151 72.222 0.00 0.00 0.00 3.69
452 478 3.151022 CGAGGGGAGTGGAGAGGC 61.151 72.222 0.00 0.00 0.00 4.70
453 479 2.366570 GAGGGGAGTGGAGAGGCT 59.633 66.667 0.00 0.00 0.00 4.58
454 480 2.040278 AGGGGAGTGGAGAGGCTG 59.960 66.667 0.00 0.00 0.00 4.85
455 481 3.086600 GGGGAGTGGAGAGGCTGG 61.087 72.222 0.00 0.00 0.00 4.85
456 482 2.039624 GGGAGTGGAGAGGCTGGA 59.960 66.667 0.00 0.00 0.00 3.86
457 483 1.383803 GGGAGTGGAGAGGCTGGAT 60.384 63.158 0.00 0.00 0.00 3.41
458 484 1.406860 GGGAGTGGAGAGGCTGGATC 61.407 65.000 0.00 0.00 0.00 3.36
459 485 0.398381 GGAGTGGAGAGGCTGGATCT 60.398 60.000 0.00 0.00 0.00 2.75
460 486 0.752054 GAGTGGAGAGGCTGGATCTG 59.248 60.000 0.00 0.00 0.00 2.90
461 487 0.690411 AGTGGAGAGGCTGGATCTGG 60.690 60.000 0.00 0.00 0.00 3.86
462 488 0.980231 GTGGAGAGGCTGGATCTGGT 60.980 60.000 0.00 0.00 0.00 4.00
463 489 0.979709 TGGAGAGGCTGGATCTGGTG 60.980 60.000 0.00 0.00 0.00 4.17
464 490 0.689080 GGAGAGGCTGGATCTGGTGA 60.689 60.000 0.00 0.00 0.00 4.02
465 491 0.463620 GAGAGGCTGGATCTGGTGAC 59.536 60.000 0.00 0.00 0.00 3.67
466 492 1.142748 GAGGCTGGATCTGGTGACG 59.857 63.158 0.00 0.00 0.00 4.35
467 493 2.187946 GGCTGGATCTGGTGACGG 59.812 66.667 0.00 0.00 38.41 4.79
468 494 2.512515 GCTGGATCTGGTGACGGC 60.513 66.667 0.00 0.00 36.33 5.68
469 495 2.202797 CTGGATCTGGTGACGGCG 60.203 66.667 4.80 4.80 36.33 6.46
470 496 3.723235 CTGGATCTGGTGACGGCGG 62.723 68.421 13.24 0.00 36.33 6.13
471 497 4.530857 GGATCTGGTGACGGCGGG 62.531 72.222 13.24 0.00 36.33 6.13
472 498 4.530857 GATCTGGTGACGGCGGGG 62.531 72.222 13.24 0.00 36.33 5.73
534 560 4.722700 GCATGGCGTGGAGGTGGT 62.723 66.667 9.08 0.00 0.00 4.16
535 561 2.034066 CATGGCGTGGAGGTGGTT 59.966 61.111 0.00 0.00 0.00 3.67
536 562 2.034066 ATGGCGTGGAGGTGGTTG 59.966 61.111 0.00 0.00 0.00 3.77
537 563 4.947147 TGGCGTGGAGGTGGTTGC 62.947 66.667 0.00 0.00 0.00 4.17
540 566 3.345808 CGTGGAGGTGGTTGCGTG 61.346 66.667 0.00 0.00 0.00 5.34
541 567 2.978010 GTGGAGGTGGTTGCGTGG 60.978 66.667 0.00 0.00 0.00 4.94
542 568 3.484806 TGGAGGTGGTTGCGTGGT 61.485 61.111 0.00 0.00 0.00 4.16
543 569 2.141448 TGGAGGTGGTTGCGTGGTA 61.141 57.895 0.00 0.00 0.00 3.25
544 570 1.375523 GGAGGTGGTTGCGTGGTAG 60.376 63.158 0.00 0.00 0.00 3.18
545 571 1.375523 GAGGTGGTTGCGTGGTAGG 60.376 63.158 0.00 0.00 0.00 3.18
546 572 1.823169 GAGGTGGTTGCGTGGTAGGA 61.823 60.000 0.00 0.00 0.00 2.94
547 573 1.375523 GGTGGTTGCGTGGTAGGAG 60.376 63.158 0.00 0.00 0.00 3.69
548 574 1.669440 GTGGTTGCGTGGTAGGAGA 59.331 57.895 0.00 0.00 0.00 3.71
549 575 0.034337 GTGGTTGCGTGGTAGGAGAA 59.966 55.000 0.00 0.00 0.00 2.87
550 576 0.320374 TGGTTGCGTGGTAGGAGAAG 59.680 55.000 0.00 0.00 0.00 2.85
551 577 0.391263 GGTTGCGTGGTAGGAGAAGG 60.391 60.000 0.00 0.00 0.00 3.46
552 578 0.391263 GTTGCGTGGTAGGAGAAGGG 60.391 60.000 0.00 0.00 0.00 3.95
553 579 1.550130 TTGCGTGGTAGGAGAAGGGG 61.550 60.000 0.00 0.00 0.00 4.79
554 580 1.684734 GCGTGGTAGGAGAAGGGGA 60.685 63.158 0.00 0.00 0.00 4.81
555 581 1.677637 GCGTGGTAGGAGAAGGGGAG 61.678 65.000 0.00 0.00 0.00 4.30
556 582 1.043673 CGTGGTAGGAGAAGGGGAGG 61.044 65.000 0.00 0.00 0.00 4.30
557 583 0.691413 GTGGTAGGAGAAGGGGAGGG 60.691 65.000 0.00 0.00 0.00 4.30
558 584 0.858598 TGGTAGGAGAAGGGGAGGGA 60.859 60.000 0.00 0.00 0.00 4.20
559 585 0.342313 GGTAGGAGAAGGGGAGGGAA 59.658 60.000 0.00 0.00 0.00 3.97
560 586 1.274242 GGTAGGAGAAGGGGAGGGAAA 60.274 57.143 0.00 0.00 0.00 3.13
561 587 2.120312 GTAGGAGAAGGGGAGGGAAAG 58.880 57.143 0.00 0.00 0.00 2.62
562 588 0.498685 AGGAGAAGGGGAGGGAAAGT 59.501 55.000 0.00 0.00 0.00 2.66
563 589 1.132036 AGGAGAAGGGGAGGGAAAGTT 60.132 52.381 0.00 0.00 0.00 2.66
564 590 1.004862 GGAGAAGGGGAGGGAAAGTTG 59.995 57.143 0.00 0.00 0.00 3.16
565 591 1.705745 GAGAAGGGGAGGGAAAGTTGT 59.294 52.381 0.00 0.00 0.00 3.32
566 592 1.425448 AGAAGGGGAGGGAAAGTTGTG 59.575 52.381 0.00 0.00 0.00 3.33
567 593 0.482887 AAGGGGAGGGAAAGTTGTGG 59.517 55.000 0.00 0.00 0.00 4.17
568 594 0.701310 AGGGGAGGGAAAGTTGTGGT 60.701 55.000 0.00 0.00 0.00 4.16
569 595 0.251209 GGGGAGGGAAAGTTGTGGTC 60.251 60.000 0.00 0.00 0.00 4.02
570 596 0.605589 GGGAGGGAAAGTTGTGGTCG 60.606 60.000 0.00 0.00 0.00 4.79
571 597 0.605589 GGAGGGAAAGTTGTGGTCGG 60.606 60.000 0.00 0.00 0.00 4.79
572 598 0.108019 GAGGGAAAGTTGTGGTCGGT 59.892 55.000 0.00 0.00 0.00 4.69
573 599 0.549469 AGGGAAAGTTGTGGTCGGTT 59.451 50.000 0.00 0.00 0.00 4.44
574 600 0.666374 GGGAAAGTTGTGGTCGGTTG 59.334 55.000 0.00 0.00 0.00 3.77
575 601 0.666374 GGAAAGTTGTGGTCGGTTGG 59.334 55.000 0.00 0.00 0.00 3.77
576 602 0.030235 GAAAGTTGTGGTCGGTTGGC 59.970 55.000 0.00 0.00 0.00 4.52
577 603 1.720694 AAAGTTGTGGTCGGTTGGCG 61.721 55.000 0.00 0.00 0.00 5.69
578 604 4.322385 GTTGTGGTCGGTTGGCGC 62.322 66.667 0.00 0.00 0.00 6.53
579 605 4.555709 TTGTGGTCGGTTGGCGCT 62.556 61.111 7.64 0.00 0.00 5.92
580 606 4.980805 TGTGGTCGGTTGGCGCTC 62.981 66.667 7.64 0.00 0.00 5.03
584 610 4.719369 GTCGGTTGGCGCTCGTCT 62.719 66.667 7.64 0.00 0.00 4.18
585 611 3.057548 TCGGTTGGCGCTCGTCTA 61.058 61.111 7.64 0.00 0.00 2.59
586 612 2.879462 CGGTTGGCGCTCGTCTAC 60.879 66.667 7.64 0.18 0.00 2.59
587 613 2.508663 GGTTGGCGCTCGTCTACC 60.509 66.667 7.64 11.18 38.30 3.18
588 614 2.879462 GTTGGCGCTCGTCTACCG 60.879 66.667 7.64 0.00 38.13 4.02
589 615 3.367743 TTGGCGCTCGTCTACCGT 61.368 61.111 7.64 0.00 37.94 4.83
590 616 2.922950 TTGGCGCTCGTCTACCGTT 61.923 57.895 7.64 0.00 37.94 4.44
591 617 2.126189 GGCGCTCGTCTACCGTTT 60.126 61.111 7.64 0.00 37.94 3.60
592 618 1.735559 GGCGCTCGTCTACCGTTTT 60.736 57.895 7.64 0.00 37.94 2.43
593 619 0.456653 GGCGCTCGTCTACCGTTTTA 60.457 55.000 7.64 0.00 37.94 1.52
594 620 0.637236 GCGCTCGTCTACCGTTTTAC 59.363 55.000 0.00 0.00 37.94 2.01
595 621 1.967762 CGCTCGTCTACCGTTTTACA 58.032 50.000 0.00 0.00 37.94 2.41
596 622 2.318578 CGCTCGTCTACCGTTTTACAA 58.681 47.619 0.00 0.00 37.94 2.41
597 623 2.089581 CGCTCGTCTACCGTTTTACAAC 59.910 50.000 0.00 0.00 37.94 3.32
598 624 3.052036 GCTCGTCTACCGTTTTACAACA 58.948 45.455 0.00 0.00 37.94 3.33
599 625 3.121227 GCTCGTCTACCGTTTTACAACAC 60.121 47.826 0.00 0.00 37.94 3.32
600 626 4.293415 CTCGTCTACCGTTTTACAACACT 58.707 43.478 0.00 0.00 37.94 3.55
601 627 5.431420 TCGTCTACCGTTTTACAACACTA 57.569 39.130 0.00 0.00 37.94 2.74
602 628 5.451908 TCGTCTACCGTTTTACAACACTAG 58.548 41.667 0.00 0.00 37.94 2.57
603 629 5.238432 TCGTCTACCGTTTTACAACACTAGA 59.762 40.000 0.00 0.00 37.94 2.43
604 630 5.914635 CGTCTACCGTTTTACAACACTAGAA 59.085 40.000 0.00 0.00 32.54 2.10
605 631 6.087291 CGTCTACCGTTTTACAACACTAGAAG 59.913 42.308 0.00 0.00 32.54 2.85
606 632 7.141363 GTCTACCGTTTTACAACACTAGAAGA 58.859 38.462 0.00 0.00 32.54 2.87
607 633 7.811713 GTCTACCGTTTTACAACACTAGAAGAT 59.188 37.037 0.00 0.00 32.54 2.40
608 634 6.780706 ACCGTTTTACAACACTAGAAGATG 57.219 37.500 0.00 0.00 32.54 2.90
609 635 5.699458 ACCGTTTTACAACACTAGAAGATGG 59.301 40.000 0.00 0.00 32.54 3.51
610 636 5.929992 CCGTTTTACAACACTAGAAGATGGA 59.070 40.000 0.00 0.00 32.54 3.41
611 637 6.090898 CCGTTTTACAACACTAGAAGATGGAG 59.909 42.308 0.00 0.00 32.54 3.86
612 638 6.866770 CGTTTTACAACACTAGAAGATGGAGA 59.133 38.462 0.00 0.00 32.54 3.71
613 639 7.545965 CGTTTTACAACACTAGAAGATGGAGAT 59.454 37.037 0.00 0.00 32.54 2.75
614 640 8.660373 GTTTTACAACACTAGAAGATGGAGATG 58.340 37.037 0.00 0.00 32.54 2.90
615 641 4.764172 ACAACACTAGAAGATGGAGATGC 58.236 43.478 0.00 0.00 0.00 3.91
