Multiple sequence alignment - TraesCS5B01G525300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G525300 chr5B 100.000 3198 0 0 1 3198 685304187 685307384 0.000000e+00 5906.0
1 TraesCS5B01G525300 chr5B 98.503 668 10 0 1562 2229 685529131 685528464 0.000000e+00 1179.0
2 TraesCS5B01G525300 chr5B 93.926 675 17 7 898 1563 685529821 685529162 0.000000e+00 998.0
3 TraesCS5B01G525300 chr5B 93.750 272 12 3 2463 2734 685528462 685528196 1.380000e-108 403.0
4 TraesCS5B01G525300 chr5B 97.849 186 4 0 1 186 685294742 685294557 3.980000e-84 322.0
5 TraesCS5B01G525300 chr5B 88.843 242 16 5 2760 2994 685528210 685527973 1.450000e-73 287.0
6 TraesCS5B01G525300 chr5B 96.825 63 1 1 662 724 536475611 536475672 1.570000e-18 104.0
7 TraesCS5B01G525300 chr5B 100.000 39 0 0 724 762 655190 655152 4.430000e-09 73.1
8 TraesCS5B01G525300 chr5B 97.436 39 1 0 724 762 673364946 673364908 2.060000e-07 67.6
9 TraesCS5B01G525300 chr5D 92.986 1497 46 16 785 2229 543496147 543497636 0.000000e+00 2128.0
10 TraesCS5B01G525300 chr5D 86.329 395 19 14 2463 2844 543497638 543498010 6.430000e-107 398.0
11 TraesCS5B01G525300 chr5D 92.818 181 12 1 3018 3198 535806508 535806687 8.800000e-66 261.0
12 TraesCS5B01G525300 chr7B 95.733 539 14 2 188 725 574459835 574460365 0.000000e+00 859.0
13 TraesCS5B01G525300 chr7B 78.761 904 136 36 1322 2220 600589940 600590792 3.600000e-154 555.0
14 TraesCS5B01G525300 chr7B 75.382 1243 218 63 1004 2228 557491593 557490421 1.310000e-143 520.0
15 TraesCS5B01G525300 chr7B 74.614 1229 215 64 1022 2229 557257401 557256249 4.860000e-123 451.0
16 TraesCS5B01G525300 chr7B 97.849 186 4 0 1 186 147529726 147529541 3.980000e-84 322.0
17 TraesCS5B01G525300 chr7B 96.774 186 6 0 1 186 147530823 147531008 8.610000e-81 311.0
18 TraesCS5B01G525300 chr7B 94.475 181 10 0 3018 3198 5274099 5274279 2.430000e-71 279.0
19 TraesCS5B01G525300 chr7B 79.096 177 32 5 553 724 401049840 401050016 2.020000e-22 117.0
20 TraesCS5B01G525300 chr7B 93.651 63 3 1 665 727 610600412 610600351 3.400000e-15 93.5
21 TraesCS5B01G525300 chr1B 92.393 539 38 2 188 724 71637640 71638177 0.000000e+00 765.0
22 TraesCS5B01G525300 chr1B 86.381 536 51 10 188 712 72251161 72251685 1.670000e-157 566.0
23 TraesCS5B01G525300 chr1B 97.854 233 5 0 2231 2463 113213910 113214142 1.380000e-108 403.0
24 TraesCS5B01G525300 chr1B 96.121 232 9 0 2231 2462 40414090 40413859 2.330000e-101 379.0
25 TraesCS5B01G525300 chr7D 78.760 1210 186 48 1022 2220 554321914 554320765 0.000000e+00 745.0
26 TraesCS5B01G525300 chr7D 75.473 1215 202 68 1022 2220 523128113 523126979 3.680000e-139 505.0
27 TraesCS5B01G525300 chr7D 75.143 1223 220 56 1022 2228 523056992 523055838 6.160000e-137 497.0
28 TraesCS5B01G525300 chr7D 74.818 1235 230 51 1004 2228 500773766 500774929 1.730000e-132 483.0
29 TraesCS5B01G525300 chr7D 74.597 1240 233 57 1004 2228 523133800 523132628 1.340000e-128 470.0
30 TraesCS5B01G525300 chr7D 93.023 43 3 0 719 761 321229653 321229695 2.660000e-06 63.9
31 TraesCS5B01G525300 chr6B 89.981 539 51 2 188 724 72660968 72660431 0.000000e+00 693.0
32 TraesCS5B01G525300 chr6B 94.239 243 14 0 2221 2463 139467730 139467972 3.900000e-99 372.0
33 TraesCS5B01G525300 chr6B 89.850 266 27 0 188 453 72662365 72662100 3.050000e-90 342.0
34 TraesCS5B01G525300 chr7A 75.020 1237 233 56 1004 2228 603553246 603552074 1.320000e-138 503.0
35 TraesCS5B01G525300 chr7A 74.980 1223 222 56 1022 2228 603331633 603330479 1.330000e-133 486.0
36 TraesCS5B01G525300 chr7A 74.881 1262 213 67 1003 2228 19960378 19959185 2.230000e-131 479.0
37 TraesCS5B01G525300 chr7A 95.319 235 11 0 2229 2463 88975462 88975696 1.080000e-99 374.0
38 TraesCS5B01G525300 chr7A 93.548 186 11 1 1 186 603505894 603505710 3.140000e-70 276.0
39 TraesCS5B01G525300 chr7A 93.011 186 13 0 1 186 714028465 714028650 4.070000e-69 272.0
40 TraesCS5B01G525300 chr7A 88.953 172 19 0 2056 2227 603614626 603614455 2.500000e-51 213.0
41 TraesCS5B01G525300 chr7A 97.368 38 1 0 724 761 78828587 78828624 7.400000e-07 65.8
42 TraesCS5B01G525300 chr5A 99.571 233 1 0 2231 2463 553150271 553150039 2.950000e-115 425.0
43 TraesCS5B01G525300 chr5A 94.937 237 12 0 2227 2463 4045259 4045495 3.900000e-99 372.0
44 TraesCS5B01G525300 chr5A 94.915 236 12 0 2228 2463 87418710 87418945 1.400000e-98 370.0
45 TraesCS5B01G525300 chr5A 94.286 175 10 0 3024 3198 699846964 699847138 5.260000e-68 268.0
46 TraesCS5B01G525300 chr5A 93.714 175 11 0 3024 3198 699804200 699804374 2.450000e-66 263.0
47 TraesCS5B01G525300 chr6A 73.589 1276 249 57 1001 2228 496577639 496578874 2.970000e-110 409.0
48 TraesCS5B01G525300 chr6A 97.425 233 6 0 2231 2463 592013281 592013513 6.430000e-107 398.0
49 TraesCS5B01G525300 chr2B 96.154 234 9 0 2229 2462 733460651 733460884 1.800000e-102 383.0
50 TraesCS5B01G525300 chr2B 94.972 179 9 0 3018 3196 135168698 135168876 6.750000e-72 281.0
51 TraesCS5B01G525300 chr2B 93.370 181 12 0 3018 3198 794026822 794027002 5.260000e-68 268.0
52 TraesCS5B01G525300 chr4B 96.774 186 6 0 1 186 87429399 87429584 8.610000e-81 311.0
53 TraesCS5B01G525300 chr4B 90.278 72 7 0 653 724 672271846 672271917 9.440000e-16 95.3
54 TraesCS5B01G525300 chr3A 93.548 186 12 0 1 186 184665534 184665349 8.740000e-71 278.0
55 TraesCS5B01G525300 chr2D 94.475 181 9 1 3018 3198 585125018 585125197 8.740000e-71 278.0
56 TraesCS5B01G525300 chr2D 100.000 38 0 0 724 761 264819070 264819033 1.590000e-08 71.3
57 TraesCS5B01G525300 chr2D 97.368 38 1 0 724 761 131474813 131474776 7.400000e-07 65.8
58 TraesCS5B01G525300 chr1A 93.548 186 12 0 1 186 582558818 582559003 8.740000e-71 278.0
59 TraesCS5B01G525300 chr1A 92.708 192 12 2 1 191 434697893 434697703 3.140000e-70 276.0
60 TraesCS5B01G525300 chr1A 89.831 59 5 1 2066 2124 533154847 533154790 1.230000e-09 75.0
61 TraesCS5B01G525300 chr1D 93.923 181 11 0 3018 3198 32522541 32522721 1.130000e-69 274.0
62 TraesCS5B01G525300 chr2A 93.889 180 11 0 3019 3198 21225162 21225341 4.070000e-69 272.0
63 TraesCS5B01G525300 chr6D 72.513 975 215 36 1001 1928 346834313 346833345 1.890000e-67 267.0
64 TraesCS5B01G525300 chr3B 78.531 177 32 6 555 725 708607255 708607431 9.380000e-21 111.0
65 TraesCS5B01G525300 chr3B 90.000 70 7 0 651 720 14242405 14242336 1.220000e-14 91.6
66 TraesCS5B01G525300 chr3D 95.349 43 2 0 722 764 4970987 4970945 5.720000e-08 69.4
67 TraesCS5B01G525300 chr4A 97.368 38 1 0 724 761 631225891 631225854 7.400000e-07 65.8
68 TraesCS5B01G525300 chr4A 97.368 38 1 0 724 761 725799688 725799651 7.400000e-07 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G525300 chr5B 685304187 685307384 3197 False 5906.00 5906 100.0000 1 3198 1 chr5B.!!$F2 3197
1 TraesCS5B01G525300 chr5B 685527973 685529821 1848 True 716.75 1179 93.7555 898 2994 4 chr5B.!!$R4 2096
2 TraesCS5B01G525300 chr5D 543496147 543498010 1863 False 1263.00 2128 89.6575 785 2844 2 chr5D.!!$F2 2059
3 TraesCS5B01G525300 chr7B 574459835 574460365 530 False 859.00 859 95.7330 188 725 1 chr7B.!!$F4 537
4 TraesCS5B01G525300 chr7B 600589940 600590792 852 False 555.00 555 78.7610 1322 2220 1 chr7B.!!$F5 898
5 TraesCS5B01G525300 chr7B 557490421 557491593 1172 True 520.00 520 75.3820 1004 2228 1 chr7B.!!$R3 1224
6 TraesCS5B01G525300 chr7B 557256249 557257401 1152 True 451.00 451 74.6140 1022 2229 1 chr7B.!!$R2 1207
7 TraesCS5B01G525300 chr1B 71637640 71638177 537 False 765.00 765 92.3930 188 724 1 chr1B.!!$F1 536
