Multiple sequence alignment - TraesCS5B01G519700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G519700 chr5B 100.000 3024 0 0 492 3515 682226599 682223576 0.000000e+00 5585.0
1 TraesCS5B01G519700 chr5B 100.000 151 0 0 1 151 682227090 682226940 2.670000e-71 279.0
2 TraesCS5B01G519700 chr4A 89.655 1885 105 40 732 2574 627971077 627969241 0.000000e+00 2318.0
3 TraesCS5B01G519700 chr4A 92.481 133 8 2 2793 2924 627969182 627969051 4.630000e-44 189.0
4 TraesCS5B01G519700 chr4A 87.879 99 8 4 2701 2796 464687375 464687278 2.870000e-21 113.0
5 TraesCS5B01G519700 chr5D 91.121 1712 87 25 653 2346 540001797 540000133 0.000000e+00 2259.0
6 TraesCS5B01G519700 chr5D 88.950 181 7 5 2506 2681 539999965 539999793 9.890000e-51 211.0
7 TraesCS5B01G519700 chr5D 91.964 112 8 1 2791 2902 539999788 539999678 4.700000e-34 156.0
8 TraesCS5B01G519700 chr5D 84.545 110 13 4 2687 2795 56448566 56448460 4.800000e-19 106.0
9 TraesCS5B01G519700 chr5D 94.545 55 2 1 538 592 442103812 442103759 2.250000e-12 84.2
10 TraesCS5B01G519700 chr2D 90.450 555 52 1 2956 3509 385571214 385571768 0.000000e+00 730.0
11 TraesCS5B01G519700 chr2D 87.879 99 11 1 2708 2805 35026491 35026589 7.970000e-22 115.0
12 TraesCS5B01G519700 chr2D 87.755 98 10 2 2702 2797 651527887 651527790 2.870000e-21 113.0
13 TraesCS5B01G519700 chr1D 90.054 553 46 2 2957 3509 181065553 181066096 0.000000e+00 708.0
14 TraesCS5B01G519700 chr1D 86.786 560 72 2 2957 3515 65578178 65577620 1.070000e-174 623.0
15 TraesCS5B01G519700 chr1D 81.567 217 40 0 1814 2030 41565712 41565496 2.790000e-41 180.0
16 TraesCS5B01G519700 chr1D 90.566 106 8 2 1620 1724 41565939 41565835 4.730000e-29 139.0
17 TraesCS5B01G519700 chr3D 89.007 564 60 1 2954 3515 83600330 83599767 0.000000e+00 697.0
18 TraesCS5B01G519700 chr3D 88.119 101 11 1 2695 2794 24062596 24062696 6.160000e-23 119.0
19 TraesCS5B01G519700 chr3D 88.298 94 11 0 2709 2802 580907755 580907662 2.870000e-21 113.0
20 TraesCS5B01G519700 chr3D 94.545 55 2 1 538 592 48536541 48536594 2.250000e-12 84.2
21 TraesCS5B01G519700 chr3D 90.000 60 4 2 532 591 504419915 504419972 3.760000e-10 76.8
22 TraesCS5B01G519700 chr6D 87.568 555 55 10 2957 3509 296669387 296668845 6.400000e-177 630.0
23 TraesCS5B01G519700 chr6D 96.296 54 0 2 530 583 100344176 100344227 1.740000e-13 87.9
24 TraesCS5B01G519700 chr3B 89.404 453 44 4 2956 3406 781155466 781155916 5.090000e-158 568.0
25 TraesCS5B01G519700 chr3B 92.508 307 23 0 3209 3515 781206898 781207204 1.160000e-119 440.0
26 TraesCS5B01G519700 chr3B 93.103 261 13 1 2952 3212 781155911 781156166 9.210000e-101 377.0
27 TraesCS5B01G519700 chr3B 77.679 224 49 1 3240 3462 88417982 88417759 6.120000e-28 135.0
28 TraesCS5B01G519700 chr2B 85.278 557 56 10 2953 3504 23785514 23786049 5.130000e-153 551.0
29 TraesCS5B01G519700 chrUn 85.532 235 32 2 3282 3515 85690062 85690295 9.750000e-61 244.0
30 TraesCS5B01G519700 chrUn 88.485 165 17 2 3119 3283 85684614 85684776 7.700000e-47 198.0
31 TraesCS5B01G519700 chr7A 89.080 174 17 2 2958 3130 256178772 256178944 7.640000e-52 215.0
32 TraesCS5B01G519700 chr1A 81.567 217 40 0 1814 2030 41367559 41367343 2.790000e-41 180.0
33 TraesCS5B01G519700 chr1A 90.566 106 8 2 1620 1724 41367780 41367676 4.730000e-29 139.0
34 TraesCS5B01G519700 chr3A 78.169 284 53 6 3185 3462 712544983 712544703 4.660000e-39 172.0
35 TraesCS5B01G519700 chr1B 80.645 217 42 0 1814 2030 61614215 61613999 6.030000e-38 169.0
36 TraesCS5B01G519700 chr1B 90.566 106 8 2 1620 1724 61614439 61614335 4.730000e-29 139.0
37 TraesCS5B01G519700 chr1B 88.542 96 9 2 2702 2796 33839413 33839319 7.970000e-22 115.0
38 TraesCS5B01G519700 chr1B 89.362 94 7 3 2703 2794 129095796 129095888 7.970000e-22 115.0
39 TraesCS5B01G519700 chr6B 91.765 85 7 0 2710 2794 479166734 479166818 6.160000e-23 119.0
40 TraesCS5B01G519700 chr7D 94.643 56 1 2 532 587 1595678 1595625 6.250000e-13 86.1
41 TraesCS5B01G519700 chr7D 94.643 56 1 2 532 587 1599625 1599572 6.250000e-13 86.1
42 TraesCS5B01G519700 chr7D 94.643 56 1 2 532 587 1603934 1603881 6.250000e-13 86.1
43 TraesCS5B01G519700 chr7D 90.000 60 5 1 533 592 86753889 86753947 3.760000e-10 76.8
44 TraesCS5B01G519700 chr4D 91.667 60 3 2 533 592 400889592 400889535 8.090000e-12 82.4
45 TraesCS5B01G519700 chr2A 100.000 28 0 0 1538 1565 90742714 90742741 6.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G519700 chr5B 682223576 682227090 3514 True 2932.000000 5585 100.000000 1 3515 2 chr5B.!!$R1 3514
1 TraesCS5B01G519700 chr4A 627969051 627971077 2026 True 1253.500000 2318 91.068000 732 2924 2 chr4A.!!$R2 2192
2 TraesCS5B01G519700 chr5D 539999678 540001797 2119 True 875.333333 2259 90.678333 653 2902 3 chr5D.!!$R3 2249
3 TraesCS5B01G519700 chr2D 385571214 385571768 554 False 730.000000 730 90.450000 2956 3509 1 chr2D.!!$F2 553
4 TraesCS5B01G519700 chr1D 181065553 181066096 543 False 708.000000 708 90.054000 2957 3509 1 chr1D.!!$F1 552
5 TraesCS5B01G519700 chr1D 65577620 65578178 558 True 623.000000 623 86.786000 2957 3515 1 chr1D.!!$R1 558
6 TraesCS5B01G519700 chr3D 83599767 83600330 563 True 697.000000 697 89.007000 2954 3515 1 chr3D.!!$R1 561
7 TraesCS5B01G519700 chr6D 296668845 296669387 542 True 630.000000 630 87.568000 2957 3509 1 chr6D.!!$R1 552
8 TraesCS5B01G519700 chr3B 781155466 781156166 700 False 472.500000 568 91.253500 2952 3406 2 chr3B.!!$F2 454
9 TraesCS5B01G519700 chr2B 23785514 23786049 535 False 551.000000 551 85.278000 2953 3504 1 chr2B.!!$F1 551

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
117 118 0.031178 GCTCAACCTTTGTGCACTGG 59.969 55.0 19.41 18.55 46.32 4.00 F
527 528 0.102300 ACTTTGTGTTTTGCCTCGGC 59.898 50.0 0.00 0.00 42.35 5.54 F
596 597 0.107703 TCCAACCTTCGCAGGCTATG 60.108 55.0 0.00 0.00 45.56 2.23 F
597 598 0.107703 CCAACCTTCGCAGGCTATGA 60.108 55.0 0.00 0.00 45.56 2.15 F
601 602 0.179111 CCTTCGCAGGCTATGACGAA 60.179 55.0 11.57 11.57 41.67 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2109 2152 1.061411 CACGATGCTGTCAATGGCG 59.939 57.895 0.00 0.0 0.00 5.69 R
2167 2219 0.105964 CTCTGGTCCACCACGTTCAA 59.894 55.000 0.00 0.0 42.01 2.69 R
2295 2347 0.250234 CCAAGAGGTCGAAGCCATCA 59.750 55.000 0.00 0.0 0.00 3.07 R
2416 2494 0.607217 TTGCTGTGCATGCTAGTGCT 60.607 50.000 20.33 0.0 45.27 4.40 R
2568 2663 4.005650 AGTGCAGTTGGATCAATGTACAG 58.994 43.478 0.33 0.0 31.63 2.74 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.192922 CGCCGTTGGAATCGTCCC 61.193 66.667 0.00 0.00 44.23 4.46
18 19 2.267961 GCCGTTGGAATCGTCCCT 59.732 61.111 0.00 0.00 44.23 4.20
19 20 1.518774 GCCGTTGGAATCGTCCCTA 59.481 57.895 0.00 0.00 44.23 3.53
20 21 0.808847 GCCGTTGGAATCGTCCCTAC 60.809 60.000 0.00 0.00 44.23 3.18
21 22 0.179092 CCGTTGGAATCGTCCCTACC 60.179 60.000 0.00 0.00 44.23 3.18
22 23 0.179092 CGTTGGAATCGTCCCTACCC 60.179 60.000 0.00 0.00 44.23 3.69
23 24 1.201424 GTTGGAATCGTCCCTACCCT 58.799 55.000 0.00 0.00 44.23 4.34
24 25 1.138464 GTTGGAATCGTCCCTACCCTC 59.862 57.143 0.00 0.00 44.23 4.30
25 26 0.754217 TGGAATCGTCCCTACCCTCG 60.754 60.000 0.00 0.00 44.23 4.63
26 27 1.363080 GAATCGTCCCTACCCTCGC 59.637 63.158 0.00 0.00 0.00 5.03
27 28 2.085042 GAATCGTCCCTACCCTCGCC 62.085 65.000 0.00 0.00 0.00 5.54
30 31 2.757099 GTCCCTACCCTCGCCGAA 60.757 66.667 0.00 0.00 0.00 4.30
31 32 2.441532 TCCCTACCCTCGCCGAAG 60.442 66.667 0.00 0.00 0.00 3.79