616 642 4.223700 ACAACACTAGAAGATGGAGATGCA 59.776 41.667 0.00 0.00 0.00 3.96
617 643 5.181009 CAACACTAGAAGATGGAGATGCAA 58.819 41.667 0.00 0.00 0.00 4.08
618 644 5.426689 ACACTAGAAGATGGAGATGCAAA 57.573 39.130 0.00 0.00 0.00 3.68
619 645 5.999044 ACACTAGAAGATGGAGATGCAAAT 58.001 37.500 0.00 0.00 0.00 2.32
620 646 6.421485 ACACTAGAAGATGGAGATGCAAATT 58.579 36.000 0.00 0.00 0.00 1.82
621 647 7.568349 ACACTAGAAGATGGAGATGCAAATTA 58.432 34.615 0.00 0.00 0.00 1.40
622 648 7.714377 ACACTAGAAGATGGAGATGCAAATTAG 59.286 37.037 0.00 0.00 0.00 1.73
623 649 6.709846 ACTAGAAGATGGAGATGCAAATTAGC 59.290 38.462 0.00 0.00 0.00 3.09
624 650 4.514441 AGAAGATGGAGATGCAAATTAGCG 59.486 41.667 0.00 0.00 37.31 4.26
625 651 3.813443 AGATGGAGATGCAAATTAGCGT 58.187 40.909 0.00 0.00 37.31 5.07
626 652 4.202441 AGATGGAGATGCAAATTAGCGTT 58.798 39.130 0.00 0.00 37.31 4.84
627 653 3.763097 TGGAGATGCAAATTAGCGTTG 57.237 42.857 0.00 0.00 37.31 4.10
628 654 3.081061 TGGAGATGCAAATTAGCGTTGT 58.919 40.909 0.00 0.00 37.31 3.32
629 655 4.257731 TGGAGATGCAAATTAGCGTTGTA 58.742 39.130 0.00 0.00 37.31 2.41
630 656 4.881273 TGGAGATGCAAATTAGCGTTGTAT 59.119 37.500 0.00 0.00 34.50 2.29
631 657 5.356751 TGGAGATGCAAATTAGCGTTGTATT 59.643 36.000 0.00 0.00 32.34 1.89
632 658 6.127758 TGGAGATGCAAATTAGCGTTGTATTT 60.128 34.615 0.00 0.00 32.34 1.40
633 659 6.751888 GGAGATGCAAATTAGCGTTGTATTTT 59.248 34.615 0.00 0.00 32.34 1.82
634 660 7.913297 GGAGATGCAAATTAGCGTTGTATTTTA 59.087 33.333 0.00 0.00 32.34 1.52
635 661 8.614994 AGATGCAAATTAGCGTTGTATTTTAC 57.385 30.769 0.00 0.00 32.34 2.01
636 662 8.240682 AGATGCAAATTAGCGTTGTATTTTACA 58.759 29.630 0.00 0.00 32.34 2.41
637 663 8.925161 ATGCAAATTAGCGTTGTATTTTACAT 57.075 26.923 0.00 0.00 36.47 2.29
638 664 8.388319 TGCAAATTAGCGTTGTATTTTACATC 57.612 30.769 0.00 0.00 36.47 3.06
639 665 8.023706 TGCAAATTAGCGTTGTATTTTACATCA 58.976 29.630 0.00 0.00 36.47 3.07
640 666 8.311120 GCAAATTAGCGTTGTATTTTACATCAC 58.689 33.333 0.00 0.00 38.68 3.06
641 667 9.554724 CAAATTAGCGTTGTATTTTACATCACT 57.445 29.630 0.00 0.00 38.68 3.41
643 669 9.554724 AATTAGCGTTGTATTTTACATCACTTG 57.445 29.630 0.00 0.00 38.68 3.16
644 670 6.795098 AGCGTTGTATTTTACATCACTTGA 57.205 33.333 0.00 0.00 38.68 3.02
645 671 7.197071 AGCGTTGTATTTTACATCACTTGAA 57.803 32.000 0.00 0.00 38.68 2.69
646 672 7.298122 AGCGTTGTATTTTACATCACTTGAAG 58.702 34.615 0.00 0.00 38.68 3.02
647 673 6.032460 GCGTTGTATTTTACATCACTTGAAGC 59.968 38.462 0.00 0.00 38.68 3.86
648 674 7.075121 CGTTGTATTTTACATCACTTGAAGCA 58.925 34.615 0.00 0.00 38.68 3.91
649 675 7.750458 CGTTGTATTTTACATCACTTGAAGCAT 59.250 33.333 0.00 0.00 38.68 3.79
650 676 8.853345 GTTGTATTTTACATCACTTGAAGCATG 58.147 33.333 0.00 0.00 38.68 4.06
651 677 8.109705 TGTATTTTACATCACTTGAAGCATGT 57.890 30.769 13.12 13.12 32.89 3.21
652 678 8.022550 TGTATTTTACATCACTTGAAGCATGTG 58.977 33.333 16.53 7.01 36.19 3.21
653 679 6.631971 TTTTACATCACTTGAAGCATGTGA 57.368 33.333 16.53 15.45 46.87 3.58
660 686 6.185852 TCACTTGAAGCATGTGATGTAATG 57.814 37.500 10.82 0.00 41.39 1.90
661 687 5.706833 TCACTTGAAGCATGTGATGTAATGT 59.293 36.000 10.82 0.00 41.39 2.71
662 688 6.207221 TCACTTGAAGCATGTGATGTAATGTT 59.793 34.615 10.82 0.00 41.39 2.71
663 689 6.864685 CACTTGAAGCATGTGATGTAATGTTT 59.135 34.615 7.44 0.00 40.46 2.83
664 690 7.383029 CACTTGAAGCATGTGATGTAATGTTTT 59.617 33.333 7.44 0.00 40.46 2.43
665 691 7.596248 ACTTGAAGCATGTGATGTAATGTTTTC 59.404 33.333 0.00 0.00 28.80 2.29
666 692 6.979465 TGAAGCATGTGATGTAATGTTTTCA 58.021 32.000 0.00 0.00 32.33 2.69
667 693 7.604549 TGAAGCATGTGATGTAATGTTTTCAT 58.395 30.769 0.00 0.00 43.05 2.57
668 694 8.738106 TGAAGCATGTGATGTAATGTTTTCATA 58.262 29.630 0.00 0.00 39.94 2.15
669 695 9.740239 GAAGCATGTGATGTAATGTTTTCATAT 57.260 29.630 0.00 0.00 39.94 1.78
670 696 9.740239 AAGCATGTGATGTAATGTTTTCATATC 57.260 29.630 0.00 0.00 39.94 1.63
671 697 9.128404 AGCATGTGATGTAATGTTTTCATATCT 57.872 29.630 0.00 0.00 39.94 1.98
693 719 7.404671 TCTACATTATGTGTTAGACAGAGCA 57.595 36.000 8.26 0.00 42.29 4.26
694 720 7.258441 TCTACATTATGTGTTAGACAGAGCAC 58.742 38.462 8.26 0.00 42.29 4.40
695 721 4.864806 ACATTATGTGTTAGACAGAGCACG 59.135 41.667 0.00 0.00 38.01 5.34
696 722 4.514781 TTATGTGTTAGACAGAGCACGT 57.485 40.909 0.00 0.00 38.23 4.49
697 723 2.134201 TGTGTTAGACAGAGCACGTG 57.866 50.000 12.28 12.28 34.86 4.49
698 724 1.679153 TGTGTTAGACAGAGCACGTGA 59.321 47.619 22.23 0.00 34.86 4.35
699 725 2.296190 TGTGTTAGACAGAGCACGTGAT 59.704 45.455 22.23 14.87 34.86 3.06
700 726 2.663602 GTGTTAGACAGAGCACGTGATG 59.336 50.000 22.23 16.35 0.00 3.07
701 727 2.296190 TGTTAGACAGAGCACGTGATGT 59.704 45.455 22.23 19.55 0.00 3.06
702 728 3.504520 TGTTAGACAGAGCACGTGATGTA 59.495 43.478 22.23 3.69 0.00 2.29
703 729 4.157840 TGTTAGACAGAGCACGTGATGTAT 59.842 41.667 22.23 18.64 0.00 2.29
704 730 3.876274 AGACAGAGCACGTGATGTATT 57.124 42.857 22.23 1.13 0.00 1.89
705 731 4.193826 AGACAGAGCACGTGATGTATTT 57.806 40.909 22.23 0.00 0.00 1.40
706 732 4.569943 AGACAGAGCACGTGATGTATTTT 58.430 39.130 22.23 0.00 0.00 1.82
707 733 4.997395 AGACAGAGCACGTGATGTATTTTT 59.003 37.500 22.23 0.00 0.00 1.94
764 790 7.455641 TTTTTGGCTCGGAGATATGTAAAAA 57.544 32.000 9.69 8.97 33.89 1.94
765 791 7.639113 TTTTGGCTCGGAGATATGTAAAAAT 57.361 32.000 9.69 0.00 33.89 1.82
766 792 6.618287 TTGGCTCGGAGATATGTAAAAATG 57.382 37.500 9.69 0.00 33.89 2.32
767 793 5.063204 TGGCTCGGAGATATGTAAAAATGG 58.937 41.667 9.69 0.00 33.89 3.16
768 794 4.455877 GGCTCGGAGATATGTAAAAATGGG 59.544 45.833 9.69 0.00 33.89 4.00
769 795 5.063880 GCTCGGAGATATGTAAAAATGGGT 58.936 41.667 9.69 0.00 33.89 4.51
770 796 5.531287 GCTCGGAGATATGTAAAAATGGGTT 59.469 40.000 9.69 0.00 33.89 4.11
771 797 6.708949 GCTCGGAGATATGTAAAAATGGGTTA 59.291 38.462 9.69 0.00 33.89 2.85
772 798 7.390718 GCTCGGAGATATGTAAAAATGGGTTAT 59.609 37.037 9.69 0.00 33.89 1.89
773 799 9.284968 CTCGGAGATATGTAAAAATGGGTTATT 57.715 33.333 0.00 0.00 33.89 1.40
774 800 9.635404 TCGGAGATATGTAAAAATGGGTTATTT 57.365 29.630 0.00 0.00 40.67 1.40
813 839 0.747283 CCAGATGTCTTGAGCCCTGC 60.747 60.000 0.00 0.00 0.00 4.85
988 1027 2.564062 CCCACCGAACTAGTAGAAACCA 59.436 50.000 3.59 0.00 0.00 3.67
1047 1091 2.268920 CCGCTCTGCCCTGCTTAA 59.731 61.111 0.00 0.00 0.00 1.85
1077 1125 1.610673 GAGGAGAGGGCAGACACCA 60.611 63.158 0.00 0.00 0.00 4.17
1313 1361 2.557805 CGTGCACTGCATGGTCAC 59.442 61.111 16.19 0.00 41.91 3.67
1319 1367 3.807538 CTGCATGGTCACGCTGCC 61.808 66.667 0.00 0.00 35.02 4.85
1321 1369 2.125147 GCATGGTCACGCTGCCTA 60.125 61.111 0.00 0.00 0.00 3.93
1333 1387 3.219645 CTGCCTAGCTAGCTCCGGC 62.220 68.421 34.40 34.40 40.75 6.13
1346 1400 2.505337 CCGGCGAACGATTGACGA 60.505 61.111 10.16 0.00 44.87 4.20
1355 1409 2.386661 ACGATTGACGAGGATTGCTT 57.613 45.000 0.00 0.00 45.77 3.91
1360 1414 1.953559 TGACGAGGATTGCTTATGGC 58.046 50.000 0.00 0.00 42.22 4.40
1602 1661 1.948145 CAATCTCTTCCATGCTCTGCC 59.052 52.381 0.00 0.00 0.00 4.85
1636 1695 4.916983 ATCTGAGTATCTGACTGTCTGC 57.083 45.455 9.51 0.00 45.98 4.26
1758 1817 2.806621 GGAACGTGTACCCGACGC 60.807 66.667 4.31 0.00 40.56 5.19
1883 1942 2.281900 CCCCTTTCCCGACGCAAA 60.282 61.111 0.00 0.00 0.00 3.68
1911 1970 4.256983 ACCACCAGTGATCTCTCAGATA 57.743 45.455 0.00 0.00 34.53 1.98
1918 1977 7.932491 CACCAGTGATCTCTCAGATAAATCAAT 59.068 37.037 0.00 0.00 34.53 2.57
2523 2596 4.671377 CACAAGCTAGAGTGAGATGAGAC 58.329 47.826 7.84 0.00 37.97 3.36