8 TraesCS5B01G525300 chr1B 72251161 72251685 524 False 566.00 566 86.3810 188 712 1 chr1B.!!$F2 524
9 TraesCS5B01G525300 chr7D 554320765 554321914 1149 True 745.00 745 78.7600 1022 2220 1 chr7D.!!$R4 1198
10 TraesCS5B01G525300 chr7D 523126979 523128113 1134 True 505.00 505 75.4730 1022 2220 1 chr7D.!!$R2 1198
11 TraesCS5B01G525300 chr7D 523055838 523056992 1154 True 497.00 497 75.1430 1022 2228 1 chr7D.!!$R1 1206
12 TraesCS5B01G525300 chr7D 500773766 500774929 1163 False 483.00 483 74.8180 1004 2228 1 chr7D.!!$F2 1224
13 TraesCS5B01G525300 chr7D 523132628 523133800 1172 True 470.00 470 74.5970 1004 2228 1 chr7D.!!$R3 1224
14 TraesCS5B01G525300 chr6B 72660431 72662365 1934 True 517.50 693 89.9155 188 724 2 chr6B.!!$R1 536
15 TraesCS5B01G525300 chr7A 603552074 603553246 1172 True 503.00 503 75.0200 1004 2228 1 chr7A.!!$R4 1224
16 TraesCS5B01G525300 chr7A 603330479 603331633 1154 True 486.00 486 74.9800 1022 2228 1 chr7A.!!$R2 1206
17 TraesCS5B01G525300 chr7A 19959185 19960378 1193 True 479.00 479 74.8810 1003 2228 1 chr7A.!!$R1 1225
18 TraesCS5B01G525300 chr6A 496577639 496578874 1235 False 409.00 409 73.5890 1001 2228 1 chr6A.!!$F1 1227
19 TraesCS5B01G525300 chr6D 346833345 346834313 968 True 267.00 267 72.5130 1001 1928 1 chr6D.!!$R1 927

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
694 1935 0.107312 CGACGTAAGAGGGGAGAGGA 60.107 60.0 0.0 0.0 43.62 3.71 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2243 3678 0.319469 AAATCCACTTTTTGCGGCCG 60.319 50.0 24.05 24.05 0.0 6.13 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
64 65 4.680237 TTCGTGGAGTGGCGGCAG 62.680 66.667 13.91 0.00 0.00 4.85
70 71 4.314440 GAGTGGCGGCAGGTGACA 62.314 66.667 13.91 0.00 0.00 3.58
71 72 4.626081 AGTGGCGGCAGGTGACAC 62.626 66.667 13.91 0.00 0.00 3.67
76 77 3.036084 CGGCAGGTGACACGTGTC 61.036 66.667 36.01 36.01 44.97 3.67
112 113 1.679898 CCACTTGTGAGGGGGTCTC 59.320 63.158 1.89 0.00 43.23 3.36
113 114 0.838122 CCACTTGTGAGGGGGTCTCT 60.838 60.000 1.89 0.00 43.23 3.10
114 115 1.059913 CACTTGTGAGGGGGTCTCTT 58.940 55.000 0.00 0.00 42.86 2.85
115 116 1.421646 CACTTGTGAGGGGGTCTCTTT 59.578 52.381 0.00 0.00 42.86 2.52
116 117 2.136026 ACTTGTGAGGGGGTCTCTTTT 58.864 47.619 0.00 0.00 42.86 2.27
118 119 1.518367 TGTGAGGGGGTCTCTTTTGT 58.482 50.000 0.00 0.00 42.86 2.83
119 120 1.420138 TGTGAGGGGGTCTCTTTTGTC 59.580 52.381 0.00 0.00 42.86 3.18
120 121 1.420138 GTGAGGGGGTCTCTTTTGTCA 59.580 52.381 0.00 0.00 42.86 3.58
121 122 2.131854 TGAGGGGGTCTCTTTTGTCAA 58.868 47.619 0.00 0.00 42.86 3.18
122 123 2.716424 TGAGGGGGTCTCTTTTGTCAAT 59.284 45.455 0.00 0.00 42.86 2.57
123 124 3.140144 TGAGGGGGTCTCTTTTGTCAATT 59.860 43.478 0.00 0.00 42.86 2.32
124 125 4.152647 GAGGGGGTCTCTTTTGTCAATTT 58.847 43.478 0.00 0.00 39.38 1.82
125 126 4.152647 AGGGGGTCTCTTTTGTCAATTTC 58.847 43.478 0.00 0.00 0.00 2.17
126 127 3.057526 GGGGGTCTCTTTTGTCAATTTCG 60.058 47.826 0.00 0.00 0.00 3.46
127 128 3.568430 GGGGTCTCTTTTGTCAATTTCGT 59.432 43.478 0.00 0.00 0.00 3.85
128 129 4.320275 GGGGTCTCTTTTGTCAATTTCGTC 60.320 45.833 0.00 0.00 0.00 4.20
130 131 4.455124 GTCTCTTTTGTCAATTTCGTCCG 58.545 43.478 0.00 0.00 0.00 4.79
132 133 2.614520 TCTTTTGTCAATTTCGTCCGCA 59.385 40.909 0.00 0.00 0.00 5.69
133 134 2.679355 TTTGTCAATTTCGTCCGCAG 57.321 45.000 0.00 0.00 0.00 5.18
146 147 3.263941 CGCAGGGGGTCTTTTTCG 58.736 61.111 0.00 0.00 0.00 3.46
147 148 2.332654 CGCAGGGGGTCTTTTTCGG 61.333 63.158 0.00 0.00 0.00 4.30
148 149 2.636412 GCAGGGGGTCTTTTTCGGC 61.636 63.158 0.00 0.00 0.00 5.54
150 151 0.825840 CAGGGGGTCTTTTTCGGCAA 60.826 55.000 0.00 0.00 0.00 4.52
151 152 0.114364 AGGGGGTCTTTTTCGGCAAT 59.886 50.000 0.00 0.00 0.00 3.56
152 153 0.973632 GGGGGTCTTTTTCGGCAATT 59.026 50.000 0.00 0.00 0.00 2.32
153 154 1.067142 GGGGGTCTTTTTCGGCAATTC 60.067 52.381 0.00 0.00 0.00 2.17
154 155 1.067142 GGGGTCTTTTTCGGCAATTCC 60.067 52.381 0.00 0.00 0.00 3.01
155 156 1.616374 GGGTCTTTTTCGGCAATTCCA 59.384 47.619 0.00 0.00 34.01 3.53
157 158 2.296190 GGTCTTTTTCGGCAATTCCAGT 59.704 45.455 0.00 0.00 34.01 4.00
158 159 3.565516 GTCTTTTTCGGCAATTCCAGTC 58.434 45.455 0.00 0.00 34.01 3.51
159 160 2.225491 TCTTTTTCGGCAATTCCAGTCG 59.775 45.455 0.00 0.00 34.99 4.18
160 161 0.878416 TTTTCGGCAATTCCAGTCGG 59.122 50.000 0.00 0.00 34.34 4.79
161 162 1.582610 TTTCGGCAATTCCAGTCGGC 61.583 55.000 0.00 0.00 34.34 5.54
162 163 2.739849 TTCGGCAATTCCAGTCGGCA 62.740 55.000 0.00 0.00 34.34 5.69
164 165 1.377202 GGCAATTCCAGTCGGCAGA 60.377 57.895 0.00 0.00 34.01 4.26
166 167 1.372087 GCAATTCCAGTCGGCAGAGG 61.372 60.000 0.00 0.00 0.00 3.69
167 168 0.745845 CAATTCCAGTCGGCAGAGGG 60.746 60.000 0.00 0.00 0.00 4.30
168 169 1.201429 AATTCCAGTCGGCAGAGGGT 61.201 55.000 4.74 0.00 0.00 4.34
169 170 1.617947 ATTCCAGTCGGCAGAGGGTC 61.618 60.000 4.74 0.00 0.00 4.46
170 171 2.681778 CCAGTCGGCAGAGGGTCT 60.682 66.667 0.00 0.00 0.00 3.85
171 172 2.716017 CCAGTCGGCAGAGGGTCTC 61.716 68.421 0.00 0.00 0.00 3.36
172 173 1.680651 CAGTCGGCAGAGGGTCTCT 60.681 63.158 0.00 0.00 42.11 3.10
174 175 0.543174 AGTCGGCAGAGGGTCTCTTT 60.543 55.000 0.00 0.00 38.99 2.52
176 177 1.153745 CGGCAGAGGGTCTCTTTCG 60.154 63.158 0.00 0.00 38.99 3.46
177 178 1.595993 CGGCAGAGGGTCTCTTTCGA 61.596 60.000 9.51 0.00 38.99 3.71
179 180 0.603569 GCAGAGGGTCTCTTTCGACA 59.396 55.000 0.00 0.00 38.99 4.35
181 182 2.548067 GCAGAGGGTCTCTTTCGACAAA 60.548 50.000 0.00 0.00 38.99 2.83
183 184 4.127171 CAGAGGGTCTCTTTCGACAAAAA 58.873 43.478 0.00 0.00 38.99 1.94
694 1935 0.107312 CGACGTAAGAGGGGAGAGGA 60.107 60.000 0.00 0.00 43.62 3.71
758 1999 9.853177 ACACCTTATATAAAGAAATGAAGGGAG 57.147 33.333 0.00 0.00 36.99 4.30
759 2000 9.853177 CACCTTATATAAAGAAATGAAGGGAGT 57.147 33.333 0.00 0.00 36.99 3.85
766 2007 6.394345 AAAGAAATGAAGGGAGTATGACCT 57.606 37.500 0.00 0.00 39.21 3.85
768 2009 5.749462 AGAAATGAAGGGAGTATGACCTTG 58.251 41.667 0.00 0.00 46.64 3.61
769 2010 3.567478 ATGAAGGGAGTATGACCTTGC 57.433 47.619 0.00 0.00 46.64 4.01
770 2011 2.265367 TGAAGGGAGTATGACCTTGCA 58.735 47.619 0.00 0.00 46.64 4.08
771 2012 2.846206 TGAAGGGAGTATGACCTTGCAT 59.154 45.455 0.00 0.00 46.64 3.96
772 2013 3.266772 TGAAGGGAGTATGACCTTGCATT 59.733 43.478 0.00 0.00 46.64 3.56
773 2014 3.287867 AGGGAGTATGACCTTGCATTG 57.712 47.619 0.00 0.00 31.68 2.82
774 2015 2.578021 AGGGAGTATGACCTTGCATTGT 59.422 45.455 0.00 0.00 31.68 2.71
775 2016 3.010584 AGGGAGTATGACCTTGCATTGTT 59.989 43.478 0.00 0.00 31.68 2.83
776 2017 4.227300 AGGGAGTATGACCTTGCATTGTTA 59.773 41.667 0.00 0.00 31.68 2.41
777 2018 5.103940 AGGGAGTATGACCTTGCATTGTTAT 60.104 40.000 0.00 0.00 31.68 1.89
778 2019 5.594317 GGGAGTATGACCTTGCATTGTTATT 59.406 40.000 0.00 0.00 0.00 1.40
779 2020 6.460123 GGGAGTATGACCTTGCATTGTTATTG 60.460 42.308 0.00 0.00 0.00 1.90
780 2021 5.894807 AGTATGACCTTGCATTGTTATTGC 58.105 37.500 0.00 0.00 40.55 3.56
781 2022 5.653769 AGTATGACCTTGCATTGTTATTGCT 59.346 36.000 0.00 0.00 40.77 3.91
782 2023 6.828273 AGTATGACCTTGCATTGTTATTGCTA 59.172 34.615 0.00 0.00 40.77 3.49
783 2024 5.309323 TGACCTTGCATTGTTATTGCTAC 57.691 39.130 0.00 0.00 40.77 3.58
872 2125 5.649782 AGCCAAATCAGTGAGTAAATTGG 57.350 39.130 14.96 14.96 39.02 3.16
874 2127 4.747810 CCAAATCAGTGAGTAAATTGGCC 58.252 43.478 0.00 0.00 30.59 5.36
971 2233 1.067416 CGAGGCGCCATTAGCTACA 59.933 57.895 31.54 0.00 40.39 2.74
972 2234 0.529773 CGAGGCGCCATTAGCTACAA 60.530 55.000 31.54 0.00 40.39 2.41