32 33 2.758737 CCCTACCCTCGCCGAAGT 60.759 66.667 0.00 0.00 0.00 3.01
33 34 2.494918 CCTACCCTCGCCGAAGTG 59.505 66.667 0.08 0.00 0.00 3.16
34 35 2.202756 CTACCCTCGCCGAAGTGC 60.203 66.667 0.08 0.00 0.00 4.40
35 36 2.678934 TACCCTCGCCGAAGTGCT 60.679 61.111 0.08 0.00 0.00 4.40
36 37 2.615262 CTACCCTCGCCGAAGTGCTC 62.615 65.000 0.08 0.00 0.00 4.26
37 38 3.764466 CCCTCGCCGAAGTGCTCT 61.764 66.667 0.00 0.00 0.00 4.09
38 39 2.262915 CCTCGCCGAAGTGCTCTT 59.737 61.111 0.00 0.00 36.51 2.85
39 40 1.807573 CCTCGCCGAAGTGCTCTTC 60.808 63.158 16.77 16.77 44.55 2.87
40 41 1.214062 CTCGCCGAAGTGCTCTTCT 59.786 57.895 22.34 0.00 45.47 2.85
41 42 0.389166 CTCGCCGAAGTGCTCTTCTT 60.389 55.000 22.34 5.54 45.47 2.52
42 43 0.388649 TCGCCGAAGTGCTCTTCTTC 60.389 55.000 22.34 14.04 45.47 2.87
47 48 2.440539 GAAGTGCTCTTCTTCGTCCA 57.559 50.000 18.91 0.00 44.58 4.02
48 49 2.755650 GAAGTGCTCTTCTTCGTCCAA 58.244 47.619 18.91 0.00 44.58 3.53
49 50 2.910688 AGTGCTCTTCTTCGTCCAAA 57.089 45.000 0.00 0.00 0.00 3.28
50 51 3.194005 AGTGCTCTTCTTCGTCCAAAA 57.806 42.857 0.00 0.00 0.00 2.44
51 52 3.744660 AGTGCTCTTCTTCGTCCAAAAT 58.255 40.909 0.00 0.00 0.00 1.82
52 53 3.748568 AGTGCTCTTCTTCGTCCAAAATC 59.251 43.478 0.00 0.00 0.00 2.17
53 54 3.748568 GTGCTCTTCTTCGTCCAAAATCT 59.251 43.478 0.00 0.00 0.00 2.40
54 55 3.997021 TGCTCTTCTTCGTCCAAAATCTC 59.003 43.478 0.00 0.00 0.00 2.75
55 56 3.061429 GCTCTTCTTCGTCCAAAATCTCG 59.939 47.826 0.00 0.00 0.00 4.04
56 57 2.993899 TCTTCTTCGTCCAAAATCTCGC 59.006 45.455 0.00 0.00 0.00 5.03
57 58 1.722011 TCTTCGTCCAAAATCTCGCC 58.278 50.000 0.00 0.00 0.00 5.54
58 59 0.370273 CTTCGTCCAAAATCTCGCCG 59.630 55.000 0.00 0.00 0.00 6.46
59 60 1.632046 TTCGTCCAAAATCTCGCCGC 61.632 55.000 0.00 0.00 0.00 6.53
60 61 2.399611 GTCCAAAATCTCGCCGCG 59.600 61.111 6.39 6.39 0.00 6.46
61 62 2.047655 TCCAAAATCTCGCCGCGT 60.048 55.556 13.39 0.00 0.00 6.01
62 63 2.098233 TCCAAAATCTCGCCGCGTC 61.098 57.895 13.39 0.00 0.00 5.19
63 64 2.399611 CAAAATCTCGCCGCGTCC 59.600 61.111 13.39 0.00 0.00 4.79
64 65 3.186047 AAAATCTCGCCGCGTCCG 61.186 61.111 13.39 7.81 0.00 4.79
65 66 3.927163 AAAATCTCGCCGCGTCCGT 62.927 57.895 13.39 0.00 0.00 4.69
89 90 2.941453 GAGAGCCTCGACATGTAACA 57.059 50.000 0.00 0.00 0.00 2.41
90 91 3.232213 GAGAGCCTCGACATGTAACAA 57.768 47.619 0.00 0.00 0.00 2.83
91 92 2.924290 GAGAGCCTCGACATGTAACAAC 59.076 50.000 0.00 0.00 0.00 3.32
92 93 2.000447 GAGCCTCGACATGTAACAACC 59.000 52.381 0.00 0.00 0.00 3.77
93 94 0.719465 GCCTCGACATGTAACAACCG 59.281 55.000 0.00 0.00 0.00 4.44
94 95 1.938016 GCCTCGACATGTAACAACCGT 60.938 52.381 0.00 0.00 0.00 4.83
95 96 1.990563 CCTCGACATGTAACAACCGTC 59.009 52.381 0.00 0.00 0.00 4.79
97 98 1.411394 CGACATGTAACAACCGTCGT 58.589 50.000 0.00 0.00 43.26 4.34
98 99 1.123576 CGACATGTAACAACCGTCGTG 59.876 52.381 0.00 0.00 43.26 4.35
99 100 0.863144 ACATGTAACAACCGTCGTGC 59.137 50.000 0.00 0.00 0.00 5.34
100 101 1.144969 CATGTAACAACCGTCGTGCT 58.855 50.000 0.00 0.00 0.00 4.40
101 102 1.126113 CATGTAACAACCGTCGTGCTC 59.874 52.381 0.00 0.00 0.00 4.26
102 103 0.102663 TGTAACAACCGTCGTGCTCA 59.897 50.000 0.00 0.00 0.00 4.26
103 104 1.210870 GTAACAACCGTCGTGCTCAA 58.789 50.000 0.00 0.00 0.00 3.02
104 105 1.071041 GTAACAACCGTCGTGCTCAAC 60.071 52.381 0.00 0.00 0.00 3.18
105 106 1.433837 AACAACCGTCGTGCTCAACC 61.434 55.000 0.00 0.00 0.00 3.77
106 107 1.594293 CAACCGTCGTGCTCAACCT 60.594 57.895 0.00 0.00 0.00 3.50
107 108 1.145377 AACCGTCGTGCTCAACCTT 59.855 52.632 0.00 0.00 0.00 3.50
108 109 0.463116 AACCGTCGTGCTCAACCTTT 60.463 50.000 0.00 0.00 0.00 3.11
109 110 1.157870 ACCGTCGTGCTCAACCTTTG 61.158 55.000 0.00 0.00 0.00 2.77
110 111 1.157870 CCGTCGTGCTCAACCTTTGT 61.158 55.000 0.00 0.00 0.00 2.83
111 112 0.042188 CGTCGTGCTCAACCTTTGTG 60.042 55.000 0.00 0.00 0.00 3.33
116 117 3.557207 GCTCAACCTTTGTGCACTG 57.443 52.632 19.41 6.80 46.32 3.66
117 118 0.031178 GCTCAACCTTTGTGCACTGG 59.969 55.000 19.41 18.55 46.32 4.00
118 119 1.392589 CTCAACCTTTGTGCACTGGT 58.607 50.000 19.41 19.18 0.00 4.00
119 120 2.571212 CTCAACCTTTGTGCACTGGTA 58.429 47.619 22.88 12.26 31.82 3.25
120 121 3.149196 CTCAACCTTTGTGCACTGGTAT 58.851 45.455 22.88 13.94 31.82 2.73
121 122 3.561143 TCAACCTTTGTGCACTGGTATT 58.439 40.909 22.88 11.08 31.82 1.89
122 123 3.317711 TCAACCTTTGTGCACTGGTATTG 59.682 43.478 22.88 19.13 31.82 1.90
123 124 1.613437 ACCTTTGTGCACTGGTATTGC 59.387 47.619 21.84 0.00 40.63 3.56
124 125 1.401409 CCTTTGTGCACTGGTATTGCG 60.401 52.381 19.41 0.00 43.34 4.85
125 126 0.595588 TTTGTGCACTGGTATTGCGG 59.404 50.000 19.41 0.00 43.34 5.69
126 127 0.536233 TTGTGCACTGGTATTGCGGT 60.536 50.000 19.41 0.00 43.34 5.68
127 128 0.536233 TGTGCACTGGTATTGCGGTT 60.536 50.000 19.41 0.00 43.34 4.44
128 129 0.596082 GTGCACTGGTATTGCGGTTT 59.404 50.000 10.32 0.00 43.34 3.27
129 130 0.878416 TGCACTGGTATTGCGGTTTC 59.122 50.000 0.00 0.00 43.34 2.78
130 131 1.165270 GCACTGGTATTGCGGTTTCT 58.835 50.000 0.00 0.00 0.00 2.52
131 132 1.539827 GCACTGGTATTGCGGTTTCTT 59.460 47.619 0.00 0.00 0.00 2.52
132 133 2.745281 GCACTGGTATTGCGGTTTCTTA 59.255 45.455 0.00 0.00 0.00 2.10
133 134 3.425758 GCACTGGTATTGCGGTTTCTTAC 60.426 47.826 0.00 0.00 0.00 2.34
134 135 4.000988 CACTGGTATTGCGGTTTCTTACT 58.999 43.478 0.00 0.00 0.00 2.24
135 136 4.454504 CACTGGTATTGCGGTTTCTTACTT 59.545 41.667 0.00 0.00 0.00 2.24
136 137 5.048991 CACTGGTATTGCGGTTTCTTACTTT 60.049 40.000 0.00 0.00 0.00 2.66
137 138 5.048991 ACTGGTATTGCGGTTTCTTACTTTG 60.049 40.000 0.00 0.00 0.00 2.77
138 139 4.822896 TGGTATTGCGGTTTCTTACTTTGT 59.177 37.500 0.00 0.00 0.00 2.83
139 140 5.049267 TGGTATTGCGGTTTCTTACTTTGTC 60.049 40.000 0.00 0.00 0.00 3.18
140 141 3.974871 TTGCGGTTTCTTACTTTGTCC 57.025 42.857 0.00 0.00 0.00 4.02
141 142 2.920524 TGCGGTTTCTTACTTTGTCCA 58.079 42.857 0.00 0.00 0.00 4.02
142 143 3.280295 TGCGGTTTCTTACTTTGTCCAA 58.720 40.909 0.00 0.00 0.00 3.53
143 144 3.886505 TGCGGTTTCTTACTTTGTCCAAT 59.113 39.130 0.00 0.00 0.00 3.16
144 145 4.339814 TGCGGTTTCTTACTTTGTCCAATT 59.660 37.500 0.00 0.00 0.00 2.32
145 146 5.163499 TGCGGTTTCTTACTTTGTCCAATTT 60.163 36.000 0.00 0.00 0.00 1.82
146 147 5.174943 GCGGTTTCTTACTTTGTCCAATTTG 59.825 40.000 0.00 0.00 0.00 2.32
147 148 6.500041 CGGTTTCTTACTTTGTCCAATTTGA 58.500 36.000 0.00 0.00 0.00 2.69
148 149 6.636850 CGGTTTCTTACTTTGTCCAATTTGAG 59.363 38.462 0.00 0.00 0.00 3.02
149 150 7.468084 CGGTTTCTTACTTTGTCCAATTTGAGA 60.468 37.037 0.00 0.00 0.00 3.27
150 151 8.360390 GGTTTCTTACTTTGTCCAATTTGAGAT 58.640 33.333 0.00 0.00 0.00 2.75
516 517 7.765307 CCAATATGCTGATTCTTACTTTGTGT 58.235 34.615 0.00 0.00 0.00 3.72
517 518 8.246180 CCAATATGCTGATTCTTACTTTGTGTT 58.754 33.333 0.00 0.00 0.00 3.32
518 519 9.630098 CAATATGCTGATTCTTACTTTGTGTTT 57.370 29.630 0.00 0.00 0.00 2.83
520 521 7.935338 ATGCTGATTCTTACTTTGTGTTTTG 57.065 32.000 0.00 0.00 0.00 2.44
521 522 5.748152 TGCTGATTCTTACTTTGTGTTTTGC 59.252 36.000 0.00 0.00 0.00 3.68
522 523 5.175673 GCTGATTCTTACTTTGTGTTTTGCC 59.824 40.000 0.00 0.00 0.00 4.52
523 524 6.463995 TGATTCTTACTTTGTGTTTTGCCT 57.536 33.333 0.00 0.00 0.00 4.75
524 525 6.503524 TGATTCTTACTTTGTGTTTTGCCTC 58.496 36.000 0.00 0.00 0.00 4.70
525 526 4.545823 TCTTACTTTGTGTTTTGCCTCG 57.454 40.909 0.00 0.00 0.00 4.63
526 527 3.314080 TCTTACTTTGTGTTTTGCCTCGG 59.686 43.478 0.00 0.00 0.00 4.63
527 528 0.102300 ACTTTGTGTTTTGCCTCGGC 59.898 50.000 0.00 0.00 42.35 5.54