2585 2696 1.345741 TGCTTAAGCTGTCTGTGCTCT 59.654 47.619 26.90 0.00 40.22 4.09
2586 2697 1.999024 GCTTAAGCTGTCTGTGCTCTC 59.001 52.381 20.38 0.00 40.22 3.20
2587 2698 2.353605 GCTTAAGCTGTCTGTGCTCTCT 60.354 50.000 20.38 0.00 40.22 3.10
2588 2699 3.119316 GCTTAAGCTGTCTGTGCTCTCTA 60.119 47.826 20.38 0.00 40.22 2.43
2589 2700 4.420168 CTTAAGCTGTCTGTGCTCTCTAC 58.580 47.826 0.00 0.00 40.22 2.59
2590 2701 2.214376 AGCTGTCTGTGCTCTCTACT 57.786 50.000 0.00 0.00 35.67 2.57
2591 2702 2.091541 AGCTGTCTGTGCTCTCTACTC 58.908 52.381 0.00 0.00 35.67 2.59
2598 2709 4.515191 GTCTGTGCTCTCTACTCCTATCTG 59.485 50.000 0.00 0.00 0.00 2.90
2611 2722 6.219417 ACTCCTATCTGTGAACTGATTCTG 57.781 41.667 7.95 1.30 36.25 3.02
2618 2729 3.678289 TGTGAACTGATTCTGATGGTGG 58.322 45.455 0.00 0.00 35.69 4.61
2642 2753 7.039434 TGGTTCAACAAATAAATGCTCCATGTA 60.039 33.333 0.00 0.00 0.00 2.29
2643 2754 7.816995 GGTTCAACAAATAAATGCTCCATGTAA 59.183 33.333 0.00 0.00 0.00 2.41
2644 2755 8.863049 GTTCAACAAATAAATGCTCCATGTAAG 58.137 33.333 0.00 0.00 0.00 2.34
2656 2767 4.873259 GCTCCATGTAAGAAGAAGAACTCC 59.127 45.833 0.00 0.00 0.00 3.85
2707 2836 5.819901 TGATTTTCCCAAAACGATTTTGCTT 59.180 32.000 14.06 0.85 46.58 3.91
2745 2874 0.310543 GAATTTGTGTCGCTGCACCA 59.689 50.000 0.00 0.00 38.52 4.17
2778 2907 4.917385 AGGCTGTTGGTACATGTCAATTA 58.083 39.130 0.00 0.00 39.30 1.40
2785 2914 6.376581 TGTTGGTACATGTCAATTATCATGCA 59.623 34.615 0.00 0.00 43.34 3.96
2794 2923 6.798482 TGTCAATTATCATGCAGGTTCATTC 58.202 36.000 0.00 0.00 0.00 2.67
2815 2944 4.912586 TCGGAAGAAAATTGTATGGGACA 58.087 39.130 0.00 0.00 40.02 4.02
2837 2966 1.655329 CCTCATAGTCTCCCGCGTC 59.345 63.158 4.92 0.00 0.00 5.19
2942 3071 6.998074 TGTCTGGGAAAAGGTATAGCAATATG 59.002 38.462 4.48 0.00 0.00 1.78
2943 3072 6.003950 TCTGGGAAAAGGTATAGCAATATGC 58.996 40.000 4.48 0.00 45.46 3.14
2982 3111 2.440539 ACGTATCGATCCCAGCAATC 57.559 50.000 0.00 0.00 0.00 2.67
2983 3112 1.000955 ACGTATCGATCCCAGCAATCC 59.999 52.381 0.00 0.00 0.00 3.01
2984 3113 1.273606 CGTATCGATCCCAGCAATCCT 59.726 52.381 0.00 0.00 0.00 3.24
2985 3114 2.289072 CGTATCGATCCCAGCAATCCTT 60.289 50.000 0.00 0.00 0.00 3.36
2986 3115 2.557920 ATCGATCCCAGCAATCCTTC 57.442 50.000 0.00 0.00 0.00 3.46
2987 3116 0.469917 TCGATCCCAGCAATCCTTCC 59.530 55.000 0.00 0.00 0.00 3.46
3014 3147 1.546961 AGCTACCGATTATCTCCCCG 58.453 55.000 0.00 0.00 0.00 5.73
3015 3148 0.108756 GCTACCGATTATCTCCCCGC 60.109 60.000 0.00 0.00 0.00 6.13
3016 3149 1.546961 CTACCGATTATCTCCCCGCT 58.453 55.000 0.00 0.00 0.00 5.52
3017 3150 1.202582 CTACCGATTATCTCCCCGCTG 59.797 57.143 0.00 0.00 0.00 5.18
3130 3266 4.636435 CCACCCAAGAACGCCGGT 62.636 66.667 1.90 0.00 0.00 5.28
3135 3271 3.110178 CAAGAACGCCGGTCCGAC 61.110 66.667 14.39 0.00 0.00 4.79
3144 3280 3.744719 CGGTCCGACGGAGAGCAA 61.745 66.667 18.98 0.00 29.39 3.91
3167 3303 2.482333 CGTTTGCCGTCCAACCCAA 61.482 57.895 0.00 0.00 31.97 4.12
3185 3323 4.776322 CATCAACGCTGGCCCCGA 62.776 66.667 18.37 0.00 0.00 5.14
3207 3345 0.462759 GAGAGCCAAACATCTCCCCG 60.463 60.000 0.00 0.00 36.72 5.73
3209 3347 0.539986 GAGCCAAACATCTCCCCGTA 59.460 55.000 0.00 0.00 0.00 4.02
3210 3348 0.252197 AGCCAAACATCTCCCCGTAC 59.748 55.000 0.00 0.00 0.00 3.67
3211 3349 0.035820 GCCAAACATCTCCCCGTACA 60.036 55.000 0.00 0.00 0.00 2.90
3212 3350 1.612199 GCCAAACATCTCCCCGTACAA 60.612 52.381 0.00 0.00 0.00 2.41
3239 4360 4.415881 TGTATCCATACAAGGTTGCGAT 57.584 40.909 0.00 0.00 40.08 4.58
3243 4364 2.236146 TCCATACAAGGTTGCGATGACT 59.764 45.455 6.73 0.00 30.46 3.41
3271 4392 3.532155 GTCTGGAGCGGCGGAGAT 61.532 66.667 9.78 0.00 0.00 2.75
3320 4441 8.956426 TGGTTTGTTAGATGGAAAGTATTGATC 58.044 33.333 0.00 0.00 0.00 2.92
3331 4452 6.262944 TGGAAAGTATTGATCCGATTGATTGG 59.737 38.462 0.00 0.00 35.96 3.16
3333 4454 7.444183 GGAAAGTATTGATCCGATTGATTGGTA 59.556 37.037 0.00 0.00 32.41 3.25
3334 4455 8.746052 AAAGTATTGATCCGATTGATTGGTAA 57.254 30.769 0.00 0.00 32.41 2.85
3356 4477 6.808008 AATGTATTGTATCCATACTGCTGC 57.192 37.500 0.00 0.00 34.41 5.25
3359 4480 1.506025 TGTATCCATACTGCTGCCCA 58.494 50.000 0.00 0.00 34.41 5.36
3431 4821 1.069906 GTGTGCAAAGGATGACGTGTC 60.070 52.381 0.00 0.00 0.00 3.67
3495 4886 3.064820 CGTCCCATACAATTTTCTTCCGG 59.935 47.826 0.00 0.00 0.00 5.14
3497 4888 4.461431 GTCCCATACAATTTTCTTCCGGTT 59.539 41.667 0.00 0.00 0.00 4.44
3498 4889 4.703093 TCCCATACAATTTTCTTCCGGTTC 59.297 41.667 0.00 0.00 0.00 3.62
3499 4890 4.461081 CCCATACAATTTTCTTCCGGTTCA 59.539 41.667 0.00 0.00 0.00 3.18
3500 4891 5.127031 CCCATACAATTTTCTTCCGGTTCAT 59.873 40.000 0.00 0.00 0.00 2.57
3501 4892 6.350949 CCCATACAATTTTCTTCCGGTTCATT 60.351 38.462 0.00 0.00 0.00 2.57
3502 4893 7.147983 CCCATACAATTTTCTTCCGGTTCATTA 60.148 37.037 0.00 0.00 0.00 1.90
3503 4894 7.915397 CCATACAATTTTCTTCCGGTTCATTAG 59.085 37.037 0.00 0.00 0.00 1.73
3504 4895 6.267496 ACAATTTTCTTCCGGTTCATTAGG 57.733 37.500 0.00 0.00 0.00 2.69
3505 4896 5.185056 ACAATTTTCTTCCGGTTCATTAGGG 59.815 40.000 0.00 0.00 0.00 3.53
3506 4897 3.359695 TTTCTTCCGGTTCATTAGGGG 57.640 47.619 0.00 0.00 0.00 4.79
3507 4898 1.209621 TCTTCCGGTTCATTAGGGGG 58.790 55.000 0.00 0.00 0.00 5.40
3508 4899 1.209621 CTTCCGGTTCATTAGGGGGA 58.790 55.000 0.00 0.00 0.00 4.81
3509 4900 1.562475 CTTCCGGTTCATTAGGGGGAA 59.438 52.381 0.00 0.00 32.96 3.97
3510 4901 1.671293 TCCGGTTCATTAGGGGGAAA 58.329 50.000 0.00 0.00 0.00 3.13
3511 4902 1.562475 TCCGGTTCATTAGGGGGAAAG 59.438 52.381 0.00 0.00 0.00 2.62
3512 4903 1.409661 CCGGTTCATTAGGGGGAAAGG 60.410 57.143 0.00 0.00 0.00 3.11
3513 4904 1.776662 GGTTCATTAGGGGGAAAGGC 58.223 55.000 0.00 0.00 0.00 4.35
3514 4905 1.688311 GGTTCATTAGGGGGAAAGGCC 60.688 57.143 0.00 0.00 0.00 5.19
3515 4906 0.257616 TTCATTAGGGGGAAAGGCCG 59.742 55.000 0.00 0.00 37.63 6.13
3516 4907 0.917333 TCATTAGGGGGAAAGGCCGT 60.917 55.000 0.00 0.00 37.63 5.68
3517 4908 0.751643 CATTAGGGGGAAAGGCCGTG 60.752 60.000 0.00 0.00 37.63 4.94
3518 4909 1.933307 ATTAGGGGGAAAGGCCGTGG 61.933 60.000 0.00 0.00 37.63 4.94
3521 4912 4.986708 GGGGAAAGGCCGTGGCAA 62.987 66.667 13.76 0.00 44.11 4.52
3522 4913 2.679996 GGGAAAGGCCGTGGCAAT 60.680 61.111 13.76 0.00 44.11 3.56
3523 4914 2.573340 GGAAAGGCCGTGGCAATG 59.427 61.111 13.76 0.00 44.11 2.82
3524 4915 2.275380 GGAAAGGCCGTGGCAATGT 61.275 57.895 13.76 0.00 44.11 2.71
3525 4916 1.665442 GAAAGGCCGTGGCAATGTT 59.335 52.632 13.76 0.33 44.11 2.71
3526 4917 0.033366 GAAAGGCCGTGGCAATGTTT 59.967 50.000 13.76 6.36 44.11 2.83
3527 4918 0.249826 AAAGGCCGTGGCAATGTTTG 60.250 50.000 13.76 0.00 44.11 2.93
3528 4919 2.048316 GGCCGTGGCAATGTTTGG 60.048 61.111 13.76 0.00 44.11 3.28
3529 4920 2.733945 GCCGTGGCAATGTTTGGT 59.266 55.556 5.89 0.00 41.49 3.67
3530 4921 1.068921 GCCGTGGCAATGTTTGGTT 59.931 52.632 5.89 0.00 41.49 3.67
3531 4922 0.531753 GCCGTGGCAATGTTTGGTTT 60.532 50.000 5.89 0.00 41.49 3.27
3532 4923 1.269831 GCCGTGGCAATGTTTGGTTTA 60.270 47.619 5.89 0.00 41.49 2.01
3533 4924 2.671596 CCGTGGCAATGTTTGGTTTAG 58.328 47.619 0.00 0.00 0.00 1.85
3534 4925 2.294791 CCGTGGCAATGTTTGGTTTAGA 59.705 45.455 0.00 0.00 0.00 2.10
3535 4926 3.564511 CGTGGCAATGTTTGGTTTAGAG 58.435 45.455 0.00 0.00 0.00 2.43
3536 4927 3.317150 GTGGCAATGTTTGGTTTAGAGC 58.683 45.455 0.00 0.00 0.00 4.09
3537 4928 3.005791 GTGGCAATGTTTGGTTTAGAGCT 59.994 43.478 0.00 0.00 0.00 4.09
3538 4929 4.217550 GTGGCAATGTTTGGTTTAGAGCTA 59.782 41.667 0.00 0.00 0.00 3.32
3539 4930 4.830046 TGGCAATGTTTGGTTTAGAGCTAA 59.170 37.500 0.00 0.00 0.00 3.09