973 2235 1.221414 GAGGCGCCATTAGCTACAAG 58.779 55.000 31.54 0.00 40.39 3.16
974 2236 0.830648 AGGCGCCATTAGCTACAAGA 59.169 50.000 31.54 0.00 40.39 3.02
981 2243 4.376146 GCCATTAGCTACAAGAGAAGAGG 58.624 47.826 0.00 0.00 38.99 3.69
1246 2544 1.142748 GAGCTCGTGGAGTCCATGG 59.857 63.158 27.58 19.65 40.65 3.66
1551 2912 4.673298 CCGCGTGTAGTGCCACCA 62.673 66.667 4.92 0.00 31.47 4.17
1557 2918 2.033602 GTAGTGCCACCACCACCC 59.966 66.667 0.00 0.00 43.09 4.61
1639 3035 0.108138 GGGCGCTGATACTCAACACT 60.108 55.000 7.64 0.00 0.00 3.55
2237 3672 4.614673 GCGTGTGCCTCTGTTTTG 57.385 55.556 0.00 0.00 33.98 2.44
2238 3673 2.021722 GCGTGTGCCTCTGTTTTGA 58.978 52.632 0.00 0.00 33.98 2.69
2239 3674 0.593128 GCGTGTGCCTCTGTTTTGAT 59.407 50.000 0.00 0.00 33.98 2.57
2240 3675 1.001378 GCGTGTGCCTCTGTTTTGATT 60.001 47.619 0.00 0.00 33.98 2.57
2241 3676 2.543653 GCGTGTGCCTCTGTTTTGATTT 60.544 45.455 0.00 0.00 33.98 2.17
2242 3677 3.705604 CGTGTGCCTCTGTTTTGATTTT 58.294 40.909 0.00 0.00 0.00 1.82
2243 3678 3.730715 CGTGTGCCTCTGTTTTGATTTTC 59.269 43.478 0.00 0.00 0.00 2.29
2244 3679 3.730715 GTGTGCCTCTGTTTTGATTTTCG 59.269 43.478 0.00 0.00 0.00 3.46
2245 3680 3.243367 TGTGCCTCTGTTTTGATTTTCGG 60.243 43.478 0.00 0.00 0.00 4.30
2246 3681 2.288152 TGCCTCTGTTTTGATTTTCGGC 60.288 45.455 0.00 0.00 35.67 5.54
2247 3682 2.926586 GCCTCTGTTTTGATTTTCGGCC 60.927 50.000 0.00 0.00 0.00 6.13
2248 3683 2.584791 CTCTGTTTTGATTTTCGGCCG 58.415 47.619 22.12 22.12 0.00 6.13
2249 3684 1.059942 CTGTTTTGATTTTCGGCCGC 58.940 50.000 23.51 6.50 0.00 6.53
2250 3685 0.385751 TGTTTTGATTTTCGGCCGCA 59.614 45.000 23.51 6.92 0.00 5.69
2251 3686 1.202417 TGTTTTGATTTTCGGCCGCAA 60.202 42.857 23.51 14.89 0.00 4.85
2252 3687 1.861575 GTTTTGATTTTCGGCCGCAAA 59.138 42.857 24.67 24.67 0.00 3.68
2253 3688 2.225068 TTTGATTTTCGGCCGCAAAA 57.775 40.000 26.06 26.26 0.00 2.44
2254 3689 2.225068 TTGATTTTCGGCCGCAAAAA 57.775 40.000 26.06 24.01 0.00 1.94
2255 3690 1.777101 TGATTTTCGGCCGCAAAAAG 58.223 45.000 26.06 0.00 0.00 2.27
2256 3691 1.067821 TGATTTTCGGCCGCAAAAAGT 59.932 42.857 26.06 15.45 0.00 2.66
2257 3692 1.455408 GATTTTCGGCCGCAAAAAGTG 59.545 47.619 26.06 0.00 0.00 3.16
2266 3701 1.059942 CGCAAAAAGTGGATTTCGGC 58.940 50.000 0.00 0.00 0.00 5.54
2267 3702 1.428448 GCAAAAAGTGGATTTCGGCC 58.572 50.000 0.00 0.00 0.00 6.13
2268 3703 1.696988 CAAAAAGTGGATTTCGGCCG 58.303 50.000 22.12 22.12 0.00 6.13
2269 3704 1.268352 CAAAAAGTGGATTTCGGCCGA 59.732 47.619 27.28 27.28 0.00 5.54
2270 3705 1.611519 AAAAGTGGATTTCGGCCGAA 58.388 45.000 35.81 35.81 0.00 4.30
2271 3706 1.834188 AAAGTGGATTTCGGCCGAAT 58.166 45.000 38.89 27.72 33.79 3.34
2272 3707 1.834188 AAGTGGATTTCGGCCGAATT 58.166 45.000 38.89 34.04 33.79 2.17
2273 3708 1.834188 AGTGGATTTCGGCCGAATTT 58.166 45.000 38.89 28.86 33.79 1.82
2274 3709 1.743394 AGTGGATTTCGGCCGAATTTC 59.257 47.619 38.89 33.33 33.79 2.17
2275 3710 0.730265 TGGATTTCGGCCGAATTTCG 59.270 50.000 38.89 11.81 40.07 3.46
2285 3720 1.934463 CGAATTTCGGCCATCTCGG 59.066 57.895 10.95 0.00 36.00 4.63
2306 3741 3.467803 GCCTGAGGCGAAAAGTATATGT 58.532 45.455 8.16 0.00 39.62 2.29
2307 3742 4.628074 GCCTGAGGCGAAAAGTATATGTA 58.372 43.478 8.16 0.00 39.62 2.29
2308 3743 4.686554 GCCTGAGGCGAAAAGTATATGTAG 59.313 45.833 8.16 0.00 39.62 2.74
2309 3744 5.230942 CCTGAGGCGAAAAGTATATGTAGG 58.769 45.833 0.00 0.00 0.00 3.18
2310 3745 4.628074 TGAGGCGAAAAGTATATGTAGGC 58.372 43.478 0.00 0.00 0.00 3.93
2311 3746 3.995048 GAGGCGAAAAGTATATGTAGGCC 59.005 47.826 0.00 0.00 38.29 5.19
2312 3747 3.389983 AGGCGAAAAGTATATGTAGGCCA 59.610 43.478 5.01 0.00 40.40 5.36
2313 3748 4.131596 GGCGAAAAGTATATGTAGGCCAA 58.868 43.478 5.01 0.00 37.93 4.52
2314 3749 4.577283 GGCGAAAAGTATATGTAGGCCAAA 59.423 41.667 5.01 0.00 37.93 3.28
2315 3750 5.066764 GGCGAAAAGTATATGTAGGCCAAAA 59.933 40.000 5.01 0.00 37.93 2.44
2316 3751 6.238925 GGCGAAAAGTATATGTAGGCCAAAAT 60.239 38.462 5.01 0.00 37.93 1.82
2317 3752 7.200455 GCGAAAAGTATATGTAGGCCAAAATT 58.800 34.615 5.01 0.00 0.00 1.82
2318 3753 7.167468 GCGAAAAGTATATGTAGGCCAAAATTG 59.833 37.037 5.01 0.00 0.00 2.32
2336 3771 9.583765 CCAAAATTGGTGAAATTTGACAAATTT 57.416 25.926 29.96 29.96 45.73 1.82
2359 3794 9.949174 ATTTTGGTCAAATTTAAGTCAAATTGC 57.051 25.926 0.00 0.00 44.37 3.56
2360 3795 8.498054 TTTGGTCAAATTTAAGTCAAATTGCA 57.502 26.923 0.00 0.00 44.37 4.08
2361 3796 7.712264 TGGTCAAATTTAAGTCAAATTGCAG 57.288 32.000 0.00 0.00 44.37 4.41
2362 3797 7.271511 TGGTCAAATTTAAGTCAAATTGCAGT 58.728 30.769 0.00 0.00 44.37 4.40
2363 3798 7.437862 TGGTCAAATTTAAGTCAAATTGCAGTC 59.562 33.333 0.00 0.00 44.37 3.51
2364 3799 7.437862 GGTCAAATTTAAGTCAAATTGCAGTCA 59.562 33.333 0.00 0.00 44.37 3.41
2365 3800 8.816144 GTCAAATTTAAGTCAAATTGCAGTCAA 58.184 29.630 0.00 0.00 44.37 3.18
2366 3801 9.376075 TCAAATTTAAGTCAAATTGCAGTCAAA 57.624 25.926 0.00 0.00 44.37 2.69
2367 3802 9.985318 CAAATTTAAGTCAAATTGCAGTCAAAA 57.015 25.926 0.00 0.00 44.37 2.44
2372 3807 6.607735 AGTCAAATTGCAGTCAAAATTTGG 57.392 33.333 15.66 0.00 46.53 3.28
2373 3808 6.114767 AGTCAAATTGCAGTCAAAATTTGGT 58.885 32.000 15.66 5.01 46.53 3.67
2374 3809 6.598850 AGTCAAATTGCAGTCAAAATTTGGTT 59.401 30.769 15.66 5.52 46.53 3.67
2375 3810 7.768120 AGTCAAATTGCAGTCAAAATTTGGTTA 59.232 29.630 15.66 0.00 46.53 2.85
2376 3811 8.394121 GTCAAATTGCAGTCAAAATTTGGTTAA 58.606 29.630 15.66 0.00 46.53 2.01
2377 3812 8.950210 TCAAATTGCAGTCAAAATTTGGTTAAA 58.050 25.926 15.66 0.00 46.53 1.52
2378 3813 9.733219 CAAATTGCAGTCAAAATTTGGTTAAAT 57.267 25.926 5.83 0.00 44.46 1.40
2402 3837 5.921004 TCAGCCGAAATTTTTGAAAATGG 57.079 34.783 2.71 2.11 38.53 3.16
2403 3838 4.213059 TCAGCCGAAATTTTTGAAAATGGC 59.787 37.500 15.69 15.69 41.56 4.40
2404 3839 3.501828 AGCCGAAATTTTTGAAAATGGCC 59.498 39.130 18.09 0.00 41.89 5.36
2405 3840 3.666638 GCCGAAATTTTTGAAAATGGCCG 60.667 43.478 13.79 11.43 38.25 6.13
2406 3841 3.743396 CCGAAATTTTTGAAAATGGCCGA 59.257 39.130 0.00 0.00 38.53 5.54
2407 3842 4.212214 CCGAAATTTTTGAAAATGGCCGAA 59.788 37.500 0.00 0.00 38.53 4.30
2408 3843 5.277538 CCGAAATTTTTGAAAATGGCCGAAA 60.278 36.000 0.00 0.00 38.53 3.46
2409 3844 6.369799 CGAAATTTTTGAAAATGGCCGAAAT 58.630 32.000 0.00 0.00 38.53 2.17
2410 3845 6.855403 CGAAATTTTTGAAAATGGCCGAAATT 59.145 30.769 0.00 0.00 38.53 1.82
2411 3846 7.059374 CGAAATTTTTGAAAATGGCCGAAATTC 59.941 33.333 0.00 0.56 38.53 2.17
2412 3847 4.981389 TTTTGAAAATGGCCGAAATTCG 57.019 36.364 8.62 8.62 40.07 3.34
2422 3857 1.934463 CGAAATTCGGCCATCTCGG 59.066 57.895 7.61 0.00 36.00 4.63
2423 3858 0.810031 CGAAATTCGGCCATCTCGGT 60.810 55.000 7.61 0.00 36.00 4.69
2424 3859 0.938008 GAAATTCGGCCATCTCGGTC 59.062 55.000 2.24 0.00 36.97 4.79
2425 3860 0.541863 AAATTCGGCCATCTCGGTCT 59.458 50.000 2.24 0.00 37.17 3.85
2426 3861 1.410004 AATTCGGCCATCTCGGTCTA 58.590 50.000 2.24 0.00 37.17 2.59
2427 3862 0.962489 ATTCGGCCATCTCGGTCTAG 59.038 55.000 2.24 0.00 37.17 2.43
2428 3863 1.107538 TTCGGCCATCTCGGTCTAGG 61.108 60.000 2.24 0.00 37.17 3.02
2429 3864 2.565645 CGGCCATCTCGGTCTAGGG 61.566 68.421 2.24 0.00 37.17 3.53
2430 3865 2.737830 GCCATCTCGGTCTAGGGC 59.262 66.667 0.00 0.00 36.97 5.19
2431 3866 3.043419 CCATCTCGGTCTAGGGCG 58.957 66.667 0.00 0.00 0.00 6.13
2432 3867 1.528542 CCATCTCGGTCTAGGGCGA 60.529 63.158 0.00 0.00 0.00 5.54
2433 3868 1.107538 CCATCTCGGTCTAGGGCGAA 61.108 60.000 0.00 0.00 0.00 4.70
2434 3869 0.744874 CATCTCGGTCTAGGGCGAAA 59.255 55.000 0.00 0.00 0.00 3.46
