Multiple sequence alignment - TraesCS5B01G526800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G526800 chr5B 100.000 4845 0 0 1 4845 685995371 685990527 0.000000e+00 8948.0
1 TraesCS5B01G526800 chr5B 94.963 1469 70 3 2389 3856 685648680 685650145 0.000000e+00 2300.0
2 TraesCS5B01G526800 chr5B 82.838 1748 253 30 2321 4036 685951447 685949715 0.000000e+00 1522.0
3 TraesCS5B01G526800 chr5B 81.720 1767 235 41 2251 4002 686051189 686049496 0.000000e+00 1393.0
4 TraesCS5B01G526800 chr5B 80.333 1861 274 43 2160 4003 686212473 686210688 0.000000e+00 1325.0
5 TraesCS5B01G526800 chr5B 85.405 692 41 22 3886 4525 685650143 685650826 0.000000e+00 664.0
6 TraesCS5B01G526800 chr5B 87.107 318 33 4 1664 1977 685993371 685993058 2.150000e-93 353.0
7 TraesCS5B01G526800 chr5B 87.107 318 33 4 2001 2314 685993708 685993395 2.150000e-93 353.0
8 TraesCS5B01G526800 chr5B 92.814 167 9 1 997 1163 685952347 685952184 6.270000e-59 239.0
9 TraesCS5B01G526800 chr5B 91.837 147 12 0 997 1143 686051739 686051593 6.360000e-49 206.0
10 TraesCS5B01G526800 chr5B 96.364 110 4 0 4595 4704 704168232 704168341 1.070000e-41 182.0
11 TraesCS5B01G526800 chr4A 94.462 1860 94 5 2000 3856 625247698 625249551 0.000000e+00 2856.0
12 TraesCS5B01G526800 chr4A 83.402 1711 237 19 2417 4104 624982274 624983960 0.000000e+00 1543.0
13 TraesCS5B01G526800 chr4A 91.206 1103 68 13 889 1977 625246923 625248010 0.000000e+00 1472.0
14 TraesCS5B01G526800 chr4A 83.627 1588 197 23 2417 4003 625176723 625178248 0.000000e+00 1434.0
15 TraesCS5B01G526800 chr4A 81.842 771 75 35 34 799 625242569 625243279 5.400000e-164 588.0
16 TraesCS5B01G526800 chr4A 84.518 633 41 21 4013 4601 625249624 625250243 1.510000e-159 573.0
17 TraesCS5B01G526800 chr4A 90.226 133 13 0 1011 1143 625175691 625175823 1.790000e-39 174.0
18 TraesCS5B01G526800 chr4A 96.154 52 1 1 3886 3937 625249549 625249599 3.110000e-12 84.2
19 TraesCS5B01G526800 chr4A 97.143 35 1 0 861 895 625246882 625246916 5.240000e-05 60.2
20 TraesCS5B01G526800 chr5D 91.808 2063 109 25 2542 4601 543840022 543838017 0.000000e+00 2819.0
21 TraesCS5B01G526800 chr5D 82.872 2131 302 30 2005 4104 544286652 544284554 0.000000e+00 1855.0
22 TraesCS5B01G526800 chr5D 81.462 1888 256 36 2131 4003 543858940 543857132 0.000000e+00 1461.0
23 TraesCS5B01G526800 chr5D 91.599 988 63 10 997 1977 543841813 543840839 0.000000e+00 1347.0
24 TraesCS5B01G526800 chr5D 91.501 553 39 6 2000 2549 543841152 543840605 0.000000e+00 754.0
25 TraesCS5B01G526800 chr5D 88.050 318 28 8 487 802 543842407 543842098 7.660000e-98 368.0
26 TraesCS5B01G526800 chr5D 97.902 143 2 1 4703 4845 543838020 543837879 3.750000e-61 246.0
27 TraesCS5B01G526800 chr5D 100.000 30 0 0 900 929 543841981 543841952 6.770000e-04 56.5
28 TraesCS5B01G526800 chr7D 80.812 271 44 7 533 802 606946123 606946386 6.360000e-49 206.0
29 TraesCS5B01G526800 chr7D 92.126 127 8 2 4595 4720 555213332 555213457 1.390000e-40 178.0
30 TraesCS5B01G526800 chr7A 80.882 272 41 9 533 802 699387246 699386984 2.290000e-48 204.0
31 TraesCS5B01G526800 chr7A 85.315 143 18 3 643 783 699461448 699461307 1.410000e-30 145.0
32 TraesCS5B01G526800 chr7A 80.864 162 29 2 643 802 699476383 699476222 5.090000e-25 126.0
33 TraesCS5B01G526800 chr2B 98.131 107 2 0 4595 4701 603352584 603352690 2.300000e-43 187.0
34 TraesCS5B01G526800 chr2B 95.614 114 4 1 4592 4704 579683645 579683758 1.070000e-41 182.0
35 TraesCS5B01G526800 chr6B 95.614 114 5 0 4594 4707 679979080 679978967 2.980000e-42 183.0
36 TraesCS5B01G526800 chr6B 94.828 116 5 1 4595 4709 602486084 602486199 3.850000e-41 180.0
37 TraesCS5B01G526800 chr5A 97.222 108 3 0 4598 4705 368170691 368170798 2.980000e-42 183.0
38 TraesCS5B01G526800 chr4B 92.623 122 7 1 4584 4705 653417777 653417896 1.790000e-39 174.0
39 TraesCS5B01G526800 chr7B 88.276 145 13 4 4597 4738 1816334 1816191 2.320000e-38 171.0
40 TraesCS5B01G526800 chr7B 84.028 144 18 4 643 783 693004689 693004548 3.040000e-27 134.0
41 TraesCS5B01G526800 chr1D 83.019 159 21 5 643 797 16965383 16965227 6.540000e-29 139.0
42 TraesCS5B01G526800 chr1A 82.390 159 22 6 643 797 18289821 18289665 3.040000e-27 134.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G526800 chr5B 685990527 685995371 4844 True 3218.00 8948 91.404667 1 4845 3 chr5B.!!$R3 4844
1 TraesCS5B01G526800 chr5B 685648680 685650826 2146 False 1482.00 2300 90.184000 2389 4525 2 chr5B.!!$F2 2136
2 TraesCS5B01G526800 chr5B 686210688 686212473 1785 True 1325.00 1325 80.333000 2160 4003 1 chr5B.!!$R1 1843
3 TraesCS5B01G526800 chr5B 685949715 685952347 2632 True 880.50 1522 87.826000 997 4036 2 chr5B.!!$R2 3039
4 TraesCS5B01G526800 chr5B 686049496 686051739 2243 True 799.50 1393 86.778500 997 4002 2 chr5B.!!$R4 3005
5 TraesCS5B01G526800 chr4A 624982274 624983960 1686 False 1543.00 1543 83.402000 2417 4104 1 chr4A.!!$F1 1687
6 TraesCS5B01G526800 chr4A 625242569 625250243 7674 False 938.90 2856 90.887500 34 4601 6 chr4A.!!$F3 4567
7 TraesCS5B01G526800 chr4A 625175691 625178248 2557 False 804.00 1434 86.926500 1011 4003 2 chr4A.!!$F2 2992
8 TraesCS5B01G526800 chr5D 544284554 544286652 2098 True 1855.00 1855 82.872000 2005 4104 1 chr5D.!!$R2 2099
9 TraesCS5B01G526800 chr5D 543857132 543858940 1808 True 1461.00 1461 81.462000 2131 4003 1 chr5D.!!$R1 1872
10 TraesCS5B01G526800 chr5D 543837879 543842407 4528 True 931.75 2819 93.476667 487 4845 6 chr5D.!!$R3 4358

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
566 604 0.031178 GTGTGCCTGTTCCAAAGCAG 59.969 55.0 0.0 0.0 35.56 4.24 F
840 881 0.034476 TGAACTGCCTCTGCTCAGTG 59.966 55.0 0.0 0.0 42.19 3.66 F
841 882 0.034616 GAACTGCCTCTGCTCAGTGT 59.965 55.0 0.0 0.0 42.19 3.55 F
1687 5507 0.106335 CGCCTCATCTGATCCAGCTT 59.894 55.0 0.0 0.0 0.00 3.74 F
3114 7684 0.317160 TACACTGGTCGCAAGGTGAG 59.683 55.0 0.0 0.0 38.47 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2029 5852 0.387202 TTGCATCAAACCCAACCACG 59.613 50.000 0.0 0.0 0.0 4.94 R
2634 7198 0.962489 CGAGGTTCTCTCCACAGTGT 59.038 55.000 0.0 0.0 39.3 3.55 R
3027 7597 1.532868 CATACGAGCAGCCCAAATAGC 59.467 52.381 0.0 0.0 0.0 2.97 R
3466 8036 0.604780 TGCCAGAGCTGAAGTCTTGC 60.605 55.000 0.0 0.0 40.8 4.01 R
4591 9285 0.323957 AAACGGAGGGAGTAGTTGGC 59.676 55.000 0.0 0.0 0.0 4.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.338500 GTTAGCTCAGCGTACAAGCTT 58.662 47.619 12.50 0.00 46.80 3.74
21 22 3.508762 GTTAGCTCAGCGTACAAGCTTA 58.491 45.455 12.50 3.63 46.80 3.09
22 23 2.969628 AGCTCAGCGTACAAGCTTAT 57.030 45.000 0.00 0.00 46.80 1.73
23 24 5.279384 GTTAGCTCAGCGTACAAGCTTATA 58.721 41.667 12.50 0.00 46.80 0.98
24 25 4.386867 AGCTCAGCGTACAAGCTTATAA 57.613 40.909 0.00 0.00 46.80 0.98
25 26 4.950050 AGCTCAGCGTACAAGCTTATAAT 58.050 39.130 0.00 0.00 46.80 1.28
26 27 4.985409 AGCTCAGCGTACAAGCTTATAATC 59.015 41.667 0.00 0.00 46.80 1.75
27 28 4.745125 GCTCAGCGTACAAGCTTATAATCA 59.255 41.667 0.00 0.00 46.80 2.57
28 29 5.234329 GCTCAGCGTACAAGCTTATAATCAA 59.766 40.000 0.00 0.00 46.80 2.57
29 30 6.563010 GCTCAGCGTACAAGCTTATAATCAAG 60.563 42.308 0.00 0.00 46.80 3.02
30 31 6.569780 TCAGCGTACAAGCTTATAATCAAGA 58.430 36.000 0.00 0.00 46.80 3.02
31 32 6.475727 TCAGCGTACAAGCTTATAATCAAGAC 59.524 38.462 0.00 0.00 46.80 3.01
32 33 6.255670 CAGCGTACAAGCTTATAATCAAGACA 59.744 38.462 0.00 0.00 46.80 3.41
42 43 7.725844 AGCTTATAATCAAGACAAATTAGGGGG 59.274 37.037 0.00 0.00 0.00 5.40
56 57 6.683312 AATTAGGGGGTTCTATACTAGTGC 57.317 41.667 5.39 0.00 0.00 4.40
59 60 4.632292 AGGGGGTTCTATACTAGTGCTTT 58.368 43.478 5.39 0.00 0.00 3.51
60 61 4.409247 AGGGGGTTCTATACTAGTGCTTTG 59.591 45.833 5.39 0.00 0.00 2.77
61 62 4.163649 GGGGGTTCTATACTAGTGCTTTGT 59.836 45.833 5.39 0.00 0.00 2.83
62 63 5.358090 GGGGTTCTATACTAGTGCTTTGTC 58.642 45.833 5.39 0.00 0.00 3.18
63 64 5.105064 GGGGTTCTATACTAGTGCTTTGTCA 60.105 44.000 5.39 0.00 0.00 3.58
65 66 7.048512 GGGTTCTATACTAGTGCTTTGTCATT 58.951 38.462 5.39 0.00 0.00 2.57
66 67 7.011482 GGGTTCTATACTAGTGCTTTGTCATTG 59.989 40.741 5.39 0.00 0.00 2.82
68 69 8.596380 GTTCTATACTAGTGCTTTGTCATTGTC 58.404 37.037 5.39 0.00 0.00 3.18