3540 4931 5.480073 TGGCAATGTTTGGTTTAGAGCTAAT 59.520 36.000 0.00 0.00 0.00 1.73
3541 4932 6.036470 GGCAATGTTTGGTTTAGAGCTAATC 58.964 40.000 0.00 0.00 0.00 1.75
3542 4933 6.350110 GGCAATGTTTGGTTTAGAGCTAATCA 60.350 38.462 0.00 0.00 0.00 2.57
3543 4934 6.528072 GCAATGTTTGGTTTAGAGCTAATCAC 59.472 38.462 0.00 0.00 0.00 3.06
3544 4935 7.575720 GCAATGTTTGGTTTAGAGCTAATCACT 60.576 37.037 0.00 0.00 0.00 3.41
3545 4936 8.946085 CAATGTTTGGTTTAGAGCTAATCACTA 58.054 33.333 0.00 0.00 0.00 2.74
3546 4937 9.686683 AATGTTTGGTTTAGAGCTAATCACTAT 57.313 29.630 0.00 0.00 0.00 2.12
3547 4938 8.492673 TGTTTGGTTTAGAGCTAATCACTATG 57.507 34.615 0.00 0.00 0.00 2.23
3548 4939 8.100791 TGTTTGGTTTAGAGCTAATCACTATGT 58.899 33.333 0.00 0.00 0.00 2.29
3549 4940 8.391106 GTTTGGTTTAGAGCTAATCACTATGTG 58.609 37.037 0.00 0.00 34.45 3.21
3550 4941 6.582636 TGGTTTAGAGCTAATCACTATGTGG 58.417 40.000 0.00 0.00 33.87 4.17
3551 4942 5.992217 GGTTTAGAGCTAATCACTATGTGGG 59.008 44.000 0.00 0.00 33.87 4.61
3552 4943 3.760580 AGAGCTAATCACTATGTGGGC 57.239 47.619 0.00 0.00 33.87 5.36
3553 4944 3.041211 AGAGCTAATCACTATGTGGGCA 58.959 45.455 0.00 0.00 33.87 5.36
3554 4945 3.649981 AGAGCTAATCACTATGTGGGCAT 59.350 43.478 0.00 0.00 39.03 4.40
3555 4946 3.748083 AGCTAATCACTATGTGGGCATG 58.252 45.455 0.00 0.00 36.58 4.06
3556 4947 3.137176 AGCTAATCACTATGTGGGCATGT 59.863 43.478 0.00 0.00 36.58 3.21
3557 4948 3.251729 GCTAATCACTATGTGGGCATGTG 59.748 47.826 0.00 0.00 36.44 3.21
3558 4949 3.370840 AATCACTATGTGGGCATGTGT 57.629 42.857 0.00 0.00 36.47 3.72
3559 4950 4.502105 AATCACTATGTGGGCATGTGTA 57.498 40.909 0.00 0.00 36.47 2.90
3560 4951 3.541996 TCACTATGTGGGCATGTGTAG 57.458 47.619 0.00 0.00 36.47 2.74
3561 4952 2.837591 TCACTATGTGGGCATGTGTAGT 59.162 45.455 0.00 0.00 36.47 2.73
3562 4953 2.938451 CACTATGTGGGCATGTGTAGTG 59.062 50.000 0.00 0.00 33.99 2.74
3563 4954 2.571653 ACTATGTGGGCATGTGTAGTGT 59.428 45.455 0.00 0.00 36.58 3.55
3564 4955 3.772572 ACTATGTGGGCATGTGTAGTGTA 59.227 43.478 0.00 0.00 36.58 2.90
3565 4956 3.712016 ATGTGGGCATGTGTAGTGTAA 57.288 42.857 0.00 0.00 33.37 2.41
3566 4957 3.712016 TGTGGGCATGTGTAGTGTAAT 57.288 42.857 0.00 0.00 0.00 1.89
3567 4958 3.342719 TGTGGGCATGTGTAGTGTAATG 58.657 45.455 0.00 0.00 0.00 1.90
3568 4959 3.244735 TGTGGGCATGTGTAGTGTAATGT 60.245 43.478 0.00 0.00 0.00 2.71
3569 4960 4.020128 TGTGGGCATGTGTAGTGTAATGTA 60.020 41.667 0.00 0.00 0.00 2.29
3570 4961 4.938832 GTGGGCATGTGTAGTGTAATGTAA 59.061 41.667 0.00 0.00 0.00 2.41
3571 4962 5.064707 GTGGGCATGTGTAGTGTAATGTAAG 59.935 44.000 0.00 0.00 0.00 2.34
3572 4963 5.183228 GGGCATGTGTAGTGTAATGTAAGT 58.817 41.667 0.00 0.00 0.00 2.24
3573 4964 6.070710 TGGGCATGTGTAGTGTAATGTAAGTA 60.071 38.462 0.00 0.00 0.00 2.24
3574 4965 6.479001 GGGCATGTGTAGTGTAATGTAAGTAG 59.521 42.308 0.00 0.00 0.00 2.57
3575 4966 7.262772 GGCATGTGTAGTGTAATGTAAGTAGA 58.737 38.462 0.00 0.00 0.00 2.59
3576 4967 7.926555 GGCATGTGTAGTGTAATGTAAGTAGAT 59.073 37.037 0.00 0.00 0.00 1.98
3577 4968 9.314321 GCATGTGTAGTGTAATGTAAGTAGATT 57.686 33.333 0.00 0.00 0.00 2.40
3579 4970 9.817809 ATGTGTAGTGTAATGTAAGTAGATTGG 57.182 33.333 0.00 0.00 0.00 3.16
3580 4971 9.027202 TGTGTAGTGTAATGTAAGTAGATTGGA 57.973 33.333 0.00 0.00 0.00 3.53
3581 4972 9.298774 GTGTAGTGTAATGTAAGTAGATTGGAC 57.701 37.037 0.00 0.00 0.00 4.02
3582 4973 9.251440 TGTAGTGTAATGTAAGTAGATTGGACT 57.749 33.333 0.00 0.00 0.00 3.85
3583 4974 9.517609 GTAGTGTAATGTAAGTAGATTGGACTG 57.482 37.037 0.00 0.00 0.00 3.51
3584 4975 7.556844 AGTGTAATGTAAGTAGATTGGACTGG 58.443 38.462 0.00 0.00 0.00 4.00
3585 4976 7.180408 AGTGTAATGTAAGTAGATTGGACTGGT 59.820 37.037 0.00 0.00 0.00 4.00
3586 4977 7.822822 GTGTAATGTAAGTAGATTGGACTGGTT 59.177 37.037 0.00 0.00 0.00 3.67
3587 4978 8.038944 TGTAATGTAAGTAGATTGGACTGGTTC 58.961 37.037 0.00 0.00 0.00 3.62
3588 4979 6.875972 ATGTAAGTAGATTGGACTGGTTCT 57.124 37.500 0.00 0.00 0.00 3.01
3589 4980 6.282199 TGTAAGTAGATTGGACTGGTTCTC 57.718 41.667 0.00 0.00 0.00 2.87
3590 4981 5.778241 TGTAAGTAGATTGGACTGGTTCTCA 59.222 40.000 0.00 0.00 0.00 3.27
3591 4982 5.825593 AAGTAGATTGGACTGGTTCTCAA 57.174 39.130 0.00 0.00 0.00 3.02
3592 4983 5.825593 AGTAGATTGGACTGGTTCTCAAA 57.174 39.130 0.00 0.00 0.00 2.69
3593 4984 6.187727 AGTAGATTGGACTGGTTCTCAAAA 57.812 37.500 0.00 0.00 0.00 2.44
3594 4985 6.601332 AGTAGATTGGACTGGTTCTCAAAAA 58.399 36.000 0.00 0.00 0.00 1.94
3618 5009 5.368256 AAAAAGAGTAGATTGCACTGCAG 57.632 39.130 13.48 13.48 40.61 4.41
3619 5010 2.687700 AGAGTAGATTGCACTGCAGG 57.312 50.000 19.93 8.27 40.61 4.85
3620 5011 1.905215 AGAGTAGATTGCACTGCAGGT 59.095 47.619 19.93 0.24 40.61 4.00
3621 5012 2.304180 AGAGTAGATTGCACTGCAGGTT 59.696 45.455 19.93 0.00 40.61 3.50
3622 5013 3.077359 GAGTAGATTGCACTGCAGGTTT 58.923 45.455 19.93 0.00 40.61 3.27
3623 5014 4.020218 AGAGTAGATTGCACTGCAGGTTTA 60.020 41.667 19.93 0.65 40.61 2.01
3624 5015 4.848357 AGTAGATTGCACTGCAGGTTTAT 58.152 39.130 19.93 6.02 40.61 1.40
3625 5016 4.637534 AGTAGATTGCACTGCAGGTTTATG 59.362 41.667 19.93 7.83 40.61 1.90
3626 5017 3.424703 AGATTGCACTGCAGGTTTATGT 58.575 40.909 19.93 1.95 40.61 2.29
3627 5018 3.828451 AGATTGCACTGCAGGTTTATGTT 59.172 39.130 19.93 0.00 40.61 2.71
3628 5019 3.367992 TTGCACTGCAGGTTTATGTTG 57.632 42.857 19.93 5.46 40.61 3.33
3629 5020 2.305928 TGCACTGCAGGTTTATGTTGT 58.694 42.857 19.93 0.00 33.32 3.32
3630 5021 2.293122 TGCACTGCAGGTTTATGTTGTC 59.707 45.455 19.93 2.02 33.32 3.18
3631 5022 2.293122 GCACTGCAGGTTTATGTTGTCA 59.707 45.455 19.93 0.00 0.00 3.58
3632 5023 3.057315 GCACTGCAGGTTTATGTTGTCAT 60.057 43.478 19.93 0.00 38.00 3.06
3633 5024 4.478699 CACTGCAGGTTTATGTTGTCATG 58.521 43.478 19.93 0.00 35.70 3.07
3634 5025 4.022935 CACTGCAGGTTTATGTTGTCATGT 60.023 41.667 19.93 0.00 35.70 3.21
3635 5026 4.022935 ACTGCAGGTTTATGTTGTCATGTG 60.023 41.667 19.93 0.00 35.70 3.21
3636 5027 3.888323 TGCAGGTTTATGTTGTCATGTGT 59.112 39.130 0.00 0.00 35.70 3.72
3637 5028 4.229096 GCAGGTTTATGTTGTCATGTGTG 58.771 43.478 0.00 0.00 35.70 3.82
3638 5029 4.261572 GCAGGTTTATGTTGTCATGTGTGT 60.262 41.667 0.00 0.00 35.70 3.72
3639 5030 5.451908 CAGGTTTATGTTGTCATGTGTGTC 58.548 41.667 0.00 0.00 35.70 3.67
3640 5031 5.239306 CAGGTTTATGTTGTCATGTGTGTCT 59.761 40.000 0.00 0.00 35.70 3.41
3641 5032 6.426633 CAGGTTTATGTTGTCATGTGTGTCTA 59.573 38.462 0.00 0.00 35.70 2.59
3642 5033 6.650807 AGGTTTATGTTGTCATGTGTGTCTAG 59.349 38.462 0.00 0.00 35.70 2.43
3643 5034 6.649141 GGTTTATGTTGTCATGTGTGTCTAGA 59.351 38.462 0.00 0.00 35.70 2.43
3644 5035 7.334421 GGTTTATGTTGTCATGTGTGTCTAGAT 59.666 37.037 0.00 0.00 35.70 1.98
3645 5036 7.832503 TTATGTTGTCATGTGTGTCTAGATG 57.167 36.000 0.00 0.00 35.70 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 4.847516 TCGATTCGACGCCGCTGG 62.848 66.667 4.29 0.00 35.37 4.85
50 51 0.644331 CTGCTGCTTCAGTCGATTCG 59.356 55.000 0.00 0.00 33.43 3.34
57 58 2.358003 GACCGCTGCTGCTTCAGT 60.358 61.111 14.03 5.66 36.49 3.41
67 68 2.014093 GAAGACGAATGCGACCGCTG 62.014 60.000 15.61 5.63 42.51 5.18
75 76 2.347755 GGGTACGAAAGAAGACGAATGC 59.652 50.000 0.00 0.00 0.00 3.56
77 78 3.242549 GGGGTACGAAAGAAGACGAAT 57.757 47.619 0.00 0.00 0.00 3.34
92 93 1.757118 CTCAGCAGATTCTTCGGGGTA 59.243 52.381 0.00 0.00 0.00 3.69
110 111 1.284408 CCGCTGTAGCTCGATCCTC 59.716 63.158 0.00 0.00 39.32 3.71
117 118 3.188786 CGGTTGCCGCTGTAGCTC 61.189 66.667 0.00 0.00 41.17 4.09