2435 3870 1.136305 CATCTCGGTCTAGGGCGAAAA 59.864 52.381 0.00 0.00 0.00 2.29
2436 3871 1.259609 TCTCGGTCTAGGGCGAAAAA 58.740 50.000 0.00 0.00 0.00 1.94
2457 3892 6.976636 AAAAAGCTCAAACCGAAAATCAAA 57.023 29.167 0.00 0.00 0.00 2.69
2458 3893 6.976636 AAAAGCTCAAACCGAAAATCAAAA 57.023 29.167 0.00 0.00 0.00 2.44
2459 3894 5.966636 AAGCTCAAACCGAAAATCAAAAC 57.033 34.783 0.00 0.00 0.00 2.43
2460 3895 5.004922 AGCTCAAACCGAAAATCAAAACA 57.995 34.783 0.00 0.00 0.00 2.83
2461 3896 4.803613 AGCTCAAACCGAAAATCAAAACAC 59.196 37.500 0.00 0.00 0.00 3.32
2508 3943 2.367512 AGGCCATGGAGTCCCCTC 60.368 66.667 18.40 0.00 36.96 4.30
2597 4032 3.311110 TCCGAGTTGGAGCGCCTT 61.311 61.111 8.34 0.00 43.74 4.35
2628 4063 3.767806 CCGAGCTCAGCCTCAGCA 61.768 66.667 15.40 0.00 43.56 4.41
2666 4101 2.164865 CTGCTCCCGCTCTCACTTGT 62.165 60.000 0.00 0.00 36.97 3.16
2668 4103 1.294659 GCTCCCGCTCTCACTTGTTG 61.295 60.000 0.00 0.00 0.00 3.33
2669 4104 0.318441 CTCCCGCTCTCACTTGTTGA 59.682 55.000 0.00 0.00 0.00 3.18
2670 4105 0.976641 TCCCGCTCTCACTTGTTGAT 59.023 50.000 0.00 0.00 32.17 2.57
2672 4107 2.154462 CCCGCTCTCACTTGTTGATTT 58.846 47.619 0.00 0.00 32.17 2.17
2708 4152 2.939103 GCTGTAATAAGAGGTGGTGCAG 59.061 50.000 0.00 0.00 0.00 4.41
2726 4170 2.987547 GTGCATGCAGCCACCAGT 60.988 61.111 23.41 0.00 44.83 4.00
2727 4171 1.675310 GTGCATGCAGCCACCAGTA 60.675 57.895 23.41 0.00 44.83 2.74
2728 4172 1.675310 TGCATGCAGCCACCAGTAC 60.675 57.895 18.46 0.00 44.83 2.73
2729 4173 1.377725 GCATGCAGCCACCAGTACT 60.378 57.895 14.21 0.00 37.23 2.73
2730 4174 1.651240 GCATGCAGCCACCAGTACTG 61.651 60.000 16.34 16.34 37.23 2.74
2731 4175 0.321919 CATGCAGCCACCAGTACTGT 60.322 55.000 21.18 7.09 33.87 3.55
2732 4176 0.036010 ATGCAGCCACCAGTACTGTC 60.036 55.000 21.18 7.68 33.87 3.51
2733 4177 1.121407 TGCAGCCACCAGTACTGTCT 61.121 55.000 21.18 9.69 33.87 3.41
2734 4178 0.035458 GCAGCCACCAGTACTGTCTT 59.965 55.000 21.18 2.70 33.87 3.01
2735 4179 1.543429 GCAGCCACCAGTACTGTCTTT 60.543 52.381 21.18 0.16 33.87 2.52
2736 4180 2.851195 CAGCCACCAGTACTGTCTTTT 58.149 47.619 21.18 1.70 0.00 2.27
2737 4181 2.549754 CAGCCACCAGTACTGTCTTTTG 59.450 50.000 21.18 10.14 0.00 2.44
2738 4182 2.172717 AGCCACCAGTACTGTCTTTTGT 59.827 45.455 21.18 8.14 0.00 2.83
2743 4187 6.404954 GCCACCAGTACTGTCTTTTGTTTTTA 60.405 38.462 21.18 0.00 0.00 1.52
2744 4188 7.683463 GCCACCAGTACTGTCTTTTGTTTTTAT 60.683 37.037 21.18 0.00 0.00 1.40
2745 4189 8.194769 CCACCAGTACTGTCTTTTGTTTTTATT 58.805 33.333 21.18 0.00 0.00 1.40
2802 4246 4.884164 TGGTGTGTATTTGATGTTGTGTGA 59.116 37.500 0.00 0.00 0.00 3.58
2852 4300 6.065976 TGTTGAGTGGATGATCTGGTATTT 57.934 37.500 0.00 0.00 0.00 1.40
3002 4455 5.722021 TCGGCATGATGCTAAATACTAGA 57.278 39.130 17.84 1.09 44.28 2.43
3003 4456 6.286240 TCGGCATGATGCTAAATACTAGAT 57.714 37.500 17.84 0.00 44.28 1.98
3004 4457 6.101997 TCGGCATGATGCTAAATACTAGATG 58.898 40.000 17.84 0.00 44.28 2.90
3005 4458 6.071391 TCGGCATGATGCTAAATACTAGATGA 60.071 38.462 17.84 0.00 44.28 2.92
3006 4459 6.035435 CGGCATGATGCTAAATACTAGATGAC 59.965 42.308 17.84 0.00 44.28 3.06
3007 4460 6.875726 GGCATGATGCTAAATACTAGATGACA 59.124 38.462 17.84 0.00 44.28 3.58
3008 4461 7.551974 GGCATGATGCTAAATACTAGATGACAT 59.448 37.037 17.84 0.00 44.28 3.06
3009 4462 8.388853 GCATGATGCTAAATACTAGATGACATG 58.611 37.037 10.72 0.00 40.96 3.21
3010 4463 9.433153 CATGATGCTAAATACTAGATGACATGT 57.567 33.333 0.00 0.00 0.00 3.21
3012 4465 9.264719 TGATGCTAAATACTAGATGACATGTTG 57.735 33.333 0.00 0.00 0.00 3.33
3013 4466 7.482654 TGCTAAATACTAGATGACATGTTGC 57.517 36.000 0.00 0.00 0.00 4.17
3014 4467 6.200854 TGCTAAATACTAGATGACATGTTGCG 59.799 38.462 0.00 0.00 0.00 4.85
3015 4468 5.409643 AAATACTAGATGACATGTTGCGC 57.590 39.130 0.00 0.00 0.00 6.09
3016 4469 1.656652 ACTAGATGACATGTTGCGCC 58.343 50.000 4.18 0.00 0.00 6.53
3017 4470 0.578683 CTAGATGACATGTTGCGCCG 59.421 55.000 4.18 0.00 0.00 6.46
3018 4471 0.174617 TAGATGACATGTTGCGCCGA 59.825 50.000 4.18 0.00 0.00 5.54
3019 4472 0.462581 AGATGACATGTTGCGCCGAT 60.463 50.000 4.18 0.00 0.00 4.18
3020 4473 0.316442 GATGACATGTTGCGCCGATG 60.316 55.000 4.18 6.90 0.00 3.84
3021 4474 1.717791 ATGACATGTTGCGCCGATGG 61.718 55.000 4.18 0.00 0.00 3.51
3022 4475 3.739782 GACATGTTGCGCCGATGGC 62.740 63.158 4.18 2.21 46.75 4.40
3041 4494 4.675404 CGGAAGCTTCAAGACCGT 57.325 55.556 27.02 0.00 38.97 4.83
3042 4495 2.914379 CGGAAGCTTCAAGACCGTT 58.086 52.632 27.02 0.00 38.97 4.44
3043 4496 1.226746 CGGAAGCTTCAAGACCGTTT 58.773 50.000 27.02 0.00 38.97 3.60
3044 4497 1.602377 CGGAAGCTTCAAGACCGTTTT 59.398 47.619 27.02 0.00 38.97 2.43
3045 4498 2.602217 CGGAAGCTTCAAGACCGTTTTG 60.602 50.000 27.02 0.00 38.97 2.44
3046 4499 2.616842 GGAAGCTTCAAGACCGTTTTGA 59.383 45.455 27.02 0.44 33.00 2.69
3047 4500 3.548214 GGAAGCTTCAAGACCGTTTTGAC 60.548 47.826 27.02 1.50 34.50 3.18
3048 4501 1.597663 AGCTTCAAGACCGTTTTGACG 59.402 47.619 4.05 4.26 34.50 4.35
3049 4502 1.920272 GCTTCAAGACCGTTTTGACGC 60.920 52.381 14.79 14.79 40.83 5.19
3050 4503 1.329292 CTTCAAGACCGTTTTGACGCA 59.671 47.619 4.05 0.00 34.50 5.24
3051 4504 0.934496 TCAAGACCGTTTTGACGCAG 59.066 50.000 0.44 0.00 30.03 5.18
3052 4505 0.934496 CAAGACCGTTTTGACGCAGA 59.066 50.000 0.00 0.00 0.00 4.26
3053 4506 1.070577 CAAGACCGTTTTGACGCAGAG 60.071 52.381 0.00 0.00 0.00 3.35
3054 4507 0.104304 AGACCGTTTTGACGCAGAGT 59.896 50.000 0.00 0.00 0.00 3.24
3055 4508 0.232303 GACCGTTTTGACGCAGAGTG 59.768 55.000 0.00 0.00 0.00 3.51
3056 4509 1.157870 ACCGTTTTGACGCAGAGTGG 61.158 55.000 0.00 0.00 0.00 4.00
3057 4510 1.157870 CCGTTTTGACGCAGAGTGGT 61.158 55.000 0.00 0.00 0.00 4.16
3058 4511 0.042188 CGTTTTGACGCAGAGTGGTG 60.042 55.000 0.00 0.00 0.00 4.17
3059 4512 0.307760 GTTTTGACGCAGAGTGGTGG 59.692 55.000 0.00 0.00 0.00 4.61
3060 4513 0.107410 TTTTGACGCAGAGTGGTGGT 60.107 50.000 0.00 0.00 0.00 4.16
3061 4514 0.107410 TTTGACGCAGAGTGGTGGTT 60.107 50.000 0.00 0.00 0.00 3.67
3062 4515 0.107410 TTGACGCAGAGTGGTGGTTT 60.107 50.000 0.00 0.00 0.00 3.27
3063 4516 0.813610 TGACGCAGAGTGGTGGTTTG 60.814 55.000 0.00 0.00 0.00 2.93
3064 4517 0.814010 GACGCAGAGTGGTGGTTTGT 60.814 55.000 0.00 0.00 0.00 2.83
3065 4518 0.393808 ACGCAGAGTGGTGGTTTGTT 60.394 50.000 0.00 0.00 0.00 2.83
3066 4519 0.738389 CGCAGAGTGGTGGTTTGTTT 59.262 50.000 0.00 0.00 0.00 2.83
3067 4520 1.533756 CGCAGAGTGGTGGTTTGTTTG 60.534 52.381 0.00 0.00 0.00 2.93
3068 4521 1.202405 GCAGAGTGGTGGTTTGTTTGG 60.202 52.381 0.00 0.00 0.00 3.28
3069 4522 2.099405 CAGAGTGGTGGTTTGTTTGGT 58.901 47.619 0.00 0.00 0.00 3.67
3070 4523 2.099405 AGAGTGGTGGTTTGTTTGGTG 58.901 47.619 0.00 0.00 0.00 4.17
3071 4524 1.136110 GAGTGGTGGTTTGTTTGGTGG 59.864 52.381 0.00 0.00 0.00 4.61
3072 4525 0.461163 GTGGTGGTTTGTTTGGTGGC 60.461 55.000 0.00 0.00 0.00 5.01
3073 4526 1.227118 GGTGGTTTGTTTGGTGGCG 60.227 57.895 0.00 0.00 0.00 5.69
3074 4527 1.513622 GTGGTTTGTTTGGTGGCGT 59.486 52.632 0.00 0.00 0.00 5.68
3075 4528 0.804156 GTGGTTTGTTTGGTGGCGTG 60.804 55.000 0.00 0.00 0.00 5.34
3076 4529 1.880796 GGTTTGTTTGGTGGCGTGC 60.881 57.895 0.00 0.00 0.00 5.34
3077 4530 1.140804 GTTTGTTTGGTGGCGTGCT 59.859 52.632 0.00 0.00 0.00 4.40
3078 4531 0.869880 GTTTGTTTGGTGGCGTGCTC 60.870 55.000 0.00 0.00 0.00 4.26
3079 4532 2.010582 TTTGTTTGGTGGCGTGCTCC 62.011 55.000 0.00 0.00 0.00 4.70
3080 4533 4.025401 GTTTGGTGGCGTGCTCCG 62.025 66.667 0.00 0.00 40.40 4.63
3093 4546 3.854669 CTCCGGAGCGCCCAAGAT 61.855 66.667 20.67 0.00 34.14 2.40