69 70 7.265673 TCTATACTAGTGCTTTGTCATTGTCC 58.734 38.462 5.39 0.00 0.00 4.02
84 85 3.608662 TCCGTCACCACCACCGAC 61.609 66.667 0.00 0.00 0.00 4.79
124 125 1.344942 GACACATCACCGTCGACAGC 61.345 60.000 17.16 0.00 0.00 4.40
131 132 0.670546 CACCGTCGACAGCAATCCTT 60.671 55.000 17.16 0.00 0.00 3.36
147 148 1.134220 TCCTTGTGTGTTCGGCTCTTT 60.134 47.619 0.00 0.00 0.00 2.52
148 149 1.676006 CCTTGTGTGTTCGGCTCTTTT 59.324 47.619 0.00 0.00 0.00 2.27
156 157 2.095969 TGTTCGGCTCTTTTATGTTGCG 60.096 45.455 0.00 0.00 0.00 4.85
191 192 1.152984 CCAGACACACTTGGCCACA 60.153 57.895 3.88 0.00 0.00 4.17
200 201 0.033504 ACTTGGCCACACTACACTCG 59.966 55.000 3.88 0.00 0.00 4.18
205 206 1.067142 GGCCACACTACACTCGATCAA 60.067 52.381 0.00 0.00 0.00 2.57
209 210 4.868171 GCCACACTACACTCGATCAATTTA 59.132 41.667 0.00 0.00 0.00 1.40
225 226 9.699985 CGATCAATTTAGTCTTCTTGAATCTTG 57.300 33.333 0.00 0.00 31.92 3.02
254 256 4.582701 AAATTTCATGGTCGTCAAGCAA 57.417 36.364 0.00 0.00 39.21 3.91
269 271 4.455190 GTCAAGCAAGCTCTCTCATTTCTT 59.545 41.667 0.00 0.00 0.00 2.52
270 272 4.454847 TCAAGCAAGCTCTCTCATTTCTTG 59.545 41.667 0.00 0.00 37.70 3.02
275 277 3.280295 AGCTCTCTCATTTCTTGCCATG 58.720 45.455 0.00 0.00 0.00 3.66
288 290 2.359797 CCATGGGCCCACACATCA 59.640 61.111 31.51 0.96 0.00 3.07
293 295 2.676471 GGCCCACACATCACCCAC 60.676 66.667 0.00 0.00 0.00 4.61
349 351 5.917541 TCCACTCATTTTTGTCTTCGTAC 57.082 39.130 0.00 0.00 0.00 3.67
351 353 5.818336 TCCACTCATTTTTGTCTTCGTACAA 59.182 36.000 0.00 0.00 37.58 2.41
352 354 6.316640 TCCACTCATTTTTGTCTTCGTACAAA 59.683 34.615 8.63 8.63 45.20 2.83
379 381 1.079503 CTTTTCCCTCTTTCTCGCCG 58.920 55.000 0.00 0.00 0.00 6.46
390 392 1.906994 TTCTCGCCGCCATTTTGTCG 61.907 55.000 0.00 0.00 0.00 4.35
391 393 2.357638 TCGCCGCCATTTTGTCGA 60.358 55.556 0.00 0.00 0.00 4.20
393 395 2.485122 GCCGCCATTTTGTCGAGG 59.515 61.111 0.00 0.00 0.00 4.63
396 398 1.419922 CGCCATTTTGTCGAGGACG 59.580 57.895 0.00 0.00 34.95 4.79
404 418 0.874175 TTGTCGAGGACGTGCAACAG 60.874 55.000 10.52 0.00 40.69 3.16
408 422 2.658707 GAGGACGTGCAACAGCGAC 61.659 63.158 10.52 0.00 35.74 5.19
419 433 1.136336 CAACAGCGACGCCTCTAAAAC 60.136 52.381 17.79 0.00 0.00 2.43
422 436 1.732259 CAGCGACGCCTCTAAAACATT 59.268 47.619 17.79 0.00 0.00 2.71
423 437 1.732259 AGCGACGCCTCTAAAACATTG 59.268 47.619 17.79 0.00 0.00 2.82
426 440 2.993899 CGACGCCTCTAAAACATTGTCT 59.006 45.455 0.00 0.00 0.00 3.41
441 455 6.704289 ACATTGTCTATGTTGCATGCTAAT 57.296 33.333 20.33 11.87 45.19 1.73
442 456 7.806409 ACATTGTCTATGTTGCATGCTAATA 57.194 32.000 20.33 12.36 45.19 0.98
443 457 8.224389 ACATTGTCTATGTTGCATGCTAATAA 57.776 30.769 20.33 1.02 45.19 1.40
444 458 8.347771 ACATTGTCTATGTTGCATGCTAATAAG 58.652 33.333 20.33 10.96 45.19 1.73
445 459 7.864108 TTGTCTATGTTGCATGCTAATAAGT 57.136 32.000 20.33 1.25 0.00 2.24
446 460 7.482654 TGTCTATGTTGCATGCTAATAAGTC 57.517 36.000 20.33 9.23 0.00 3.01
447 461 6.200854 TGTCTATGTTGCATGCTAATAAGTCG 59.799 38.462 20.33 3.08 0.00 4.18
448 462 3.673746 TGTTGCATGCTAATAAGTCGC 57.326 42.857 20.33 0.00 0.00 5.19
449 463 2.030335 TGTTGCATGCTAATAAGTCGCG 59.970 45.455 20.33 0.00 0.00 5.87
450 464 1.934589 TGCATGCTAATAAGTCGCGT 58.065 45.000 20.33 0.00 0.00 6.01
451 465 3.086818 TGCATGCTAATAAGTCGCGTA 57.913 42.857 20.33 0.00 0.00 4.42
452 466 3.049912 TGCATGCTAATAAGTCGCGTAG 58.950 45.455 20.33 0.00 0.00 3.51
453 467 3.050619 GCATGCTAATAAGTCGCGTAGT 58.949 45.455 11.37 0.00 0.00 2.73
454 468 3.121328 GCATGCTAATAAGTCGCGTAGTG 60.121 47.826 11.37 0.00 40.84 2.74
455 469 3.770263 TGCTAATAAGTCGCGTAGTGT 57.230 42.857 5.77 0.00 40.08 3.55
456 470 3.688272 TGCTAATAAGTCGCGTAGTGTC 58.312 45.455 5.77 0.00 40.08 3.67
457 471 2.712969 GCTAATAAGTCGCGTAGTGTCG 59.287 50.000 5.77 0.00 40.08 4.35
458 472 2.184385 AATAAGTCGCGTAGTGTCGG 57.816 50.000 5.77 0.00 40.08 4.79
459 473 0.248377 ATAAGTCGCGTAGTGTCGGC 60.248 55.000 5.77 0.00 40.08 5.54
460 474 2.257286 TAAGTCGCGTAGTGTCGGCC 62.257 60.000 5.77 0.00 40.08 6.13
463 477 4.430765 CGCGTAGTGTCGGCCCTT 62.431 66.667 0.00 0.00 0.00 3.95
464 478 2.047560 GCGTAGTGTCGGCCCTTT 60.048 61.111 0.00 0.00 0.00 3.11
465 479 1.670083 GCGTAGTGTCGGCCCTTTT 60.670 57.895 0.00 0.00 0.00 2.27
466 480 1.908066 GCGTAGTGTCGGCCCTTTTG 61.908 60.000 0.00 0.00 0.00 2.44
467 481 1.873863 GTAGTGTCGGCCCTTTTGC 59.126 57.895 0.00 0.00 0.00 3.68
468 482 0.605589 GTAGTGTCGGCCCTTTTGCT 60.606 55.000 0.00 0.00 0.00 3.91
469 483 0.978151 TAGTGTCGGCCCTTTTGCTA 59.022 50.000 0.00 0.00 0.00 3.49
470 484 0.321653 AGTGTCGGCCCTTTTGCTAG 60.322 55.000 0.00 0.00 0.00 3.42
471 485 1.674322 TGTCGGCCCTTTTGCTAGC 60.674 57.895 8.10 8.10 0.00 3.42
472 486 2.045340 TCGGCCCTTTTGCTAGCC 60.045 61.111 13.29 0.00 42.18 3.93
489 503 0.663153 GCCACACAGAGGAACAACAC 59.337 55.000 0.00 0.00 0.00 3.32
513 527 5.686841 CGTGGATGCACATAATATGGTTTTG 59.313 40.000 18.05 0.00 33.60 2.44
519 533 7.946381 TGCACATAATATGGTTTTGAAGGTA 57.054 32.000 5.16 0.00 33.60 3.08
562 600 1.021202 CGAAGTGTGCCTGTTCCAAA 58.979 50.000 0.00 0.00 0.00 3.28
563 601 1.002468 CGAAGTGTGCCTGTTCCAAAG 60.002 52.381 0.00 0.00 0.00 2.77
564 602 0.746659 AAGTGTGCCTGTTCCAAAGC 59.253 50.000 0.00 0.00 0.00 3.51
565 603 0.395586 AGTGTGCCTGTTCCAAAGCA 60.396 50.000 0.00 0.00 0.00 3.91
566 604 0.031178 GTGTGCCTGTTCCAAAGCAG 59.969 55.000 0.00 0.00 35.56 4.24
567 605 0.395586 TGTGCCTGTTCCAAAGCAGT 60.396 50.000 0.00 0.00 35.56 4.40
568 606 1.133945 TGTGCCTGTTCCAAAGCAGTA 60.134 47.619 0.00 0.00 35.56 2.74
569 607 1.537202 GTGCCTGTTCCAAAGCAGTAG 59.463 52.381 0.00 0.00 35.56 2.57
570 608 1.142870 TGCCTGTTCCAAAGCAGTAGT 59.857 47.619 0.00 0.00 0.00 2.73
571 609 1.537202 GCCTGTTCCAAAGCAGTAGTG 59.463 52.381 0.00 0.00 0.00 2.74
582 620 2.912986 CAGTAGTGCAACGCTTGGA 58.087 52.632 0.00 0.00 45.86 3.53
681 721 0.400213 TGCGAACCCAAAGATCCACT 59.600 50.000 0.00 0.00 0.00 4.00
729 770 7.661536 ACAGATACTAACTTGATCTTAGCCA 57.338 36.000 0.00 0.00 0.00 4.75
730 771 8.079211 ACAGATACTAACTTGATCTTAGCCAA 57.921 34.615 0.00 0.00 0.00 4.52
769 810 1.523154 TTTCATTGGTGACCCTGCGC 61.523 55.000 0.00 0.00 33.11 6.09
792 833 4.082125 CCACTTTTATTGCTCCCTGAACT 58.918 43.478 0.00 0.00 0.00 3.01
799 840 1.078567 GCTCCCTGAACTGCCTCTG 60.079 63.158 0.00 0.00 0.00 3.35
802 843 1.130054 TCCCTGAACTGCCTCTGCTT 61.130 55.000 0.00 0.00 38.71 3.91
803 844 0.251077 CCCTGAACTGCCTCTGCTTT 60.251 55.000 0.00 0.00 38.71 3.51
804 845 1.613836 CCTGAACTGCCTCTGCTTTT 58.386 50.000 0.00 0.00 38.71 2.27
805 846 1.959282 CCTGAACTGCCTCTGCTTTTT 59.041 47.619 0.00 0.00 38.71 1.94
828 869 2.849880 TTGTTGAGCAACTGAACTGC 57.150 45.000 13.80 0.00 41.67 4.40
830 871 1.312815 GTTGAGCAACTGAACTGCCT 58.687 50.000 6.12 0.00 40.86 4.75
831 872 1.265365 GTTGAGCAACTGAACTGCCTC 59.735 52.381 6.12 0.00 40.86 4.70
832 873 0.761187 TGAGCAACTGAACTGCCTCT 59.239 50.000 0.00 0.00 40.86 3.69
833 874 1.155042 GAGCAACTGAACTGCCTCTG 58.845 55.000 0.00 0.00 40.86 3.35
834 875 0.888285 AGCAACTGAACTGCCTCTGC 60.888 55.000 0.00 0.00 40.86 4.26
835 876 0.888285 GCAACTGAACTGCCTCTGCT 60.888 55.000 0.00 0.00 38.71 4.24
836 877 1.155042 CAACTGAACTGCCTCTGCTC 58.845 55.000 0.00 0.00 38.71 4.26
837 878 0.761187 AACTGAACTGCCTCTGCTCA 59.239 50.000 0.00 0.00 38.71 4.26
838 879 0.321021 ACTGAACTGCCTCTGCTCAG 59.679 55.000 0.00 0.00 40.97 3.35
839 880 0.321021 CTGAACTGCCTCTGCTCAGT 59.679 55.000 0.00 0.00 44.64 3.41
840 881 0.034476 TGAACTGCCTCTGCTCAGTG 59.966 55.000 0.00 0.00 42.19 3.66
841 882 0.034616 GAACTGCCTCTGCTCAGTGT 59.965 55.000 0.00 0.00 42.19 3.55
842 883 0.250209 AACTGCCTCTGCTCAGTGTG 60.250 55.000 0.00 0.00 42.19 3.82
843 884 2.031616 TGCCTCTGCTCAGTGTGC 59.968 61.111 10.23 10.23 38.71 4.57
844 885 2.031616 GCCTCTGCTCAGTGTGCA 59.968 61.111 18.18 18.18 38.81 4.57
845 886 1.598962 GCCTCTGCTCAGTGTGCAA 60.599 57.895 19.51 10.49 40.13 4.08
846 887 1.168407 GCCTCTGCTCAGTGTGCAAA 61.168 55.000 19.51 7.16 40.13 3.68
847 888 1.311859 CCTCTGCTCAGTGTGCAAAA 58.688 50.000 19.51 10.61 40.13 2.44
898 4519 4.862092 CAGCGATGCGAGCCTCGT 62.862 66.667 16.50 0.00 42.81 4.18