528 529 0.597377 CTTTGTGTTTTGCCTCGGCC 60.597 55.000 5.33 0.00 41.09 6.13
529 530 2.343163 TTTGTGTTTTGCCTCGGCCG 62.343 55.000 22.12 22.12 41.09 6.13
530 531 3.284449 GTGTTTTGCCTCGGCCGT 61.284 61.111 27.15 0.00 41.09 5.68
531 532 2.517402 TGTTTTGCCTCGGCCGTT 60.517 55.556 27.15 0.00 41.09 4.44
532 533 2.122167 TGTTTTGCCTCGGCCGTTT 61.122 52.632 27.15 0.00 41.09 3.60
533 534 1.066752 GTTTTGCCTCGGCCGTTTT 59.933 52.632 27.15 0.00 41.09 2.43
534 535 0.528901 GTTTTGCCTCGGCCGTTTTT 60.529 50.000 27.15 0.00 41.09 1.94
535 536 0.528684 TTTTGCCTCGGCCGTTTTTG 60.529 50.000 27.15 11.15 41.09 2.44
536 537 1.668101 TTTGCCTCGGCCGTTTTTGT 61.668 50.000 27.15 0.00 41.09 2.83
537 538 2.065906 TTGCCTCGGCCGTTTTTGTC 62.066 55.000 27.15 8.98 41.09 3.18
538 539 2.554272 CCTCGGCCGTTTTTGTCG 59.446 61.111 27.15 4.44 0.00 4.35
539 540 1.957186 CCTCGGCCGTTTTTGTCGA 60.957 57.895 27.15 0.17 0.00 4.20
540 541 1.500512 CCTCGGCCGTTTTTGTCGAA 61.501 55.000 27.15 0.00 0.00 3.71
541 542 0.305313 CTCGGCCGTTTTTGTCGAAA 59.695 50.000 27.15 0.00 0.00 3.46
542 543 0.945813 TCGGCCGTTTTTGTCGAAAT 59.054 45.000 27.15 0.00 0.00 2.17
543 544 1.069771 TCGGCCGTTTTTGTCGAAATC 60.070 47.619 27.15 0.00 0.00 2.17
544 545 1.334239 CGGCCGTTTTTGTCGAAATCA 60.334 47.619 19.50 0.00 0.00 2.57
545 546 2.048498 GGCCGTTTTTGTCGAAATCAC 58.952 47.619 0.00 0.00 0.00 3.06
546 547 2.287368 GGCCGTTTTTGTCGAAATCACT 60.287 45.455 0.00 0.00 0.00 3.41
547 548 3.058777 GGCCGTTTTTGTCGAAATCACTA 60.059 43.478 0.00 0.00 0.00 2.74
548 549 4.148891 GCCGTTTTTGTCGAAATCACTAG 58.851 43.478 0.00 0.00 0.00 2.57
549 550 4.319261 GCCGTTTTTGTCGAAATCACTAGT 60.319 41.667 0.00 0.00 0.00 2.57
550 551 5.744490 CCGTTTTTGTCGAAATCACTAGTT 58.256 37.500 0.00 0.00 0.00 2.24
551 552 5.619607 CCGTTTTTGTCGAAATCACTAGTTG 59.380 40.000 0.00 0.00 0.00 3.16
552 553 6.415702 CGTTTTTGTCGAAATCACTAGTTGA 58.584 36.000 0.00 0.00 39.11 3.18
553 554 6.570058 CGTTTTTGTCGAAATCACTAGTTGAG 59.430 38.462 0.00 0.00 37.77 3.02
554 555 6.539649 TTTTGTCGAAATCACTAGTTGAGG 57.460 37.500 0.00 0.00 37.77 3.86
555 556 5.462530 TTGTCGAAATCACTAGTTGAGGA 57.537 39.130 0.00 0.00 37.77 3.71
556 557 5.060662 TGTCGAAATCACTAGTTGAGGAG 57.939 43.478 0.00 0.00 37.77 3.69
557 558 4.523173 TGTCGAAATCACTAGTTGAGGAGT 59.477 41.667 0.00 0.00 37.77 3.85
558 559 5.708697 TGTCGAAATCACTAGTTGAGGAGTA 59.291 40.000 0.00 0.00 37.77 2.59
559 560 6.028987 GTCGAAATCACTAGTTGAGGAGTAC 58.971 44.000 0.00 0.00 37.77 2.73
560 561 5.944599 TCGAAATCACTAGTTGAGGAGTACT 59.055 40.000 0.00 0.00 37.77 2.73
561 562 6.093771 TCGAAATCACTAGTTGAGGAGTACTC 59.906 42.308 14.87 14.87 46.78 2.59
572 573 3.650139 GAGGAGTACTCGTTGCAAAAGA 58.350 45.455 18.54 10.56 36.29 2.52
573 574 4.246458 GAGGAGTACTCGTTGCAAAAGAT 58.754 43.478 18.54 5.61 36.29 2.40
574 575 4.642429 AGGAGTACTCGTTGCAAAAGATT 58.358 39.130 16.56 8.64 32.89 2.40
575 576 5.790593 AGGAGTACTCGTTGCAAAAGATTA 58.209 37.500 16.56 7.79 32.89 1.75
576 577 5.638234 AGGAGTACTCGTTGCAAAAGATTAC 59.362 40.000 16.56 18.03 39.48 1.89
578 579 6.707599 AGTACTCGTTGCAAAAGATTACTC 57.292 37.500 20.58 6.68 43.38 2.59
579 580 5.638234 AGTACTCGTTGCAAAAGATTACTCC 59.362 40.000 20.58 6.20 43.38 3.85
580 581 4.385825 ACTCGTTGCAAAAGATTACTCCA 58.614 39.130 15.11 0.00 32.89 3.86
581 582 4.819630 ACTCGTTGCAAAAGATTACTCCAA 59.180 37.500 15.11 0.00 32.89 3.53
582 583 5.103290 TCGTTGCAAAAGATTACTCCAAC 57.897 39.130 0.00 0.00 26.63 3.77
583 584 4.023536 TCGTTGCAAAAGATTACTCCAACC 60.024 41.667 0.00 0.00 26.63 3.77
584 585 4.023193 CGTTGCAAAAGATTACTCCAACCT 60.023 41.667 0.00 0.00 0.00 3.50
585 586 5.507315 CGTTGCAAAAGATTACTCCAACCTT 60.507 40.000 0.00 0.00 0.00 3.50
586 587 5.705609 TGCAAAAGATTACTCCAACCTTC 57.294 39.130 0.00 0.00 0.00 3.46
587 588 4.215399 TGCAAAAGATTACTCCAACCTTCG 59.785 41.667 0.00 0.00 0.00 3.79
588 589 4.723248 CAAAAGATTACTCCAACCTTCGC 58.277 43.478 0.00 0.00 0.00 4.70
589 590 3.695830 AAGATTACTCCAACCTTCGCA 57.304 42.857 0.00 0.00 0.00 5.10
590 591 3.252974 AGATTACTCCAACCTTCGCAG 57.747 47.619 0.00 0.00 0.00 5.18
592 593 0.321298 TTACTCCAACCTTCGCAGGC 60.321 55.000 0.00 0.00 45.56 4.85
593 594 1.192146 TACTCCAACCTTCGCAGGCT 61.192 55.000 0.00 0.00 45.56 4.58
594 595 1.192146 ACTCCAACCTTCGCAGGCTA 61.192 55.000 0.00 0.00 45.56 3.93
595 596 0.179000 CTCCAACCTTCGCAGGCTAT 59.821 55.000 0.00 0.00 45.56 2.97
596 597 0.107703 TCCAACCTTCGCAGGCTATG 60.108 55.000 0.00 0.00 45.56 2.23
597 598 0.107703 CCAACCTTCGCAGGCTATGA 60.108 55.000 0.00 0.00 45.56 2.15
598 599 1.009829 CAACCTTCGCAGGCTATGAC 58.990 55.000 0.00 0.00 45.56 3.06
599 600 0.460284 AACCTTCGCAGGCTATGACG 60.460 55.000 0.00 0.00 45.56 4.35
600 601 1.320344 ACCTTCGCAGGCTATGACGA 61.320 55.000 0.00 0.00 45.56 4.20
601 602 0.179111 CCTTCGCAGGCTATGACGAA 60.179 55.000 11.57 11.57 41.67 3.85
602 603 1.539065 CCTTCGCAGGCTATGACGAAT 60.539 52.381 12.24 0.00 42.38 3.34
603 604 1.789464 CTTCGCAGGCTATGACGAATC 59.211 52.381 12.24 0.00 42.38 2.52
604 605 1.032794 TCGCAGGCTATGACGAATCT 58.967 50.000 0.00 0.00 35.50 2.40
605 606 1.409064 TCGCAGGCTATGACGAATCTT 59.591 47.619 0.00 0.00 35.50 2.40
606 607 2.621526 TCGCAGGCTATGACGAATCTTA 59.378 45.455 0.00 0.00 35.50 2.10
607 608 3.067601 TCGCAGGCTATGACGAATCTTAA 59.932 43.478 0.00 0.00 35.50 1.85
608 609 3.802139 CGCAGGCTATGACGAATCTTAAA 59.198 43.478 0.00 0.00 32.43 1.52
609 610 4.084849 CGCAGGCTATGACGAATCTTAAAG 60.085 45.833 0.00 0.00 32.43 1.85
610 611 5.050490 GCAGGCTATGACGAATCTTAAAGA 58.950 41.667 0.00 0.00 0.00 2.52
611 612 5.698545 GCAGGCTATGACGAATCTTAAAGAT 59.301 40.000 0.00 0.00 36.28 2.40
612 613 6.203723 GCAGGCTATGACGAATCTTAAAGATT 59.796 38.462 0.00 0.00 46.84 2.40
613 614 7.254932 GCAGGCTATGACGAATCTTAAAGATTT 60.255 37.037 0.00 0.00 44.41 2.17
614 615 9.261180 CAGGCTATGACGAATCTTAAAGATTTA 57.739 33.333 0.00 0.00 44.41 1.40
619 620 7.857734 TGACGAATCTTAAAGATTTATGGCA 57.142 32.000 0.00 0.00 44.41 4.92
620 621 8.275015 TGACGAATCTTAAAGATTTATGGCAA 57.725 30.769 0.00 0.00 44.41 4.52
621 622 8.902806 TGACGAATCTTAAAGATTTATGGCAAT 58.097 29.630 0.00 0.00 44.41 3.56
622 623 9.736023 GACGAATCTTAAAGATTTATGGCAATT 57.264 29.630 0.00 0.00 44.41 2.32
666 667 4.701651 CACTTACCAAGCTGATGGATTCAA 59.298 41.667 11.52 0.00 43.54 2.69
670 671 2.357465 CCAAGCTGATGGATTCAAGGGA 60.357 50.000 0.00 0.00 43.54 4.20
685 686 1.698506 AGGGACGATCCATCACTCTC 58.301 55.000 6.41 0.00 38.64 3.20
705 706 0.436531 GAAGTCAAGCTTCGACGCAG 59.563 55.000 16.85 8.25 43.41 5.18
904 916 4.394712 CTGTCGCCTCCCGCCTTT 62.395 66.667 0.00 0.00 36.73 3.11
957 981 3.257561 CCCACGCAAGCTCGATCG 61.258 66.667 9.36 9.36 45.62 3.69
961 985 1.299468 ACGCAAGCTCGATCGATCC 60.299 57.895 19.78 12.72 45.62 3.36
1010 1035 1.815003 GCTAAGCTCAAAGCCACACAT 59.185 47.619 4.71 0.00 43.77 3.21
1011 1036 2.159462 GCTAAGCTCAAAGCCACACATC 60.159 50.000 4.71 0.00 43.77 3.06
1012 1037 1.251251 AAGCTCAAAGCCACACATCC 58.749 50.000 0.00 0.00 43.77 3.51
1013 1038 0.403271 AGCTCAAAGCCACACATCCT 59.597 50.000 0.00 0.00 43.77 3.24
1014 1039 1.202976 AGCTCAAAGCCACACATCCTT 60.203 47.619 0.00 0.00 43.77 3.36
1029 1054 2.806608 TCCTTCCACACACGAACTAC 57.193 50.000 0.00 0.00 0.00 2.73
1030 1055 2.313317 TCCTTCCACACACGAACTACT 58.687 47.619 0.00 0.00 0.00 2.57
1031 1056 3.489355 TCCTTCCACACACGAACTACTA 58.511 45.455 0.00 0.00 0.00 1.82
1032 1057 3.254166 TCCTTCCACACACGAACTACTAC 59.746 47.826 0.00 0.00 0.00 2.73