3094 4547 4.161295 TCCGGAGCGCCCAAGATG 62.161 66.667 2.29 0.00 34.14 2.90
3095 4548 4.161295 CCGGAGCGCCCAAGATGA 62.161 66.667 2.29 0.00 34.14 2.92
3096 4549 2.125147 CGGAGCGCCCAAGATGAA 60.125 61.111 2.29 0.00 34.14 2.57
3097 4550 2.176273 CGGAGCGCCCAAGATGAAG 61.176 63.158 2.29 0.00 34.14 3.02
3098 4551 1.821332 GGAGCGCCCAAGATGAAGG 60.821 63.158 2.29 0.00 34.14 3.46
3099 4552 1.078143 GAGCGCCCAAGATGAAGGT 60.078 57.895 2.29 0.00 0.00 3.50
3100 4553 0.678048 GAGCGCCCAAGATGAAGGTT 60.678 55.000 2.29 0.00 0.00 3.50
3101 4554 0.962356 AGCGCCCAAGATGAAGGTTG 60.962 55.000 2.29 0.00 0.00 3.77
3102 4555 1.937546 GCGCCCAAGATGAAGGTTGG 61.938 60.000 0.00 0.00 42.61 3.77
3107 4560 2.292267 CCAAGATGAAGGTTGGGATCG 58.708 52.381 0.00 0.00 39.76 3.69
3108 4561 2.292267 CAAGATGAAGGTTGGGATCGG 58.708 52.381 0.00 0.00 0.00 4.18
3109 4562 0.839946 AGATGAAGGTTGGGATCGGG 59.160 55.000 0.00 0.00 0.00 5.14
3110 4563 0.837272 GATGAAGGTTGGGATCGGGA 59.163 55.000 0.00 0.00 0.00 5.14
3111 4564 0.839946 ATGAAGGTTGGGATCGGGAG 59.160 55.000 0.00 0.00 0.00 4.30
3112 4565 0.252513 TGAAGGTTGGGATCGGGAGA 60.253 55.000 0.00 0.00 46.90 3.71
3113 4566 0.909623 GAAGGTTGGGATCGGGAGAA 59.090 55.000 0.00 0.00 45.37 2.87
3114 4567 1.280998 GAAGGTTGGGATCGGGAGAAA 59.719 52.381 0.00 0.00 45.37 2.52
3115 4568 1.596496 AGGTTGGGATCGGGAGAAAT 58.404 50.000 0.00 0.00 45.37 2.17
3116 4569 1.490910 AGGTTGGGATCGGGAGAAATC 59.509 52.381 0.00 0.00 45.37 2.17
3117 4570 1.477014 GGTTGGGATCGGGAGAAATCC 60.477 57.143 0.00 0.00 45.37 3.01
3125 4578 1.153147 GGGAGAAATCCCTGTCGGC 60.153 63.158 6.05 0.00 46.39 5.54
3126 4579 1.153147 GGAGAAATCCCTGTCGGCC 60.153 63.158 0.00 0.00 0.00 6.13
3127 4580 1.521681 GAGAAATCCCTGTCGGCCG 60.522 63.158 22.12 22.12 0.00 6.13
3128 4581 1.956629 GAGAAATCCCTGTCGGCCGA 61.957 60.000 27.28 27.28 0.00 5.54
3129 4582 1.078708 GAAATCCCTGTCGGCCGAA 60.079 57.895 32.93 15.31 0.00 4.30
3130 4583 1.366854 GAAATCCCTGTCGGCCGAAC 61.367 60.000 32.93 23.61 0.00 3.95
3131 4584 2.814913 AAATCCCTGTCGGCCGAACC 62.815 60.000 32.93 19.79 0.00 3.62
3159 4612 4.704833 CGGTGGTGCCTGAGGGTG 62.705 72.222 0.00 0.00 34.25 4.61
3160 4613 3.570212 GGTGGTGCCTGAGGGTGT 61.570 66.667 0.00 0.00 34.45 4.16
3161 4614 2.032681 GTGGTGCCTGAGGGTGTC 59.967 66.667 0.00 0.00 34.45 3.67
3162 4615 3.625897 TGGTGCCTGAGGGTGTCG 61.626 66.667 0.00 0.00 34.45 4.35
3168 4621 4.436998 CTGAGGGTGTCGCCGGAC 62.437 72.222 5.05 0.00 43.71 4.79
3172 4625 4.324991 GGGTGTCGCCGGACCTTT 62.325 66.667 5.05 0.00 42.73 3.11
3173 4626 2.741211 GGTGTCGCCGGACCTTTC 60.741 66.667 5.05 0.00 42.73 2.62
3174 4627 2.342648 GTGTCGCCGGACCTTTCT 59.657 61.111 5.05 0.00 42.73 2.52
3175 4628 2.027625 GTGTCGCCGGACCTTTCTG 61.028 63.158 5.05 0.00 42.73 3.02
3181 4634 2.269241 CGGACCTTTCTGGAGGGC 59.731 66.667 0.00 0.00 44.69 5.19
3182 4635 2.269241 GGACCTTTCTGGAGGGCG 59.731 66.667 0.00 0.00 46.52 6.13
3183 4636 2.593956 GGACCTTTCTGGAGGGCGT 61.594 63.158 0.00 0.00 46.52 5.68
3184 4637 1.079057 GACCTTTCTGGAGGGCGTC 60.079 63.158 0.00 0.00 41.31 5.19
3185 4638 2.125512 CCTTTCTGGAGGGCGTCG 60.126 66.667 0.53 0.00 38.35 5.12
3186 4639 2.125512 CTTTCTGGAGGGCGTCGG 60.126 66.667 0.53 0.00 0.00 4.79
3187 4640 3.665675 CTTTCTGGAGGGCGTCGGG 62.666 68.421 0.53 0.00 0.00 5.14
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
46 47 4.680237 TGCCGCCACTCCACGAAG 62.680 66.667 0.00 0.00 0.00 3.79
47 48 4.680237 CTGCCGCCACTCCACGAA 62.680 66.667 0.00 0.00 0.00 3.85
53 54 4.314440 TGTCACCTGCCGCCACTC 62.314 66.667 0.00 0.00 0.00 3.51
54 55 4.626081 GTGTCACCTGCCGCCACT 62.626 66.667 0.00 0.00 0.00 4.00
60 61 3.036084 CGACACGTGTCACCTGCC 61.036 66.667 39.14 18.30 44.99 4.85
61 62 3.702555 GCGACACGTGTCACCTGC 61.703 66.667 39.14 31.34 44.99 4.85
64 65 3.036084 CAGGCGACACGTGTCACC 61.036 66.667 37.15 37.15 45.19 4.02
66 67 4.961511 GGCAGGCGACACGTGTCA 62.962 66.667 39.14 0.00 44.99 3.58
87 88 3.052082 CTCACAAGTGGCGGCAGG 61.052 66.667 13.91 7.88 0.00 4.85
88 89 3.052082 CCTCACAAGTGGCGGCAG 61.052 66.667 13.91 2.93 0.00 4.85
89 90 4.641645 CCCTCACAAGTGGCGGCA 62.642 66.667 7.97 7.97 0.00 5.69
91 92 4.722700 CCCCCTCACAAGTGGCGG 62.723 72.222 0.00 1.94 0.00 6.13
92 93 3.901797 GACCCCCTCACAAGTGGCG 62.902 68.421 0.00 0.00 0.00 5.69
93 94 2.034221 GACCCCCTCACAAGTGGC 59.966 66.667 0.00 0.00 0.00 5.01
94 95 0.838122 AGAGACCCCCTCACAAGTGG 60.838 60.000 0.00 0.00 44.40 4.00
95 96 1.059913 AAGAGACCCCCTCACAAGTG 58.940 55.000 0.00 0.00 44.40 3.16
96 97 1.821088 AAAGAGACCCCCTCACAAGT 58.179 50.000 0.00 0.00 44.40 3.16
99 100 1.420138 GACAAAAGAGACCCCCTCACA 59.580 52.381 0.00 0.00 44.40 3.58
101 102 1.814429 TGACAAAAGAGACCCCCTCA 58.186 50.000 0.00 0.00 44.40 3.86
102 103 2.951229 TTGACAAAAGAGACCCCCTC 57.049 50.000 0.00 0.00 42.28 4.30
103 104 3.903530 AATTGACAAAAGAGACCCCCT 57.096 42.857 0.00 0.00 0.00 4.79
108 109 4.455124 CGGACGAAATTGACAAAAGAGAC 58.545 43.478 0.00 0.00 0.00 3.36
109 110 3.059188 GCGGACGAAATTGACAAAAGAGA 60.059 43.478 0.00 0.00 0.00 3.10
110 111 3.226347 GCGGACGAAATTGACAAAAGAG 58.774 45.455 0.00 0.00 0.00 2.85
112 113 2.973224 CTGCGGACGAAATTGACAAAAG 59.027 45.455 0.00 0.00 0.00 2.27
113 114 2.287308 CCTGCGGACGAAATTGACAAAA 60.287 45.455 0.00 0.00 0.00 2.44
114 115 1.265635 CCTGCGGACGAAATTGACAAA 59.734 47.619 0.00 0.00 0.00 2.83
115 116 0.871722 CCTGCGGACGAAATTGACAA 59.128 50.000 0.00 0.00 0.00 3.18
116 117 0.953471 CCCTGCGGACGAAATTGACA 60.953 55.000 0.00 0.00 0.00 3.58
118 119 1.376683 CCCCTGCGGACGAAATTGA 60.377 57.895 0.00 0.00 0.00 2.57
119 120 2.406616 CCCCCTGCGGACGAAATTG 61.407 63.158 0.00 0.00 0.00 2.32
120 121 2.045340 CCCCCTGCGGACGAAATT 60.045 61.111 0.00 0.00 0.00 1.82
121 122 3.325201 GACCCCCTGCGGACGAAAT 62.325 63.158 0.00 0.00 0.00 2.17
122 123 4.011517 GACCCCCTGCGGACGAAA 62.012 66.667 0.00 0.00 0.00 3.46
125 126 3.546714 AAAAGACCCCCTGCGGACG 62.547 63.158 0.00 0.00 0.00 4.79
126 127 1.228459 AAAAAGACCCCCTGCGGAC 60.228 57.895 0.00 0.00 0.00 4.79
127 128 1.074248 GAAAAAGACCCCCTGCGGA 59.926 57.895 0.00 0.00 0.00 5.54
128 129 2.332654 CGAAAAAGACCCCCTGCGG 61.333 63.158 0.00 0.00 0.00 5.69
130 131 2.636412 GCCGAAAAAGACCCCCTGC 61.636 63.158 0.00 0.00 0.00 4.85
132 133 0.114364 ATTGCCGAAAAAGACCCCCT 59.886 50.000 0.00 0.00 0.00 4.79
133 134 0.973632 AATTGCCGAAAAAGACCCCC 59.026 50.000 0.00 0.00 0.00 5.40
135 136 1.616374 TGGAATTGCCGAAAAAGACCC 59.384 47.619 0.00 0.00 40.66 4.46
136 137 2.296190 ACTGGAATTGCCGAAAAAGACC 59.704 45.455 0.00 0.00 40.66 3.85
137 138 3.565516 GACTGGAATTGCCGAAAAAGAC 58.434 45.455 0.00 0.00 40.66 3.01
139 140 2.584791 CGACTGGAATTGCCGAAAAAG 58.415 47.619 0.00 0.00 40.66 2.27
141 142 0.878416 CCGACTGGAATTGCCGAAAA 59.122 50.000 0.00 0.00 40.66 2.29
142 143 1.582610 GCCGACTGGAATTGCCGAAA 61.583 55.000 0.00 0.00 40.66 3.46
143 144 2.038269 GCCGACTGGAATTGCCGAA 61.038 57.895 0.00 0.00 40.66 4.30
144 145 2.435938 GCCGACTGGAATTGCCGA 60.436 61.111 0.00 0.00 40.66 5.54
146 147 1.372087 CTCTGCCGACTGGAATTGCC 61.372 60.000 0.00 0.00 37.49 4.52
147 148 1.372087 CCTCTGCCGACTGGAATTGC 61.372 60.000 0.00 0.00 37.49 3.56
148 149 0.745845 CCCTCTGCCGACTGGAATTG 60.746 60.000 0.00 0.00 37.49 2.32
150 151 1.613630 ACCCTCTGCCGACTGGAAT 60.614 57.895 0.00 0.00 37.49 3.01
151 152 2.203788 ACCCTCTGCCGACTGGAA 60.204 61.111 0.00 0.00 37.49 3.53
152 153 2.680352 GACCCTCTGCCGACTGGA 60.680 66.667 0.00 0.00 37.49 3.86
153 154 2.681778 AGACCCTCTGCCGACTGG 60.682 66.667 0.00 0.00 38.77 4.00