965 4614 1.094785 CCCCTATGCCAAAAGACACG 58.905 55.000 0.00 0.00 0.00 4.49
967 4616 0.451783 CCTATGCCAAAAGACACGGC 59.548 55.000 0.00 0.00 46.43 5.68
1165 4861 5.313712 TCCCCTCTTTTATCTTTCACACAC 58.686 41.667 0.00 0.00 0.00 3.82
1231 4952 4.721776 AGTAATCTTGCCCTAGTGAATCCA 59.278 41.667 0.00 0.00 0.00 3.41
1267 4997 5.238650 CCAGTATTTTGGCGAATTAGTAGGG 59.761 44.000 0.00 0.00 0.00 3.53
1280 5010 6.642950 CGAATTAGTAGGGACATCTTGATGAC 59.357 42.308 16.43 10.45 0.00 3.06
1283 5013 5.606348 AGTAGGGACATCTTGATGACTTC 57.394 43.478 16.43 9.31 0.00 3.01
1300 5030 6.620877 TGACTTCACAGGTGATATTTAGGT 57.379 37.500 2.52 0.00 39.64 3.08
1461 5237 7.601856 TCAGTTTTCCTTAATTGCAATGTAGG 58.398 34.615 24.32 24.32 0.00 3.18
1462 5238 7.450014 TCAGTTTTCCTTAATTGCAATGTAGGA 59.550 33.333 26.97 26.97 31.03 2.94
1463 5239 7.756722 CAGTTTTCCTTAATTGCAATGTAGGAG 59.243 37.037 28.07 18.97 33.20 3.69
1464 5240 7.451566 AGTTTTCCTTAATTGCAATGTAGGAGT 59.548 33.333 28.07 18.10 33.20 3.85
1465 5241 8.736244 GTTTTCCTTAATTGCAATGTAGGAGTA 58.264 33.333 28.07 21.56 33.20 2.59
1466 5242 8.506168 TTTCCTTAATTGCAATGTAGGAGTAG 57.494 34.615 28.07 12.98 33.20 2.57
1486 5262 7.201830 GGAGTAGATGAGTATTACAGTTGCTGA 60.202 40.741 2.91 0.00 35.18 4.26
1584 5404 7.854557 TGTGACTGATTATTGAGAAGGAATG 57.145 36.000 0.00 0.00 0.00 2.67
1662 5482 8.313292 TCCTTTTTCTCATTTGGGAAATGTATG 58.687 33.333 6.45 0.00 46.46 2.39
1669 5489 4.775058 TTTGGGAAATGTATGTTGGTCG 57.225 40.909 0.00 0.00 0.00 4.79
1673 5493 2.354821 GGAAATGTATGTTGGTCGCCTC 59.645 50.000 0.00 0.00 0.00 4.70
1676 5496 2.309528 TGTATGTTGGTCGCCTCATC 57.690 50.000 9.02 5.02 0.00 2.92
1681 5501 1.134699 TGTTGGTCGCCTCATCTGATC 60.135 52.381 0.00 0.00 0.00 2.92
1685 5505 0.599728 GTCGCCTCATCTGATCCAGC 60.600 60.000 0.00 0.00 0.00 4.85
1686 5506 0.758310 TCGCCTCATCTGATCCAGCT 60.758 55.000 0.00 0.00 0.00 4.24
1687 5507 0.106335 CGCCTCATCTGATCCAGCTT 59.894 55.000 0.00 0.00 0.00 3.74
1688 5508 1.342496 CGCCTCATCTGATCCAGCTTA 59.658 52.381 0.00 0.00 0.00 3.09
1773 5593 7.383300 TCACTTGATATGATTCAGAGTATTGCG 59.617 37.037 0.00 0.00 0.00 4.85
1850 5672 0.738412 GGTGCTGCCATGAACAATGC 60.738 55.000 0.00 0.00 34.67 3.56
1866 5688 6.094742 TGAACAATGCTTACTTCTGTTTGACA 59.905 34.615 0.00 0.00 30.62 3.58
1877 5699 5.418840 ACTTCTGTTTGACAACCAAGTGAAT 59.581 36.000 0.00 0.00 35.29 2.57
1913 5736 4.340894 TGATCGCATGCAAGTTTTCTAC 57.659 40.909 19.57 0.00 0.00 2.59
1934 5757 2.621998 CAAGAAGGGGAGCATGCTATTG 59.378 50.000 22.74 7.78 0.00 1.90
1964 5787 4.539870 ACGTCAAGCAAAATCATCACTTG 58.460 39.130 0.00 0.00 39.22 3.16
2008 5831 2.695359 TCGCTACAGAAATTGGTCACC 58.305 47.619 0.00 0.00 0.00 4.02
2029 5852 6.199937 ACCTGATGTGATTCAGTTTATTGC 57.800 37.500 1.24 0.00 41.30 3.56
2041 5864 2.696187 AGTTTATTGCGTGGTTGGGTTT 59.304 40.909 0.00 0.00 0.00 3.27
2045 5868 0.387202 TTGCGTGGTTGGGTTTGATG 59.613 50.000 0.00 0.00 0.00 3.07
2051 5874 1.202627 TGGTTGGGTTTGATGCAAAGC 60.203 47.619 12.24 12.24 46.81 3.51
2064 5887 4.021280 TGATGCAAAGCAGGATAAGCAAAA 60.021 37.500 0.00 0.00 43.65 2.44
2067 5890 3.124128 GCAAAGCAGGATAAGCAAAAAGC 59.876 43.478 0.00 0.00 46.19 3.51
2078 5901 2.375173 GCAAAAAGCCTCTCCCATTG 57.625 50.000 0.00 0.00 37.23 2.82
2089 5913 4.141711 GCCTCTCCCATTGTACACTTGATA 60.142 45.833 0.00 0.00 0.00 2.15
2098 5922 7.040892 CCCATTGTACACTTGATATGATTCAGG 60.041 40.741 0.00 0.00 0.00 3.86
2099 5923 7.040892 CCATTGTACACTTGATATGATTCAGGG 60.041 40.741 0.00 0.00 0.00 4.45
2101 5925 6.348498 TGTACACTTGATATGATTCAGGGTG 58.652 40.000 0.00 0.00 37.28 4.61
2107 5931 2.779755 TATGATTCAGGGTGTTGCGT 57.220 45.000 0.00 0.00 0.00 5.24
2114 5938 4.645921 GGGTGTTGCGTGCTTGGC 62.646 66.667 0.00 0.00 0.00 4.52
2124 5948 1.243342 CGTGCTTGGCTTGGATCCAA 61.243 55.000 25.53 25.53 40.98 3.53
2125 5949 0.968405 GTGCTTGGCTTGGATCCAAA 59.032 50.000 26.87 10.88 42.45 3.28
2126 5950 1.344114 GTGCTTGGCTTGGATCCAAAA 59.656 47.619 26.87 17.47 42.45 2.44
2138 5967 6.568462 GCTTGGATCCAAAATGTATATGGTCG 60.568 42.308 26.87 11.66 35.33 4.79
2145 5974 6.151985 TCCAAAATGTATATGGTCGCTTGTTT 59.848 34.615 0.00 0.00 35.66 2.83
2200 6037 6.364165 CCATGAACAATGCTTACTTCTGTTTG 59.636 38.462 0.00 0.00 34.67 2.93
2207 6044 3.745975 TGCTTACTTCTGTTTGATGACCG 59.254 43.478 0.00 0.00 0.00 4.79
2215 6052 5.400066 TCTGTTTGATGACCGAGTGAATA 57.600 39.130 0.00 0.00 0.00 1.75
2217 6054 6.406370 TCTGTTTGATGACCGAGTGAATAAT 58.594 36.000 0.00 0.00 0.00 1.28
2225 6162 8.029522 TGATGACCGAGTGAATAATAGATAAGC 58.970 37.037 0.00 0.00 0.00 3.09
2231 6172 8.993121 CCGAGTGAATAATAGATAAGCAAATGT 58.007 33.333 0.00 0.00 0.00 2.71
2236 6177 9.056005 TGAATAATAGATAAGCAAATGTTCGCT 57.944 29.630 0.00 0.00 41.20 4.93
2239 6180 9.884465 ATAATAGATAAGCAAATGTTCGCTTTC 57.116 29.630 1.54 1.16 46.04 2.62
2265 6206 4.494091 TTTCTAGAAGAAGGGGAGCATG 57.506 45.455 5.12 0.00 35.37 4.06
2271 6212 2.947127 AGAAGGGGAGCATGCTATTC 57.053 50.000 22.74 20.46 0.00 1.75
2272 6213 2.416638 AGAAGGGGAGCATGCTATTCT 58.583 47.619 22.74 22.19 0.00 2.40
2288 6229 3.933155 ATTCTGCTTTTATGTCGAGCG 57.067 42.857 0.00 0.00 39.23 5.03
2301 6242 2.667969 TGTCGAGCGAAATCATCACTTG 59.332 45.455 0.00 0.00 0.00 3.16
2302 6243 2.029728 GTCGAGCGAAATCATCACTTGG 59.970 50.000 0.00 0.00 0.00 3.61
2303 6244 2.094234 TCGAGCGAAATCATCACTTGGA 60.094 45.455 0.00 0.00 0.00 3.53
2304 6245 2.672874 CGAGCGAAATCATCACTTGGAA 59.327 45.455 0.00 0.00 0.00 3.53
2555 7112 9.877178 ATTTCTTGTACTGTATTAACTCCTGAG 57.123 33.333 0.00 0.00 0.00 3.35
2634 7198 7.607607 TGAATTTCTATGCAGCAGAGAAGTTAA 59.392 33.333 29.83 23.74 41.62 2.01
3027 7597 8.539674 GCCTAAAAATAGTCCAAATAAAATGCG 58.460 33.333 0.00 0.00 0.00 4.73
3104 7674 2.717580 TGTCGATGTGTACACTGGTC 57.282 50.000 25.60 18.49 0.00 4.02
3114 7684 0.317160 TACACTGGTCGCAAGGTGAG 59.683 55.000 0.00 0.00 38.47 3.51
3118 7688 4.329545 GGTCGCAAGGTGAGGCCA 62.330 66.667 5.01 0.00 41.77 5.36
3249 7819 1.754226 GTTTGAGTGGCAGGTTGGAAA 59.246 47.619 0.00 0.00 0.00 3.13
3284 7854 2.681848 GAGCACACCCTTGATCTTGATG 59.318 50.000 0.00 0.00 0.00 3.07
3485 8055 0.604780 GCAAGACTTCAGCTCTGGCA 60.605 55.000 0.00 0.00 41.70 4.92
3518 8088 4.686972 CTCATCTGACGCATTCTTTAGGA 58.313 43.478 0.00 0.00 0.00 2.94
3568 8138 2.152016 GCTAAGTGGGTGAAGTTGGAC 58.848 52.381 0.00 0.00 0.00 4.02
3595 8165 9.461312 AAGTTGGATAATTATGCTCTGTTTGTA 57.539 29.630 16.72 0.00 0.00 2.41
3703 8273 4.760530 ATCTGAAGATCCCGATGAAACA 57.239 40.909 0.00 0.00 0.00 2.83
3783 8353 7.994425 TCTTCTATGATATTTCGCTCTCTCT 57.006 36.000 0.00 0.00 0.00 3.10
3856 8473 5.307196 TGGTTCTGGCTAGTACTTCTTTCTT 59.693 40.000 0.00 0.00 0.00 2.52
3891 8509 2.101582 CCTGCCTAGCGTTTATCTCAGT 59.898 50.000 0.00 0.00 0.00 3.41
3939 8557 3.449377 GGTTTTCTGACTTTGGGACCAAA 59.551 43.478 15.17 15.17 42.77 3.28
3988 8610 0.961857 TGGGCATGCTGCTGTTACTG 60.962 55.000 18.92 0.00 44.28 2.74
4008 8630 1.268352 GCTGGTTGTATTGTGGCGAAA 59.732 47.619 0.00 0.00 0.00 3.46
4064 8686 2.770802 AGATGCAGCAGTAGAATGGTCT 59.229 45.455 4.07 0.00 37.95 3.85
4106 8730 7.710907 TCTGCTGTTAAATGAGACATATGTACC 59.289 37.037 8.71 4.23 0.00 3.34
4180 8853 2.689658 ACCTCCCGTGGATCATTCATA 58.310 47.619 0.00 0.00 0.00 2.15
4181 8854 3.251484 ACCTCCCGTGGATCATTCATAT 58.749 45.455 0.00 0.00 0.00 1.78
4182 8855 3.008375 ACCTCCCGTGGATCATTCATATG 59.992 47.826 0.00 0.00 0.00 1.78
4183 8856 3.005554 CTCCCGTGGATCATTCATATGC 58.994 50.000 0.00 0.00 0.00 3.14
4184 8857 2.639347 TCCCGTGGATCATTCATATGCT 59.361 45.455 0.00 0.00 0.00 3.79
4185 8858 3.072915 TCCCGTGGATCATTCATATGCTT 59.927 43.478 0.00 0.00 0.00 3.91
4186 8859 3.822735 CCCGTGGATCATTCATATGCTTT 59.177 43.478 0.00 0.00 0.00 3.51
4187 8860 4.279169 CCCGTGGATCATTCATATGCTTTT 59.721 41.667 0.00 0.00 0.00 2.27
4188 8861 5.455392 CCGTGGATCATTCATATGCTTTTC 58.545 41.667 0.00 0.00 0.00 2.29
4189 8862 5.008911 CCGTGGATCATTCATATGCTTTTCA 59.991 40.000 0.00 0.00 0.00 2.69
4190 8863 6.294342 CCGTGGATCATTCATATGCTTTTCAT 60.294 38.462 0.00 0.00 39.17 2.57
4191 8864 7.143340 CGTGGATCATTCATATGCTTTTCATT 58.857 34.615 0.00 0.00 36.63 2.57
4192 8865 7.114388 CGTGGATCATTCATATGCTTTTCATTG 59.886 37.037 0.00 0.00 36.63 2.82