1033 1058 3.005050 CCTTCCACACACGAACTACTACA 59.995 47.826 0.00 0.00 0.00 2.74
1034 1059 4.500205 CCTTCCACACACGAACTACTACAA 60.500 45.833 0.00 0.00 0.00 2.41
1035 1060 3.968649 TCCACACACGAACTACTACAAC 58.031 45.455 0.00 0.00 0.00 3.32
1036 1061 2.722629 CCACACACGAACTACTACAACG 59.277 50.000 0.00 0.00 0.00 4.10
1037 1062 3.548616 CCACACACGAACTACTACAACGA 60.549 47.826 0.00 0.00 0.00 3.85
1169 1200 3.353689 ATCAGAGGGGGACTGGGGG 62.354 68.421 0.00 0.00 36.22 5.40
1472 1503 4.449161 CGCGTTCACGTTCGAGCG 62.449 66.667 20.50 20.50 41.85 5.03
1474 1505 3.097728 CGTTCACGTTCGAGCGCT 61.098 61.111 21.99 11.27 32.90 5.92
1566 1603 0.938926 AGGAGGAGGAGGAAGGGGAT 60.939 60.000 0.00 0.00 0.00 3.85
1770 1813 0.818296 GGAGGCGCTTCTTCTACTCA 59.182 55.000 19.65 0.00 0.00 3.41
2116 2159 3.430862 CCACCACGACCGCCATTG 61.431 66.667 0.00 0.00 0.00 2.82
2122 2168 2.741985 CGACCGCCATTGACAGCA 60.742 61.111 0.00 0.00 0.00 4.41
2199 2251 1.254284 ACCAGAGCTTCTCCGGTCAG 61.254 60.000 0.00 0.00 36.66 3.51
2295 2347 2.549754 CGGCATTGACTTCTGTGACTTT 59.450 45.455 0.00 0.00 0.00 2.66
2354 2430 7.706179 GGACTTCAATTTCTGATACTCTCTCAG 59.294 40.741 0.00 0.00 41.23 3.35
2364 2440 5.146298 TGATACTCTCTCAGCCTGATGAAT 58.854 41.667 0.00 0.00 0.00 2.57
2416 2494 8.966155 AGGAGATTAATTTTAAACCAAAGGGA 57.034 30.769 0.00 0.00 38.05 4.20
2440 2521 2.357009 ACTAGCATGCACAGCAATTAGC 59.643 45.455 21.98 0.00 43.62 3.09
2513 2608 4.096833 CCACCATGACGATGACATTGATTT 59.903 41.667 9.78 0.00 0.00 2.17
2560 2655 9.624373 AATTGAGATGCTAAAGTGACAGATAAT 57.376 29.630 0.00 0.00 0.00 1.28
2568 2663 7.280876 TGCTAAAGTGACAGATAATGATCCAAC 59.719 37.037 0.00 0.00 31.81 3.77
2587 2684 4.379813 CCAACTGTACATTGATCCAACTGC 60.380 45.833 15.37 0.00 0.00 4.40
2637 2737 3.628017 CAACTTTTGCCAAGTTACTCGG 58.372 45.455 10.05 0.00 38.32 4.63
2638 2738 2.227194 ACTTTTGCCAAGTTACTCGGG 58.773 47.619 0.00 0.00 0.00 5.14
2639 2739 2.227194 CTTTTGCCAAGTTACTCGGGT 58.773 47.619 0.00 0.00 0.00 5.28
2640 2740 2.351706 TTTGCCAAGTTACTCGGGTT 57.648 45.000 0.00 0.00 0.00 4.11
2648 2748 0.958876 GTTACTCGGGTTTGGCTGGG 60.959 60.000 0.00 0.00 0.00 4.45
2652 2752 2.203567 CGGGTTTGGCTGGGGAAA 60.204 61.111 0.00 0.00 0.00 3.13
2681 2781 0.315886 TGCTTCAGTTGCAGGCATTG 59.684 50.000 0.00 0.00 35.31 2.82
2682 2782 0.599558 GCTTCAGTTGCAGGCATTGA 59.400 50.000 0.00 0.00 0.00 2.57
2684 2784 2.876091 CTTCAGTTGCAGGCATTGATG 58.124 47.619 9.00 8.11 0.00 3.07
2685 2785 1.913778 TCAGTTGCAGGCATTGATGT 58.086 45.000 0.00 0.00 0.00 3.06
2686 2786 1.542472 TCAGTTGCAGGCATTGATGTG 59.458 47.619 0.00 0.00 0.00 3.21
2687 2787 1.271379 CAGTTGCAGGCATTGATGTGT 59.729 47.619 0.00 0.00 0.00 3.72
2688 2788 1.542915 AGTTGCAGGCATTGATGTGTC 59.457 47.619 0.00 0.00 0.00 3.67
2689 2789 1.270274 GTTGCAGGCATTGATGTGTCA 59.730 47.619 0.00 0.00 0.00 3.58
2691 2791 1.270274 TGCAGGCATTGATGTGTCAAC 59.730 47.619 0.00 0.00 46.43 3.18
2692 2792 1.542915 GCAGGCATTGATGTGTCAACT 59.457 47.619 0.00 0.00 46.43 3.16
2693 2793 2.670229 GCAGGCATTGATGTGTCAACTG 60.670 50.000 0.00 0.00 46.43 3.16
2694 2794 2.094906 CAGGCATTGATGTGTCAACTGG 60.095 50.000 0.00 0.00 46.43 4.00
2695 2795 1.403249 GGCATTGATGTGTCAACTGGC 60.403 52.381 0.00 3.15 46.43 4.85
2696 2796 1.270274 GCATTGATGTGTCAACTGGCA 59.730 47.619 0.00 0.00 46.43 4.92
2708 2808 6.641169 TGTCAACTGGCACAACATTATTAA 57.359 33.333 0.00 0.00 38.70 1.40
2709 2809 6.676950 TGTCAACTGGCACAACATTATTAAG 58.323 36.000 0.00 0.00 38.70 1.85
2710 2810 6.264292 TGTCAACTGGCACAACATTATTAAGT 59.736 34.615 0.00 0.00 38.70 2.24
2711 2811 7.445707 TGTCAACTGGCACAACATTATTAAGTA 59.554 33.333 0.00 0.00 38.70 2.24
2712 2812 7.749126 GTCAACTGGCACAACATTATTAAGTAC 59.251 37.037 0.00 0.00 38.70 2.73
2713 2813 7.663905 TCAACTGGCACAACATTATTAAGTACT 59.336 33.333 0.00 0.00 38.70 2.73
2714 2814 7.611213 ACTGGCACAACATTATTAAGTACTC 57.389 36.000 0.00 0.00 38.70 2.59
2715 2815 6.598064 ACTGGCACAACATTATTAAGTACTCC 59.402 38.462 0.00 0.00 38.70 3.85
2716 2816 5.883673 TGGCACAACATTATTAAGTACTCCC 59.116 40.000 0.00 0.00 31.92 4.30
2717 2817 6.120220 GGCACAACATTATTAAGTACTCCCT 58.880 40.000 0.00 0.00 0.00 4.20
2718 2818 6.260271 GGCACAACATTATTAAGTACTCCCTC 59.740 42.308 0.00 0.00 0.00 4.30
2719 2819 7.048512 GCACAACATTATTAAGTACTCCCTCT 58.951 38.462 0.00 0.00 0.00 3.69
2720 2820 7.011482 GCACAACATTATTAAGTACTCCCTCTG 59.989 40.741 0.00 0.00 0.00 3.35
2721 2821 8.041323 CACAACATTATTAAGTACTCCCTCTGT 58.959 37.037 0.00 0.00 0.00 3.41
2722 2822 8.603304 ACAACATTATTAAGTACTCCCTCTGTT 58.397 33.333 0.00 0.15 0.00 3.16
2723 2823 9.449719 CAACATTATTAAGTACTCCCTCTGTTT 57.550 33.333 0.00 0.00 0.00 2.83
2724 2824 9.668497 AACATTATTAAGTACTCCCTCTGTTTC 57.332 33.333 0.00 0.00 0.00 2.78
2725 2825 8.822805 ACATTATTAAGTACTCCCTCTGTTTCA 58.177 33.333 0.00 0.00 0.00 2.69
2726 2826 9.838339 CATTATTAAGTACTCCCTCTGTTTCAT 57.162 33.333 0.00 0.00 0.00 2.57
2730 2830 9.838339 ATTAAGTACTCCCTCTGTTTCATAATG 57.162 33.333 0.00 0.00 0.00 1.90
2731 2831 6.875972 AGTACTCCCTCTGTTTCATAATGT 57.124 37.500 0.00 0.00 0.00 2.71
2732 2832 7.973048 AGTACTCCCTCTGTTTCATAATGTA 57.027 36.000 0.00 0.00 0.00 2.29
2733 2833 8.375493 AGTACTCCCTCTGTTTCATAATGTAA 57.625 34.615 0.00 0.00 0.00 2.41
2734 2834 8.478877 AGTACTCCCTCTGTTTCATAATGTAAG 58.521 37.037 0.00 0.00 0.00 2.34
2735 2835 7.496346 ACTCCCTCTGTTTCATAATGTAAGA 57.504 36.000 0.00 0.00 0.00 2.10
2736 2836 7.331791 ACTCCCTCTGTTTCATAATGTAAGAC 58.668 38.462 0.00 0.00 0.00 3.01
2737 2837 6.338146 TCCCTCTGTTTCATAATGTAAGACG 58.662 40.000 0.00 0.00 0.00 4.18
2738 2838 6.070995 TCCCTCTGTTTCATAATGTAAGACGT 60.071 38.462 0.00 0.00 0.00 4.34
2739 2839 6.594159 CCCTCTGTTTCATAATGTAAGACGTT 59.406 38.462 0.00 0.00 0.00 3.99
2740 2840 7.119262 CCCTCTGTTTCATAATGTAAGACGTTT 59.881 37.037 0.00 0.00 0.00 3.60
2741 2841 8.504005 CCTCTGTTTCATAATGTAAGACGTTTT 58.496 33.333 0.00 0.00 0.00 2.43
2742 2842 9.878599 CTCTGTTTCATAATGTAAGACGTTTTT 57.121 29.630 0.00 0.00 0.00 1.94
2788 2888 9.471084 AAAAAGTTTTACATTATGAAACGAGGG 57.529 29.630 0.24 0.00 40.75 4.30
2789 2889 6.753107 AGTTTTACATTATGAAACGAGGGG 57.247 37.500 0.00 0.00 40.75 4.79
2907 3010 9.780186 AAGTTTACCTTGCAGGAAGATATATAC 57.220 33.333 2.61 0.00 37.67 1.47
2908 3011 9.160412 AGTTTACCTTGCAGGAAGATATATACT 57.840 33.333 2.61 1.62 37.67 2.12
2929 3033 8.928270 ATACTTCCTCTGTAAACGAATACAAG 57.072 34.615 0.00 0.00 35.48 3.16
2930 3034 6.989659 ACTTCCTCTGTAAACGAATACAAGA 58.010 36.000 0.00 0.00 35.48 3.02
2931 3035 6.867293 ACTTCCTCTGTAAACGAATACAAGAC 59.133 38.462 0.00 0.00 35.48 3.01
2932 3036 5.396484 TCCTCTGTAAACGAATACAAGACG 58.604 41.667 0.00 0.00 35.48 4.18
2933 3037 5.048504 TCCTCTGTAAACGAATACAAGACGT 60.049 40.000 0.00 0.00 41.97 4.34
2940 3044 5.488645 AACGAATACAAGACGTTTTTGGT 57.511 34.783 15.36 3.54 45.58 3.67
2941 3045 5.086888 ACGAATACAAGACGTTTTTGGTC 57.913 39.130 15.36 9.79 36.91 4.02
2942 3046 4.571580 ACGAATACAAGACGTTTTTGGTCA 59.428 37.500 15.36 4.07 36.91 4.02
2943 3047 4.901881 CGAATACAAGACGTTTTTGGTCAC 59.098 41.667 15.36 6.17 36.87 3.67
2944 3048 5.277154 CGAATACAAGACGTTTTTGGTCACT 60.277 40.000 15.36 0.81 36.87 3.41
2945 3049 6.074195 CGAATACAAGACGTTTTTGGTCACTA 60.074 38.462 15.36 2.59 36.87 2.74
2946 3050 7.517101 CGAATACAAGACGTTTTTGGTCACTAA 60.517 37.037 15.36 0.00 36.87 2.24
2947 3051 5.883503 ACAAGACGTTTTTGGTCACTAAA 57.116 34.783 15.36 0.00 36.87 1.85
2948 3052 5.633927 ACAAGACGTTTTTGGTCACTAAAC 58.366 37.500 15.36 0.00 36.87 2.01