154 155 1.254284 AAGAGACCCTCTGCCGACTG 61.254 60.000 0.00 0.00 40.28 3.51
155 156 0.543174 AAAGAGACCCTCTGCCGACT 60.543 55.000 0.00 0.00 40.28 4.18
157 158 1.595993 CGAAAGAGACCCTCTGCCGA 61.596 60.000 10.60 0.00 40.28 5.54
158 159 1.153745 CGAAAGAGACCCTCTGCCG 60.154 63.158 0.00 1.43 40.28 5.69
159 160 0.108567 GTCGAAAGAGACCCTCTGCC 60.109 60.000 0.00 0.00 40.28 4.85
160 161 0.603569 TGTCGAAAGAGACCCTCTGC 59.396 55.000 0.00 0.00 40.28 4.26
161 162 3.386768 TTTGTCGAAAGAGACCCTCTG 57.613 47.619 0.00 0.00 40.28 3.35
162 163 4.417426 TTTTTGTCGAAAGAGACCCTCT 57.583 40.909 0.00 0.00 43.37 3.69
183 184 9.851686 TCAAATTTCAGGCTCATACTACATATT 57.148 29.630 0.00 0.00 0.00 1.28
184 185 9.851686 TTCAAATTTCAGGCTCATACTACATAT 57.148 29.630 0.00 0.00 0.00 1.78
185 186 9.330063 CTTCAAATTTCAGGCTCATACTACATA 57.670 33.333 0.00 0.00 0.00 2.29
186 187 8.049117 TCTTCAAATTTCAGGCTCATACTACAT 58.951 33.333 0.00 0.00 0.00 2.29
294 1506 3.024547 CCGAGATCCTTCCTGTCAACTA 58.975 50.000 0.00 0.00 0.00 2.24
457 1675 3.849951 CATAGGAGTGGCGGCGGT 61.850 66.667 9.78 0.00 0.00 5.68
624 1857 3.552384 TTCCCCAGCCACGTCGTT 61.552 61.111 0.00 0.00 0.00 3.85
732 1973 9.853177 CTCCCTTCATTTCTTTATATAAGGTGT 57.147 33.333 4.68 0.00 31.98 4.16
733 1974 9.853177 ACTCCCTTCATTTCTTTATATAAGGTG 57.147 33.333 4.68 0.00 31.98 4.00
740 1981 9.225682 AGGTCATACTCCCTTCATTTCTTTATA 57.774 33.333 0.00 0.00 0.00 0.98
741 1982 8.107196 AGGTCATACTCCCTTCATTTCTTTAT 57.893 34.615 0.00 0.00 0.00 1.40
742 1983 7.510675 AGGTCATACTCCCTTCATTTCTTTA 57.489 36.000 0.00 0.00 0.00 1.85
743 1984 6.394345 AGGTCATACTCCCTTCATTTCTTT 57.606 37.500 0.00 0.00 0.00 2.52
744 1985 6.183347 CAAGGTCATACTCCCTTCATTTCTT 58.817 40.000 0.00 0.00 39.04 2.52
745 1986 5.749462 CAAGGTCATACTCCCTTCATTTCT 58.251 41.667 0.00 0.00 39.04 2.52
746 1987 4.336713 GCAAGGTCATACTCCCTTCATTTC 59.663 45.833 0.00 0.00 39.04 2.17
747 1988 4.263905 TGCAAGGTCATACTCCCTTCATTT 60.264 41.667 0.00 0.00 39.04 2.32
748 1989 3.266772 TGCAAGGTCATACTCCCTTCATT 59.733 43.478 0.00 0.00 39.04 2.57
749 1990 2.846206 TGCAAGGTCATACTCCCTTCAT 59.154 45.455 0.00 0.00 39.04 2.57
750 1991 2.265367 TGCAAGGTCATACTCCCTTCA 58.735 47.619 0.00 0.00 39.04 3.02
751 1992 3.567478 ATGCAAGGTCATACTCCCTTC 57.433 47.619 0.00 0.00 39.04 3.46
752 1993 3.010584 ACAATGCAAGGTCATACTCCCTT 59.989 43.478 0.00 0.00 41.77 3.95
753 1994 2.578021 ACAATGCAAGGTCATACTCCCT 59.422 45.455 0.00 0.00 0.00 4.20
754 1995 3.004752 ACAATGCAAGGTCATACTCCC 57.995 47.619 0.00 0.00 0.00 4.30
755 1996 6.498304 CAATAACAATGCAAGGTCATACTCC 58.502 40.000 0.00 0.00 0.00 3.85
756 1997 5.973565 GCAATAACAATGCAAGGTCATACTC 59.026 40.000 0.00 0.00 43.29 2.59
757 1998 5.653769 AGCAATAACAATGCAAGGTCATACT 59.346 36.000 0.00 0.00 46.22 2.12
758 1999 5.894807 AGCAATAACAATGCAAGGTCATAC 58.105 37.500 0.00 0.00 46.22 2.39
759 2000 6.238347 CGTAGCAATAACAATGCAAGGTCATA 60.238 38.462 0.00 0.00 46.22 2.15
760 2001 5.449041 CGTAGCAATAACAATGCAAGGTCAT 60.449 40.000 0.00 0.00 46.22 3.06
761 2002 4.142708 CGTAGCAATAACAATGCAAGGTCA 60.143 41.667 0.00 0.00 46.22 4.02
762 2003 4.142687 ACGTAGCAATAACAATGCAAGGTC 60.143 41.667 0.00 0.00 46.22 3.85
763 2004 3.756434 ACGTAGCAATAACAATGCAAGGT 59.244 39.130 0.00 0.00 46.22 3.50
764 2005 4.142708 TGACGTAGCAATAACAATGCAAGG 60.143 41.667 0.00 0.00 46.22 3.61
765 2006 4.968626 TGACGTAGCAATAACAATGCAAG 58.031 39.130 0.00 0.00 46.22 4.01
766 2007 5.363979 TTGACGTAGCAATAACAATGCAA 57.636 34.783 0.00 0.00 46.22 4.08
767 2008 5.363979 TTTGACGTAGCAATAACAATGCA 57.636 34.783 0.00 0.00 46.22 3.96
768 2009 6.869421 ATTTTGACGTAGCAATAACAATGC 57.131 33.333 0.00 0.00 44.15 3.56
826 2068 7.659390 GCTTGTCTGCTCCTATATTAACTGATT 59.341 37.037 0.00 0.00 0.00 2.57
837 2079 3.054139 TGATTTGGCTTGTCTGCTCCTAT 60.054 43.478 0.00 0.00 0.00 2.57
838 2080 2.305635 TGATTTGGCTTGTCTGCTCCTA 59.694 45.455 0.00 0.00 0.00 2.94
839 2081 1.074405 TGATTTGGCTTGTCTGCTCCT 59.926 47.619 0.00 0.00 0.00 3.69
840 2082 1.471684 CTGATTTGGCTTGTCTGCTCC 59.528 52.381 0.00 0.00 0.00 4.70
841 2083 2.095364 CACTGATTTGGCTTGTCTGCTC 60.095 50.000 0.00 0.00 0.00 4.26
909 2162 7.388460 TCTAAGCTAGCGGTTTATATAGGAC 57.612 40.000 9.55 0.00 32.30 3.85
912 2165 9.938670 CACTATCTAAGCTAGCGGTTTATATAG 57.061 37.037 9.55 14.85 35.72 1.31
971 2233 0.902516 AGCCAGCGACCTCTTCTCTT 60.903 55.000 0.00 0.00 0.00 2.85
972 2234 1.304879 AGCCAGCGACCTCTTCTCT 60.305 57.895 0.00 0.00 0.00 3.10
973 2235 1.153667 CAGCCAGCGACCTCTTCTC 60.154 63.158 0.00 0.00 0.00 2.87
974 2236 1.603236 CTCAGCCAGCGACCTCTTCT 61.603 60.000 0.00 0.00 0.00 2.85
981 2243 3.672295 CTTCCCCTCAGCCAGCGAC 62.672 68.421 0.00 0.00 0.00 5.19
2197 3632 2.610859 ATGTCCAGCCCCGTCCTT 60.611 61.111 0.00 0.00 0.00 3.36
2229 3664 1.335506 GCGGCCGAAAATCAAAACAGA 60.336 47.619 33.48 0.00 0.00 3.41
2230 3665 1.059942 GCGGCCGAAAATCAAAACAG 58.940 50.000 33.48 0.00 0.00 3.16
2231 3666 0.385751 TGCGGCCGAAAATCAAAACA 59.614 45.000 33.48 10.37 0.00 2.83
2232 3667 1.492720 TTGCGGCCGAAAATCAAAAC 58.507 45.000 33.48 7.30 0.00 2.43
2233 3668 2.225068 TTTGCGGCCGAAAATCAAAA 57.775 40.000 33.48 5.17 0.00 2.44
2234 3669 2.225068 TTTTGCGGCCGAAAATCAAA 57.775 40.000 31.40 24.80 0.00 2.69
2235 3670 2.131183 CTTTTTGCGGCCGAAAATCAA 58.869 42.857 31.40 21.75 34.63 2.57
2236 3671 1.067821 ACTTTTTGCGGCCGAAAATCA 59.932 42.857 31.40 19.65 34.63 2.57
2237 3672 1.455408 CACTTTTTGCGGCCGAAAATC 59.545 47.619 31.40 12.64 34.63 2.17
2238 3673 1.496934 CACTTTTTGCGGCCGAAAAT 58.503 45.000 31.40 14.84 34.63 1.82
2239 3674 0.528684 CCACTTTTTGCGGCCGAAAA 60.529 50.000 33.48 30.41 34.13 2.29
2240 3675 1.066587 CCACTTTTTGCGGCCGAAA 59.933 52.632 33.48 25.41 0.00 3.46
2241 3676 1.175983 ATCCACTTTTTGCGGCCGAA 61.176 50.000 33.48 19.06 0.00 4.30
2242 3677 1.175983 AATCCACTTTTTGCGGCCGA 61.176 50.000 33.48 11.82 0.00 5.54
2243 3678 0.319469 AAATCCACTTTTTGCGGCCG 60.319 50.000 24.05 24.05 0.00 6.13
2244 3679 1.428448 GAAATCCACTTTTTGCGGCC 58.572 50.000 0.00 0.00 0.00 6.13
2245 3680 1.059942 CGAAATCCACTTTTTGCGGC 58.940 50.000 0.00 0.00 0.00 6.53
2246 3681 1.696988 CCGAAATCCACTTTTTGCGG 58.303 50.000 0.00 0.00 0.00 5.69
2247 3682 1.059942 GCCGAAATCCACTTTTTGCG 58.940 50.000 0.00 0.00 0.00 4.85
2248 3683 1.428448 GGCCGAAATCCACTTTTTGC 58.572 50.000 0.00 0.00 0.00 3.68
2249 3684 1.268352 TCGGCCGAAATCCACTTTTTG 59.732 47.619 28.99 0.00 0.00 2.44
2250 3685 1.611519 TCGGCCGAAATCCACTTTTT 58.388 45.000 28.99 0.00 0.00 1.94
2251 3686 1.611519 TTCGGCCGAAATCCACTTTT 58.388 45.000 37.13 0.00 0.00 2.27
2252 3687 1.834188 ATTCGGCCGAAATCCACTTT 58.166 45.000 41.31 21.74 37.69 2.66
2253 3688 1.834188 AATTCGGCCGAAATCCACTT 58.166 45.000 41.31 27.41 37.69 3.16
2254 3689 1.743394 GAAATTCGGCCGAAATCCACT 59.257 47.619 41.31 23.27 37.69 4.00
2255 3690 1.531058 CGAAATTCGGCCGAAATCCAC 60.531 52.381 41.31 27.17 37.69 4.02
2256 3691 0.730265 CGAAATTCGGCCGAAATCCA 59.270 50.000 41.31 22.04 37.69 3.41
2257 3692 3.526825 CGAAATTCGGCCGAAATCC 57.473 52.632 41.31 29.08 37.69 3.01
2267 3702 1.934463 CCGAGATGGCCGAAATTCG 59.066 57.895 8.62 8.62 40.07 3.34
2285 3720 3.467803 ACATATACTTTTCGCCTCAGGC 58.532 45.455 5.22 5.22 46.75 4.85
2286 3721 5.230942 CCTACATATACTTTTCGCCTCAGG 58.769 45.833 0.00 0.00 0.00 3.86
2287 3722 4.686554 GCCTACATATACTTTTCGCCTCAG 59.313 45.833 0.00 0.00 0.00 3.35
2288 3723 4.502604 GGCCTACATATACTTTTCGCCTCA 60.503 45.833 0.00 0.00 0.00 3.86
2289 3724 3.995048 GGCCTACATATACTTTTCGCCTC 59.005 47.826 0.00 0.00 0.00 4.70