4193 8866 7.924412 GTGGATCATTCATATGCTTTTCATTGT 59.076 33.333 0.00 0.00 36.63 2.71
4194 8867 8.479689 TGGATCATTCATATGCTTTTCATTGTT 58.520 29.630 0.00 0.00 36.63 2.83
4195 8868 9.321562 GGATCATTCATATGCTTTTCATTGTTT 57.678 29.630 0.00 0.00 36.63 2.83
4197 8870 9.661563 ATCATTCATATGCTTTTCATTGTTTGT 57.338 25.926 0.00 0.00 36.63 2.83
4198 8871 8.927721 TCATTCATATGCTTTTCATTGTTTGTG 58.072 29.630 0.00 0.00 36.63 3.33
4199 8872 7.655236 TTCATATGCTTTTCATTGTTTGTGG 57.345 32.000 0.00 0.00 36.63 4.17
4201 8874 7.890515 TCATATGCTTTTCATTGTTTGTGGTA 58.109 30.769 0.00 0.00 36.63 3.25
4202 8875 8.530311 TCATATGCTTTTCATTGTTTGTGGTAT 58.470 29.630 0.00 0.00 36.63 2.73
4203 8876 9.153721 CATATGCTTTTCATTGTTTGTGGTATT 57.846 29.630 0.00 0.00 36.63 1.89
4204 8877 6.841443 TGCTTTTCATTGTTTGTGGTATTG 57.159 33.333 0.00 0.00 0.00 1.90
4205 8878 5.757320 TGCTTTTCATTGTTTGTGGTATTGG 59.243 36.000 0.00 0.00 0.00 3.16
4206 8879 5.988561 GCTTTTCATTGTTTGTGGTATTGGA 59.011 36.000 0.00 0.00 0.00 3.53
4207 8880 6.650390 GCTTTTCATTGTTTGTGGTATTGGAT 59.350 34.615 0.00 0.00 0.00 3.41
4208 8881 7.148590 GCTTTTCATTGTTTGTGGTATTGGATC 60.149 37.037 0.00 0.00 0.00 3.36
4209 8882 6.907853 TTCATTGTTTGTGGTATTGGATCA 57.092 33.333 0.00 0.00 0.00 2.92
4210 8883 7.479352 TTCATTGTTTGTGGTATTGGATCAT 57.521 32.000 0.00 0.00 0.00 2.45
4211 8884 7.479352 TCATTGTTTGTGGTATTGGATCATT 57.521 32.000 0.00 0.00 0.00 2.57
4212 8885 7.546358 TCATTGTTTGTGGTATTGGATCATTC 58.454 34.615 0.00 0.00 0.00 2.67
4213 8886 6.907853 TTGTTTGTGGTATTGGATCATTCA 57.092 33.333 0.00 0.00 0.00 2.57
4214 8887 7.479352 TTGTTTGTGGTATTGGATCATTCAT 57.521 32.000 0.00 0.00 0.00 2.57
4215 8888 6.865411 TGTTTGTGGTATTGGATCATTCATG 58.135 36.000 0.00 0.00 0.00 3.07
4216 8889 6.436847 TGTTTGTGGTATTGGATCATTCATGT 59.563 34.615 0.00 0.00 0.00 3.21
4217 8890 7.613411 TGTTTGTGGTATTGGATCATTCATGTA 59.387 33.333 0.00 0.00 0.00 2.29
4218 8891 8.632679 GTTTGTGGTATTGGATCATTCATGTAT 58.367 33.333 0.00 0.00 0.00 2.29
4219 8892 8.765488 TTGTGGTATTGGATCATTCATGTATT 57.235 30.769 0.00 0.00 0.00 1.89
4220 8893 8.168790 TGTGGTATTGGATCATTCATGTATTG 57.831 34.615 0.00 0.00 0.00 1.90
4224 8898 8.680903 GGTATTGGATCATTCATGTATTGGATC 58.319 37.037 0.00 0.00 0.00 3.36
4344 9037 3.366396 GAATGTACTGTCCTCTCCTCCA 58.634 50.000 0.00 0.00 0.00 3.86
4345 9038 3.697190 ATGTACTGTCCTCTCCTCCAT 57.303 47.619 0.00 0.00 0.00 3.41
4346 9039 3.019799 TGTACTGTCCTCTCCTCCATC 57.980 52.381 0.00 0.00 0.00 3.51
4347 9040 2.583101 TGTACTGTCCTCTCCTCCATCT 59.417 50.000 0.00 0.00 0.00 2.90
4348 9041 2.938428 ACTGTCCTCTCCTCCATCTT 57.062 50.000 0.00 0.00 0.00 2.40
4373 9066 7.922699 AGTTTATTATCTCCAGCCTAAGACT 57.077 36.000 0.00 0.00 0.00 3.24
4374 9067 7.731054 AGTTTATTATCTCCAGCCTAAGACTG 58.269 38.462 0.00 0.00 34.82 3.51
4384 9077 3.764434 CAGCCTAAGACTGTACTCTTGGA 59.236 47.826 9.08 0.00 31.94 3.53
4467 9160 6.796426 GTCTTTTGACTGAACTTTAAGCCTT 58.204 36.000 0.00 0.00 45.55 4.35
4469 9162 5.514274 TTTGACTGAACTTTAAGCCTTGG 57.486 39.130 0.00 0.00 0.00 3.61
4591 9285 3.455910 TCAGGATACCATTGGAGAACTGG 59.544 47.826 10.37 0.00 36.09 4.00
4597 9291 1.548582 CCATTGGAGAACTGGCCAACT 60.549 52.381 7.01 6.69 46.06 3.16
4598 9292 2.290896 CCATTGGAGAACTGGCCAACTA 60.291 50.000 7.01 0.00 46.06 2.24
4599 9293 2.561478 TTGGAGAACTGGCCAACTAC 57.439 50.000 7.01 8.22 39.14 2.73
4600 9294 1.729586 TGGAGAACTGGCCAACTACT 58.270 50.000 7.01 3.83 0.00 2.57
4601 9295 1.623811 TGGAGAACTGGCCAACTACTC 59.376 52.381 7.01 12.97 0.00 2.59
4602 9296 1.066071 GGAGAACTGGCCAACTACTCC 60.066 57.143 22.88 22.88 36.23 3.85
4603 9297 0.984995 AGAACTGGCCAACTACTCCC 59.015 55.000 7.01 0.00 0.00 4.30
4604 9298 0.984995 GAACTGGCCAACTACTCCCT 59.015 55.000 7.01 0.00 0.00 4.20
4605 9299 0.984995 AACTGGCCAACTACTCCCTC 59.015 55.000 7.01 0.00 0.00 4.30
4606 9300 0.910088 ACTGGCCAACTACTCCCTCC 60.910 60.000 7.01 0.00 0.00 4.30
4607 9301 1.961180 CTGGCCAACTACTCCCTCCG 61.961 65.000 7.01 0.00 0.00 4.63
4608 9302 1.988406 GGCCAACTACTCCCTCCGT 60.988 63.158 0.00 0.00 0.00 4.69
4609 9303 1.551019 GGCCAACTACTCCCTCCGTT 61.551 60.000 0.00 0.00 0.00 4.44
4610 9304 0.323957 GCCAACTACTCCCTCCGTTT 59.676 55.000 0.00 0.00 0.00 3.60
4611 9305 1.944430 GCCAACTACTCCCTCCGTTTG 60.944 57.143 0.00 0.00 0.00 2.93
4612 9306 1.338769 CCAACTACTCCCTCCGTTTGG 60.339 57.143 0.00 0.00 0.00 3.28
4613 9307 1.621814 CAACTACTCCCTCCGTTTGGA 59.378 52.381 0.00 0.00 43.88 3.53
4614 9308 2.019807 ACTACTCCCTCCGTTTGGAA 57.980 50.000 0.00 0.00 45.87 3.53
4615 9309 2.547990 ACTACTCCCTCCGTTTGGAAT 58.452 47.619 0.00 0.00 45.87 3.01
4616 9310 2.910977 ACTACTCCCTCCGTTTGGAATT 59.089 45.455 0.00 0.00 45.87 2.17
4617 9311 4.098894 ACTACTCCCTCCGTTTGGAATTA 58.901 43.478 0.00 0.00 45.87 1.40
4618 9312 3.345508 ACTCCCTCCGTTTGGAATTAC 57.654 47.619 0.00 0.00 45.87 1.89
4619 9313 2.910977 ACTCCCTCCGTTTGGAATTACT 59.089 45.455 0.00 0.00 45.87 2.24
4620 9314 3.329814 ACTCCCTCCGTTTGGAATTACTT 59.670 43.478 0.00 0.00 45.87 2.24
4621 9315 3.681593 TCCCTCCGTTTGGAATTACTTG 58.318 45.455 0.00 0.00 45.87 3.16
4622 9316 3.073356 TCCCTCCGTTTGGAATTACTTGT 59.927 43.478 0.00 0.00 45.87 3.16
4623 9317 3.439129 CCCTCCGTTTGGAATTACTTGTC 59.561 47.826 0.00 0.00 45.87 3.18
4624 9318 3.124636 CCTCCGTTTGGAATTACTTGTCG 59.875 47.826 0.00 0.00 45.87 4.35
4625 9319 2.481185 TCCGTTTGGAATTACTTGTCGC 59.519 45.455 0.00 0.00 42.85 5.19
4626 9320 2.492001 CGTTTGGAATTACTTGTCGCG 58.508 47.619 0.00 0.00 0.00 5.87
4627 9321 2.156117 CGTTTGGAATTACTTGTCGCGA 59.844 45.455 3.71 3.71 0.00 5.87
4628 9322 3.363182 CGTTTGGAATTACTTGTCGCGAA 60.363 43.478 12.06 0.00 0.00 4.70
4629 9323 4.529446 GTTTGGAATTACTTGTCGCGAAA 58.471 39.130 12.06 0.54 0.00 3.46
4630 9324 4.815040 TTGGAATTACTTGTCGCGAAAA 57.185 36.364 12.06 12.01 0.00 2.29
4631 9325 5.365403 TTGGAATTACTTGTCGCGAAAAT 57.635 34.783 13.05 5.74 0.00 1.82
4632 9326 4.717991 TGGAATTACTTGTCGCGAAAATG 58.282 39.130 13.05 9.32 0.00 2.32
4633 9327 4.095610 GGAATTACTTGTCGCGAAAATGG 58.904 43.478 13.05 4.35 0.00 3.16
4634 9328 4.142773 GGAATTACTTGTCGCGAAAATGGA 60.143 41.667 13.05 0.56 0.00 3.41
4635 9329 5.448632 GGAATTACTTGTCGCGAAAATGGAT 60.449 40.000 13.05 3.91 0.00 3.41
4636 9330 2.900122 ACTTGTCGCGAAAATGGATG 57.100 45.000 13.05 2.76 0.00 3.51
4637 9331 2.151202 ACTTGTCGCGAAAATGGATGT 58.849 42.857 13.05 3.46 0.00 3.06
4638 9332 3.331150 ACTTGTCGCGAAAATGGATGTA 58.669 40.909 13.05 0.00 0.00 2.29
4639 9333 3.938963 ACTTGTCGCGAAAATGGATGTAT 59.061 39.130 13.05 0.00 0.00 2.29
4640 9334 4.034048 ACTTGTCGCGAAAATGGATGTATC 59.966 41.667 13.05 0.00 0.00 2.24
4641 9335 3.792401 TGTCGCGAAAATGGATGTATCT 58.208 40.909 12.06 0.00 0.00 1.98
4642 9336 4.939271 TGTCGCGAAAATGGATGTATCTA 58.061 39.130 12.06 0.00 0.00 1.98
4643 9337 4.982295 TGTCGCGAAAATGGATGTATCTAG 59.018 41.667 12.06 0.00 0.00 2.43
4644 9338 5.220381 GTCGCGAAAATGGATGTATCTAGA 58.780 41.667 12.06 0.00 0.00 2.43
4645 9339 5.864474 GTCGCGAAAATGGATGTATCTAGAT 59.136 40.000 12.06 10.73 0.00 1.98
4646 9340 7.027760 GTCGCGAAAATGGATGTATCTAGATA 58.972 38.462 12.06 8.44 0.00 1.98
4647 9341 7.702772 GTCGCGAAAATGGATGTATCTAGATAT 59.297 37.037 12.06 1.62 0.00 1.63
4648 9342 8.899771 TCGCGAAAATGGATGTATCTAGATATA 58.100 33.333 15.43 13.22 0.00 0.86
4649 9343 9.684448 CGCGAAAATGGATGTATCTAGATATAT 57.316 33.333 18.82 18.82 0.00 0.86
4677 9371 9.967346 TTAGTTCTAGATACATCCATTTTCGAG 57.033 33.333 0.00 0.00 0.00 4.04
4678 9372 8.239038 AGTTCTAGATACATCCATTTTCGAGA 57.761 34.615 0.00 0.00 0.00 4.04
4679 9373 8.138712 AGTTCTAGATACATCCATTTTCGAGAC 58.861 37.037 0.00 0.00 0.00 3.36
4680 9374 7.582667 TCTAGATACATCCATTTTCGAGACA 57.417 36.000 0.00 0.00 0.00 3.41
4681 9375 8.007405 TCTAGATACATCCATTTTCGAGACAA 57.993 34.615 0.00 0.00 0.00 3.18
4682 9376 8.138074 TCTAGATACATCCATTTTCGAGACAAG 58.862 37.037 0.00 0.00 0.00 3.16
4683 9377 6.644347 AGATACATCCATTTTCGAGACAAGT 58.356 36.000 0.00 0.00 0.00 3.16
4684 9378 7.782049 AGATACATCCATTTTCGAGACAAGTA 58.218 34.615 0.00 0.00 0.00 2.24
4685 9379 8.258007 AGATACATCCATTTTCGAGACAAGTAA 58.742 33.333 0.00 0.00 0.00 2.24
4686 9380 8.964476 ATACATCCATTTTCGAGACAAGTAAT 57.036 30.769 0.00 0.00 0.00 1.89