130 131 0.320508 GTTCTTCTCGAAGCCCGGTT 60.321 55.000 0.00 0.00 38.28 4.44
131 132 1.292541 GTTCTTCTCGAAGCCCGGT 59.707 57.895 0.00 0.00 38.28 5.28
135 136 1.071567 CCGACGTTCTTCTCGAAGCC 61.072 60.000 1.81 0.00 38.28 4.35
145 146 4.421479 CTCAGCCGCCGACGTTCT 62.421 66.667 0.00 0.00 37.70 3.01
189 190 1.061131 CGCCACATTTGAAGCTAGACG 59.939 52.381 0.00 0.00 0.00 4.18
211 212 1.040893 TTGCCCGATTCGAGCTCCTA 61.041 55.000 13.77 0.00 0.00 2.94
212 213 1.690219 ATTGCCCGATTCGAGCTCCT 61.690 55.000 13.77 0.00 0.00 3.69
245 271 2.432628 GGTTCTCACACCGCTCCG 60.433 66.667 0.00 0.00 0.00 4.63
253 279 2.688507 GCTCGATTTGAGGTTCTCACA 58.311 47.619 3.09 0.00 45.38 3.58
265 291 1.062587 CGCTTTTCCATCGCTCGATTT 59.937 47.619 1.55 0.00 31.62 2.17
271 297 2.438434 CCCCGCTTTTCCATCGCT 60.438 61.111 0.00 0.00 0.00 4.93
293 319 4.735132 TCGCACACCCGCTGCTAC 62.735 66.667 0.00 0.00 32.03 3.58
294 320 4.435436 CTCGCACACCCGCTGCTA 62.435 66.667 0.00 0.00 32.03 3.49
300 326 3.047877 GTTTCCCTCGCACACCCG 61.048 66.667 0.00 0.00 0.00 5.28
301 327 2.671963 GGTTTCCCTCGCACACCC 60.672 66.667 0.00 0.00 0.00 4.61
302 328 3.047877 CGGTTTCCCTCGCACACC 61.048 66.667 0.00 0.00 0.00 4.16
303 329 3.047877 CCGGTTTCCCTCGCACAC 61.048 66.667 0.00 0.00 0.00 3.82
304 330 4.323477 CCCGGTTTCCCTCGCACA 62.323 66.667 0.00 0.00 0.00 4.57
369 395 3.899700 CTATTTTGCCGCCCCGCC 61.900 66.667 0.00 0.00 0.00 6.13
370 396 4.569023 GCTATTTTGCCGCCCCGC 62.569 66.667 0.00 0.00 0.00 6.13
371 397 4.250431 CGCTATTTTGCCGCCCCG 62.250 66.667 0.00 0.00 0.00 5.73
372 398 3.899700 CCGCTATTTTGCCGCCCC 61.900 66.667 0.00 0.00 0.00 5.80
373 399 4.569023 GCCGCTATTTTGCCGCCC 62.569 66.667 0.00 0.00 32.55 6.13
374 400 4.569023 GGCCGCTATTTTGCCGCC 62.569 66.667 3.48 3.48 46.29 6.13
377 403 0.102300 AAATCGGCCGCTATTTTGCC 59.898 50.000 23.51 0.00 41.85 4.52
378 404 1.852280 GAAAATCGGCCGCTATTTTGC 59.148 47.619 30.94 21.32 35.87 3.68
379 405 3.108144 CTGAAAATCGGCCGCTATTTTG 58.892 45.455 30.94 19.07 35.87 2.44
380 406 2.099098 CCTGAAAATCGGCCGCTATTTT 59.901 45.455 27.96 27.96 37.85 1.82
381 407 1.676006 CCTGAAAATCGGCCGCTATTT 59.324 47.619 23.51 19.40 0.00 1.40
382 408 1.308998 CCTGAAAATCGGCCGCTATT 58.691 50.000 23.51 13.83 0.00 1.73
383 409 0.535102 CCCTGAAAATCGGCCGCTAT 60.535 55.000 23.51 6.95 0.00 2.97
384 410 1.153249 CCCTGAAAATCGGCCGCTA 60.153 57.895 23.51 4.04 0.00 4.26
385 411 2.438434 CCCTGAAAATCGGCCGCT 60.438 61.111 23.51 8.48 0.00 5.52
386 412 3.518068 CCCCTGAAAATCGGCCGC 61.518 66.667 23.51 6.50 0.00 6.53
387 413 2.828549 CCCCCTGAAAATCGGCCG 60.829 66.667 22.12 22.12 0.00 6.13
388 414 1.453928 CTCCCCCTGAAAATCGGCC 60.454 63.158 0.00 0.00 0.00 6.13
389 415 1.453928 CCTCCCCCTGAAAATCGGC 60.454 63.158 0.00 0.00 0.00 5.54
390 416 1.227383 CCCTCCCCCTGAAAATCGG 59.773 63.158 0.00 0.00 0.00 4.18
391 417 0.394352 CACCCTCCCCCTGAAAATCG 60.394 60.000 0.00 0.00 0.00 3.34
392 418 0.999712 TCACCCTCCCCCTGAAAATC 59.000 55.000 0.00 0.00 0.00 2.17
393 419 1.359130 CTTCACCCTCCCCCTGAAAAT 59.641 52.381 0.00 0.00 0.00 1.82
394 420 0.777446 CTTCACCCTCCCCCTGAAAA 59.223 55.000 0.00 0.00 0.00 2.29
395 421 1.140134 CCTTCACCCTCCCCCTGAAA 61.140 60.000 0.00 0.00 0.00 2.69
396 422 1.541368 CCTTCACCCTCCCCCTGAA 60.541 63.158 0.00 0.00 0.00 3.02
397 423 2.124996 CCTTCACCCTCCCCCTGA 59.875 66.667 0.00 0.00 0.00 3.86
398 424 3.732849 GCCTTCACCCTCCCCCTG 61.733 72.222 0.00 0.00 0.00 4.45
431 457 4.154347 CTCCACTCCCCTCGCTGC 62.154 72.222 0.00 0.00 0.00 5.25
432 458 2.363018 TCTCCACTCCCCTCGCTG 60.363 66.667 0.00 0.00 0.00 5.18
433 459 2.043450 CTCTCCACTCCCCTCGCT 60.043 66.667 0.00 0.00 0.00 4.93
434 460 3.151022 CCTCTCCACTCCCCTCGC 61.151 72.222 0.00 0.00 0.00 5.03
435 461 3.151022 GCCTCTCCACTCCCCTCG 61.151 72.222 0.00 0.00 0.00 4.63
436 462 2.063378 CAGCCTCTCCACTCCCCTC 61.063 68.421 0.00 0.00 0.00 4.30
437 463 2.040278 CAGCCTCTCCACTCCCCT 59.960 66.667 0.00 0.00 0.00 4.79
438 464 2.905676 ATCCAGCCTCTCCACTCCCC 62.906 65.000 0.00 0.00 0.00 4.81
439 465 1.383803 ATCCAGCCTCTCCACTCCC 60.384 63.158 0.00 0.00 0.00 4.30
440 466 0.398381 AGATCCAGCCTCTCCACTCC 60.398 60.000 0.00 0.00 0.00 3.85
441 467 0.752054 CAGATCCAGCCTCTCCACTC 59.248 60.000 0.00 0.00 0.00 3.51
442 468 0.690411 CCAGATCCAGCCTCTCCACT 60.690 60.000 0.00 0.00 0.00 4.00
443 469 0.980231 ACCAGATCCAGCCTCTCCAC 60.980 60.000 0.00 0.00 0.00 4.02
444 470 0.979709 CACCAGATCCAGCCTCTCCA 60.980 60.000 0.00 0.00 0.00 3.86
445 471 0.689080 TCACCAGATCCAGCCTCTCC 60.689 60.000 0.00 0.00 0.00 3.71
446 472 0.463620 GTCACCAGATCCAGCCTCTC 59.536 60.000 0.00 0.00 0.00 3.20
447 473 1.326213 CGTCACCAGATCCAGCCTCT 61.326 60.000 0.00 0.00 0.00 3.69
448 474 1.142748 CGTCACCAGATCCAGCCTC 59.857 63.158 0.00 0.00 0.00 4.70
449 475 2.362369 CCGTCACCAGATCCAGCCT 61.362 63.158 0.00 0.00 0.00 4.58
450 476 2.187946 CCGTCACCAGATCCAGCC 59.812 66.667 0.00 0.00 0.00 4.85
451 477 2.512515 GCCGTCACCAGATCCAGC 60.513 66.667 0.00 0.00 0.00 4.85
452 478 2.202797 CGCCGTCACCAGATCCAG 60.203 66.667 0.00 0.00 0.00 3.86
453 479 3.770040 CCGCCGTCACCAGATCCA 61.770 66.667 0.00 0.00 0.00 3.41
454 480 4.530857 CCCGCCGTCACCAGATCC 62.531 72.222 0.00 0.00 0.00 3.36
455 481 4.530857 CCCCGCCGTCACCAGATC 62.531 72.222 0.00 0.00 0.00 2.75
517 543 4.722700 ACCACCTCCACGCCATGC 62.723 66.667 0.00 0.00 0.00 4.06
518 544 2.034066 AACCACCTCCACGCCATG 59.966 61.111 0.00 0.00 0.00 3.66
519 545 2.034066 CAACCACCTCCACGCCAT 59.966 61.111 0.00 0.00 0.00 4.40
520 546 4.947147 GCAACCACCTCCACGCCA 62.947 66.667 0.00 0.00 0.00 5.69
523 549 3.345808 CACGCAACCACCTCCACG 61.346 66.667 0.00 0.00 0.00 4.94
524 550 2.386064 TACCACGCAACCACCTCCAC 62.386 60.000 0.00 0.00 0.00 4.02
525 551 2.107041 CTACCACGCAACCACCTCCA 62.107 60.000 0.00 0.00 0.00 3.86
526 552 1.375523 CTACCACGCAACCACCTCC 60.376 63.158 0.00 0.00 0.00 4.30
527 553 1.375523 CCTACCACGCAACCACCTC 60.376 63.158 0.00 0.00 0.00 3.85
528 554 1.827399 CTCCTACCACGCAACCACCT 61.827 60.000 0.00 0.00 0.00 4.00
529 555 1.375523 CTCCTACCACGCAACCACC 60.376 63.158 0.00 0.00 0.00 4.61
530 556 0.034337 TTCTCCTACCACGCAACCAC 59.966 55.000 0.00 0.00 0.00 4.16
531 557 0.320374 CTTCTCCTACCACGCAACCA 59.680 55.000 0.00 0.00 0.00 3.67
532 558 0.391263 CCTTCTCCTACCACGCAACC 60.391 60.000 0.00 0.00 0.00 3.77
533 559 0.391263 CCCTTCTCCTACCACGCAAC 60.391 60.000 0.00 0.00 0.00 4.17
534 560 1.550130 CCCCTTCTCCTACCACGCAA 61.550 60.000 0.00 0.00 0.00 4.85
535 561 1.987855 CCCCTTCTCCTACCACGCA 60.988 63.158 0.00 0.00 0.00 5.24
536 562 1.677637 CTCCCCTTCTCCTACCACGC 61.678 65.000 0.00 0.00 0.00 5.34
537 563 1.043673 CCTCCCCTTCTCCTACCACG 61.044 65.000 0.00 0.00 0.00 4.94
538 564 0.691413 CCCTCCCCTTCTCCTACCAC 60.691 65.000 0.00 0.00 0.00 4.16
539 565 0.858598 TCCCTCCCCTTCTCCTACCA 60.859 60.000 0.00 0.00 0.00 3.25
540 566 0.342313 TTCCCTCCCCTTCTCCTACC 59.658 60.000 0.00 0.00 0.00 3.18
541 567 2.120312 CTTTCCCTCCCCTTCTCCTAC 58.880 57.143 0.00 0.00 0.00 3.18
542 568 1.728701 ACTTTCCCTCCCCTTCTCCTA 59.271 52.381 0.00 0.00 0.00 2.94
543 569 0.498685 ACTTTCCCTCCCCTTCTCCT 59.501 55.000 0.00 0.00 0.00 3.69
544 570 1.004862 CAACTTTCCCTCCCCTTCTCC 59.995 57.143 0.00 0.00 0.00 3.71
545 571 1.705745 ACAACTTTCCCTCCCCTTCTC 59.294 52.381 0.00 0.00 0.00 2.87
546 572 1.425448 CACAACTTTCCCTCCCCTTCT 59.575 52.381 0.00 0.00 0.00 2.85
547 573 1.547901 CCACAACTTTCCCTCCCCTTC 60.548 57.143 0.00 0.00 0.00 3.46
548 574 0.482887 CCACAACTTTCCCTCCCCTT 59.517 55.000 0.00 0.00 0.00 3.95