2290 3725 3.389983 TGGCCTACATATACTTTTCGCCT 59.610 43.478 3.32 0.00 34.90 5.52
2291 3726 3.735591 TGGCCTACATATACTTTTCGCC 58.264 45.455 3.32 0.00 0.00 5.54
2292 3727 5.744666 TTTGGCCTACATATACTTTTCGC 57.255 39.130 3.32 0.00 0.00 4.70
2293 3728 7.647715 CCAATTTTGGCCTACATATACTTTTCG 59.352 37.037 3.32 0.00 42.21 3.46
2294 3729 8.871686 CCAATTTTGGCCTACATATACTTTTC 57.128 34.615 3.32 0.00 42.21 2.29
2309 3744 7.705752 AATTTGTCAAATTTCACCAATTTTGGC 59.294 29.630 16.26 0.00 43.94 4.52
2333 3768 9.949174 GCAATTTGACTTAAATTTGACCAAAAT 57.051 25.926 0.00 0.00 44.49 1.82
2334 3769 8.950210 TGCAATTTGACTTAAATTTGACCAAAA 58.050 25.926 0.00 0.00 44.49 2.44
2335 3770 8.498054 TGCAATTTGACTTAAATTTGACCAAA 57.502 26.923 0.00 6.63 44.49 3.28
2336 3771 7.768120 ACTGCAATTTGACTTAAATTTGACCAA 59.232 29.630 0.00 0.00 44.49 3.67
2337 3772 7.271511 ACTGCAATTTGACTTAAATTTGACCA 58.728 30.769 0.00 0.00 44.49 4.02
2338 3773 7.437862 TGACTGCAATTTGACTTAAATTTGACC 59.562 33.333 0.00 0.00 44.49 4.02
2339 3774 8.351495 TGACTGCAATTTGACTTAAATTTGAC 57.649 30.769 0.00 0.00 44.49 3.18
2340 3775 8.939201 TTGACTGCAATTTGACTTAAATTTGA 57.061 26.923 0.00 0.00 44.49 2.69
2341 3776 9.985318 TTTTGACTGCAATTTGACTTAAATTTG 57.015 25.926 0.00 0.00 44.49 2.32
2345 3780 9.985318 CAAATTTTGACTGCAATTTGACTTAAA 57.015 25.926 12.01 0.00 46.58 1.52
2346 3781 8.610896 CCAAATTTTGACTGCAATTTGACTTAA 58.389 29.630 17.00 0.00 46.58 1.85
2347 3782 7.768120 ACCAAATTTTGACTGCAATTTGACTTA 59.232 29.630 17.00 0.00 46.58 2.24
2348 3783 6.598850 ACCAAATTTTGACTGCAATTTGACTT 59.401 30.769 17.00 2.96 46.58 3.01
2349 3784 6.114767 ACCAAATTTTGACTGCAATTTGACT 58.885 32.000 17.00 3.44 46.58 3.41
2350 3785 6.362210 ACCAAATTTTGACTGCAATTTGAC 57.638 33.333 17.00 0.00 46.58 3.18
2351 3786 6.998968 AACCAAATTTTGACTGCAATTTGA 57.001 29.167 17.00 0.00 46.58 2.69
2352 3787 9.733219 ATTTAACCAAATTTTGACTGCAATTTG 57.267 25.926 10.72 10.87 44.66 2.32
2379 3814 5.277731 GCCATTTTCAAAAATTTCGGCTGAA 60.278 36.000 3.13 3.13 39.74 3.02
2380 3815 4.213059 GCCATTTTCAAAAATTTCGGCTGA 59.787 37.500 15.51 0.00 39.74 4.26
2381 3816 4.465921 GCCATTTTCAAAAATTTCGGCTG 58.534 39.130 15.51 0.00 39.74 4.85
2382 3817 3.501828 GGCCATTTTCAAAAATTTCGGCT 59.498 39.130 19.29 0.00 41.26 5.52
2383 3818 3.666638 CGGCCATTTTCAAAAATTTCGGC 60.667 43.478 14.87 14.87 41.01 5.54
2384 3819 3.743396 TCGGCCATTTTCAAAAATTTCGG 59.257 39.130 2.24 0.00 36.52 4.30
2385 3820 4.981389 TCGGCCATTTTCAAAAATTTCG 57.019 36.364 2.24 3.97 36.52 3.46
2386 3821 7.059374 CGAATTTCGGCCATTTTCAAAAATTTC 59.941 33.333 10.95 0.00 34.90 2.17
2387 3822 6.855403 CGAATTTCGGCCATTTTCAAAAATTT 59.145 30.769 10.95 0.00 34.90 1.82
2388 3823 6.369799 CGAATTTCGGCCATTTTCAAAAATT 58.630 32.000 10.95 1.61 34.90 1.82
2389 3824 5.925907 CGAATTTCGGCCATTTTCAAAAAT 58.074 33.333 10.95 0.00 36.29 1.82
2390 3825 5.335827 CGAATTTCGGCCATTTTCAAAAA 57.664 34.783 10.95 0.00 36.00 1.94
2391 3826 4.981389 CGAATTTCGGCCATTTTCAAAA 57.019 36.364 10.95 0.00 36.00 2.44
2404 3839 0.810031 ACCGAGATGGCCGAATTTCG 60.810 55.000 11.81 11.81 43.94 3.46
2405 3840 0.938008 GACCGAGATGGCCGAATTTC 59.062 55.000 0.00 0.00 43.94 2.17
2406 3841 0.541863 AGACCGAGATGGCCGAATTT 59.458 50.000 0.00 0.00 43.94 1.82
2407 3842 1.341531 CTAGACCGAGATGGCCGAATT 59.658 52.381 0.00 0.00 43.94 2.17
2408 3843 0.962489 CTAGACCGAGATGGCCGAAT 59.038 55.000 0.00 0.00 43.94 3.34
2409 3844 1.107538 CCTAGACCGAGATGGCCGAA 61.108 60.000 0.00 0.00 43.94 4.30
2410 3845 1.528542 CCTAGACCGAGATGGCCGA 60.529 63.158 0.00 0.00 43.94 5.54
2411 3846 2.565645 CCCTAGACCGAGATGGCCG 61.566 68.421 0.00 0.00 43.94 6.13
2412 3847 2.873525 GCCCTAGACCGAGATGGCC 61.874 68.421 0.00 0.00 43.94 5.36
2413 3848 2.737830 GCCCTAGACCGAGATGGC 59.262 66.667 0.00 0.00 43.94 4.40
2414 3849 1.107538 TTCGCCCTAGACCGAGATGG 61.108 60.000 0.00 0.00 46.41 3.51
2415 3850 0.744874 TTTCGCCCTAGACCGAGATG 59.255 55.000 0.00 0.00 34.68 2.90
2416 3851 1.481871 TTTTCGCCCTAGACCGAGAT 58.518 50.000 0.00 0.00 34.68 2.75
2417 3852 1.259609 TTTTTCGCCCTAGACCGAGA 58.740 50.000 0.00 0.00 34.68 4.04
2418 3853 3.826637 TTTTTCGCCCTAGACCGAG 57.173 52.632 0.00 0.00 34.68 4.63
2434 3869 6.976636 TTTGATTTTCGGTTTGAGCTTTTT 57.023 29.167 0.00 0.00 0.00 1.94
2435 3870 6.370166 TGTTTTGATTTTCGGTTTGAGCTTTT 59.630 30.769 0.00 0.00 0.00 2.27
2436 3871 5.872070 TGTTTTGATTTTCGGTTTGAGCTTT 59.128 32.000 0.00 0.00 0.00 3.51
2437 3872 5.290885 GTGTTTTGATTTTCGGTTTGAGCTT 59.709 36.000 0.00 0.00 0.00 3.74
2438 3873 4.803613 GTGTTTTGATTTTCGGTTTGAGCT 59.196 37.500 0.00 0.00 0.00 4.09
2439 3874 4.564769 TGTGTTTTGATTTTCGGTTTGAGC 59.435 37.500 0.00 0.00 0.00 4.26
2440 3875 6.237808 CCTTGTGTTTTGATTTTCGGTTTGAG 60.238 38.462 0.00 0.00 0.00 3.02
2441 3876 5.578727 CCTTGTGTTTTGATTTTCGGTTTGA 59.421 36.000 0.00 0.00 0.00 2.69
2442 3877 5.220567 CCCTTGTGTTTTGATTTTCGGTTTG 60.221 40.000 0.00 0.00 0.00 2.93
2443 3878 4.873259 CCCTTGTGTTTTGATTTTCGGTTT 59.127 37.500 0.00 0.00 0.00 3.27
2444 3879 4.438148 CCCTTGTGTTTTGATTTTCGGTT 58.562 39.130 0.00 0.00 0.00 4.44
2445 3880 3.739830 GCCCTTGTGTTTTGATTTTCGGT 60.740 43.478 0.00 0.00 0.00 4.69
2446 3881 2.799978 GCCCTTGTGTTTTGATTTTCGG 59.200 45.455 0.00 0.00 0.00 4.30
2447 3882 2.799978 GGCCCTTGTGTTTTGATTTTCG 59.200 45.455 0.00 0.00 0.00 3.46
2448 3883 2.799978 CGGCCCTTGTGTTTTGATTTTC 59.200 45.455 0.00 0.00 0.00 2.29
2449 3884 2.169561 ACGGCCCTTGTGTTTTGATTTT 59.830 40.909 0.00 0.00 0.00 1.82
2450 3885 1.760029 ACGGCCCTTGTGTTTTGATTT 59.240 42.857 0.00 0.00 0.00 2.17
2451 3886 1.068434 CACGGCCCTTGTGTTTTGATT 59.932 47.619 0.00 0.00 32.68 2.57
2452 3887 0.673437 CACGGCCCTTGTGTTTTGAT 59.327 50.000 0.00 0.00 32.68 2.57
2453 3888 1.388065 CCACGGCCCTTGTGTTTTGA 61.388 55.000 8.25 0.00 35.56 2.69
2454 3889 1.067250 CCACGGCCCTTGTGTTTTG 59.933 57.895 8.25 0.00 35.56 2.44
2455 3890 1.380650 ACCACGGCCCTTGTGTTTT 60.381 52.632 8.25 0.00 35.56 2.43
2456 3891 2.124693 CACCACGGCCCTTGTGTTT 61.125 57.895 8.25 0.00 35.56 2.83
2457 3892 2.518349 CACCACGGCCCTTGTGTT 60.518 61.111 8.25 0.00 35.56 3.32
2458 3893 4.579384 CCACCACGGCCCTTGTGT 62.579 66.667 8.25 0.00 35.56 3.72
2459 3894 4.263572 TCCACCACGGCCCTTGTG 62.264 66.667 0.00 0.00 37.09 3.33
2460 3895 3.953775 CTCCACCACGGCCCTTGT 61.954 66.667 0.00 0.00 33.14 3.16
2461 3896 3.612247 CTCTCCACCACGGCCCTTG 62.612 68.421 0.00 0.00 33.14 3.61
2628 4063 2.095263 CAGGCGATGAAATTTTCACGGT 60.095 45.455 23.03 8.93 43.48 4.83
2666 4101 5.594724 GCAAACTGCAGCAAATAAATCAA 57.405 34.783 15.27 0.00 44.26 2.57
2708 4152 3.755628 CTGGTGGCTGCATGCACC 61.756 66.667 18.46 22.10 45.15 5.01
2745 4189 3.349022 ACTGGTGGTCGAACTTCAAAAA 58.651 40.909 0.33 0.00 0.00 1.94
2750 4194 2.035576 ACAGTACTGGTGGTCGAACTTC 59.964 50.000 26.12 0.00 34.19 3.01
2764 4208 2.362397 CACACCACAGACAGACAGTACT 59.638 50.000 0.00 0.00 0.00 2.73
2873 4326 1.145119 AGATGATGGCCTCACATGCAT 59.855 47.619 3.32 0.00 36.48 3.96
2874 4327 0.549469 AGATGATGGCCTCACATGCA 59.451 50.000 3.32 0.00 36.48 3.96
2875 4328 1.688772 AAGATGATGGCCTCACATGC 58.311 50.000 3.32 2.33 36.48 4.06
2876 4329 5.301045 ACAATAAAGATGATGGCCTCACATG 59.699 40.000 3.32 0.00 36.48 3.21
2958 4411 5.523552 CGATGCATTGGTTGATGACTACTAA 59.476 40.000 5.98 0.00 0.00 2.24
2986 4439 9.264719 CAACATGTCATCTAGTATTTAGCATCA 57.735 33.333 0.00 0.00 0.00 3.07
2994 4447 3.809832 GGCGCAACATGTCATCTAGTATT 59.190 43.478 10.83 0.00 0.00 1.89
2995 4448 3.393800 GGCGCAACATGTCATCTAGTAT 58.606 45.455 10.83 0.00 0.00 2.12