4687 9381 7.687941 ACATCCATTTTCGAGACAAGTAATT 57.312 32.000 0.00 0.00 0.00 1.40
4688 9382 7.752695 ACATCCATTTTCGAGACAAGTAATTC 58.247 34.615 0.00 0.00 0.00 2.17
4689 9383 6.737254 TCCATTTTCGAGACAAGTAATTCC 57.263 37.500 0.00 0.00 0.00 3.01
4690 9384 6.234920 TCCATTTTCGAGACAAGTAATTCCA 58.765 36.000 0.00 0.00 0.00 3.53
4691 9385 6.712998 TCCATTTTCGAGACAAGTAATTCCAA 59.287 34.615 0.00 0.00 0.00 3.53
4692 9386 7.229707 TCCATTTTCGAGACAAGTAATTCCAAA 59.770 33.333 0.00 0.00 0.00 3.28
4693 9387 7.326063 CCATTTTCGAGACAAGTAATTCCAAAC 59.674 37.037 0.00 0.00 0.00 2.93
4694 9388 5.585500 TTCGAGACAAGTAATTCCAAACG 57.415 39.130 0.00 0.00 0.00 3.60
4695 9389 3.991773 TCGAGACAAGTAATTCCAAACGG 59.008 43.478 0.00 0.00 0.00 4.44
4696 9390 3.991773 CGAGACAAGTAATTCCAAACGGA 59.008 43.478 0.00 0.00 0.00 4.69
4697 9391 4.091509 CGAGACAAGTAATTCCAAACGGAG 59.908 45.833 0.00 0.00 32.88 4.63
4698 9392 4.324267 AGACAAGTAATTCCAAACGGAGG 58.676 43.478 0.00 0.00 32.88 4.30
4699 9393 3.418047 ACAAGTAATTCCAAACGGAGGG 58.582 45.455 0.00 0.00 32.88 4.30
4700 9394 3.073356 ACAAGTAATTCCAAACGGAGGGA 59.927 43.478 0.00 0.00 32.88 4.20
4701 9395 3.629142 AGTAATTCCAAACGGAGGGAG 57.371 47.619 0.00 0.00 34.02 4.30
4757 9451 7.542477 ACTGTTTCTATGATAGAGAACAACACG 59.458 37.037 20.21 14.94 36.43 4.49
4798 9492 9.054922 GGTTACATACAACCAAACTACTGTAAA 57.945 33.333 0.17 0.00 46.14 2.01
4801 9495 6.206048 ACATACAACCAAACTACTGTAAAGCC 59.794 38.462 0.00 0.00 0.00 4.35
4802 9496 3.562557 ACAACCAAACTACTGTAAAGCCG 59.437 43.478 0.00 0.00 0.00 5.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.997669 AGCTTGTACGCTGAGCTAAC 58.002 50.000 1.78 0.62 44.41 2.34
1 2 2.743636 AAGCTTGTACGCTGAGCTAA 57.256 45.000 1.78 0.00 45.42 3.09
2 3 5.509716 TTATAAGCTTGTACGCTGAGCTA 57.490 39.130 9.86 0.00 45.42 3.32
4 5 4.745125 TGATTATAAGCTTGTACGCTGAGC 59.255 41.667 9.86 0.00 40.79 4.26
5 6 6.697455 TCTTGATTATAAGCTTGTACGCTGAG 59.303 38.462 9.86 1.95 40.79 3.35
6 7 6.475727 GTCTTGATTATAAGCTTGTACGCTGA 59.524 38.462 9.86 0.00 40.79 4.26
7 8 6.255670 TGTCTTGATTATAAGCTTGTACGCTG 59.744 38.462 9.86 0.00 40.79 5.18
8 9 6.338146 TGTCTTGATTATAAGCTTGTACGCT 58.662 36.000 9.86 0.00 43.31 5.07
9 10 6.583912 TGTCTTGATTATAAGCTTGTACGC 57.416 37.500 9.86 2.05 0.00 4.42
10 11 9.988350 AATTTGTCTTGATTATAAGCTTGTACG 57.012 29.630 9.86 0.00 0.00 3.67
14 15 9.956720 CCCTAATTTGTCTTGATTATAAGCTTG 57.043 33.333 9.86 0.00 0.00 4.01
15 16 9.136323 CCCCTAATTTGTCTTGATTATAAGCTT 57.864 33.333 3.48 3.48 0.00 3.74
16 17 7.725844 CCCCCTAATTTGTCTTGATTATAAGCT 59.274 37.037 1.93 0.00 0.00 3.74
17 18 7.505923 ACCCCCTAATTTGTCTTGATTATAAGC 59.494 37.037 0.00 0.00 0.00 3.09
18 19 8.996651 ACCCCCTAATTTGTCTTGATTATAAG 57.003 34.615 0.00 0.00 0.00 1.73
19 20 9.416284 GAACCCCCTAATTTGTCTTGATTATAA 57.584 33.333 0.00 0.00 0.00 0.98
20 21 8.787818 AGAACCCCCTAATTTGTCTTGATTATA 58.212 33.333 0.00 0.00 0.00 0.98
21 22 7.652554 AGAACCCCCTAATTTGTCTTGATTAT 58.347 34.615 0.00 0.00 0.00 1.28
22 23 7.039722 AGAACCCCCTAATTTGTCTTGATTA 57.960 36.000 0.00 0.00 0.00 1.75
23 24 5.903923 AGAACCCCCTAATTTGTCTTGATT 58.096 37.500 0.00 0.00 0.00 2.57
24 25 5.536497 AGAACCCCCTAATTTGTCTTGAT 57.464 39.130 0.00 0.00 0.00 2.57
25 26 6.652205 ATAGAACCCCCTAATTTGTCTTGA 57.348 37.500 0.00 0.00 0.00 3.02
26 27 7.574607 AGTATAGAACCCCCTAATTTGTCTTG 58.425 38.462 0.00 0.00 0.00 3.02
27 28 7.766736 AGTATAGAACCCCCTAATTTGTCTT 57.233 36.000 0.00 0.00 0.00 3.01
28 29 8.072480 ACTAGTATAGAACCCCCTAATTTGTCT 58.928 37.037 0.00 0.00 42.77 3.41
29 30 8.148999 CACTAGTATAGAACCCCCTAATTTGTC 58.851 40.741 0.00 0.00 42.77 3.18
30 31 7.419865 GCACTAGTATAGAACCCCCTAATTTGT 60.420 40.741 0.00 0.00 42.77 2.83
31 32 6.935208 GCACTAGTATAGAACCCCCTAATTTG 59.065 42.308 0.00 0.00 42.77 2.32
32 33 6.850231 AGCACTAGTATAGAACCCCCTAATTT 59.150 38.462 0.00 0.00 42.77 1.82
42 43 8.480643 ACAATGACAAAGCACTAGTATAGAAC 57.519 34.615 0.00 0.00 42.77 3.01
56 57 2.032030 GTGGTGACGGACAATGACAAAG 60.032 50.000 0.00 0.00 0.00 2.77
59 60 0.250124 GGTGGTGACGGACAATGACA 60.250 55.000 0.00 0.00 0.00 3.58
60 61 0.250124 TGGTGGTGACGGACAATGAC 60.250 55.000 0.00 0.00 0.00 3.06
61 62 0.250124 GTGGTGGTGACGGACAATGA 60.250 55.000 0.00 0.00 0.00 2.57
62 63 1.234615 GGTGGTGGTGACGGACAATG 61.235 60.000 0.00 0.00 0.00 2.82
63 64 1.072505 GGTGGTGGTGACGGACAAT 59.927 57.895 0.00 0.00 0.00 2.71
65 66 3.918977 CGGTGGTGGTGACGGACA 61.919 66.667 0.00 0.00 0.00 4.02
66 67 3.608662 TCGGTGGTGGTGACGGAC 61.609 66.667 0.00 0.00 0.00 4.79
68 69 3.159858 AAGTCGGTGGTGGTGACGG 62.160 63.158 0.00 0.00 37.69 4.79
69 70 1.954146 CAAGTCGGTGGTGGTGACG 60.954 63.158 0.00 0.00 37.69 4.35
84 85 0.695803 AGCCCCTATCCCTGACCAAG 60.696 60.000 0.00 0.00 0.00 3.61
97 98 1.380302 GGTGATGTGTCAAGCCCCT 59.620 57.895 0.00 0.00 35.80 4.79
131 132 3.472652 ACATAAAAGAGCCGAACACACA 58.527 40.909 0.00 0.00 0.00 3.72
147 148 1.742831 GGTGCCATCTTCGCAACATAA 59.257 47.619 0.00 0.00 43.64 1.90
148 149 1.378531 GGTGCCATCTTCGCAACATA 58.621 50.000 0.00 0.00 43.64 2.29
176 177 1.226746 GTAGTGTGGCCAAGTGTGTC 58.773 55.000 7.24 0.00 0.00 3.67
191 192 8.057536 AGAAGACTAAATTGATCGAGTGTAGT 57.942 34.615 0.00 3.69 0.00 2.73
233 235 4.549458 CTTGCTTGACGACCATGAAATTT 58.451 39.130 0.00 0.00 0.00 1.82
254 256 3.280295 CATGGCAAGAAATGAGAGAGCT 58.720 45.455 0.00 0.00 0.00 4.09
275 277 3.978193 TGGGTGATGTGTGGGCCC 61.978 66.667 17.59 17.59 39.73 5.80
279 281 2.035626 GGGGTGGGTGATGTGTGG 59.964 66.667 0.00 0.00 0.00 4.17
301 303 5.975988 AGGCTTTGTTCAGGGATAAGATA 57.024 39.130 0.00 0.00 0.00 1.98
305 307 4.380843 TGAAGGCTTTGTTCAGGGATAA 57.619 40.909 0.00 0.00 30.36 1.75
379 381 0.165944 CACGTCCTCGACAAAATGGC 59.834 55.000 0.00 0.00 40.62 4.40
390 392 2.355837 TCGCTGTTGCACGTCCTC 60.356 61.111 0.00 0.00 39.64 3.71
391 393 2.661866 GTCGCTGTTGCACGTCCT 60.662 61.111 0.00 0.00 39.64 3.85
393 395 4.702826 GCGTCGCTGTTGCACGTC 62.703 66.667 10.68 0.00 41.80 4.34
396 398 4.077188 GAGGCGTCGCTGTTGCAC 62.077 66.667 18.11 0.00 39.64 4.57
404 418 1.463444 ACAATGTTTTAGAGGCGTCGC 59.537 47.619 9.22 9.22 0.00 5.19
419 433 8.347771 ACTTATTAGCATGCAACATAGACAATG 58.652 33.333 21.98 0.00 41.74 2.82
422 436 6.200854 CGACTTATTAGCATGCAACATAGACA 59.799 38.462 21.98 0.00 0.00 3.41
423 437 6.584954 CGACTTATTAGCATGCAACATAGAC 58.415 40.000 21.98 10.36 0.00 2.59
426 440 4.084589 CGCGACTTATTAGCATGCAACATA 60.085 41.667 21.98 9.76 0.00 2.29
436 450 2.712969 CGACACTACGCGACTTATTAGC 59.287 50.000 15.93 0.00 0.00 3.09
437 451 3.286576 CCGACACTACGCGACTTATTAG 58.713 50.000 15.93 5.22 0.00 1.73
438 452 2.539547 GCCGACACTACGCGACTTATTA 60.540 50.000 15.93 0.00 0.00 0.98
439 453 1.796617 GCCGACACTACGCGACTTATT 60.797 52.381 15.93 0.00 0.00 1.40
440 454 0.248377 GCCGACACTACGCGACTTAT 60.248 55.000 15.93 0.00 0.00 1.73
441 455 1.135315 GCCGACACTACGCGACTTA 59.865 57.895 15.93 0.00 0.00 2.24
442 456 2.126580 GCCGACACTACGCGACTT 60.127 61.111 15.93 0.00 0.00 3.01
443 457 4.112341 GGCCGACACTACGCGACT 62.112 66.667 15.93 0.00 0.00 4.18
446 460 3.927163 AAAGGGCCGACACTACGCG 62.927 63.158 3.53 3.53 0.00 6.01
447 461 1.670083 AAAAGGGCCGACACTACGC 60.670 57.895 0.00 0.00 0.00 4.42
448 462 1.908066 GCAAAAGGGCCGACACTACG 61.908 60.000 0.00 0.00 0.00 3.51
449 463 0.605589 AGCAAAAGGGCCGACACTAC 60.606 55.000 0.00 0.00 0.00 2.73
450 464 0.978151 TAGCAAAAGGGCCGACACTA 59.022 50.000 0.00 0.00 0.00 2.74
451 465 0.321653 CTAGCAAAAGGGCCGACACT 60.322 55.000 0.00 0.00 0.00 3.55
452 466 1.923227 GCTAGCAAAAGGGCCGACAC 61.923 60.000 10.63 0.00 0.00 3.67
453 467 1.674322 GCTAGCAAAAGGGCCGACA 60.674 57.895 10.63 0.00 0.00 4.35
454 468 2.407428 GGCTAGCAAAAGGGCCGAC 61.407 63.158 18.24 0.00 35.08 4.79
455 469 2.045340 GGCTAGCAAAAGGGCCGA 60.045 61.111 18.24 0.00 35.08 5.54
456 470 2.361104 TGGCTAGCAAAAGGGCCG 60.361 61.111 18.24 0.00 46.72 6.13
457 471 1.606313 TGTGGCTAGCAAAAGGGCC 60.606 57.895 18.24 0.00 44.31 5.80
458 472 1.178534 TGTGTGGCTAGCAAAAGGGC 61.179 55.000 18.24 0.00 0.00 5.19
459 473 0.883833 CTGTGTGGCTAGCAAAAGGG 59.116 55.000 18.24 0.00 0.00 3.95