2952 3056 4.525411 CGTTTTTGGTCACTAAACGTCT 57.475 40.909 15.82 0.00 45.26 4.18
3043 3147 4.182693 TGGACCACGTCTATTAGTGTTG 57.817 45.455 0.00 0.00 36.69 3.33
3103 3208 2.490328 AACATGTGTCCAACGCTTTG 57.510 45.000 0.00 0.00 0.00 2.77
3180 3290 7.853524 TGTACATTTAGTTTTCTAACACGGTG 58.146 34.615 6.58 6.58 41.43 4.94
3181 3291 6.930667 ACATTTAGTTTTCTAACACGGTGT 57.069 33.333 8.21 8.21 41.43 4.16
3189 3299 5.276536 GTTTTCTAACACGGTGTAGACACAC 60.277 44.000 15.11 4.68 42.63 3.82
3261 3376 1.205893 CCTATCCTTATGAGCGCCTCC 59.794 57.143 2.29 0.00 0.00 4.30
3285 3400 4.958509 AGAGACTGAGCCAACATATCATG 58.041 43.478 0.00 0.00 0.00 3.07
3320 3435 6.151144 ACAAAATCACTATAGGTGCCTTGTTC 59.849 38.462 4.43 0.00 44.98 3.18
3363 3478 0.447406 TGAACATGCATCGCCGAAAG 59.553 50.000 0.00 0.00 0.00 2.62
3378 3493 7.548196 TCGCCGAAAGTTATGAAATAAATCT 57.452 32.000 0.00 0.00 41.12 2.40
3396 3511 9.878599 AATAAATCTAGAAAAATGCGAATACCG 57.121 29.630 0.00 0.00 42.21 4.02
3440 3634 6.636454 TTGAAATACCACTGTCCTCCTAAT 57.364 37.500 0.00 0.00 0.00 1.73
3446 3640 2.036475 CCACTGTCCTCCTAATCATCCG 59.964 54.545 0.00 0.00 0.00 4.18
3478 3722 5.159273 TGGTTCACAGCTAATGTACATCA 57.841 39.130 9.23 0.00 41.41 3.07
3505 3749 3.265489 AGGGAAAGAATGGGTTACCTGA 58.735 45.455 0.00 0.00 37.76 3.86
3509 3753 1.946984 AGAATGGGTTACCTGACGGA 58.053 50.000 0.00 0.00 37.76 4.69
3511 3755 2.027469 AGAATGGGTTACCTGACGGAAC 60.027 50.000 0.00 0.00 37.76 3.62
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.287457 TAGGGACGATTCCAACGGCG 62.287 60.000 4.80 4.80 44.98 6.46
1 2 0.808847 GTAGGGACGATTCCAACGGC 60.809 60.000 0.00 0.00 44.98 5.68
2 3 0.179092 GGTAGGGACGATTCCAACGG 60.179 60.000 0.00 0.00 44.98 4.44
4 5 1.138464 GAGGGTAGGGACGATTCCAAC 59.862 57.143 0.00 0.00 44.98 3.77
6 7 0.754217 CGAGGGTAGGGACGATTCCA 60.754 60.000 0.00 0.00 44.98 3.53
7 8 2.039509 CGAGGGTAGGGACGATTCC 58.960 63.158 0.00 0.00 41.95 3.01
8 9 1.363080 GCGAGGGTAGGGACGATTC 59.637 63.158 0.00 0.00 0.00 2.52
9 10 2.132352 GGCGAGGGTAGGGACGATT 61.132 63.158 0.00 0.00 0.00 3.34
10 11 2.521224 GGCGAGGGTAGGGACGAT 60.521 66.667 0.00 0.00 0.00 3.73
13 14 2.757099 TTCGGCGAGGGTAGGGAC 60.757 66.667 10.46 0.00 0.00 4.46
14 15 2.441532 CTTCGGCGAGGGTAGGGA 60.442 66.667 11.60 0.00 0.00 4.20
15 16 2.758737 ACTTCGGCGAGGGTAGGG 60.759 66.667 23.15 5.53 0.00 3.53
16 17 2.494918 CACTTCGGCGAGGGTAGG 59.505 66.667 23.15 5.97 0.00 3.18
17 18 2.202756 GCACTTCGGCGAGGGTAG 60.203 66.667 23.15 14.01 0.00 3.18
18 19 2.678934 AGCACTTCGGCGAGGGTA 60.679 61.111 23.15 0.89 39.27 3.69
19 20 4.070552 GAGCACTTCGGCGAGGGT 62.071 66.667 23.15 16.56 39.27 4.34
20 21 3.302347 AAGAGCACTTCGGCGAGGG 62.302 63.158 23.15 15.92 39.27 4.30
21 22 1.807573 GAAGAGCACTTCGGCGAGG 60.808 63.158 17.99 17.99 42.14 4.63
22 23 3.773974 GAAGAGCACTTCGGCGAG 58.226 61.111 10.46 7.26 42.14 5.03
29 30 2.910688 TTGGACGAAGAAGAGCACTT 57.089 45.000 0.00 0.00 39.24 3.16
30 31 2.910688 TTTGGACGAAGAAGAGCACT 57.089 45.000 0.00 0.00 0.00 4.40
31 32 3.748568 AGATTTTGGACGAAGAAGAGCAC 59.251 43.478 0.00 0.00 0.00 4.40
32 33 3.997021 GAGATTTTGGACGAAGAAGAGCA 59.003 43.478 0.00 0.00 0.00 4.26
33 34 3.061429 CGAGATTTTGGACGAAGAAGAGC 59.939 47.826 0.00 0.00 0.00 4.09
34 35 3.061429 GCGAGATTTTGGACGAAGAAGAG 59.939 47.826 0.00 0.00 0.00 2.85
35 36 2.993899 GCGAGATTTTGGACGAAGAAGA 59.006 45.455 0.00 0.00 0.00 2.87
36 37 2.094417 GGCGAGATTTTGGACGAAGAAG 59.906 50.000 0.00 0.00 0.00 2.85
37 38 2.073816 GGCGAGATTTTGGACGAAGAA 58.926 47.619 0.00 0.00 0.00 2.52
38 39 1.722011 GGCGAGATTTTGGACGAAGA 58.278 50.000 0.00 0.00 0.00 2.87
39 40 0.370273 CGGCGAGATTTTGGACGAAG 59.630 55.000 0.00 0.00 0.00 3.79
40 41 1.632046 GCGGCGAGATTTTGGACGAA 61.632 55.000 12.98 0.00 0.00 3.85
41 42 2.098233 GCGGCGAGATTTTGGACGA 61.098 57.895 12.98 0.00 0.00 4.20
42 43 2.399611 GCGGCGAGATTTTGGACG 59.600 61.111 12.98 0.00 0.00 4.79
43 44 2.292802 GACGCGGCGAGATTTTGGAC 62.293 60.000 30.94 3.25 0.00 4.02
44 45 2.047655 ACGCGGCGAGATTTTGGA 60.048 55.556 30.94 0.00 0.00 3.53
45 46 2.399611 GACGCGGCGAGATTTTGG 59.600 61.111 30.94 0.00 0.00 3.28
46 47 2.399611 GGACGCGGCGAGATTTTG 59.600 61.111 30.94 0.00 0.00 2.44
47 48 3.186047 CGGACGCGGCGAGATTTT 61.186 61.111 30.94 4.72 0.00 1.82
48 49 4.430765 ACGGACGCGGCGAGATTT 62.431 61.111 30.94 5.61 0.00 2.17
70 71 2.924290 GTTGTTACATGTCGAGGCTCTC 59.076 50.000 13.50 6.30 0.00 3.20
71 72 2.353803 GGTTGTTACATGTCGAGGCTCT 60.354 50.000 13.50 0.00 0.00 4.09
72 73 2.000447 GGTTGTTACATGTCGAGGCTC 59.000 52.381 0.00 3.87 0.00 4.70
73 74 1.671850 CGGTTGTTACATGTCGAGGCT 60.672 52.381 0.00 0.00 0.00 4.58
74 75 0.719465 CGGTTGTTACATGTCGAGGC 59.281 55.000 0.00 0.00 0.00 4.70
75 76 1.990563 GACGGTTGTTACATGTCGAGG 59.009 52.381 0.00 0.00 0.00 4.63
79 80 1.136446 GCACGACGGTTGTTACATGTC 60.136 52.381 0.00 0.00 0.00 3.06
80 81 0.863144 GCACGACGGTTGTTACATGT 59.137 50.000 2.69 2.69 0.00 3.21
81 82 1.126113 GAGCACGACGGTTGTTACATG 59.874 52.381 0.00 0.00 0.00 3.21
82 83 1.269883 TGAGCACGACGGTTGTTACAT 60.270 47.619 0.00 0.00 0.00 2.29
83 84 0.102663 TGAGCACGACGGTTGTTACA 59.897 50.000 0.00 0.00 0.00 2.41
84 85 1.071041 GTTGAGCACGACGGTTGTTAC 60.071 52.381 0.00 0.00 0.00 2.50
85 86 1.210870 GTTGAGCACGACGGTTGTTA 58.789 50.000 0.00 0.00 0.00 2.41
86 87 1.433837 GGTTGAGCACGACGGTTGTT 61.434 55.000 0.00 0.00 0.00 2.83
87 88 1.885850 GGTTGAGCACGACGGTTGT 60.886 57.895 0.00 0.00 0.00 3.32
88 89 1.157870 AAGGTTGAGCACGACGGTTG 61.158 55.000 0.00 0.00 0.00 3.77
89 90 0.463116 AAAGGTTGAGCACGACGGTT 60.463 50.000 0.00 0.00 0.00 4.44
90 91 1.145377 AAAGGTTGAGCACGACGGT 59.855 52.632 0.00 0.00 0.00 4.83
91 92 1.157870 ACAAAGGTTGAGCACGACGG 61.158 55.000 0.00 0.00 0.00 4.79
92 93 0.042188 CACAAAGGTTGAGCACGACG 60.042 55.000 0.00 0.00 0.00 5.12
93 94 0.317020 GCACAAAGGTTGAGCACGAC 60.317 55.000 5.66 0.00 44.96 4.34
94 95 2.021722 GCACAAAGGTTGAGCACGA 58.978 52.632 5.66 0.00 44.96 4.35
95 96 4.614673 GCACAAAGGTTGAGCACG 57.385 55.556 5.66 0.00 44.96 5.34
98 99 0.031178 CCAGTGCACAAAGGTTGAGC 59.969 55.000 21.04 3.80 45.67 4.26
99 100 1.392589 ACCAGTGCACAAAGGTTGAG 58.607 50.000 21.04 4.32 0.00 3.02
100 101 2.719531 TACCAGTGCACAAAGGTTGA 57.280 45.000 26.55 12.41 35.62 3.18
101 102 3.641648 CAATACCAGTGCACAAAGGTTG 58.358 45.455 26.55 18.45 35.62 3.77
102 103 2.035832 GCAATACCAGTGCACAAAGGTT 59.964 45.455 26.55 15.29 41.80 3.50
103 104 1.613437 GCAATACCAGTGCACAAAGGT 59.387 47.619 25.29 25.29 41.80 3.50
104 105 1.401409 CGCAATACCAGTGCACAAAGG 60.401 52.381 21.04 19.27 42.33 3.11
105 106 1.401409 CCGCAATACCAGTGCACAAAG 60.401 52.381 21.04 9.44 42.33 2.77
106 107 0.595588 CCGCAATACCAGTGCACAAA 59.404 50.000 21.04 0.89 42.33 2.83
107 108 0.536233 ACCGCAATACCAGTGCACAA 60.536 50.000 21.04 1.29 42.33 3.33
108 109 0.536233 AACCGCAATACCAGTGCACA 60.536 50.000 21.04 0.00 42.33 4.57
109 110 0.596082 AAACCGCAATACCAGTGCAC 59.404 50.000 9.40 9.40 42.33 4.57
110 111 0.878416 GAAACCGCAATACCAGTGCA 59.122 50.000 0.00 0.00 42.33 4.57
111 112 1.165270 AGAAACCGCAATACCAGTGC 58.835 50.000 0.00 0.00 38.68 4.40
112 113 4.000988 AGTAAGAAACCGCAATACCAGTG 58.999 43.478 0.00 0.00 0.00 3.66
113 114 4.281898 AGTAAGAAACCGCAATACCAGT 57.718 40.909 0.00 0.00 0.00 4.00
114 115 5.048991 ACAAAGTAAGAAACCGCAATACCAG 60.049 40.000 0.00 0.00 0.00 4.00
115 116 4.822896 ACAAAGTAAGAAACCGCAATACCA 59.177 37.500 0.00 0.00 0.00 3.25