549 575 0.701310 ACCACAACTTTCCCTCCCCT 60.701 55.000 0.00 0.00 0.00 4.79
550 576 0.251209 GACCACAACTTTCCCTCCCC 60.251 60.000 0.00 0.00 0.00 4.81
551 577 0.605589 CGACCACAACTTTCCCTCCC 60.606 60.000 0.00 0.00 0.00 4.30
552 578 0.605589 CCGACCACAACTTTCCCTCC 60.606 60.000 0.00 0.00 0.00 4.30
553 579 0.108019 ACCGACCACAACTTTCCCTC 59.892 55.000 0.00 0.00 0.00 4.30
554 580 0.549469 AACCGACCACAACTTTCCCT 59.451 50.000 0.00 0.00 0.00 4.20
555 581 0.666374 CAACCGACCACAACTTTCCC 59.334 55.000 0.00 0.00 0.00 3.97
556 582 0.666374 CCAACCGACCACAACTTTCC 59.334 55.000 0.00 0.00 0.00 3.13
557 583 0.030235 GCCAACCGACCACAACTTTC 59.970 55.000 0.00 0.00 0.00 2.62
558 584 1.720694 CGCCAACCGACCACAACTTT 61.721 55.000 0.00 0.00 40.02 2.66
559 585 2.184167 CGCCAACCGACCACAACTT 61.184 57.895 0.00 0.00 40.02 2.66
560 586 2.590575 CGCCAACCGACCACAACT 60.591 61.111 0.00 0.00 40.02 3.16
561 587 4.322385 GCGCCAACCGACCACAAC 62.322 66.667 0.00 0.00 40.02 3.32
562 588 4.555709 AGCGCCAACCGACCACAA 62.556 61.111 2.29 0.00 40.02 3.33
563 589 4.980805 GAGCGCCAACCGACCACA 62.981 66.667 2.29 0.00 40.02 4.17
567 593 3.332493 TAGACGAGCGCCAACCGAC 62.332 63.158 2.29 3.56 40.02 4.79
568 594 3.057548 TAGACGAGCGCCAACCGA 61.058 61.111 2.29 0.00 40.02 4.69
569 595 2.879462 GTAGACGAGCGCCAACCG 60.879 66.667 2.29 5.59 40.75 4.44
570 596 2.508663 GGTAGACGAGCGCCAACC 60.509 66.667 2.29 0.00 0.00 3.77
581 607 7.141363 TCTTCTAGTGTTGTAAAACGGTAGAC 58.859 38.462 6.47 0.00 0.00 2.59
582 608 7.275888 TCTTCTAGTGTTGTAAAACGGTAGA 57.724 36.000 3.75 3.75 0.00 2.59
583 609 7.063074 CCATCTTCTAGTGTTGTAAAACGGTAG 59.937 40.741 0.00 0.00 0.00 3.18
584 610 6.869913 CCATCTTCTAGTGTTGTAAAACGGTA 59.130 38.462 0.00 0.00 0.00 4.02
585 611 5.699458 CCATCTTCTAGTGTTGTAAAACGGT 59.301 40.000 0.00 0.00 0.00 4.83
586 612 5.929992 TCCATCTTCTAGTGTTGTAAAACGG 59.070 40.000 0.00 0.00 0.00 4.44
587 613 6.866770 TCTCCATCTTCTAGTGTTGTAAAACG 59.133 38.462 0.00 0.00 0.00 3.60
588 614 8.660373 CATCTCCATCTTCTAGTGTTGTAAAAC 58.340 37.037 0.00 0.00 0.00 2.43
589 615 7.334421 GCATCTCCATCTTCTAGTGTTGTAAAA 59.666 37.037 0.00 0.00 0.00 1.52
590 616 6.818644 GCATCTCCATCTTCTAGTGTTGTAAA 59.181 38.462 0.00 0.00 0.00 2.01
591 617 6.070824 TGCATCTCCATCTTCTAGTGTTGTAA 60.071 38.462 0.00 0.00 0.00 2.41
592 618 5.422012 TGCATCTCCATCTTCTAGTGTTGTA 59.578 40.000 0.00 0.00 0.00 2.41
593 619 4.223700 TGCATCTCCATCTTCTAGTGTTGT 59.776 41.667 0.00 0.00 0.00 3.32
594 620 4.763073 TGCATCTCCATCTTCTAGTGTTG 58.237 43.478 0.00 0.00 0.00 3.33
595 621 5.426689 TTGCATCTCCATCTTCTAGTGTT 57.573 39.130 0.00 0.00 0.00 3.32
596 622 5.426689 TTTGCATCTCCATCTTCTAGTGT 57.573 39.130 0.00 0.00 0.00 3.55
597 623 6.939132 AATTTGCATCTCCATCTTCTAGTG 57.061 37.500 0.00 0.00 0.00 2.74
598 624 6.709846 GCTAATTTGCATCTCCATCTTCTAGT 59.290 38.462 7.02 0.00 0.00 2.57
599 625 6.128607 CGCTAATTTGCATCTCCATCTTCTAG 60.129 42.308 12.31 0.00 0.00 2.43
600 626 5.698089 CGCTAATTTGCATCTCCATCTTCTA 59.302 40.000 12.31 0.00 0.00 2.10
601 627 4.514441 CGCTAATTTGCATCTCCATCTTCT 59.486 41.667 12.31 0.00 0.00 2.85
602 628 4.274459 ACGCTAATTTGCATCTCCATCTTC 59.726 41.667 12.31 0.00 0.00 2.87
603 629 4.202441 ACGCTAATTTGCATCTCCATCTT 58.798 39.130 12.31 0.00 0.00 2.40
604 630 3.813443 ACGCTAATTTGCATCTCCATCT 58.187 40.909 12.31 0.00 0.00 2.90
605 631 4.201950 ACAACGCTAATTTGCATCTCCATC 60.202 41.667 12.31 0.00 0.00 3.51
606 632 3.696051 ACAACGCTAATTTGCATCTCCAT 59.304 39.130 12.31 0.00 0.00 3.41
607 633 3.081061 ACAACGCTAATTTGCATCTCCA 58.919 40.909 12.31 0.00 0.00 3.86
608 634 3.764885 ACAACGCTAATTTGCATCTCC 57.235 42.857 12.31 0.00 0.00 3.71
609 635 7.740519 AAAATACAACGCTAATTTGCATCTC 57.259 32.000 12.31 0.00 0.00 2.75
610 636 8.240682 TGTAAAATACAACGCTAATTTGCATCT 58.759 29.630 12.31 0.00 35.38 2.90
611 637 8.388319 TGTAAAATACAACGCTAATTTGCATC 57.612 30.769 12.31 0.00 35.38 3.91
612 638 8.925161 ATGTAAAATACAACGCTAATTTGCAT 57.075 26.923 12.31 0.00 42.76 3.96
613 639 8.023706 TGATGTAAAATACAACGCTAATTTGCA 58.976 29.630 12.31 0.00 42.76 4.08
614 640 8.311120 GTGATGTAAAATACAACGCTAATTTGC 58.689 33.333 1.42 1.42 42.76 3.68
615 641 9.554724 AGTGATGTAAAATACAACGCTAATTTG 57.445 29.630 10.80 0.00 46.14 2.32
617 643 9.554724 CAAGTGATGTAAAATACAACGCTAATT 57.445 29.630 12.30 0.00 46.90 1.40
618 644 8.941977 TCAAGTGATGTAAAATACAACGCTAAT 58.058 29.630 12.30 0.00 46.90 1.73
619 645 8.312896 TCAAGTGATGTAAAATACAACGCTAA 57.687 30.769 12.30 4.27 46.90 3.09
620 646 7.892778 TCAAGTGATGTAAAATACAACGCTA 57.107 32.000 12.30 0.00 46.90 4.26
622 648 6.032460 GCTTCAAGTGATGTAAAATACAACGC 59.968 38.462 3.91 3.91 42.76 4.84
623 649 7.075121 TGCTTCAAGTGATGTAAAATACAACG 58.925 34.615 0.00 0.00 42.76 4.10
624 650 8.853345 CATGCTTCAAGTGATGTAAAATACAAC 58.147 33.333 0.00 0.00 42.76 3.32
625 651 8.575589 ACATGCTTCAAGTGATGTAAAATACAA 58.424 29.630 3.11 0.00 42.76 2.41
626 652 8.022550 CACATGCTTCAAGTGATGTAAAATACA 58.977 33.333 4.41 0.00 43.80 2.29
627 653 8.236586 TCACATGCTTCAAGTGATGTAAAATAC 58.763 33.333 4.41 0.00 37.20 1.89
628 654 8.334263 TCACATGCTTCAAGTGATGTAAAATA 57.666 30.769 4.41 0.00 37.20 1.40
629 655 7.218228 TCACATGCTTCAAGTGATGTAAAAT 57.782 32.000 4.41 0.00 37.20 1.82
630 656 6.631971 TCACATGCTTCAAGTGATGTAAAA 57.368 33.333 4.41 0.00 37.20 1.52
631 657 6.822667 ATCACATGCTTCAAGTGATGTAAA 57.177 33.333 14.41 1.37 46.37 2.01
637 663 5.706833 ACATTACATCACATGCTTCAAGTGA 59.293 36.000 7.23 7.23 44.18 3.41
638 664 5.946298 ACATTACATCACATGCTTCAAGTG 58.054 37.500 0.00 0.00 34.86 3.16
639 665 6.579666 AACATTACATCACATGCTTCAAGT 57.420 33.333 0.00 0.00 0.00 3.16
640 666 7.595875 TGAAAACATTACATCACATGCTTCAAG 59.404 33.333 0.00 0.00 29.25 3.02
641 667 7.432059 TGAAAACATTACATCACATGCTTCAA 58.568 30.769 0.00 0.00 29.25 2.69
642 668 6.979465 TGAAAACATTACATCACATGCTTCA 58.021 32.000 0.00 0.00 0.00 3.02
643 669 9.740239 ATATGAAAACATTACATCACATGCTTC 57.260 29.630 0.00 0.00 0.00 3.86
644 670 9.740239 GATATGAAAACATTACATCACATGCTT 57.260 29.630 0.00 0.00 0.00 3.91
645 671 9.128404 AGATATGAAAACATTACATCACATGCT 57.872 29.630 0.00 0.00 0.00 3.79
667 693 9.131791 TGCTCTGTCTAACACATAATGTAGATA 57.868 33.333 0.00 0.00 42.31 1.98
668 694 7.923344 GTGCTCTGTCTAACACATAATGTAGAT 59.077 37.037 0.00 0.00 42.31 1.98
669 695 7.258441 GTGCTCTGTCTAACACATAATGTAGA 58.742 38.462 0.00 0.00 42.31 2.59
670 696 6.197282 CGTGCTCTGTCTAACACATAATGTAG 59.803 42.308 0.00 0.00 42.31 2.74
671 697 6.033966 CGTGCTCTGTCTAACACATAATGTA 58.966 40.000 0.00 0.00 42.31 2.29
672 698 4.864806 CGTGCTCTGTCTAACACATAATGT 59.135 41.667 0.00 0.00 46.42 2.71
673 699 4.864806 ACGTGCTCTGTCTAACACATAATG 59.135 41.667 0.00 0.00 33.23 1.90
674 700 4.864806 CACGTGCTCTGTCTAACACATAAT 59.135 41.667 0.82 0.00 33.23 1.28
675 701 4.022676 TCACGTGCTCTGTCTAACACATAA 60.023 41.667 11.67 0.00 33.23 1.90
676 702 3.504520 TCACGTGCTCTGTCTAACACATA 59.495 43.478 11.67 0.00 33.23 2.29
677 703 2.296190 TCACGTGCTCTGTCTAACACAT 59.704 45.455 11.67 0.00 33.23 3.21
678 704 1.679153 TCACGTGCTCTGTCTAACACA 59.321 47.619 11.67 0.00 33.23 3.72
679 705 2.417339 TCACGTGCTCTGTCTAACAC 57.583 50.000 11.67 0.00 0.00 3.32
680 706 2.296190 ACATCACGTGCTCTGTCTAACA 59.704 45.455 11.67 0.00 0.00 2.41
681 707 2.947852 ACATCACGTGCTCTGTCTAAC 58.052 47.619 11.67 0.00 0.00 2.34
682 708 4.983671 ATACATCACGTGCTCTGTCTAA 57.016 40.909 11.67 0.39 0.00 2.10
683 709 4.983671 AATACATCACGTGCTCTGTCTA 57.016 40.909 11.67 1.08 0.00 2.59