460 474 1.808945 CTCTGTGTGGCTAGCAAAAGG 59.191 52.381 18.24 1.89 0.00 3.11
461 475 1.808945 CCTCTGTGTGGCTAGCAAAAG 59.191 52.381 18.24 6.12 0.00 2.27
462 476 1.419762 TCCTCTGTGTGGCTAGCAAAA 59.580 47.619 18.24 0.00 0.00 2.44
463 477 1.055849 TCCTCTGTGTGGCTAGCAAA 58.944 50.000 18.24 0.33 0.00 3.68
464 478 1.055849 TTCCTCTGTGTGGCTAGCAA 58.944 50.000 18.24 0.85 0.00 3.91
465 479 0.321671 GTTCCTCTGTGTGGCTAGCA 59.678 55.000 18.24 0.00 0.00 3.49
466 480 0.321671 TGTTCCTCTGTGTGGCTAGC 59.678 55.000 6.04 6.04 0.00 3.42
467 481 2.224281 TGTTGTTCCTCTGTGTGGCTAG 60.224 50.000 0.00 0.00 0.00 3.42
468 482 1.765904 TGTTGTTCCTCTGTGTGGCTA 59.234 47.619 0.00 0.00 0.00 3.93
469 483 0.546122 TGTTGTTCCTCTGTGTGGCT 59.454 50.000 0.00 0.00 0.00 4.75
470 484 0.663153 GTGTTGTTCCTCTGTGTGGC 59.337 55.000 0.00 0.00 0.00 5.01
471 485 0.937304 CGTGTTGTTCCTCTGTGTGG 59.063 55.000 0.00 0.00 0.00 4.17
472 486 1.327460 CACGTGTTGTTCCTCTGTGTG 59.673 52.381 7.58 0.00 0.00 3.82
489 503 5.437289 AAACCATATTATGTGCATCCACG 57.563 39.130 3.10 0.00 45.04 4.94
545 559 0.746659 GCTTTGGAACAGGCACACTT 59.253 50.000 0.00 0.00 42.39 3.16
562 600 1.230635 CCAAGCGTTGCACTACTGCT 61.231 55.000 0.00 0.00 44.57 4.24
563 601 1.207593 CCAAGCGTTGCACTACTGC 59.792 57.895 0.00 0.00 44.52 4.40
564 602 0.512952 GTCCAAGCGTTGCACTACTG 59.487 55.000 0.00 0.00 0.00 2.74
565 603 0.944311 CGTCCAAGCGTTGCACTACT 60.944 55.000 0.00 0.00 0.00 2.57
566 604 0.942410 TCGTCCAAGCGTTGCACTAC 60.942 55.000 0.00 0.00 0.00 2.73
567 605 0.942410 GTCGTCCAAGCGTTGCACTA 60.942 55.000 0.00 0.00 0.00 2.74
568 606 2.108157 TCGTCCAAGCGTTGCACT 59.892 55.556 0.00 0.00 0.00 4.40
569 607 2.248431 GTCGTCCAAGCGTTGCAC 59.752 61.111 0.00 0.00 0.00 4.57
570 608 2.202946 TGTCGTCCAAGCGTTGCA 60.203 55.556 0.00 0.00 0.00 4.08
571 609 1.841663 ATGTGTCGTCCAAGCGTTGC 61.842 55.000 0.00 0.00 0.00 4.17
572 610 1.424403 TATGTGTCGTCCAAGCGTTG 58.576 50.000 0.00 0.00 0.00 4.10
573 611 2.066262 CTTATGTGTCGTCCAAGCGTT 58.934 47.619 0.00 0.00 0.00 4.84
574 612 1.271379 TCTTATGTGTCGTCCAAGCGT 59.729 47.619 0.00 0.00 0.00 5.07
575 613 1.990799 TCTTATGTGTCGTCCAAGCG 58.009 50.000 0.00 0.00 0.00 4.68
576 614 2.415512 GGTTCTTATGTGTCGTCCAAGC 59.584 50.000 0.00 0.00 0.00 4.01
577 615 3.659786 TGGTTCTTATGTGTCGTCCAAG 58.340 45.455 0.00 0.00 0.00 3.61
578 616 3.755112 TGGTTCTTATGTGTCGTCCAA 57.245 42.857 0.00 0.00 0.00 3.53
579 617 3.369052 GGATGGTTCTTATGTGTCGTCCA 60.369 47.826 0.00 0.00 32.31 4.02
580 618 3.195661 GGATGGTTCTTATGTGTCGTCC 58.804 50.000 0.00 0.00 0.00 4.79
581 619 3.857052 TGGATGGTTCTTATGTGTCGTC 58.143 45.455 0.00 0.00 0.00 4.20
582 620 3.973206 TGGATGGTTCTTATGTGTCGT 57.027 42.857 0.00 0.00 0.00 4.34
583 621 4.191544 ACATGGATGGTTCTTATGTGTCG 58.808 43.478 0.00 0.00 32.36 4.35
584 622 5.237344 GCTACATGGATGGTTCTTATGTGTC 59.763 44.000 0.00 0.00 34.14 3.67
585 623 5.126067 GCTACATGGATGGTTCTTATGTGT 58.874 41.667 0.00 0.00 34.14 3.72
648 686 9.743057 CTTTGGGTTCGCATGATATTAATTTAA 57.257 29.630 0.00 0.00 0.00 1.52
664 702 4.513442 TGATAAGTGGATCTTTGGGTTCG 58.487 43.478 0.00 0.00 37.56 3.95
666 704 5.779241 TCTGATAAGTGGATCTTTGGGTT 57.221 39.130 0.00 0.00 37.56 4.11
667 705 5.983333 ATCTGATAAGTGGATCTTTGGGT 57.017 39.130 0.00 0.00 37.56 4.51
729 770 6.847421 AAAGCATATCTTTCTTTGCCTCTT 57.153 33.333 0.00 0.00 40.89 2.85
744 785 3.956199 CAGGGTCACCAATGAAAGCATAT 59.044 43.478 0.00 0.00 40.13 1.78
753 794 3.443045 GGCGCAGGGTCACCAATG 61.443 66.667 10.83 0.00 40.13 2.82
769 810 3.085952 TCAGGGAGCAATAAAAGTGGG 57.914 47.619 0.00 0.00 0.00 4.61
807 848 3.510719 GCAGTTCAGTTGCTCAACAAAA 58.489 40.909 14.32 5.81 43.47 2.44
808 849 2.159254 GGCAGTTCAGTTGCTCAACAAA 60.159 45.455 14.32 6.12 43.47 2.83
809 850 1.405105 GGCAGTTCAGTTGCTCAACAA 59.595 47.619 14.32 0.00 43.47 2.83
810 851 1.024271 GGCAGTTCAGTTGCTCAACA 58.976 50.000 14.32 0.00 43.47 3.33
811 852 1.265365 GAGGCAGTTCAGTTGCTCAAC 59.735 52.381 4.67 4.67 41.27 3.18
812 853 1.141657 AGAGGCAGTTCAGTTGCTCAA 59.858 47.619 0.00 0.00 41.27 3.02
813 854 0.761187 AGAGGCAGTTCAGTTGCTCA 59.239 50.000 0.00 0.00 41.27 4.26
814 855 1.155042 CAGAGGCAGTTCAGTTGCTC 58.845 55.000 0.00 0.00 41.27 4.26
816 857 0.888285 AGCAGAGGCAGTTCAGTTGC 60.888 55.000 0.00 0.00 44.61 4.17
817 858 1.155042 GAGCAGAGGCAGTTCAGTTG 58.845 55.000 0.00 0.00 44.61 3.16
819 860 0.321021 CTGAGCAGAGGCAGTTCAGT 59.679 55.000 9.24 0.00 44.61 3.41
820 861 0.321021 ACTGAGCAGAGGCAGTTCAG 59.679 55.000 13.78 13.78 42.33 3.02
821 862 0.034476 CACTGAGCAGAGGCAGTTCA 59.966 55.000 4.21 0.00 42.33 3.18
824 865 1.370437 CACACTGAGCAGAGGCAGT 59.630 57.895 4.21 0.00 45.62 4.40
825 866 2.033755 GCACACTGAGCAGAGGCAG 61.034 63.158 4.21 0.00 44.61 4.85
826 867 2.031616 GCACACTGAGCAGAGGCA 59.968 61.111 4.21 0.00 44.61 4.75
827 868 1.168407 TTTGCACACTGAGCAGAGGC 61.168 55.000 4.21 5.36 43.75 4.70
828 869 1.311859 TTTTGCACACTGAGCAGAGG 58.688 50.000 4.21 0.00 43.75 3.69
830 871 2.090760 TGTTTTTGCACACTGAGCAGA 58.909 42.857 4.21 0.00 43.75 4.26
831 872 2.565210 TGTTTTTGCACACTGAGCAG 57.435 45.000 1.28 0.00 43.75 4.24
832 873 2.230992 ACTTGTTTTTGCACACTGAGCA 59.769 40.909 0.00 0.00 40.85 4.26
833 874 2.854185 GACTTGTTTTTGCACACTGAGC 59.146 45.455 0.00 0.00 0.00 4.26
834 875 4.095410 TGACTTGTTTTTGCACACTGAG 57.905 40.909 0.00 0.00 0.00 3.35
835 876 4.484236 CTTGACTTGTTTTTGCACACTGA 58.516 39.130 0.00 0.00 0.00 3.41
836 877 3.061161 GCTTGACTTGTTTTTGCACACTG 59.939 43.478 0.00 0.00 0.00 3.66
837 878 3.056607 AGCTTGACTTGTTTTTGCACACT 60.057 39.130 0.00 0.00 0.00 3.55
838 879 3.253230 AGCTTGACTTGTTTTTGCACAC 58.747 40.909 0.00 0.00 0.00 3.82
839 880 3.591196 AGCTTGACTTGTTTTTGCACA 57.409 38.095 0.00 0.00 0.00 4.57
840 881 6.401955 TTTTAGCTTGACTTGTTTTTGCAC 57.598 33.333 0.00 0.00 0.00 4.57
841 882 5.580297 CCTTTTAGCTTGACTTGTTTTTGCA 59.420 36.000 0.00 0.00 0.00 4.08
842 883 5.502382 GCCTTTTAGCTTGACTTGTTTTTGC 60.502 40.000 0.00 0.00 0.00 3.68
843 884 5.812127 AGCCTTTTAGCTTGACTTGTTTTTG 59.188 36.000 0.00 0.00 41.41 2.44
844 885 5.812127 CAGCCTTTTAGCTTGACTTGTTTTT 59.188 36.000 0.00 0.00 42.61 1.94
845 886 5.351458 CAGCCTTTTAGCTTGACTTGTTTT 58.649 37.500 0.00 0.00 42.61 2.43
846 887 4.737649 GCAGCCTTTTAGCTTGACTTGTTT 60.738 41.667 0.00 0.00 42.61 2.83
847 888 3.243535 GCAGCCTTTTAGCTTGACTTGTT 60.244 43.478 0.00 0.00 42.61 2.83
898 4519 1.228124 CAAACGAGGACCAGCCCAA 60.228 57.895 0.00 0.00 37.37 4.12
968 4617 3.810896 GGTTCGGCCAATGCGACC 61.811 66.667 2.24 0.00 38.85 4.79
984 4633 1.447838 CATCGGGTCCGTGAACTGG 60.448 63.158 9.36 0.00 40.74 4.00
988 4637 4.090588 GGCCATCGGGTCCGTGAA 62.091 66.667 9.36 0.00 40.74 3.18
1231 4952 6.172630 GCCAAAATACTGGAAATTTCACCAT 58.827 36.000 19.49 4.58 38.96 3.55
1267 4997 4.391216 CACCTGTGAAGTCATCAAGATGTC 59.609 45.833 9.66 4.77 40.50 3.06
1326 5056 0.107459 GGGAGGCCAGTGAGTCAATC 60.107 60.000 5.01 0.00 0.00 2.67
1364 5094 0.033504 CGCACCTTGTAGACAGTGGT 59.966 55.000 0.00 4.51 35.80 4.16
1365 5095 0.033504 ACGCACCTTGTAGACAGTGG 59.966 55.000 0.00 3.99 0.00 4.00
1461 5237 7.646130 GTCAGCAACTGTAATACTCATCTACTC 59.354 40.741 0.00 0.00 32.61 2.59
1462 5238 7.340743 AGTCAGCAACTGTAATACTCATCTACT 59.659 37.037 0.00 0.00 36.65 2.57
1463 5239 7.484975 AGTCAGCAACTGTAATACTCATCTAC 58.515 38.462 0.00 0.00 36.65 2.59
1464 5240 7.646548 AGTCAGCAACTGTAATACTCATCTA 57.353 36.000 0.00 0.00 36.65 1.98
1465 5241 6.537453 AGTCAGCAACTGTAATACTCATCT 57.463 37.500 0.00 0.00 36.65 2.90
1466 5242 6.813649 TCAAGTCAGCAACTGTAATACTCATC 59.186 38.462 0.00 0.00 38.58 2.92
1486 5262 2.292267 CCAAGTGAGCACAGTTCAAGT 58.708 47.619 0.77 0.00 37.54 3.16
1601 5421 3.423123 CGATGTTTACGTGGACAGCTTTC 60.423 47.826 15.90 0.00 30.43 2.62
1647 5467 4.381505 GCGACCAACATACATTTCCCAAAT 60.382 41.667 0.00 0.00 0.00 2.32
1662 5482 1.576356 GATCAGATGAGGCGACCAAC 58.424 55.000 0.00 0.00 0.00 3.77
1669 5489 3.699411 ATAAGCTGGATCAGATGAGGC 57.301 47.619 0.00 0.00 32.44 4.70
1673 5493 5.410746 ACGCAATAATAAGCTGGATCAGATG 59.589 40.000 0.00 0.00 32.44 2.90
1676 5496 4.083643 CCACGCAATAATAAGCTGGATCAG 60.084 45.833 0.00 0.00 33.64 2.90
1681 5501 3.489059 CCAACCACGCAATAATAAGCTGG 60.489 47.826 0.00 0.00 36.09 4.85