116 117 5.366829 ACAAAGTAAGAAACCGCAATACC 57.633 39.130 0.00 0.00 0.00 2.73
117 118 5.049267 TGGACAAAGTAAGAAACCGCAATAC 60.049 40.000 0.00 0.00 0.00 1.89
118 119 5.064558 TGGACAAAGTAAGAAACCGCAATA 58.935 37.500 0.00 0.00 0.00 1.90
119 120 3.886505 TGGACAAAGTAAGAAACCGCAAT 59.113 39.130 0.00 0.00 0.00 3.56
120 121 3.280295 TGGACAAAGTAAGAAACCGCAA 58.720 40.909 0.00 0.00 0.00 4.85
121 122 2.920524 TGGACAAAGTAAGAAACCGCA 58.079 42.857 0.00 0.00 0.00 5.69
122 123 3.974871 TTGGACAAAGTAAGAAACCGC 57.025 42.857 0.00 0.00 0.00 5.68
123 124 6.500041 TCAAATTGGACAAAGTAAGAAACCG 58.500 36.000 0.00 0.00 0.00 4.44
124 125 7.712797 TCTCAAATTGGACAAAGTAAGAAACC 58.287 34.615 0.00 0.00 0.00 3.27
491 492 7.765307 ACACAAAGTAAGAATCAGCATATTGG 58.235 34.615 0.00 0.00 0.00 3.16
492 493 9.630098 AAACACAAAGTAAGAATCAGCATATTG 57.370 29.630 0.00 0.00 0.00 1.90
494 495 9.630098 CAAAACACAAAGTAAGAATCAGCATAT 57.370 29.630 0.00 0.00 0.00 1.78
495 496 7.594758 GCAAAACACAAAGTAAGAATCAGCATA 59.405 33.333 0.00 0.00 0.00 3.14
496 497 6.421801 GCAAAACACAAAGTAAGAATCAGCAT 59.578 34.615 0.00 0.00 0.00 3.79
497 498 5.748152 GCAAAACACAAAGTAAGAATCAGCA 59.252 36.000 0.00 0.00 0.00 4.41
498 499 5.175673 GGCAAAACACAAAGTAAGAATCAGC 59.824 40.000 0.00 0.00 0.00 4.26
499 500 6.507023 AGGCAAAACACAAAGTAAGAATCAG 58.493 36.000 0.00 0.00 0.00 2.90
500 501 6.463995 AGGCAAAACACAAAGTAAGAATCA 57.536 33.333 0.00 0.00 0.00 2.57
501 502 5.625311 CGAGGCAAAACACAAAGTAAGAATC 59.375 40.000 0.00 0.00 0.00 2.52
502 503 5.507315 CCGAGGCAAAACACAAAGTAAGAAT 60.507 40.000 0.00 0.00 0.00 2.40
503 504 4.201970 CCGAGGCAAAACACAAAGTAAGAA 60.202 41.667 0.00 0.00 0.00 2.52
504 505 3.314080 CCGAGGCAAAACACAAAGTAAGA 59.686 43.478 0.00 0.00 0.00 2.10
505 506 3.628017 CCGAGGCAAAACACAAAGTAAG 58.372 45.455 0.00 0.00 0.00 2.34
506 507 2.223618 GCCGAGGCAAAACACAAAGTAA 60.224 45.455 9.58 0.00 41.49 2.24
507 508 1.335496 GCCGAGGCAAAACACAAAGTA 59.665 47.619 9.58 0.00 41.49 2.24
508 509 0.102300 GCCGAGGCAAAACACAAAGT 59.898 50.000 9.58 0.00 41.49 2.66
509 510 0.597377 GGCCGAGGCAAAACACAAAG 60.597 55.000 16.65 0.00 44.11 2.77
510 511 1.439644 GGCCGAGGCAAAACACAAA 59.560 52.632 16.65 0.00 44.11 2.83
511 512 2.840066 CGGCCGAGGCAAAACACAA 61.840 57.895 24.07 0.00 44.11 3.33
512 513 3.283684 CGGCCGAGGCAAAACACA 61.284 61.111 24.07 0.00 44.11 3.72
513 514 2.344521 AAACGGCCGAGGCAAAACAC 62.345 55.000 35.90 0.00 44.11 3.32
514 515 1.668101 AAAACGGCCGAGGCAAAACA 61.668 50.000 35.90 0.00 44.11 2.83
515 516 0.528901 AAAAACGGCCGAGGCAAAAC 60.529 50.000 35.90 0.00 44.11 2.43
516 517 0.528684 CAAAAACGGCCGAGGCAAAA 60.529 50.000 35.90 0.00 44.11 2.44
517 518 1.066587 CAAAAACGGCCGAGGCAAA 59.933 52.632 35.90 0.00 44.11 3.68
518 519 2.065906 GACAAAAACGGCCGAGGCAA 62.066 55.000 35.90 0.00 44.11 4.52
519 520 2.517402 ACAAAAACGGCCGAGGCA 60.517 55.556 35.90 0.00 44.11 4.75
520 521 2.254350 GACAAAAACGGCCGAGGC 59.746 61.111 35.90 14.30 41.06 4.70
521 522 1.500512 TTCGACAAAAACGGCCGAGG 61.501 55.000 35.90 17.67 0.00 4.63
522 523 0.305313 TTTCGACAAAAACGGCCGAG 59.695 50.000 35.90 17.62 0.00 4.63
523 524 0.945813 ATTTCGACAAAAACGGCCGA 59.054 45.000 35.90 4.26 0.00 5.54
524 525 1.323791 GATTTCGACAAAAACGGCCG 58.676 50.000 26.86 26.86 0.00 6.13
525 526 2.048498 GTGATTTCGACAAAAACGGCC 58.952 47.619 0.00 0.00 0.00 6.13
526 527 2.994849 AGTGATTTCGACAAAAACGGC 58.005 42.857 0.00 0.00 0.00 5.68
527 528 5.338614 ACTAGTGATTTCGACAAAAACGG 57.661 39.130 0.00 0.00 0.00 4.44
528 529 6.415702 TCAACTAGTGATTTCGACAAAAACG 58.584 36.000 0.00 0.00 0.00 3.60
529 530 6.851330 CCTCAACTAGTGATTTCGACAAAAAC 59.149 38.462 0.00 0.00 35.07 2.43
530 531 6.764085 TCCTCAACTAGTGATTTCGACAAAAA 59.236 34.615 0.00 0.00 35.07 1.94
531 532 6.285224 TCCTCAACTAGTGATTTCGACAAAA 58.715 36.000 0.00 0.00 35.07 2.44
532 533 5.849510 TCCTCAACTAGTGATTTCGACAAA 58.150 37.500 0.00 0.00 35.07 2.83
533 534 5.010719 ACTCCTCAACTAGTGATTTCGACAA 59.989 40.000 0.00 0.00 35.07 3.18
534 535 4.523173 ACTCCTCAACTAGTGATTTCGACA 59.477 41.667 0.00 0.00 35.07 4.35
535 536 5.061920 ACTCCTCAACTAGTGATTTCGAC 57.938 43.478 0.00 0.00 35.07 4.20
536 537 5.944599 AGTACTCCTCAACTAGTGATTTCGA 59.055 40.000 0.00 0.00 35.07 3.71
537 538 6.197364 AGTACTCCTCAACTAGTGATTTCG 57.803 41.667 0.00 0.00 35.07 3.46
538 539 6.127952 ACGAGTACTCCTCAACTAGTGATTTC 60.128 42.308 17.23 0.00 40.48 2.17
539 540 5.711036 ACGAGTACTCCTCAACTAGTGATTT 59.289 40.000 17.23 0.00 40.48 2.17
540 541 5.254901 ACGAGTACTCCTCAACTAGTGATT 58.745 41.667 17.23 0.00 40.48 2.57
541 542 4.846040 ACGAGTACTCCTCAACTAGTGAT 58.154 43.478 17.23 0.00 40.48 3.06
542 543 4.283363 ACGAGTACTCCTCAACTAGTGA 57.717 45.455 17.23 0.00 40.48 3.41
543 544 4.724303 CAACGAGTACTCCTCAACTAGTG 58.276 47.826 17.23 1.71 40.48 2.74
544 545 3.190953 GCAACGAGTACTCCTCAACTAGT 59.809 47.826 17.23 3.77 40.48 2.57
545 546 3.190744 TGCAACGAGTACTCCTCAACTAG 59.809 47.826 17.23 3.13 40.48 2.57
546 547 3.151554 TGCAACGAGTACTCCTCAACTA 58.848 45.455 17.23 0.00 40.48 2.24
547 548 1.961394 TGCAACGAGTACTCCTCAACT 59.039 47.619 17.23 0.00 40.48 3.16
548 549 2.433868 TGCAACGAGTACTCCTCAAC 57.566 50.000 17.23 4.22 40.48 3.18
549 550 3.462483 TTTGCAACGAGTACTCCTCAA 57.538 42.857 17.23 12.14 40.48 3.02
550 551 3.069016 TCTTTTGCAACGAGTACTCCTCA 59.931 43.478 17.23 7.05 40.48 3.86
551 552 3.650139 TCTTTTGCAACGAGTACTCCTC 58.350 45.455 17.23 4.60 36.80 3.71
552 553 3.746045 TCTTTTGCAACGAGTACTCCT 57.254 42.857 17.23 2.73 0.00 3.69
553 554 5.638234 AGTAATCTTTTGCAACGAGTACTCC 59.362 40.000 22.37 3.69 34.61 3.85
554 555 6.183360 GGAGTAATCTTTTGCAACGAGTACTC 60.183 42.308 32.18 32.18 46.40 2.59
555 556 5.638234 GGAGTAATCTTTTGCAACGAGTACT 59.362 40.000 25.61 25.61 40.11 2.73
556 557 5.407387 TGGAGTAATCTTTTGCAACGAGTAC 59.593 40.000 19.74 19.74 0.00 2.73
557 558 5.543714 TGGAGTAATCTTTTGCAACGAGTA 58.456 37.500 0.00 0.00 0.00 2.59
558 559 4.385825 TGGAGTAATCTTTTGCAACGAGT 58.614 39.130 0.00 0.45 0.00 4.18
559 560 5.147162 GTTGGAGTAATCTTTTGCAACGAG 58.853 41.667 0.00 0.00 34.36 4.18
560 561 4.023536 GGTTGGAGTAATCTTTTGCAACGA 60.024 41.667 0.00 0.00 42.01 3.85
561 562 4.023193 AGGTTGGAGTAATCTTTTGCAACG 60.023 41.667 0.00 0.00 42.01 4.10
562 563 5.453567 AGGTTGGAGTAATCTTTTGCAAC 57.546 39.130 0.00 0.00 40.87 4.17
563 564 5.278266 CGAAGGTTGGAGTAATCTTTTGCAA 60.278 40.000 0.00 0.00 39.80 4.08
564 565 4.215399 CGAAGGTTGGAGTAATCTTTTGCA 59.785 41.667 0.00 0.00 39.80 4.08
565 566 4.723248 CGAAGGTTGGAGTAATCTTTTGC 58.277 43.478 0.00 0.00 39.80 3.68
566 567 4.215399 TGCGAAGGTTGGAGTAATCTTTTG 59.785 41.667 0.00 0.00 39.80 2.44
567 568 4.394729 TGCGAAGGTTGGAGTAATCTTTT 58.605 39.130 0.00 0.00 39.80 2.27
568 569 4.003648 CTGCGAAGGTTGGAGTAATCTTT 58.996 43.478 0.00 0.00 39.80 2.52
569 570 3.600388 CTGCGAAGGTTGGAGTAATCTT 58.400 45.455 0.00 0.00 42.37 2.40
570 571 2.093447 CCTGCGAAGGTTGGAGTAATCT 60.093 50.000 0.00 0.00 0.00 2.40
571 572 2.280628 CCTGCGAAGGTTGGAGTAATC 58.719 52.381 0.00 0.00 0.00 1.75
572 573 1.679032 GCCTGCGAAGGTTGGAGTAAT 60.679 52.381 12.24 0.00 0.00 1.89
573 574 0.321298 GCCTGCGAAGGTTGGAGTAA 60.321 55.000 12.24 0.00 0.00 2.24
574 575 1.192146 AGCCTGCGAAGGTTGGAGTA 61.192 55.000 12.24 0.00 0.00 2.59
575 576 1.192146 TAGCCTGCGAAGGTTGGAGT 61.192 55.000 12.24 0.00 0.00 3.85
576 577 0.179000 ATAGCCTGCGAAGGTTGGAG 59.821 55.000 12.24 0.00 0.00 3.86
577 578 0.107703 CATAGCCTGCGAAGGTTGGA 60.108 55.000 12.24 0.00 0.00 3.53