684 710 3.876274 AATACATCACGTGCTCTGTCT 57.124 42.857 11.67 4.42 0.00 3.41
685 711 4.928661 AAAATACATCACGTGCTCTGTC 57.071 40.909 11.67 0.00 0.00 3.51
740 766 7.455641 TTTTTACATATCTCCGAGCCAAAAA 57.544 32.000 0.00 0.00 0.00 1.94
741 767 7.416213 CCATTTTTACATATCTCCGAGCCAAAA 60.416 37.037 0.00 0.00 0.00 2.44
742 768 6.039270 CCATTTTTACATATCTCCGAGCCAAA 59.961 38.462 0.00 0.00 0.00 3.28
743 769 5.530915 CCATTTTTACATATCTCCGAGCCAA 59.469 40.000 0.00 0.00 0.00 4.52
744 770 5.063204 CCATTTTTACATATCTCCGAGCCA 58.937 41.667 0.00 0.00 0.00 4.75
745 771 4.455877 CCCATTTTTACATATCTCCGAGCC 59.544 45.833 0.00 0.00 0.00 4.70
746 772 5.063880 ACCCATTTTTACATATCTCCGAGC 58.936 41.667 0.00 0.00 0.00 5.03
747 773 8.848474 ATAACCCATTTTTACATATCTCCGAG 57.152 34.615 0.00 0.00 0.00 4.63
748 774 9.635404 AAATAACCCATTTTTACATATCTCCGA 57.365 29.630 0.00 0.00 32.74 4.55
773 799 8.618240 TCTGGGGTAGAAGATGTAGATAAAAA 57.382 34.615 0.00 0.00 30.84 1.94
774 800 8.651389 CATCTGGGGTAGAAGATGTAGATAAAA 58.349 37.037 4.81 0.00 43.14 1.52
775 801 8.195165 CATCTGGGGTAGAAGATGTAGATAAA 57.805 38.462 4.81 0.00 43.14 1.40
776 802 7.782897 CATCTGGGGTAGAAGATGTAGATAA 57.217 40.000 4.81 0.00 43.14 1.75
794 820 0.747283 GCAGGGCTCAAGACATCTGG 60.747 60.000 0.00 0.00 0.00 3.86
813 839 4.115199 CCTCCTTTCCCCAGGCCG 62.115 72.222 0.00 0.00 33.35 6.13
952 980 1.134491 GGTGGGAGGATAAGGACAACG 60.134 57.143 0.00 0.00 0.00 4.10
953 981 1.134491 CGGTGGGAGGATAAGGACAAC 60.134 57.143 0.00 0.00 0.00 3.32
988 1027 1.268352 GCAAGTGAGAGAGTGTCGAGT 59.732 52.381 0.00 0.00 0.00 4.18
1178 1226 3.672295 GAAGGAGAGCGTGGGCCAG 62.672 68.421 6.40 1.95 41.24 4.85
1218 1266 1.448540 CCTTCGTGAGCGCCTTCAT 60.449 57.895 2.29 0.00 38.14 2.57
1220 1268 1.807573 CTCCTTCGTGAGCGCCTTC 60.808 63.158 2.29 0.00 38.14 3.46
1232 1280 2.892425 CCGCGCATGTCCTCCTTC 60.892 66.667 8.75 0.00 0.00 3.46
1319 1367 1.008309 GTTCGCCGGAGCTAGCTAG 60.008 63.158 19.38 16.84 36.60 3.42
1321 1369 4.194720 CGTTCGCCGGAGCTAGCT 62.195 66.667 19.45 19.45 36.60 3.32
1333 1387 1.005975 GCAATCCTCGTCAATCGTTCG 60.006 52.381 0.00 0.00 40.80 3.95
1339 1393 2.880890 GCCATAAGCAATCCTCGTCAAT 59.119 45.455 0.00 0.00 42.97 2.57
1341 1395 1.806247 CGCCATAAGCAATCCTCGTCA 60.806 52.381 0.00 0.00 44.04 4.35
1342 1396 0.861837 CGCCATAAGCAATCCTCGTC 59.138 55.000 0.00 0.00 44.04 4.20
1343 1397 0.178068 ACGCCATAAGCAATCCTCGT 59.822 50.000 0.00 0.00 44.04 4.18
1344 1398 0.583438 CACGCCATAAGCAATCCTCG 59.417 55.000 0.00 0.00 44.04 4.63
1346 1400 1.382522 CACACGCCATAAGCAATCCT 58.617 50.000 0.00 0.00 44.04 3.24
1602 1661 8.253810 TCAGATACTCAGATTTACCACTTTGAG 58.746 37.037 0.00 0.00 38.34 3.02
1636 1695 3.005554 GTGTTCACCAGATGATCCACTG 58.994 50.000 8.64 8.64 37.11 3.66
1879 1938 4.314740 TCACTGGTGGTACAATTTTTGC 57.685 40.909 0.00 0.00 44.16 3.68
1880 1939 6.207417 AGAGATCACTGGTGGTACAATTTTTG 59.793 38.462 0.00 0.00 44.16 2.44
1882 1941 5.880901 AGAGATCACTGGTGGTACAATTTT 58.119 37.500 0.00 0.00 44.16 1.82
1883 1942 5.013079 TGAGAGATCACTGGTGGTACAATTT 59.987 40.000 0.00 0.00 44.16 1.82
1911 1970 1.806542 AGAGCGCACAACGATTGATTT 59.193 42.857 11.47 0.00 43.08 2.17
1967 2026 1.328069 CAGCGTCTCGTAGAAGTCGAT 59.672 52.381 0.00 0.00 36.73 3.59
2585 2696 7.284261 CAGAATCAGTTCACAGATAGGAGTAGA 59.716 40.741 0.00 0.00 36.79 2.59
2586 2697 7.284261 TCAGAATCAGTTCACAGATAGGAGTAG 59.716 40.741 0.00 0.00 36.79 2.57
2587 2698 7.119387 TCAGAATCAGTTCACAGATAGGAGTA 58.881 38.462 0.00 0.00 36.79 2.59
2588 2699 5.954752 TCAGAATCAGTTCACAGATAGGAGT 59.045 40.000 0.00 0.00 36.79 3.85
2589 2700 6.462552 TCAGAATCAGTTCACAGATAGGAG 57.537 41.667 0.00 0.00 36.79 3.69
2590 2701 6.183360 CCATCAGAATCAGTTCACAGATAGGA 60.183 42.308 0.00 0.00 36.79 2.94
2591 2702 5.990386 CCATCAGAATCAGTTCACAGATAGG 59.010 44.000 0.00 0.00 36.79 2.57
2598 2709 3.679389 ACCACCATCAGAATCAGTTCAC 58.321 45.455 0.00 0.00 36.79 3.18
2611 2722 6.165577 AGCATTTATTTGTTGAACCACCATC 58.834 36.000 0.00 0.00 0.00 3.51
2618 2729 8.755696 TTACATGGAGCATTTATTTGTTGAAC 57.244 30.769 0.00 0.00 0.00 3.18
2642 2753 5.356470 GCATGCATAAGGAGTTCTTCTTCTT 59.644 40.000 14.21 0.00 43.72 2.52
2643 2754 4.880696 GCATGCATAAGGAGTTCTTCTTCT 59.119 41.667 14.21 0.00 36.93 2.85
2644 2755 4.036144 GGCATGCATAAGGAGTTCTTCTTC 59.964 45.833 21.36 0.00 36.93 2.87
2656 2767 5.007430 CACTTTCAGTCTAGGCATGCATAAG 59.993 44.000 21.36 13.16 0.00 1.73
2707 2836 0.110147 CGTTTGGCAAATCCGCGTAA 60.110 50.000 16.74 0.00 37.80 3.18
2745 2874 1.002087 CCAACAGCCTCTTTACCGTCT 59.998 52.381 0.00 0.00 0.00 4.18
2751 2880 4.041075 TGACATGTACCAACAGCCTCTTTA 59.959 41.667 0.00 0.00 39.49 1.85
2778 2907 2.715749 TCCGAATGAACCTGCATGAT 57.284 45.000 0.00 0.00 0.00 2.45
2785 2914 7.362920 CCATACAATTTTCTTCCGAATGAACCT 60.363 37.037 0.00 0.00 0.00 3.50
2794 2923 4.096382 CCTGTCCCATACAATTTTCTTCCG 59.904 45.833 0.00 0.00 37.74 4.30
2815 2944 1.152440 CGGGAGACTATGAGGCCCT 60.152 63.158 0.00 0.00 36.62 5.19
2837 2966 0.627986 AAAATCTGGAGAGGGGCCTG 59.372 55.000 0.84 0.00 0.00 4.85
2984 3113 1.259609 TCGGTAGCTTCCTTTCGGAA 58.740 50.000 7.87 0.00 46.90 4.30
2985 3114 1.481871 ATCGGTAGCTTCCTTTCGGA 58.518 50.000 7.87 0.00 37.60 4.55
2986 3115 2.311124 AATCGGTAGCTTCCTTTCGG 57.689 50.000 7.87 0.00 0.00 4.30
2987 3116 4.872664 AGATAATCGGTAGCTTCCTTTCG 58.127 43.478 7.87 0.00 0.00 3.46
3000 3133 1.374758 GCAGCGGGGAGATAATCGG 60.375 63.158 0.00 0.00 0.00 4.18
3005 3138 1.149854 TCGTAGCAGCGGGGAGATA 59.850 57.895 0.33 0.00 0.00 1.98
3014 3147 2.184579 GGGAGTGGTCGTAGCAGC 59.815 66.667 0.00 0.00 0.00 5.25
3015 3148 1.513158 CAGGGAGTGGTCGTAGCAG 59.487 63.158 0.00 0.00 0.00 4.24
3016 3149 2.646175 GCAGGGAGTGGTCGTAGCA 61.646 63.158 0.00 0.00 0.00 3.49
3017 3150 2.184579 GCAGGGAGTGGTCGTAGC 59.815 66.667 0.00 0.00 0.00 3.58
3080 3216 2.664436 GGGAAACCGTCGCAGTTCG 61.664 63.158 0.00 0.00 43.64 3.95
3130 3266 1.883732 CTTCTTGCTCTCCGTCGGA 59.116 57.895 14.54 14.54 0.00 4.55
3135 3271 0.164647 CAAACGCTTCTTGCTCTCCG 59.835 55.000 0.00 0.00 40.11 4.63
3185 3323 0.250513 GGAGATGTTTGGCTCTCGGT 59.749 55.000 0.00 0.00 39.04 4.69
3222 3532 2.236146 AGTCATCGCAACCTTGTATGGA 59.764 45.455 0.00 0.00 0.00 3.41
3223 3533 2.352651 CAGTCATCGCAACCTTGTATGG 59.647 50.000 0.00 0.00 0.00 2.74
3225 3535 2.009774 GCAGTCATCGCAACCTTGTAT 58.990 47.619 0.00 0.00 0.00 2.29
3239 4360 2.355837 GACGTTGAGGCGCAGTCA 60.356 61.111 10.83 8.92 34.88 3.41
3243 4364 3.573772 CTCCAGACGTTGAGGCGCA 62.574 63.158 10.83 0.00 34.88 6.09
3278 4399 3.567576 AACCAGAGATAGCGATCATCG 57.432 47.619 9.61 1.50 43.89 3.84
3320 4441 8.450964 GGATACAATACATTACCAATCAATCGG 58.549 37.037 0.00 0.00 0.00 4.18
3356 4477 7.542477 CAGCTGATACGTATTTAAGTCTATGGG 59.458 40.741 8.42 0.00 0.00 4.00
3431 4821 0.627986 AGGCCCCTCTCCAGATTTTG 59.372 55.000 0.00 0.00 0.00 2.44
3495 4886 1.776662 GGCCTTTCCCCCTAATGAAC 58.223 55.000 0.00 0.00 0.00 3.18
3497 4888 0.917333 ACGGCCTTTCCCCCTAATGA 60.917 55.000 0.00 0.00 0.00 2.57
3498 4889 0.751643 CACGGCCTTTCCCCCTAATG 60.752 60.000 0.00 0.00 0.00 1.90
3499 4890 1.613061 CACGGCCTTTCCCCCTAAT 59.387 57.895 0.00 0.00 0.00 1.73
3500 4891 2.608550 CCACGGCCTTTCCCCCTAA 61.609 63.158 0.00 0.00 0.00 2.69
3501 4892 3.012722 CCACGGCCTTTCCCCCTA 61.013 66.667 0.00 0.00 0.00 3.53
3504 4895 4.986708 TTGCCACGGCCTTTCCCC 62.987 66.667 5.42 0.00 41.09 4.81
3505 4896 2.679996 ATTGCCACGGCCTTTCCC 60.680 61.111 5.42 0.00 41.09 3.97