1685 5505 4.420168 CAACCCAACCACGCAATAATAAG 58.580 43.478 0.00 0.00 0.00 1.73
1686 5506 3.193691 CCAACCCAACCACGCAATAATAA 59.806 43.478 0.00 0.00 0.00 1.40
1687 5507 2.755655 CCAACCCAACCACGCAATAATA 59.244 45.455 0.00 0.00 0.00 0.98
1688 5508 1.548269 CCAACCCAACCACGCAATAAT 59.452 47.619 0.00 0.00 0.00 1.28
1762 5582 1.349627 CCAAGCGCGCAATACTCTG 59.650 57.895 35.10 16.67 0.00 3.35
1768 5588 4.054825 CCAACCCAAGCGCGCAAT 62.055 61.111 35.10 19.45 0.00 3.56
1773 5593 1.102978 ACATTATCCAACCCAAGCGC 58.897 50.000 0.00 0.00 0.00 5.92
1850 5672 6.093495 TCACTTGGTTGTCAAACAGAAGTAAG 59.907 38.462 7.48 2.58 37.94 2.34
1877 5699 7.119553 TGCATGCGATCATTTGCTTATCTATTA 59.880 33.333 14.09 0.00 33.01 0.98
1913 5736 2.621998 CAATAGCATGCTCCCCTTCTTG 59.378 50.000 26.57 12.93 0.00 3.02
1984 5807 5.506649 GGTGACCAATTTCTGTAGCGAAAAA 60.507 40.000 0.00 0.00 36.57 1.94
1985 5808 4.023536 GGTGACCAATTTCTGTAGCGAAAA 60.024 41.667 0.00 0.00 36.57 2.29
1986 5809 3.500680 GGTGACCAATTTCTGTAGCGAAA 59.499 43.478 0.00 0.00 37.31 3.46
1987 5810 3.071479 GGTGACCAATTTCTGTAGCGAA 58.929 45.455 0.00 0.00 0.00 4.70
1988 5811 2.301870 AGGTGACCAATTTCTGTAGCGA 59.698 45.455 3.63 0.00 0.00 4.93
1989 5812 2.416547 CAGGTGACCAATTTCTGTAGCG 59.583 50.000 3.63 0.00 0.00 4.26
1990 5813 3.674997 TCAGGTGACCAATTTCTGTAGC 58.325 45.455 3.63 0.00 0.00 3.58
1991 5814 5.248640 ACATCAGGTGACCAATTTCTGTAG 58.751 41.667 3.63 0.00 0.00 2.74
1992 5815 5.241403 ACATCAGGTGACCAATTTCTGTA 57.759 39.130 3.63 0.00 0.00 2.74
1993 5816 4.104383 ACATCAGGTGACCAATTTCTGT 57.896 40.909 3.63 0.00 0.00 3.41
2020 5843 1.989706 ACCCAACCACGCAATAAACT 58.010 45.000 0.00 0.00 0.00 2.66
2024 5847 1.982660 TCAAACCCAACCACGCAATA 58.017 45.000 0.00 0.00 0.00 1.90
2029 5852 0.387202 TTGCATCAAACCCAACCACG 59.613 50.000 0.00 0.00 0.00 4.94
2041 5864 2.725637 TGCTTATCCTGCTTTGCATCA 58.274 42.857 0.00 0.00 38.13 3.07
2045 5868 3.124128 GCTTTTTGCTTATCCTGCTTTGC 59.876 43.478 0.00 0.00 38.95 3.68
2051 5874 4.629251 GAGAGGCTTTTTGCTTATCCTG 57.371 45.455 0.00 0.00 42.39 3.86
2054 5877 3.356290 TGGGAGAGGCTTTTTGCTTATC 58.644 45.455 0.00 0.00 42.39 1.75
2057 5880 2.301009 CAATGGGAGAGGCTTTTTGCTT 59.699 45.455 0.00 0.00 42.39 3.91
2064 5887 2.269940 AGTGTACAATGGGAGAGGCTT 58.730 47.619 0.00 0.00 0.00 4.35
2067 5890 3.981071 TCAAGTGTACAATGGGAGAGG 57.019 47.619 0.00 0.00 0.00 3.69
2068 5891 6.820335 TCATATCAAGTGTACAATGGGAGAG 58.180 40.000 0.00 0.00 0.00 3.20
2073 5896 7.040892 CCCTGAATCATATCAAGTGTACAATGG 60.041 40.741 0.00 0.00 0.00 3.16
2078 5901 6.349300 ACACCCTGAATCATATCAAGTGTAC 58.651 40.000 9.66 0.00 41.44 2.90
2089 5913 1.167851 CACGCAACACCCTGAATCAT 58.832 50.000 0.00 0.00 0.00 2.45
2098 5922 3.137637 AAGCCAAGCACGCAACACC 62.138 57.895 0.00 0.00 0.00 4.16
2099 5923 1.945662 CAAGCCAAGCACGCAACAC 60.946 57.895 0.00 0.00 0.00 3.32
2101 5925 2.146073 ATCCAAGCCAAGCACGCAAC 62.146 55.000 0.00 0.00 0.00 4.17
2107 5931 1.714541 TTTTGGATCCAAGCCAAGCA 58.285 45.000 25.69 7.95 45.39 3.91
2114 5938 6.568462 GCGACCATATACATTTTGGATCCAAG 60.568 42.308 25.69 17.43 37.24 3.61
2124 5948 6.509418 ACAAACAAGCGACCATATACATTT 57.491 33.333 0.00 0.00 0.00 2.32
2125 5949 6.509418 AACAAACAAGCGACCATATACATT 57.491 33.333 0.00 0.00 0.00 2.71
2126 5950 6.321717 CAAACAAACAAGCGACCATATACAT 58.678 36.000 0.00 0.00 0.00 2.29
2138 5967 4.743493 TGAGAAAGACCAAACAAACAAGC 58.257 39.130 0.00 0.00 0.00 4.01
2145 5974 4.163441 TGACCATGAGAAAGACCAAACA 57.837 40.909 0.00 0.00 0.00 2.83
2200 6037 8.029522 TGCTTATCTATTATTCACTCGGTCATC 58.970 37.037 0.00 0.00 0.00 2.92
2225 6162 6.573617 AGAAAACTTGAAAGCGAACATTTG 57.426 33.333 0.00 0.00 0.00 2.32
2231 6172 7.254795 CCTTCTTCTAGAAAACTTGAAAGCGAA 60.255 37.037 6.63 1.56 33.19 4.70
2234 6175 6.294231 CCCCTTCTTCTAGAAAACTTGAAAGC 60.294 42.308 6.63 0.00 33.19 3.51
2236 6177 6.906848 TCCCCTTCTTCTAGAAAACTTGAAA 58.093 36.000 6.63 0.00 33.19 2.69
2238 6179 5.513267 GCTCCCCTTCTTCTAGAAAACTTGA 60.513 44.000 6.63 0.00 33.19 3.02
2239 6180 4.697828 GCTCCCCTTCTTCTAGAAAACTTG 59.302 45.833 6.63 0.00 33.19 3.16
2265 6206 4.607114 CGCTCGACATAAAAGCAGAATAGC 60.607 45.833 0.00 0.00 35.76 2.97
2271 6212 3.722555 TTTCGCTCGACATAAAAGCAG 57.277 42.857 0.00 0.00 35.76 4.24
2272 6213 3.682377 TGATTTCGCTCGACATAAAAGCA 59.318 39.130 0.00 0.00 35.76 3.91
2634 7198 0.962489 CGAGGTTCTCTCCACAGTGT 59.038 55.000 0.00 0.00 39.30 3.55
3027 7597 1.532868 CATACGAGCAGCCCAAATAGC 59.467 52.381 0.00 0.00 0.00 2.97
3114 7684 2.600470 GTGGGAGTTTGGGTGGCC 60.600 66.667 0.00 0.00 0.00 5.36
3118 7688 0.838608 TGTTACGTGGGAGTTTGGGT 59.161 50.000 0.00 0.00 0.00 4.51
3249 7819 2.945668 GTGTGCTCTGACCAGAAGTTTT 59.054 45.455 1.08 0.00 36.94 2.43
3466 8036 0.604780 TGCCAGAGCTGAAGTCTTGC 60.605 55.000 0.00 0.00 40.80 4.01
3485 8055 1.211457 GTCAGATGAGCCACCCAATCT 59.789 52.381 0.00 0.00 0.00 2.40
3518 8088 3.007398 ACAGAGAAGTTGAGGCGAAAGAT 59.993 43.478 0.00 0.00 0.00 2.40
3568 8138 8.246180 ACAAACAGAGCATAATTATCCAACTTG 58.754 33.333 0.00 0.00 0.00 3.16
3595 8165 2.646798 AGGATTCCTTCTGTCAAGGCTT 59.353 45.455 0.00 0.00 37.34 4.35
3703 8273 2.939261 AAACTCGACCGCGGTCCAT 61.939 57.895 43.58 29.79 41.76 3.41
3783 8353 4.946157 GGCTACTTAGTACACCACAGTCTA 59.054 45.833 0.00 0.00 0.00 2.59
3891 8509 4.703897 ACAGCTACAGAACTAGTTGCAAA 58.296 39.130 14.14 0.00 39.61 3.68
3988 8610 0.878416 TTCGCCACAATACAACCAGC 59.122 50.000 0.00 0.00 0.00 4.85
4008 8630 3.511146 AGATGACAAATGCAATCCCGTTT 59.489 39.130 0.00 0.00 0.00 3.60
4064 8686 2.008543 GCAGATGGTCGAAGCACATGA 61.009 52.381 0.00 0.00 0.00 3.07
4106 8730 3.934068 AGTACCCAGGTTACATTTGACG 58.066 45.455 0.00 0.00 0.00 4.35
4180 8853 6.427547 CCAATACCACAAACAATGAAAAGCAT 59.572 34.615 0.00 0.00 39.43 3.79
4181 8854 5.757320 CCAATACCACAAACAATGAAAAGCA 59.243 36.000 0.00 0.00 0.00 3.91
4182 8855 5.988561 TCCAATACCACAAACAATGAAAAGC 59.011 36.000 0.00 0.00 0.00 3.51
4183 8856 7.871973 TGATCCAATACCACAAACAATGAAAAG 59.128 33.333 0.00 0.00 0.00 2.27
4184 8857 7.730084 TGATCCAATACCACAAACAATGAAAA 58.270 30.769 0.00 0.00 0.00 2.29
4185 8858 7.295322 TGATCCAATACCACAAACAATGAAA 57.705 32.000 0.00 0.00 0.00 2.69
4186 8859 6.907853 TGATCCAATACCACAAACAATGAA 57.092 33.333 0.00 0.00 0.00 2.57
4187 8860 7.178097 TGAATGATCCAATACCACAAACAATGA 59.822 33.333 0.00 0.00 0.00 2.57
4188 8861 7.321908 TGAATGATCCAATACCACAAACAATG 58.678 34.615 0.00 0.00 0.00 2.82
4189 8862 7.479352 TGAATGATCCAATACCACAAACAAT 57.521 32.000 0.00 0.00 0.00 2.71
4190 8863 6.907853 TGAATGATCCAATACCACAAACAA 57.092 33.333 0.00 0.00 0.00 2.83
4191 8864 6.436847 ACATGAATGATCCAATACCACAAACA 59.563 34.615 0.00 0.00 0.00 2.83
4192 8865 6.866480 ACATGAATGATCCAATACCACAAAC 58.134 36.000 0.00 0.00 0.00 2.93
4193 8866 8.765488 ATACATGAATGATCCAATACCACAAA 57.235 30.769 0.00 0.00 0.00 2.83
4194 8867 8.631797 CAATACATGAATGATCCAATACCACAA 58.368 33.333 0.00 0.00 0.00 3.33
4195 8868 7.231115 CCAATACATGAATGATCCAATACCACA 59.769 37.037 0.00 0.00 0.00 4.17
4196 8869 7.448161 TCCAATACATGAATGATCCAATACCAC 59.552 37.037 0.00 0.00 0.00 4.16
4197 8870 7.525165 TCCAATACATGAATGATCCAATACCA 58.475 34.615 0.00 0.00 0.00 3.25
4198 8871 8.585471 ATCCAATACATGAATGATCCAATACC 57.415 34.615 0.00 0.00 0.00 2.73
4199 8872 9.234827 TGATCCAATACATGAATGATCCAATAC 57.765 33.333 0.00 0.00 0.00 1.89
4201 8874 8.749354 CATGATCCAATACATGAATGATCCAAT 58.251 33.333 0.00 0.00 44.28 3.16
4202 8875 7.177744 CCATGATCCAATACATGAATGATCCAA 59.822 37.037 0.00 0.00 44.28 3.53
4203 8876 6.661805 CCATGATCCAATACATGAATGATCCA 59.338 38.462 0.00 0.00 44.28 3.41
4204 8877 6.662234 ACCATGATCCAATACATGAATGATCC 59.338 38.462 0.00 0.00 44.28 3.36
4205 8878 7.362660 CCACCATGATCCAATACATGAATGATC 60.363 40.741 0.00 4.34 44.28 2.92
4206 8879 6.436218 CCACCATGATCCAATACATGAATGAT 59.564 38.462 0.00 0.00 44.28 2.45
4207 8880 5.771165 CCACCATGATCCAATACATGAATGA 59.229 40.000 0.00 0.00 44.28 2.57
4208 8881 5.537295 ACCACCATGATCCAATACATGAATG 59.463 40.000 0.00 0.00 44.28 2.67
4209 8882 5.708544 ACCACCATGATCCAATACATGAAT 58.291 37.500 0.00 0.00 44.28 2.57
4210 8883 5.128033 ACCACCATGATCCAATACATGAA 57.872 39.130 0.00 0.00 44.28 2.57