578 579 0.107703 TCATAGCCTGCGAAGGTTGG 60.108 55.000 12.24 2.17 0.00 3.77
579 580 1.009829 GTCATAGCCTGCGAAGGTTG 58.990 55.000 12.24 7.06 0.00 3.77
580 581 0.460284 CGTCATAGCCTGCGAAGGTT 60.460 55.000 12.24 7.89 0.00 3.50
581 582 1.141881 CGTCATAGCCTGCGAAGGT 59.858 57.895 12.24 0.06 0.00 3.50
582 583 0.179111 TTCGTCATAGCCTGCGAAGG 60.179 55.000 4.49 4.49 37.97 3.46
583 584 1.789464 GATTCGTCATAGCCTGCGAAG 59.211 52.381 15.57 0.00 42.38 3.79
584 585 1.409064 AGATTCGTCATAGCCTGCGAA 59.591 47.619 13.93 13.93 42.86 4.70
585 586 1.032794 AGATTCGTCATAGCCTGCGA 58.967 50.000 0.00 0.00 33.59 5.10
586 587 1.858091 AAGATTCGTCATAGCCTGCG 58.142 50.000 0.00 0.00 0.00 5.18
587 588 5.050490 TCTTTAAGATTCGTCATAGCCTGC 58.950 41.667 0.00 0.00 0.00 4.85
588 589 7.721286 AATCTTTAAGATTCGTCATAGCCTG 57.279 36.000 13.82 0.00 40.75 4.85
593 594 9.554395 TGCCATAAATCTTTAAGATTCGTCATA 57.446 29.630 18.97 9.04 43.67 2.15
594 595 8.450578 TGCCATAAATCTTTAAGATTCGTCAT 57.549 30.769 18.97 7.25 43.67 3.06
595 596 7.857734 TGCCATAAATCTTTAAGATTCGTCA 57.142 32.000 18.97 10.78 43.67 4.35
596 597 9.736023 AATTGCCATAAATCTTTAAGATTCGTC 57.264 29.630 18.97 8.77 43.67 4.20
628 629 9.542462 GCTTGGTAAGTGATGTAGTATTATTGA 57.458 33.333 0.00 0.00 0.00 2.57
629 630 9.547753 AGCTTGGTAAGTGATGTAGTATTATTG 57.452 33.333 0.00 0.00 0.00 1.90
630 631 9.547753 CAGCTTGGTAAGTGATGTAGTATTATT 57.452 33.333 0.00 0.00 0.00 1.40
631 632 8.924303 TCAGCTTGGTAAGTGATGTAGTATTAT 58.076 33.333 0.00 0.00 0.00 1.28
632 633 8.301252 TCAGCTTGGTAAGTGATGTAGTATTA 57.699 34.615 0.00 0.00 0.00 0.98
633 634 7.182817 TCAGCTTGGTAAGTGATGTAGTATT 57.817 36.000 0.00 0.00 0.00 1.89
634 635 6.791867 TCAGCTTGGTAAGTGATGTAGTAT 57.208 37.500 0.00 0.00 0.00 2.12
635 636 6.406961 CCATCAGCTTGGTAAGTGATGTAGTA 60.407 42.308 20.01 0.00 40.90 1.82
636 637 5.423015 CATCAGCTTGGTAAGTGATGTAGT 58.577 41.667 16.85 0.00 39.48 2.73
637 638 4.813161 CCATCAGCTTGGTAAGTGATGTAG 59.187 45.833 20.01 10.79 40.90 2.74
638 639 4.469586 TCCATCAGCTTGGTAAGTGATGTA 59.530 41.667 20.01 10.90 40.90 2.29
639 640 3.264193 TCCATCAGCTTGGTAAGTGATGT 59.736 43.478 20.01 1.05 40.90 3.06
640 641 3.877559 TCCATCAGCTTGGTAAGTGATG 58.122 45.455 17.50 17.50 41.45 3.07
641 642 4.785346 ATCCATCAGCTTGGTAAGTGAT 57.215 40.909 4.36 0.00 38.01 3.06
642 643 4.019411 TGAATCCATCAGCTTGGTAAGTGA 60.019 41.667 4.36 0.00 38.01 3.41
643 644 4.264253 TGAATCCATCAGCTTGGTAAGTG 58.736 43.478 4.36 0.00 38.01 3.16
644 645 4.574674 TGAATCCATCAGCTTGGTAAGT 57.425 40.909 4.36 0.00 38.01 2.24
645 646 4.337555 CCTTGAATCCATCAGCTTGGTAAG 59.662 45.833 4.36 5.74 39.77 2.34
646 647 4.272489 CCTTGAATCCATCAGCTTGGTAA 58.728 43.478 4.36 0.00 39.77 2.85
647 648 3.371917 CCCTTGAATCCATCAGCTTGGTA 60.372 47.826 4.36 0.00 39.77 3.25
648 649 2.622452 CCCTTGAATCCATCAGCTTGGT 60.622 50.000 4.36 0.00 39.77 3.67
649 650 2.029623 CCCTTGAATCCATCAGCTTGG 58.970 52.381 0.00 0.00 39.77 3.61
650 651 2.686915 GTCCCTTGAATCCATCAGCTTG 59.313 50.000 0.00 0.00 39.77 4.01
651 652 2.681976 CGTCCCTTGAATCCATCAGCTT 60.682 50.000 0.00 0.00 39.77 3.74
666 667 1.698506 GAGAGTGATGGATCGTCCCT 58.301 55.000 2.23 0.00 35.03 4.20
670 671 2.356382 GACTTCGAGAGTGATGGATCGT 59.644 50.000 5.20 0.00 39.19 3.73
713 714 4.283212 ACAGAAGATCATAAGCCTAGAGCC 59.717 45.833 0.00 0.00 45.47 4.70
904 916 4.680237 CGTGGCGCAGGTGGAAGA 62.680 66.667 10.83 0.00 0.00 2.87
957 981 5.754782 TGGTTATATATGTGCATGGGGATC 58.245 41.667 0.00 0.00 0.00 3.36
961 985 4.592942 AGCTGGTTATATATGTGCATGGG 58.407 43.478 0.00 0.00 0.00 4.00
1010 1035 2.313317 AGTAGTTCGTGTGTGGAAGGA 58.687 47.619 0.00 0.00 0.00 3.36
1011 1036 2.814280 AGTAGTTCGTGTGTGGAAGG 57.186 50.000 0.00 0.00 0.00 3.46
1012 1037 4.233123 TGTAGTAGTTCGTGTGTGGAAG 57.767 45.455 0.00 0.00 0.00 3.46
1013 1038 4.362279 GTTGTAGTAGTTCGTGTGTGGAA 58.638 43.478 0.00 0.00 0.00 3.53
1014 1039 3.548616 CGTTGTAGTAGTTCGTGTGTGGA 60.549 47.826 0.00 0.00 0.00 4.02
1029 1054 5.700846 AGTGATGTGAAGTAGTCGTTGTAG 58.299 41.667 0.00 0.00 0.00 2.74
1030 1055 5.700722 AGTGATGTGAAGTAGTCGTTGTA 57.299 39.130 0.00 0.00 0.00 2.41
1031 1056 4.585955 AGTGATGTGAAGTAGTCGTTGT 57.414 40.909 0.00 0.00 0.00 3.32
1032 1057 4.982295 TGAAGTGATGTGAAGTAGTCGTTG 59.018 41.667 0.00 0.00 0.00 4.10
1033 1058 4.982916 GTGAAGTGATGTGAAGTAGTCGTT 59.017 41.667 0.00 0.00 0.00 3.85
1034 1059 4.547532 GTGAAGTGATGTGAAGTAGTCGT 58.452 43.478 0.00 0.00 0.00 4.34
1035 1060 3.921021 GGTGAAGTGATGTGAAGTAGTCG 59.079 47.826 0.00 0.00 0.00 4.18
1036 1061 3.921021 CGGTGAAGTGATGTGAAGTAGTC 59.079 47.826 0.00 0.00 0.00 2.59
1037 1062 3.861131 GCGGTGAAGTGATGTGAAGTAGT 60.861 47.826 0.00 0.00 0.00 2.73
1118 1143 6.938507 TGAAGGTACAAGTGATTATTACCGT 58.061 36.000 0.00 0.00 37.80 4.83
1120 1145 6.260271 GGCTGAAGGTACAAGTGATTATTACC 59.740 42.308 0.00 0.00 33.63 2.85
1169 1200 2.976903 GATCGCAGGCCTCCATGC 60.977 66.667 0.00 2.67 39.09 4.06
1232 1263 4.222847 GGTCCGACCGATGCTCCC 62.223 72.222 0.65 0.00 0.00 4.30
1555 1592 3.878667 CGGCCCATCCCCTTCCTC 61.879 72.222 0.00 0.00 0.00 3.71
1556 1593 3.341469 TACGGCCCATCCCCTTCCT 62.341 63.158 0.00 0.00 0.00 3.36
1557 1594 2.770904 TACGGCCCATCCCCTTCC 60.771 66.667 0.00 0.00 0.00 3.46
1745 1782 3.934391 AAGAAGCGCCTCCCGTTCG 62.934 63.158 2.29 0.00 39.71 3.95
1747 1784 1.255667 TAGAAGAAGCGCCTCCCGTT 61.256 55.000 2.29 0.00 39.71 4.44
1748 1785 1.681327 TAGAAGAAGCGCCTCCCGT 60.681 57.895 2.29 0.00 39.71 5.28
1749 1786 1.227002 GTAGAAGAAGCGCCTCCCG 60.227 63.158 2.29 0.00 40.75 5.14
2103 2146 3.027170 GCTGTCAATGGCGGTCGTG 62.027 63.158 0.00 0.00 0.00 4.35
2104 2147 2.742372 GCTGTCAATGGCGGTCGT 60.742 61.111 0.00 0.00 0.00 4.34
2106 2149 1.723870 GATGCTGTCAATGGCGGTC 59.276 57.895 0.00 0.00 0.00 4.79
2109 2152 1.061411 CACGATGCTGTCAATGGCG 59.939 57.895 0.00 0.00 0.00 5.69
2167 2219 0.105964 CTCTGGTCCACCACGTTCAA 59.894 55.000 0.00 0.00 42.01 2.69
2199 2251 0.388659 AGCTGAGACCATCGAGCATC 59.611 55.000 0.00 0.00 35.66 3.91
2295 2347 0.250234 CCAAGAGGTCGAAGCCATCA 59.750 55.000 0.00 0.00 0.00 3.07
2396 2474 7.973402 AGTGCTCCCTTTGGTTTAAAATTAAT 58.027 30.769 0.00 0.00 0.00 1.40
2402 2480 3.824443 GCTAGTGCTCCCTTTGGTTTAAA 59.176 43.478 0.00 0.00 36.03 1.52
2413 2491 1.078214 TGTGCATGCTAGTGCTCCC 60.078 57.895 20.33 0.00 45.27 4.30
2414 2492 1.712977 GCTGTGCATGCTAGTGCTCC 61.713 60.000 20.33 0.90 45.27 4.70
2416 2494 0.607217 TTGCTGTGCATGCTAGTGCT 60.607 50.000 20.33 0.00 45.27 4.40
2440 2521 5.666969 TGTCTAATCCGTTCAACAGTTTG 57.333 39.130 0.00 0.00 0.00 2.93
2560 2655 5.434182 TGGATCAATGTACAGTTGGATCA 57.566 39.130 19.24 11.52 0.00 2.92
2568 2663 4.005650 AGTGCAGTTGGATCAATGTACAG 58.994 43.478 0.33 0.00 31.63 2.74
2635 2735 1.191489 AATTTCCCCAGCCAAACCCG 61.191 55.000 0.00 0.00 0.00 5.28
2636 2736 1.064003 AAATTTCCCCAGCCAAACCC 58.936 50.000 0.00 0.00 0.00 4.11
2637 2737 1.271325 CCAAATTTCCCCAGCCAAACC 60.271 52.381 0.00 0.00 0.00 3.27
2638 2738 1.271325 CCCAAATTTCCCCAGCCAAAC 60.271 52.381 0.00 0.00 0.00 2.93
2639 2739 1.063183 CCCAAATTTCCCCAGCCAAA 58.937 50.000 0.00 0.00 0.00 3.28
2640 2740 0.192064 TCCCAAATTTCCCCAGCCAA 59.808 50.000 0.00 0.00 0.00 4.52
2648 2748 3.321968 ACTGAAGCAAGTCCCAAATTTCC 59.678 43.478 0.00 0.00 0.00 3.13
2652 2752 2.036346 GCAACTGAAGCAAGTCCCAAAT 59.964 45.455 0.00 0.00 0.00 2.32
2681 2781 1.675483 TGTTGTGCCAGTTGACACATC 59.325 47.619 2.12 2.94 45.59 3.06
2682 2782 1.761449 TGTTGTGCCAGTTGACACAT 58.239 45.000 2.12 0.00 45.59 3.21