3506 4897 1.815817 AACATTGCCACGGCCTTTCC 61.816 55.000 5.42 0.00 41.09 3.13
3507 4898 0.033366 AAACATTGCCACGGCCTTTC 59.967 50.000 5.42 0.00 41.09 2.62
3508 4899 0.249826 CAAACATTGCCACGGCCTTT 60.250 50.000 5.42 0.00 41.09 3.11
3509 4900 1.367102 CAAACATTGCCACGGCCTT 59.633 52.632 5.42 0.00 41.09 4.35
3510 4901 2.573083 CCAAACATTGCCACGGCCT 61.573 57.895 5.42 0.00 41.09 5.19
3511 4902 2.048316 CCAAACATTGCCACGGCC 60.048 61.111 5.42 0.00 41.09 6.13
3512 4903 0.531753 AAACCAAACATTGCCACGGC 60.532 50.000 0.00 0.00 42.35 5.68
3513 4904 2.294791 TCTAAACCAAACATTGCCACGG 59.705 45.455 0.00 0.00 0.00 4.94
3514 4905 3.564511 CTCTAAACCAAACATTGCCACG 58.435 45.455 0.00 0.00 0.00 4.94
3515 4906 3.005791 AGCTCTAAACCAAACATTGCCAC 59.994 43.478 0.00 0.00 0.00 5.01
3516 4907 3.230134 AGCTCTAAACCAAACATTGCCA 58.770 40.909 0.00 0.00 0.00 4.92
3517 4908 3.942130 AGCTCTAAACCAAACATTGCC 57.058 42.857 0.00 0.00 0.00 4.52
3518 4909 6.528072 GTGATTAGCTCTAAACCAAACATTGC 59.472 38.462 0.00 0.00 0.00 3.56
3519 4910 7.820648 AGTGATTAGCTCTAAACCAAACATTG 58.179 34.615 0.00 0.00 0.00 2.82
3520 4911 9.686683 ATAGTGATTAGCTCTAAACCAAACATT 57.313 29.630 0.00 0.00 0.00 2.71
3521 4912 9.113838 CATAGTGATTAGCTCTAAACCAAACAT 57.886 33.333 0.00 0.00 0.00 2.71
3522 4913 8.100791 ACATAGTGATTAGCTCTAAACCAAACA 58.899 33.333 0.00 0.00 0.00 2.83
3523 4914 8.391106 CACATAGTGATTAGCTCTAAACCAAAC 58.609 37.037 0.00 0.00 35.23 2.93
3524 4915 7.552687 CCACATAGTGATTAGCTCTAAACCAAA 59.447 37.037 0.00 0.00 35.23 3.28
3525 4916 7.047891 CCACATAGTGATTAGCTCTAAACCAA 58.952 38.462 0.00 0.00 35.23 3.67
3526 4917 6.408092 CCCACATAGTGATTAGCTCTAAACCA 60.408 42.308 0.00 0.00 35.23 3.67
3527 4918 5.992217 CCCACATAGTGATTAGCTCTAAACC 59.008 44.000 0.00 0.00 35.23 3.27
3528 4919 5.467063 GCCCACATAGTGATTAGCTCTAAAC 59.533 44.000 0.00 0.00 35.23 2.01
3529 4920 5.130311 TGCCCACATAGTGATTAGCTCTAAA 59.870 40.000 0.00 0.00 35.23 1.85
3530 4921 4.653801 TGCCCACATAGTGATTAGCTCTAA 59.346 41.667 0.00 0.00 35.23 2.10
3531 4922 4.223144 TGCCCACATAGTGATTAGCTCTA 58.777 43.478 0.00 0.00 35.23 2.43
3532 4923 3.041211 TGCCCACATAGTGATTAGCTCT 58.959 45.455 0.00 0.00 35.23 4.09
3533 4924 3.475566 TGCCCACATAGTGATTAGCTC 57.524 47.619 0.00 0.00 35.23 4.09
3534 4925 3.137176 ACATGCCCACATAGTGATTAGCT 59.863 43.478 0.00 0.00 35.23 3.32
3535 4926 3.251729 CACATGCCCACATAGTGATTAGC 59.748 47.826 0.00 0.00 37.43 3.09
3536 4927 4.454678 ACACATGCCCACATAGTGATTAG 58.545 43.478 12.38 0.00 38.05 1.73
3537 4928 4.502105 ACACATGCCCACATAGTGATTA 57.498 40.909 12.38 0.00 38.05 1.75
3538 4929 3.370840 ACACATGCCCACATAGTGATT 57.629 42.857 12.38 0.00 38.05 2.57
3539 4930 3.455910 ACTACACATGCCCACATAGTGAT 59.544 43.478 12.38 4.03 38.05 3.06
3540 4931 2.837591 ACTACACATGCCCACATAGTGA 59.162 45.455 12.38 0.00 38.05 3.41
3541 4932 2.938451 CACTACACATGCCCACATAGTG 59.062 50.000 0.00 0.00 39.33 2.74
3542 4933 2.571653 ACACTACACATGCCCACATAGT 59.428 45.455 0.00 0.00 33.67 2.12
3543 4934 3.266510 ACACTACACATGCCCACATAG 57.733 47.619 0.00 0.00 33.67 2.23
3544 4935 4.828072 TTACACTACACATGCCCACATA 57.172 40.909 0.00 0.00 33.67 2.29
3545 4936 3.712016 TTACACTACACATGCCCACAT 57.288 42.857 0.00 0.00 36.79 3.21
3546 4937 3.244735 ACATTACACTACACATGCCCACA 60.245 43.478 0.00 0.00 0.00 4.17
3547 4938 3.343617 ACATTACACTACACATGCCCAC 58.656 45.455 0.00 0.00 0.00 4.61
3548 4939 3.712016 ACATTACACTACACATGCCCA 57.288 42.857 0.00 0.00 0.00 5.36
3549 4940 5.183228 ACTTACATTACACTACACATGCCC 58.817 41.667 0.00 0.00 0.00 5.36
3550 4941 7.262772 TCTACTTACATTACACTACACATGCC 58.737 38.462 0.00 0.00 0.00 4.40
3551 4942 8.873215 ATCTACTTACATTACACTACACATGC 57.127 34.615 0.00 0.00 0.00 4.06
3553 4944 9.817809 CCAATCTACTTACATTACACTACACAT 57.182 33.333 0.00 0.00 0.00 3.21
3554 4945 9.027202 TCCAATCTACTTACATTACACTACACA 57.973 33.333 0.00 0.00 0.00 3.72
3555 4946 9.298774 GTCCAATCTACTTACATTACACTACAC 57.701 37.037 0.00 0.00 0.00 2.90
3556 4947 9.251440 AGTCCAATCTACTTACATTACACTACA 57.749 33.333 0.00 0.00 0.00 2.74
3557 4948 9.517609 CAGTCCAATCTACTTACATTACACTAC 57.482 37.037 0.00 0.00 0.00 2.73
3558 4949 8.692710 CCAGTCCAATCTACTTACATTACACTA 58.307 37.037 0.00 0.00 0.00 2.74
3559 4950 7.180408 ACCAGTCCAATCTACTTACATTACACT 59.820 37.037 0.00 0.00 0.00 3.55
3560 4951 7.328737 ACCAGTCCAATCTACTTACATTACAC 58.671 38.462 0.00 0.00 0.00 2.90
3561 4952 7.490657 ACCAGTCCAATCTACTTACATTACA 57.509 36.000 0.00 0.00 0.00 2.41
3562 4953 8.258708 AGAACCAGTCCAATCTACTTACATTAC 58.741 37.037 0.00 0.00 0.00 1.89
3563 4954 8.375493 AGAACCAGTCCAATCTACTTACATTA 57.625 34.615 0.00 0.00 0.00 1.90
3564 4955 7.038302 TGAGAACCAGTCCAATCTACTTACATT 60.038 37.037 0.00 0.00 0.00 2.71
3565 4956 6.440647 TGAGAACCAGTCCAATCTACTTACAT 59.559 38.462 0.00 0.00 0.00 2.29
3566 4957 5.778241 TGAGAACCAGTCCAATCTACTTACA 59.222 40.000 0.00 0.00 0.00 2.41
3567 4958 6.282199 TGAGAACCAGTCCAATCTACTTAC 57.718 41.667 0.00 0.00 0.00 2.34
3568 4959 6.928348 TTGAGAACCAGTCCAATCTACTTA 57.072 37.500 0.00 0.00 0.00 2.24
3569 4960 5.825593 TTGAGAACCAGTCCAATCTACTT 57.174 39.130 0.00 0.00 0.00 2.24
3570 4961 5.825593 TTTGAGAACCAGTCCAATCTACT 57.174 39.130 0.00 0.00 0.00 2.57
3571 4962 6.877611 TTTTTGAGAACCAGTCCAATCTAC 57.122 37.500 0.00 0.00 0.00 2.59
3596 4987 4.217118 CCTGCAGTGCAATCTACTCTTTTT 59.783 41.667 20.22 0.00 38.41 1.94
3597 4988 3.755378 CCTGCAGTGCAATCTACTCTTTT 59.245 43.478 20.22 0.00 38.41 2.27
3598 4989 3.244700 ACCTGCAGTGCAATCTACTCTTT 60.245 43.478 20.22 0.00 38.41 2.52
3599 4990 2.304180 ACCTGCAGTGCAATCTACTCTT 59.696 45.455 20.22 0.00 38.41 2.85
3600 4991 1.905215 ACCTGCAGTGCAATCTACTCT 59.095 47.619 20.22 0.00 38.41 3.24
3601 4992 2.393271 ACCTGCAGTGCAATCTACTC 57.607 50.000 20.22 0.00 38.41 2.59
3602 4993 2.867109 AACCTGCAGTGCAATCTACT 57.133 45.000 20.22 0.00 38.41 2.57
3603 4994 4.396166 ACATAAACCTGCAGTGCAATCTAC 59.604 41.667 20.22 0.00 38.41 2.59
3604 4995 4.588899 ACATAAACCTGCAGTGCAATCTA 58.411 39.130 20.22 8.60 38.41 1.98
3605 4996 3.424703 ACATAAACCTGCAGTGCAATCT 58.575 40.909 20.22 6.58 38.41 2.40
3606 4997 3.855689 ACATAAACCTGCAGTGCAATC 57.144 42.857 20.22 0.00 38.41 2.67
3607 4998 3.321682 ACAACATAAACCTGCAGTGCAAT 59.678 39.130 20.22 7.53 38.41 3.56
3608 4999 2.692557 ACAACATAAACCTGCAGTGCAA 59.307 40.909 20.22 3.77 38.41 4.08
3609 5000 2.293122 GACAACATAAACCTGCAGTGCA 59.707 45.455 18.58 18.58 36.92 4.57
3610 5001 2.293122 TGACAACATAAACCTGCAGTGC 59.707 45.455 13.81 8.58 0.00 4.40
3611 5002 4.022935 ACATGACAACATAAACCTGCAGTG 60.023 41.667 13.81 6.33 35.09 3.66
3612 5003 4.022935 CACATGACAACATAAACCTGCAGT 60.023 41.667 13.81 0.00 35.09 4.40
3613 5004 4.022935 ACACATGACAACATAAACCTGCAG 60.023 41.667 6.78 6.78 35.09 4.41
3614 5005 3.888323 ACACATGACAACATAAACCTGCA 59.112 39.130 0.00 0.00 35.09 4.41
3615 5006 4.229096 CACACATGACAACATAAACCTGC 58.771 43.478 0.00 0.00 35.09 4.85
3616 5007 5.239306 AGACACACATGACAACATAAACCTG 59.761 40.000 0.00 0.00 35.09 4.00
3617 5008 5.376625 AGACACACATGACAACATAAACCT 58.623 37.500 0.00 0.00 35.09 3.50
3618 5009 5.689383 AGACACACATGACAACATAAACC 57.311 39.130 0.00 0.00 35.09 3.27
3619 5010 7.652300 TCTAGACACACATGACAACATAAAC 57.348 36.000 0.00 0.00 35.09 2.01
3620 5011 8.255394 CATCTAGACACACATGACAACATAAA 57.745 34.615 0.00 0.00 35.09 1.40
3621 5012 7.832503 CATCTAGACACACATGACAACATAA 57.167 36.000 0.00 0.00 35.09 1.90


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.