4211 8884 4.794311 ACCACCATGATCCAATACATGA 57.206 40.909 0.00 0.00 44.28 3.07
4212 8885 5.857471 AAACCACCATGATCCAATACATG 57.143 39.130 0.00 0.00 42.12 3.21
4213 8886 6.197168 AGAAAACCACCATGATCCAATACAT 58.803 36.000 0.00 0.00 0.00 2.29
4214 8887 5.579047 AGAAAACCACCATGATCCAATACA 58.421 37.500 0.00 0.00 0.00 2.29
4215 8888 6.332630 CAAGAAAACCACCATGATCCAATAC 58.667 40.000 0.00 0.00 0.00 1.89
4216 8889 5.105392 GCAAGAAAACCACCATGATCCAATA 60.105 40.000 0.00 0.00 0.00 1.90
4217 8890 4.322953 GCAAGAAAACCACCATGATCCAAT 60.323 41.667 0.00 0.00 0.00 3.16
4218 8891 3.006752 GCAAGAAAACCACCATGATCCAA 59.993 43.478 0.00 0.00 0.00 3.53
4219 8892 2.562298 GCAAGAAAACCACCATGATCCA 59.438 45.455 0.00 0.00 0.00 3.41
4220 8893 2.094026 GGCAAGAAAACCACCATGATCC 60.094 50.000 0.00 0.00 0.00 3.36
4224 8898 3.405823 AATGGCAAGAAAACCACCATG 57.594 42.857 0.00 0.00 40.20 3.66
4345 9038 9.656323 TCTTAGGCTGGAGATAATAAACTAAGA 57.344 33.333 0.00 0.00 40.60 2.10
4346 9039 9.699703 GTCTTAGGCTGGAGATAATAAACTAAG 57.300 37.037 0.00 0.00 37.36 2.18
4347 9040 9.435570 AGTCTTAGGCTGGAGATAATAAACTAA 57.564 33.333 0.00 0.00 0.00 2.24
4348 9041 8.861086 CAGTCTTAGGCTGGAGATAATAAACTA 58.139 37.037 5.85 0.00 0.00 2.24
4373 9066 4.141846 GCAGATCATCCTTCCAAGAGTACA 60.142 45.833 0.00 0.00 0.00 2.90
4374 9067 4.141846 TGCAGATCATCCTTCCAAGAGTAC 60.142 45.833 0.00 0.00 0.00 2.73
4384 9077 0.465824 GCAGGCTGCAGATCATCCTT 60.466 55.000 33.33 0.00 44.26 3.36
4434 9127 9.520204 AAAGTTCAGTCAAAAGACACATTAATG 57.480 29.630 14.01 14.01 0.00 1.90
4467 9160 1.142870 ACTGTTTTGCTGCCTCTACCA 59.857 47.619 0.00 0.00 0.00 3.25
4469 9162 3.990318 AAACTGTTTTGCTGCCTCTAC 57.010 42.857 0.00 0.00 0.00 2.59
4591 9285 0.323957 AAACGGAGGGAGTAGTTGGC 59.676 55.000 0.00 0.00 0.00 4.52
4597 9291 4.098894 AGTAATTCCAAACGGAGGGAGTA 58.901 43.478 0.00 0.00 34.02 2.59
4598 9292 2.910977 AGTAATTCCAAACGGAGGGAGT 59.089 45.455 0.00 0.00 34.02 3.85
4599 9293 3.629142 AGTAATTCCAAACGGAGGGAG 57.371 47.619 0.00 0.00 34.02 4.30
4600 9294 3.073356 ACAAGTAATTCCAAACGGAGGGA 59.927 43.478 0.00 0.00 32.88 4.20
4601 9295 3.418047 ACAAGTAATTCCAAACGGAGGG 58.582 45.455 0.00 0.00 32.88 4.30
4602 9296 3.124636 CGACAAGTAATTCCAAACGGAGG 59.875 47.826 0.00 0.00 32.88 4.30
4603 9297 3.424433 GCGACAAGTAATTCCAAACGGAG 60.424 47.826 0.00 0.00 32.88 4.63
4604 9298 2.481185 GCGACAAGTAATTCCAAACGGA 59.519 45.455 0.00 0.00 0.00 4.69
4605 9299 2.723618 CGCGACAAGTAATTCCAAACGG 60.724 50.000 0.00 0.00 0.00 4.44
4606 9300 2.156117 TCGCGACAAGTAATTCCAAACG 59.844 45.455 3.71 0.00 0.00 3.60
4607 9301 3.799137 TCGCGACAAGTAATTCCAAAC 57.201 42.857 3.71 0.00 0.00 2.93
4608 9302 4.815040 TTTCGCGACAAGTAATTCCAAA 57.185 36.364 9.15 0.00 0.00 3.28
4609 9303 4.815040 TTTTCGCGACAAGTAATTCCAA 57.185 36.364 9.15 0.00 0.00 3.53
4610 9304 4.378978 CCATTTTCGCGACAAGTAATTCCA 60.379 41.667 9.15 0.00 0.00 3.53
4611 9305 4.095610 CCATTTTCGCGACAAGTAATTCC 58.904 43.478 9.15 0.00 0.00 3.01
4612 9306 4.965062 TCCATTTTCGCGACAAGTAATTC 58.035 39.130 9.15 0.00 0.00 2.17
4613 9307 5.106317 ACATCCATTTTCGCGACAAGTAATT 60.106 36.000 9.15 0.00 0.00 1.40
4614 9308 4.394920 ACATCCATTTTCGCGACAAGTAAT 59.605 37.500 9.15 0.42 0.00 1.89
4615 9309 3.749088 ACATCCATTTTCGCGACAAGTAA 59.251 39.130 9.15 0.00 0.00 2.24
4616 9310 3.331150 ACATCCATTTTCGCGACAAGTA 58.669 40.909 9.15 0.00 0.00 2.24
4617 9311 2.151202 ACATCCATTTTCGCGACAAGT 58.849 42.857 9.15 0.00 0.00 3.16
4618 9312 2.900122 ACATCCATTTTCGCGACAAG 57.100 45.000 9.15 2.84 0.00 3.16
4619 9313 4.188462 AGATACATCCATTTTCGCGACAA 58.812 39.130 9.15 9.93 0.00 3.18
4620 9314 3.792401 AGATACATCCATTTTCGCGACA 58.208 40.909 9.15 0.00 0.00 4.35
4621 9315 5.220381 TCTAGATACATCCATTTTCGCGAC 58.780 41.667 9.15 0.00 0.00 5.19
4622 9316 5.447624 TCTAGATACATCCATTTTCGCGA 57.552 39.130 3.71 3.71 0.00 5.87
4623 9317 7.993821 ATATCTAGATACATCCATTTTCGCG 57.006 36.000 14.71 0.00 0.00 5.87
4651 9345 9.967346 CTCGAAAATGGATGTATCTAGAACTAA 57.033 33.333 0.00 0.00 0.00 2.24
4652 9346 9.350951 TCTCGAAAATGGATGTATCTAGAACTA 57.649 33.333 0.00 0.00 0.00 2.24
4653 9347 8.138712 GTCTCGAAAATGGATGTATCTAGAACT 58.861 37.037 0.00 0.00 0.00 3.01
4654 9348 7.921214 TGTCTCGAAAATGGATGTATCTAGAAC 59.079 37.037 0.00 0.00 0.00 3.01
4655 9349 8.007405 TGTCTCGAAAATGGATGTATCTAGAA 57.993 34.615 0.00 0.00 0.00 2.10
4656 9350 7.582667 TGTCTCGAAAATGGATGTATCTAGA 57.417 36.000 0.00 0.00 0.00 2.43
4657 9351 7.923344 ACTTGTCTCGAAAATGGATGTATCTAG 59.077 37.037 0.00 0.00 0.00 2.43
4658 9352 7.782049 ACTTGTCTCGAAAATGGATGTATCTA 58.218 34.615 0.00 0.00 0.00 1.98
4659 9353 6.644347 ACTTGTCTCGAAAATGGATGTATCT 58.356 36.000 0.00 0.00 0.00 1.98
4660 9354 6.910536 ACTTGTCTCGAAAATGGATGTATC 57.089 37.500 0.00 0.00 0.00 2.24
4661 9355 8.964476 ATTACTTGTCTCGAAAATGGATGTAT 57.036 30.769 0.00 0.00 0.00 2.29
4662 9356 8.786826 AATTACTTGTCTCGAAAATGGATGTA 57.213 30.769 0.00 0.00 0.00 2.29
4663 9357 7.148239 GGAATTACTTGTCTCGAAAATGGATGT 60.148 37.037 0.00 0.00 0.00 3.06
4664 9358 7.148255 TGGAATTACTTGTCTCGAAAATGGATG 60.148 37.037 0.00 0.00 0.00 3.51
4665 9359 6.884295 TGGAATTACTTGTCTCGAAAATGGAT 59.116 34.615 0.00 0.00 0.00 3.41
4666 9360 6.234920 TGGAATTACTTGTCTCGAAAATGGA 58.765 36.000 0.00 0.00 0.00 3.41
4667 9361 6.494893 TGGAATTACTTGTCTCGAAAATGG 57.505 37.500 0.00 0.00 0.00 3.16
4668 9362 7.059488 CGTTTGGAATTACTTGTCTCGAAAATG 59.941 37.037 0.00 0.00 0.00 2.32
4669 9363 7.075741 CGTTTGGAATTACTTGTCTCGAAAAT 58.924 34.615 0.00 0.00 0.00 1.82
4670 9364 6.423862 CGTTTGGAATTACTTGTCTCGAAAA 58.576 36.000 0.00 0.00 0.00 2.29
4671 9365 5.049954 CCGTTTGGAATTACTTGTCTCGAAA 60.050 40.000 0.00 0.00 37.49 3.46
4672 9366 4.449743 CCGTTTGGAATTACTTGTCTCGAA 59.550 41.667 0.00 0.00 37.49 3.71
4673 9367 3.991773 CCGTTTGGAATTACTTGTCTCGA 59.008 43.478 0.00 0.00 37.49 4.04
4674 9368 3.991773 TCCGTTTGGAATTACTTGTCTCG 59.008 43.478 0.00 0.00 42.85 4.04
4675 9369 4.392138 CCTCCGTTTGGAATTACTTGTCTC 59.608 45.833 0.00 0.00 45.87 3.36
4676 9370 4.324267 CCTCCGTTTGGAATTACTTGTCT 58.676 43.478 0.00 0.00 45.87 3.41
4677 9371 3.439129 CCCTCCGTTTGGAATTACTTGTC 59.561 47.826 0.00 0.00 45.87 3.18
4678 9372 3.073356 TCCCTCCGTTTGGAATTACTTGT 59.927 43.478 0.00 0.00 45.87 3.16
4679 9373 3.681593 TCCCTCCGTTTGGAATTACTTG 58.318 45.455 0.00 0.00 45.87 3.16
4680 9374 3.329814 ACTCCCTCCGTTTGGAATTACTT 59.670 43.478 0.00 0.00 45.87 2.24
4681 9375 2.910977 ACTCCCTCCGTTTGGAATTACT 59.089 45.455 0.00 0.00 45.87 2.24
4682 9376 3.345508 ACTCCCTCCGTTTGGAATTAC 57.654 47.619 0.00 0.00 45.87 1.89
4683 9377 4.098894 AGTACTCCCTCCGTTTGGAATTA 58.901 43.478 0.00 0.00 45.87 1.40
4684 9378 2.910977 AGTACTCCCTCCGTTTGGAATT 59.089 45.455 0.00 0.00 45.87 2.17
4685 9379 2.547990 AGTACTCCCTCCGTTTGGAAT 58.452 47.619 0.00 0.00 45.87 3.01
4686 9380 2.019807 AGTACTCCCTCCGTTTGGAA 57.980 50.000 0.00 0.00 45.87 3.53
4687 9381 2.019807 AAGTACTCCCTCCGTTTGGA 57.980 50.000 0.00 0.00 43.88 3.53
4688 9382 2.853235 AAAGTACTCCCTCCGTTTGG 57.147 50.000 0.00 0.00 0.00 3.28
4689 9383 3.735591 TGAAAAGTACTCCCTCCGTTTG 58.264 45.455 0.00 0.00 0.00 2.93
4690 9384 3.244457 CCTGAAAAGTACTCCCTCCGTTT 60.244 47.826 0.00 0.00 0.00 3.60
4691 9385 2.302157 CCTGAAAAGTACTCCCTCCGTT 59.698 50.000 0.00 0.00 0.00 4.44
4692 9386 1.900486 CCTGAAAAGTACTCCCTCCGT 59.100 52.381 0.00 0.00 0.00 4.69
4693 9387 2.176889 TCCTGAAAAGTACTCCCTCCG 58.823 52.381 0.00 0.00 0.00 4.63
4694 9388 3.326880 TGTTCCTGAAAAGTACTCCCTCC 59.673 47.826 0.00 0.00 0.00 4.30
4695 9389 4.618920 TGTTCCTGAAAAGTACTCCCTC 57.381 45.455 0.00 0.00 0.00 4.30
4696 9390 6.697641 TTATGTTCCTGAAAAGTACTCCCT 57.302 37.500 0.00 0.00 0.00 4.20
4697 9391 6.940867 AGTTTATGTTCCTGAAAAGTACTCCC 59.059 38.462 0.00 0.00 0.00 4.30
4698 9392 7.878644 AGAGTTTATGTTCCTGAAAAGTACTCC 59.121 37.037 0.00 0.00 0.00 3.85
4699 9393 8.834749 AGAGTTTATGTTCCTGAAAAGTACTC 57.165 34.615 0.00 0.00 0.00 2.59
4757 9451 0.672401 TAACCTTAGCGTGCACAGCC 60.672 55.000 23.57 9.88 34.64 4.85
4802 9496 2.005451 CATCTACAGACAGCACCTTGC 58.995 52.381 0.00 0.00 45.46 4.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.