2684 2784 2.869233 AATGTTGTGCCAGTTGACAC 57.131 45.000 0.00 0.00 37.31 3.67
2685 2785 6.264292 ACTTAATAATGTTGTGCCAGTTGACA 59.736 34.615 0.00 0.00 0.00 3.58
2686 2786 6.677913 ACTTAATAATGTTGTGCCAGTTGAC 58.322 36.000 0.00 0.00 0.00 3.18
2687 2787 6.892658 ACTTAATAATGTTGTGCCAGTTGA 57.107 33.333 0.00 0.00 0.00 3.18
2688 2788 7.816640 AGTACTTAATAATGTTGTGCCAGTTG 58.183 34.615 0.00 0.00 0.00 3.16
2689 2789 7.120726 GGAGTACTTAATAATGTTGTGCCAGTT 59.879 37.037 0.00 0.00 0.00 3.16
2690 2790 6.598064 GGAGTACTTAATAATGTTGTGCCAGT 59.402 38.462 0.00 0.00 0.00 4.00
2691 2791 6.038271 GGGAGTACTTAATAATGTTGTGCCAG 59.962 42.308 0.00 0.00 0.00 4.85
2692 2792 5.883673 GGGAGTACTTAATAATGTTGTGCCA 59.116 40.000 0.00 0.00 0.00 4.92
2693 2793 6.120220 AGGGAGTACTTAATAATGTTGTGCC 58.880 40.000 0.00 0.00 0.00 5.01
2694 2794 7.011482 CAGAGGGAGTACTTAATAATGTTGTGC 59.989 40.741 0.00 0.00 0.00 4.57
2695 2795 8.041323 ACAGAGGGAGTACTTAATAATGTTGTG 58.959 37.037 0.00 0.00 0.00 3.33
2696 2796 8.147244 ACAGAGGGAGTACTTAATAATGTTGT 57.853 34.615 0.00 0.00 0.00 3.32
2697 2797 9.449719 AAACAGAGGGAGTACTTAATAATGTTG 57.550 33.333 0.00 0.00 0.00 3.33
2698 2798 9.668497 GAAACAGAGGGAGTACTTAATAATGTT 57.332 33.333 0.00 2.45 0.00 2.71
2699 2799 8.822805 TGAAACAGAGGGAGTACTTAATAATGT 58.177 33.333 0.00 0.00 0.00 2.71
2700 2800 9.838339 ATGAAACAGAGGGAGTACTTAATAATG 57.162 33.333 0.00 0.00 0.00 1.90
2704 2804 9.838339 CATTATGAAACAGAGGGAGTACTTAAT 57.162 33.333 0.00 0.00 0.00 1.40
2705 2805 8.822805 ACATTATGAAACAGAGGGAGTACTTAA 58.177 33.333 0.00 0.00 0.00 1.85
2706 2806 8.375493 ACATTATGAAACAGAGGGAGTACTTA 57.625 34.615 0.00 0.00 0.00 2.24
2707 2807 7.259088 ACATTATGAAACAGAGGGAGTACTT 57.741 36.000 0.00 0.00 0.00 2.24
2708 2808 6.875972 ACATTATGAAACAGAGGGAGTACT 57.124 37.500 0.00 0.00 0.00 2.73
2709 2809 8.475639 TCTTACATTATGAAACAGAGGGAGTAC 58.524 37.037 0.00 0.00 0.00 2.73
2710 2810 8.475639 GTCTTACATTATGAAACAGAGGGAGTA 58.524 37.037 0.00 0.00 0.00 2.59
2711 2811 7.331791 GTCTTACATTATGAAACAGAGGGAGT 58.668 38.462 0.00 0.00 0.00 3.85
2712 2812 6.477033 CGTCTTACATTATGAAACAGAGGGAG 59.523 42.308 0.00 0.00 0.00 4.30
2713 2813 6.070995 ACGTCTTACATTATGAAACAGAGGGA 60.071 38.462 0.00 0.00 0.00 4.20
2714 2814 6.106673 ACGTCTTACATTATGAAACAGAGGG 58.893 40.000 0.00 0.00 0.00 4.30
2715 2815 7.596749 AACGTCTTACATTATGAAACAGAGG 57.403 36.000 0.00 3.21 0.00 3.69
2716 2816 9.878599 AAAAACGTCTTACATTATGAAACAGAG 57.121 29.630 0.00 0.00 0.00 3.35
2762 2862 9.471084 CCCTCGTTTCATAATGTAAAACTTTTT 57.529 29.630 0.00 0.00 32.11 1.94
2763 2863 8.085909 CCCCTCGTTTCATAATGTAAAACTTTT 58.914 33.333 0.00 0.00 32.11 2.27
2764 2864 7.449086 TCCCCTCGTTTCATAATGTAAAACTTT 59.551 33.333 0.00 0.00 32.11 2.66
2765 2865 6.943718 TCCCCTCGTTTCATAATGTAAAACTT 59.056 34.615 0.00 0.00 32.11 2.66
2766 2866 6.478129 TCCCCTCGTTTCATAATGTAAAACT 58.522 36.000 0.00 0.00 32.11 2.66
2767 2867 6.373495 ACTCCCCTCGTTTCATAATGTAAAAC 59.627 38.462 0.00 0.00 0.00 2.43
2768 2868 6.478129 ACTCCCCTCGTTTCATAATGTAAAA 58.522 36.000 0.00 0.00 0.00 1.52
2769 2869 6.057321 ACTCCCCTCGTTTCATAATGTAAA 57.943 37.500 0.00 0.00 0.00 2.01
2770 2870 5.687166 ACTCCCCTCGTTTCATAATGTAA 57.313 39.130 0.00 0.00 0.00 2.41
2771 2871 5.895534 ACTACTCCCCTCGTTTCATAATGTA 59.104 40.000 0.00 0.00 0.00 2.29
2772 2872 4.715297 ACTACTCCCCTCGTTTCATAATGT 59.285 41.667 0.00 0.00 0.00 2.71
2773 2873 5.277857 ACTACTCCCCTCGTTTCATAATG 57.722 43.478 0.00 0.00 0.00 1.90
2774 2874 5.424252 TGAACTACTCCCCTCGTTTCATAAT 59.576 40.000 0.00 0.00 0.00 1.28
2775 2875 4.773674 TGAACTACTCCCCTCGTTTCATAA 59.226 41.667 0.00 0.00 0.00 1.90
2776 2876 4.346730 TGAACTACTCCCCTCGTTTCATA 58.653 43.478 0.00 0.00 0.00 2.15
2777 2877 3.170717 TGAACTACTCCCCTCGTTTCAT 58.829 45.455 0.00 0.00 0.00 2.57
2778 2878 2.561419 CTGAACTACTCCCCTCGTTTCA 59.439 50.000 0.00 0.00 0.00 2.69
2779 2879 2.824341 TCTGAACTACTCCCCTCGTTTC 59.176 50.000 0.00 0.00 0.00 2.78
2780 2880 2.826725 CTCTGAACTACTCCCCTCGTTT 59.173 50.000 0.00 0.00 0.00 3.60
2781 2881 2.448453 CTCTGAACTACTCCCCTCGTT 58.552 52.381 0.00 0.00 0.00 3.85
2782 2882 1.341187 CCTCTGAACTACTCCCCTCGT 60.341 57.143 0.00 0.00 0.00 4.18
2783 2883 1.341187 ACCTCTGAACTACTCCCCTCG 60.341 57.143 0.00 0.00 0.00 4.63
2784 2884 2.291670 TGACCTCTGAACTACTCCCCTC 60.292 54.545 0.00 0.00 0.00 4.30
2785 2885 1.717077 TGACCTCTGAACTACTCCCCT 59.283 52.381 0.00 0.00 0.00 4.79
2786 2886 2.104170 CTGACCTCTGAACTACTCCCC 58.896 57.143 0.00 0.00 0.00 4.81
2787 2887 2.756207 GTCTGACCTCTGAACTACTCCC 59.244 54.545 0.00 0.00 0.00 4.30
2788 2888 3.692690 AGTCTGACCTCTGAACTACTCC 58.307 50.000 3.76 0.00 0.00 3.85
2789 2889 4.157105 GGAAGTCTGACCTCTGAACTACTC 59.843 50.000 3.76 0.00 0.00 2.59
2852 2955 4.638865 TGCATAACTCTAGTCGCTGTAGAA 59.361 41.667 0.00 0.00 0.00 2.10
2854 2957 4.553756 TGCATAACTCTAGTCGCTGTAG 57.446 45.455 0.00 0.00 0.00 2.74
2860 2963 7.295952 ACTTGAAATTGCATAACTCTAGTCG 57.704 36.000 0.00 0.00 0.00 4.18
2907 3010 6.033619 CGTCTTGTATTCGTTTACAGAGGAAG 59.966 42.308 1.65 0.00 33.81 3.46
2908 3011 5.860182 CGTCTTGTATTCGTTTACAGAGGAA 59.140 40.000 1.65 0.00 33.81 3.36
2921 3025 6.056428 AGTGACCAAAAACGTCTTGTATTC 57.944 37.500 8.91 4.27 0.00 1.75
2924 3028 6.455380 CGTTTAGTGACCAAAAACGTCTTGTA 60.455 38.462 15.56 0.00 46.24 2.41
2925 3029 5.633927 GTTTAGTGACCAAAAACGTCTTGT 58.366 37.500 8.91 0.00 0.00 3.16
2926 3030 4.726704 CGTTTAGTGACCAAAAACGTCTTG 59.273 41.667 15.56 0.00 46.24 3.02
2927 3031 4.900664 CGTTTAGTGACCAAAAACGTCTT 58.099 39.130 15.56 0.00 46.24 3.01
2928 3032 4.525411 CGTTTAGTGACCAAAAACGTCT 57.475 40.909 15.56 0.00 46.24 4.18
2932 3036 9.750882 GATATAAGACGTTTAGTGACCAAAAAC 57.249 33.333 0.00 0.00 0.00 2.43
2933 3037 9.491675 TGATATAAGACGTTTAGTGACCAAAAA 57.508 29.630 0.00 0.00 0.00 1.94
2934 3038 8.928733 GTGATATAAGACGTTTAGTGACCAAAA 58.071 33.333 0.00 0.00 0.00 2.44
2935 3039 8.308931 AGTGATATAAGACGTTTAGTGACCAAA 58.691 33.333 0.00 0.00 0.00 3.28
2936 3040 7.833786 AGTGATATAAGACGTTTAGTGACCAA 58.166 34.615 0.00 0.00 0.00 3.67
2937 3041 7.400599 AGTGATATAAGACGTTTAGTGACCA 57.599 36.000 0.00 0.00 0.00 4.02
2938 3042 8.834465 TCTAGTGATATAAGACGTTTAGTGACC 58.166 37.037 0.00 0.00 0.00 4.02
2939 3043 9.866936 CTCTAGTGATATAAGACGTTTAGTGAC 57.133 37.037 0.00 0.00 0.00 3.67
2940 3044 9.610705 ACTCTAGTGATATAAGACGTTTAGTGA 57.389 33.333 0.00 0.00 0.00 3.41
2952 3056 9.908747 GGGAGCTTAGATACTCTAGTGATATAA 57.091 37.037 0.00 0.00 33.29 0.98
3043 3147 2.152016 GGCAAAGAGTACCACAAGTCC 58.848 52.381 0.00 0.00 0.00 3.85
3154 3262 8.336806 CACCGTGTTAGAAAACTAAATGTACAA 58.663 33.333 0.00 0.00 36.51 2.41
3180 3290 2.121116 ATATGAGCGCGTGTGTCTAC 57.879 50.000 8.43 0.00 0.00 2.59
3181 3291 2.614983 TGTATATGAGCGCGTGTGTCTA 59.385 45.455 8.43 0.00 0.00 2.59
3189 3299 1.206115 TGCGTGTGTATATGAGCGCG 61.206 55.000 0.00 0.00 46.55 6.86
3261 3376 3.067320 TGATATGTTGGCTCAGTCTCTCG 59.933 47.826 0.00 0.00 0.00 4.04
3285 3400 7.770897 ACCTATAGTGATTTTGTCAATCTCACC 59.229 37.037 17.81 6.78 38.90 4.02
3320 3435 0.312416 GAGATGACGTCCCCATCGAG 59.688 60.000 14.12 0.00 43.73 4.04
3378 3493 5.663456 AGTACCGGTATTCGCATTTTTCTA 58.337 37.500 19.19 0.00 37.59 2.10
3418 3533 5.724370 TGATTAGGAGGACAGTGGTATTTCA 59.276 40.000 0.00 0.00 0.00 2.69
3478 3722 5.371769 GGTAACCCATTCTTTCCCTATACCT 59.628 44.000 0.00 0.00 0.00 3.08


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.