2996 4449 2.798145 CGGCGCAACATGTCATCTAGTA 60.798 50.000 10.83 0.00 0.00 1.82
2997 4450 1.656652 GGCGCAACATGTCATCTAGT 58.343 50.000 10.83 0.00 0.00 2.57
2998 4451 0.578683 CGGCGCAACATGTCATCTAG 59.421 55.000 10.83 0.00 0.00 2.43
2999 4452 0.174617 TCGGCGCAACATGTCATCTA 59.825 50.000 10.83 0.00 0.00 1.98
3000 4453 0.462581 ATCGGCGCAACATGTCATCT 60.463 50.000 10.83 0.00 0.00 2.90
3001 4454 0.316442 CATCGGCGCAACATGTCATC 60.316 55.000 10.83 0.00 0.00 2.92
3002 4455 1.717791 CCATCGGCGCAACATGTCAT 61.718 55.000 10.83 0.00 0.00 3.06
3003 4456 2.397754 CCATCGGCGCAACATGTCA 61.398 57.895 10.83 0.00 0.00 3.58
3004 4457 2.404789 CCATCGGCGCAACATGTC 59.595 61.111 10.83 0.00 0.00 3.06
3005 4458 3.814268 GCCATCGGCGCAACATGT 61.814 61.111 10.83 0.00 39.62 3.21
3016 4469 3.929948 GAAGCTTCCGCGCCATCG 61.930 66.667 15.97 0.00 42.32 3.84
3017 4470 2.315038 CTTGAAGCTTCCGCGCCATC 62.315 60.000 23.42 0.00 42.32 3.51
3018 4471 2.359850 TTGAAGCTTCCGCGCCAT 60.360 55.556 23.42 0.00 42.32 4.40
3019 4472 3.049674 CTTGAAGCTTCCGCGCCA 61.050 61.111 23.42 1.26 42.32 5.69
3020 4473 2.742372 TCTTGAAGCTTCCGCGCC 60.742 61.111 23.42 0.00 42.32 6.53
3021 4474 2.476499 GTCTTGAAGCTTCCGCGC 59.524 61.111 23.42 0.00 42.32 6.86
3022 4475 2.730672 CGGTCTTGAAGCTTCCGCG 61.731 63.158 23.42 11.55 42.32 6.46
3023 4476 1.228657 AACGGTCTTGAAGCTTCCGC 61.229 55.000 23.42 10.43 44.17 5.54
3024 4477 1.226746 AAACGGTCTTGAAGCTTCCG 58.773 50.000 23.42 20.93 45.53 4.30
3025 4478 2.616842 TCAAAACGGTCTTGAAGCTTCC 59.383 45.455 23.42 7.53 29.93 3.46
3026 4479 3.618698 GTCAAAACGGTCTTGAAGCTTC 58.381 45.455 19.89 19.89 34.68 3.86
3027 4480 2.031683 CGTCAAAACGGTCTTGAAGCTT 59.968 45.455 0.00 0.00 45.21 3.74
3028 4481 1.597663 CGTCAAAACGGTCTTGAAGCT 59.402 47.619 0.00 0.00 45.21 3.74
3029 4482 2.018717 CGTCAAAACGGTCTTGAAGC 57.981 50.000 0.00 0.00 45.21 3.86
3040 4493 0.307760 CCACCACTCTGCGTCAAAAC 59.692 55.000 0.00 0.00 0.00 2.43
3041 4494 0.107410 ACCACCACTCTGCGTCAAAA 60.107 50.000 0.00 0.00 0.00 2.44
3042 4495 0.107410 AACCACCACTCTGCGTCAAA 60.107 50.000 0.00 0.00 0.00 2.69
3043 4496 0.107410 AAACCACCACTCTGCGTCAA 60.107 50.000 0.00 0.00 0.00 3.18
3044 4497 0.813610 CAAACCACCACTCTGCGTCA 60.814 55.000 0.00 0.00 0.00 4.35
3045 4498 0.814010 ACAAACCACCACTCTGCGTC 60.814 55.000 0.00 0.00 0.00 5.19
3046 4499 0.393808 AACAAACCACCACTCTGCGT 60.394 50.000 0.00 0.00 0.00 5.24
3047 4500 0.738389 AAACAAACCACCACTCTGCG 59.262 50.000 0.00 0.00 0.00 5.18
3048 4501 1.202405 CCAAACAAACCACCACTCTGC 60.202 52.381 0.00 0.00 0.00 4.26
3049 4502 2.099405 ACCAAACAAACCACCACTCTG 58.901 47.619 0.00 0.00 0.00 3.35
3050 4503 2.099405 CACCAAACAAACCACCACTCT 58.901 47.619 0.00 0.00 0.00 3.24
3051 4504 1.136110 CCACCAAACAAACCACCACTC 59.864 52.381 0.00 0.00 0.00 3.51
3052 4505 1.190643 CCACCAAACAAACCACCACT 58.809 50.000 0.00 0.00 0.00 4.00
3053 4506 0.461163 GCCACCAAACAAACCACCAC 60.461 55.000 0.00 0.00 0.00 4.16
3054 4507 1.901085 GCCACCAAACAAACCACCA 59.099 52.632 0.00 0.00 0.00 4.17
3055 4508 1.227118 CGCCACCAAACAAACCACC 60.227 57.895 0.00 0.00 0.00 4.61
3056 4509 0.804156 CACGCCACCAAACAAACCAC 60.804 55.000 0.00 0.00 0.00 4.16
3057 4510 1.513158 CACGCCACCAAACAAACCA 59.487 52.632 0.00 0.00 0.00 3.67
3058 4511 1.880796 GCACGCCACCAAACAAACC 60.881 57.895 0.00 0.00 0.00 3.27
3059 4512 0.869880 GAGCACGCCACCAAACAAAC 60.870 55.000 0.00 0.00 0.00 2.93
3060 4513 1.435515 GAGCACGCCACCAAACAAA 59.564 52.632 0.00 0.00 0.00 2.83
3061 4514 2.485795 GGAGCACGCCACCAAACAA 61.486 57.895 0.00 0.00 0.00 2.83
3062 4515 2.904866 GGAGCACGCCACCAAACA 60.905 61.111 0.00 0.00 0.00 2.83
3063 4516 4.025401 CGGAGCACGCCACCAAAC 62.025 66.667 0.00 0.00 34.82 2.93
3076 4529 3.854669 ATCTTGGGCGCTCCGGAG 61.855 66.667 27.83 27.83 38.76 4.63
3077 4530 4.161295 CATCTTGGGCGCTCCGGA 62.161 66.667 3.94 2.93 38.76 5.14
3078 4531 3.680620 TTCATCTTGGGCGCTCCGG 62.681 63.158 3.94 0.00 38.76 5.14
3079 4532 2.125147 TTCATCTTGGGCGCTCCG 60.125 61.111 3.94 0.00 38.76 4.63
3080 4533 1.821332 CCTTCATCTTGGGCGCTCC 60.821 63.158 3.94 6.36 0.00 4.70
3081 4534 0.678048 AACCTTCATCTTGGGCGCTC 60.678 55.000 7.64 2.47 0.00 5.03
3082 4535 0.962356 CAACCTTCATCTTGGGCGCT 60.962 55.000 7.64 0.00 0.00 5.92
3083 4536 1.508088 CAACCTTCATCTTGGGCGC 59.492 57.895 0.00 0.00 0.00 6.53
3084 4537 2.183409 CCAACCTTCATCTTGGGCG 58.817 57.895 0.00 0.00 34.35 6.13
3087 4540 2.292267 CGATCCCAACCTTCATCTTGG 58.708 52.381 0.00 0.00 37.30 3.61
3088 4541 2.292267 CCGATCCCAACCTTCATCTTG 58.708 52.381 0.00 0.00 0.00 3.02
3089 4542 1.212935 CCCGATCCCAACCTTCATCTT 59.787 52.381 0.00 0.00 0.00 2.40
3090 4543 0.839946 CCCGATCCCAACCTTCATCT 59.160 55.000 0.00 0.00 0.00 2.90
3091 4544 0.837272 TCCCGATCCCAACCTTCATC 59.163 55.000 0.00 0.00 0.00 2.92
3092 4545 0.839946 CTCCCGATCCCAACCTTCAT 59.160 55.000 0.00 0.00 0.00 2.57
3093 4546 0.252513 TCTCCCGATCCCAACCTTCA 60.253 55.000 0.00 0.00 0.00 3.02
3094 4547 0.909623 TTCTCCCGATCCCAACCTTC 59.090 55.000 0.00 0.00 0.00 3.46
3095 4548 1.368374 TTTCTCCCGATCCCAACCTT 58.632 50.000 0.00 0.00 0.00 3.50
3096 4549 1.490910 GATTTCTCCCGATCCCAACCT 59.509 52.381 0.00 0.00 0.00 3.50
3097 4550 1.477014 GGATTTCTCCCGATCCCAACC 60.477 57.143 0.00 0.00 36.61 3.77
3098 4551 1.968704 GGATTTCTCCCGATCCCAAC 58.031 55.000 0.00 0.00 36.61 3.77
3108 4561 1.153147 GGCCGACAGGGATTTCTCC 60.153 63.158 0.00 0.00 41.26 3.71
3109 4562 1.521681 CGGCCGACAGGGATTTCTC 60.522 63.158 24.07 0.00 38.47 2.87
3110 4563 1.550130 TTCGGCCGACAGGGATTTCT 61.550 55.000 31.19 0.00 38.47 2.52
3111 4564 1.078708 TTCGGCCGACAGGGATTTC 60.079 57.895 31.19 0.00 38.47 2.17
3112 4565 1.376812 GTTCGGCCGACAGGGATTT 60.377 57.895 31.19 0.00 38.47 2.17
3113 4566 2.267961 GTTCGGCCGACAGGGATT 59.732 61.111 31.19 0.00 38.47 3.01
3114 4567 3.782443 GGTTCGGCCGACAGGGAT 61.782 66.667 31.19 0.00 38.47 3.85
3142 4595 4.704833 CACCCTCAGGCACCACCG 62.705 72.222 0.00 0.00 46.52 4.94
3143 4596 3.553095 GACACCCTCAGGCACCACC 62.553 68.421 0.00 0.00 36.11 4.61
3144 4597 2.032681 GACACCCTCAGGCACCAC 59.967 66.667 0.00 0.00 36.11 4.16
3145 4598 3.625897 CGACACCCTCAGGCACCA 61.626 66.667 0.00 0.00 36.11 4.17
3151 4604 4.436998 GTCCGGCGACACCCTCAG 62.437 72.222 9.30 0.00 38.99 3.35
3155 4608 4.324991 AAAGGTCCGGCGACACCC 62.325 66.667 20.31 9.55 41.13 4.61
3156 4609 2.741211 GAAAGGTCCGGCGACACC 60.741 66.667 17.36 17.36 41.13 4.16
3157 4610 2.027625 CAGAAAGGTCCGGCGACAC 61.028 63.158 9.30 4.14 41.13 3.67
3158 4611 2.342279 CAGAAAGGTCCGGCGACA 59.658 61.111 9.30 0.00 41.13 4.35
3159 4612 2.434359 CCAGAAAGGTCCGGCGAC 60.434 66.667 9.30 4.52 38.38 5.19
3160 4613 2.602267 TCCAGAAAGGTCCGGCGA 60.602 61.111 9.30 0.00 39.02 5.54
3161 4614 2.125512 CTCCAGAAAGGTCCGGCG 60.126 66.667 0.00 0.00 39.02 6.46
3162 4615 2.269241 CCTCCAGAAAGGTCCGGC 59.731 66.667 0.00 0.00 39.02 6.13
3163 4616 2.990479 CCCTCCAGAAAGGTCCGG 59.010 66.667 0.00 0.00 39.02 5.14
3164 4617 2.269241 GCCCTCCAGAAAGGTCCG 59.731 66.667 0.00 0.00 39.02 4.79
3165 4618 2.269241 CGCCCTCCAGAAAGGTCC 59.731 66.667 0.00 0.00 39.02 4.46
3166 4619 1.079057 GACGCCCTCCAGAAAGGTC 60.079 63.158 0.00 0.00 39.02 3.85
3167 4620 2.943978 CGACGCCCTCCAGAAAGGT 61.944 63.158 0.00 0.00 39.02 3.50
3168 4621 2.125512 CGACGCCCTCCAGAAAGG 60.126 66.667 0.00 0.00 39.47 3.11
3169 4622 2.125512 CCGACGCCCTCCAGAAAG 60.126 66.667 0.00 0.00 0.00 2.62
3170 4623 3.702048 CCCGACGCCCTCCAGAAA 61.702 66.667 0.00 0.00 0.00 2.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.